CmaCh09G005780 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G005780
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Integrase catalytic domain-containing protein
Location	Cma_Chr09: 2646124 .. 2648326 (-)
RNA-Seq Expression	CmaCh09G005780
Synteny	CmaCh09G005780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAGAAATTATAGCCTTGGAGCATAATCAAACTTGGGAACTAGTGCCAAGACTAGGAGATATCAAACCCGTCTCTTGCAAGTGGGTCTATAAAATAAAGCGTCGACCGGATGGATCAATCGAGAGATACAAGGCTCGACTTGTGGCTCGAGGATTTTCTCAACAATATGGACTAGATTATGATGAAACATTCAGTCCAGTGGCAAAGATTACTACCGTACGAGTTCTGCTAGCACTCGCAGCAAGTAAAGATTGGAAACTGTGGCAAATGGATGTGAAGAATGCCTTCTTGCACGGAGAGCTAGACAGGGAGATTTATATGAACCAACCAAAGGGATTTGAGAGTGCAGCTAATCCTAATTATGTATGCAAGCTTAGAAAAGCTCTTTATGGACTGAAACAAGCACCGAGAGCTTGGTATGGTAAGATTGCTGAATTTCTTACCCAAAGTGGTTATTCAGTTGCGCATGCAGACTCAAGCCTATTCATCAAAGAAAGAGAAGGAAATTTGACAATTGTGTTGGTCTACGTGGACGATTTGATTATCACCGGGGACGATGAAAGAGAAATTTATCAAACAAGAGAAAATTTATCAATACGCTTTCAGATGAAAGAGCTAGGAGAGCTTAAACACTTCTTAGGCCTAGAAGTTGATCGCACAGATGAAGGACTGTTTCTCTGCCAACAAAAGTATACCAGAGACATGCTTCAGAAGTTCAACATGTTAGAGTGCAAGCAAGTTTCAACACCGATGGAGATAAATGCCAAGATTTGTGCACATGAAGGCAAAGAGTTGAACGATGAAACAACGTACCGACAACTAGTAGGTAGTCTTATCTACCTAACTTTAACTCGACCTGATATCTCGTATGCAGTTGGGGTTATGAGTCGATACATGCAAAGTCCAAAGAAGCCTTATCTGGATGCAGCTCGACGGATCTTGAGATATATCAAAGGTACAATCGACTATGGTCTTTTGTACAAAAGAAGCAAAGACTGCAAGCTAGTTGGATACTGTGATGCTGACTATGCAGGAGACCACGATACTCGGAGGTCAACCACTGGGTATGTGTTCAAGTTTGGTTCGGGAACAATTTCTTGGTGTAGCAAGAGACAACCAACAGTATCATTATCAACTACAGAAGCAGAGTATAGAGCAGCGGCTGGAGCAGCCCAGGAAAGTACATGGCTAAAACTCTTGATGGAAGATTTGCACCAGAAAATTGACTATCCAATATCACTTCTTTGCGACAACCAATCTGCGATTCGCCTTGCAGAAAATCCAGTGTTTCATGCTAGAACAAAGCATGTGGAGGTGCACTACCATTTCATTAGAGAGAAGGTCCTAAAGGAAGAAATTGAGATGCAGCAGATCAAGACAGATGACCAAGTGGCAGACTTGTTTACAAAAGGGTTGAATACTAGCAAACATGAGAGCTTTCGCTGTCAGCTCAACATGATGCAGCGAATGAGGACTAGTGCTGAGGGGGAGTGTTGAAATATCATCACTAGCCCAATAGAGTCAAGCCCAATAATTGTACTAGCCCAATAGAGTCAAGCCTAATTGTACGAGCCCAGTATATTTATTTTAGTAGAGATTTTAGGAGAAAGAGATGTAGATATTTTAGGAGAAAGATTCAATTTGTTAGGTCTAGATTCAAATCGGTTAGGTCTAGATTTAGATTGGTTAAATATAGATTGTTTACTCTTAGTATAAATACCCCCACCCTACCTAGGTTATTCATCCAAGAAATCTAAAAACAATAAAAAGCAGAAGTATTCTACAGAGTGTCTTGTATTCTCTTCTCGATTGGTCTTAATAAAGAGAGCGAGTGTTTCCCACAGTGAGTTGTGTTCAACATGAAGTTCCAGTGGAAGGCGAGGGAGCCGCGCTGCCTGGAGCAAGAGACGAAGACGGTGATGAAGCCGGAGGAGTCGCCACAGTAGGCGAAGGAGCCGATTTAGGCGAGGAGACCGGCGGCGACTTGGTTGGAGAAGAGGCCGGTGCAGCGCCCGGAGCCTGGCCCAAAGAGCCGGCGATTAAAGCGACGAGGACGACGAAGACAAAGGCGGAGGAGGAAGCCATGGCCGTAAAAATGCAAAGAGAAGAGGGAAGAACACGAAAATGGAAGATGGAAGCGAAGTTTCAGTTGCAGAGATTGAGGATGAGAGAAGACGAGGGTTCTACAAAGGCTTAA

mRNA sequence

ATGGAGGAAGAAATTATAGCCTTGGAGCATAATCAAACTTGGGAACTAGTGCCAAGACTAGGAGATATCAAACCCGTCTCTTGCAAGTGGGTCTATAAAATAAAGCGTCGACCGGATGGATCAATCGAGAGATACAAGGCTCGACTTGTGGCTCGAGGATTTTCTCAACAATATGGACTAGATTATGATGAAACATTCAGTCCAGTGGCAAAGATTACTACCGTACGAGTTCTGCTAGCACTCGCAGCAAGTAAAGATTGGAAACTGTGGCAAATGGATGTGAAGAATGCCTTCTTGCACGGAGAGCTAGACAGGGAGATTTATATGAACCAACCAAAGGGATTTGAGAGTGCAGCTAATCCTAATTATGTATGCAAGCTTAGAAAAGCTCTTTATGGACTGAAACAAGCACCGAGAGCTTGGTATGGTAAGATTGCTGAATTTCTTACCCAAAGTGGTTATTCAGTTGCGCATGCAGACTCAAGCCTATTCATCAAAGAAAGAGAAGGAAATTTGACAATTGTGTTGGTCTACGTGGACGATTTGATTATCACCGGGGACGATGAAAGAGAAATTTATCAAACAAGAGAAAATTTATCAATACGCTTTCAGATGAAAGAGCTAGGAGAGCTTAAACACTTCTTAGGCCTAGAAGTTGATCGCACAGATGAAGGACTGTTTCTCTGCCAACAAAAGTATACCAGAGACATGCTTCAGAAGTTCAACATGTTAGAGTGCAAGCAAGTTTCAACACCGATGGAGATAAATGCCAAGATTTGTGCACATGAAGGCAAAGAGTTGAACGATGAAACAACGTACCGACAACTAGTAGGTAGTCTTATCTACCTAACTTTAACTCGACCTGATATCTCGTATGCAGTTGGGGTTATGAGTCGATACATGCAAAGTCCAAAGAAGCCTTATCTGGATGCAGCTCGACGGATCTTGAGATATATCAAAGGTACAATCGACTATGGTCTTTTGTACAAAAGAAGCAAAGACTGCAAGCTAGTTGGATACTGTGATGCTGACTATGCAGGAGACCACGATACTCGGAGGTCAACCACTGGGTATGTGTTCAAGTTTGGTTCGGGAACAATTTCTTGGTGTAGCAAGAGACAACCAACAGTATCATTATCAACTACAGAAGCAGAGTATAGAGCAGCGGCTGGAGCAGCCCAGGAAAGTACATGGCTAAAACTCTTGATGGAAGATTTGCACCAGAAAATTGACTATCCAATATCACTTCTTTGCGACAACCAATCTGCGATTCGCCTTGCAGAAAATCCAGTGTTTCATGCTAGAACAAAGCATGTGGAGGTGCACTACCATTTCATTAGAGAGAAGGTCCTAAAGGAAGAAATTGAGATGCAGCAGATCAAGACAGATGACCAAGTGGCAGACTTGTTTACAAAAGGGTTGAATACTAGCAAACATGAGAGCTTTCGCTTTCCAGTGGAAGGCGAGGGAGCCGCGCTGCCTGGAGCAAGAGACGAAGACGGTGATGAAGCCGGAGGAGTCGCCACAGTAGGCGAAGGAGCCGATTTAGGCGAGGAGACCGGCGGCGACTTGGTTGGAGAAGAGGCCGGTGCAGCGCCCGGAGCCTGGCCCAAAGAGCCGGCGATTAAAGCGACGAGGACGACGAAGACAAAGGCGGAGGAGGAAGCCATGGCCGTAAAAATGCAAAGAGAAGAGGGAAGAACACGAAAATGGAAGATGGAAGCGAAGTTTCAGTTGCAGAGATTGAGGATGAGAGAAGACGAGGGTTCTACAAAGGCTTAA

Coding sequence (CDS)

ATGGAGGAAGAAATTATAGCCTTGGAGCATAATCAAACTTGGGAACTAGTGCCAAGACTAGGAGATATCAAACCCGTCTCTTGCAAGTGGGTCTATAAAATAAAGCGTCGACCGGATGGATCAATCGAGAGATACAAGGCTCGACTTGTGGCTCGAGGATTTTCTCAACAATATGGACTAGATTATGATGAAACATTCAGTCCAGTGGCAAAGATTACTACCGTACGAGTTCTGCTAGCACTCGCAGCAAGTAAAGATTGGAAACTGTGGCAAATGGATGTGAAGAATGCCTTCTTGCACGGAGAGCTAGACAGGGAGATTTATATGAACCAACCAAAGGGATTTGAGAGTGCAGCTAATCCTAATTATGTATGCAAGCTTAGAAAAGCTCTTTATGGACTGAAACAAGCACCGAGAGCTTGGTATGGTAAGATTGCTGAATTTCTTACCCAAAGTGGTTATTCAGTTGCGCATGCAGACTCAAGCCTATTCATCAAAGAAAGAGAAGGAAATTTGACAATTGTGTTGGTCTACGTGGACGATTTGATTATCACCGGGGACGATGAAAGAGAAATTTATCAAACAAGAGAAAATTTATCAATACGCTTTCAGATGAAAGAGCTAGGAGAGCTTAAACACTTCTTAGGCCTAGAAGTTGATCGCACAGATGAAGGACTGTTTCTCTGCCAACAAAAGTATACCAGAGACATGCTTCAGAAGTTCAACATGTTAGAGTGCAAGCAAGTTTCAACACCGATGGAGATAAATGCCAAGATTTGTGCACATGAAGGCAAAGAGTTGAACGATGAAACAACGTACCGACAACTAGTAGGTAGTCTTATCTACCTAACTTTAACTCGACCTGATATCTCGTATGCAGTTGGGGTTATGAGTCGATACATGCAAAGTCCAAAGAAGCCTTATCTGGATGCAGCTCGACGGATCTTGAGATATATCAAAGGTACAATCGACTATGGTCTTTTGTACAAAAGAAGCAAAGACTGCAAGCTAGTTGGATACTGTGATGCTGACTATGCAGGAGACCACGATACTCGGAGGTCAACCACTGGGTATGTGTTCAAGTTTGGTTCGGGAACAATTTCTTGGTGTAGCAAGAGACAACCAACAGTATCATTATCAACTACAGAAGCAGAGTATAGAGCAGCGGCTGGAGCAGCCCAGGAAAGTACATGGCTAAAACTCTTGATGGAAGATTTGCACCAGAAAATTGACTATCCAATATCACTTCTTTGCGACAACCAATCTGCGATTCGCCTTGCAGAAAATCCAGTGTTTCATGCTAGAACAAAGCATGTGGAGGTGCACTACCATTTCATTAGAGAGAAGGTCCTAAAGGAAGAAATTGAGATGCAGCAGATCAAGACAGATGACCAAGTGGCAGACTTGTTTACAAAAGGGTTGAATACTAGCAAACATGAGAGCTTTCGCTTTCCAGTGGAAGGCGAGGGAGCCGCGCTGCCTGGAGCAAGAGACGAAGACGGTGATGAAGCCGGAGGAGTCGCCACAGTAGGCGAAGGAGCCGATTTAGGCGAGGAGACCGGCGGCGACTTGGTTGGAGAAGAGGCCGGTGCAGCGCCCGGAGCCTGGCCCAAAGAGCCGGCGATTAAAGCGACGAGGACGACGAAGACAAAGGCGGAGGAGGAAGCCATGGCCGTAAAAATGCAAAGAGAAGAGGGAAGAACACGAAAATGGAAGATGGAAGCGAAGTTTCAGTTGCAGAGATTGAGGATGAGAGAAGACGAGGGTTCTACAAAGGCTTAA

Protein sequence

MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGLDYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAANPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQKFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRYMQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDNQSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHESFRFPVEGEGAALPGARDEDGDEAGGVATVGEGADLGEETGGDLVGEEAGAAPGAWPKEPAIKATRTTKTKAEEEAMAVKMQREEGRTRKWKMEAKFQLQRLRMREDEGSTKA

Homology

[Close]

BLAST of CmaCh09G005780 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 2.2e-124
Identity = 223/483 (46.17%), Postives = 312/483 (64.60%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELV-PRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYG 60
            M  EI A   N TW+LV P    +  V C+W++  K   DGS+ RYKARLVA+G++Q+ G
Sbjct: 972  MGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPG 1031

Query: 61   LDYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAA 120
            LDY ETFSPV K T++R++L +A  + W + Q+DV NAFL G L  ++YM+QP GF    
Sbjct: 1032 LDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKD 1091

Query: 121  NPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYV 180
             PNYVCKLRKALYGLKQAPRAWY ++  +L   G+  + +D+SLF+ +R  ++  +LVYV
Sbjct: 1092 RPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYV 1151

Query: 181  DDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQ 240
            DD++ITG+D   ++ T +NLS RF +K+  EL +FLG+E  R   GL L Q++Y  D+L 
Sbjct: 1152 DDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLA 1211

Query: 241  KFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSR 300
            + NM+  K V+TPM  + K+  + G +L D T YR +VGSL YL  TRPDISYAV  +S+
Sbjct: 1212 RTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQ 1271

Query: 301  YMQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYV 360
            +M  P + +L A +RILRY+ GT ++G+  K+     L  Y DAD+AGD D   ST GY+
Sbjct: 1272 FMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYI 1331

Query: 361  FKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCD 420
               G   ISW SK+Q  V  S+TEAEYR+ A  + E  W+  L+ +L  ++  P  + CD
Sbjct: 1332 VYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCD 1391

Query: 421  NQSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKH 480
            N  A  L  NPVFH+R KH+ + YHFIR +V    + +  + T DQ+AD  TK L+ +  
Sbjct: 1392 NVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAF 1451

Query: 481  ESF 483
            ++F
Sbjct: 1452 QNF 1454

[Close]

BLAST of CmaCh09G005780 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 4.2e-123
Identity = 222/483 (45.96%), Postives = 311/483 (64.39%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELV-PRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYG 60
            M  EI A   N TW+LV P    +  V C+W++  K   DGS+ RYKARLVA+G++Q+ G
Sbjct: 955  MGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPG 1014

Query: 61   LDYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAA 120
            LDY ETFSPV K T++R++L +A  + W + Q+DV NAFL G L  E+YM+QP GF    
Sbjct: 1015 LDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKD 1074

Query: 121  NPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYV 180
             P+YVC+LRKA+YGLKQAPRAWY ++  +L   G+  + +D+SLF+ +R  ++  +LVYV
Sbjct: 1075 RPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYV 1134

Query: 181  DDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQ 240
            DD++ITG+D   +  T + LS RF +KE  +L +FLG+E  R  +GL L Q++YT D+L 
Sbjct: 1135 DDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLA 1194

Query: 241  KFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSR 300
            + NML  K V+TPM  + K+  H G +L D T YR +VGSL YL  TRPD+SYAV  +S+
Sbjct: 1195 RTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQ 1254

Query: 301  YMQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYV 360
            YM  P   + +A +R+LRY+ GT D+G+  K+     L  Y DAD+AGD D   ST GY+
Sbjct: 1255 YMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYI 1314

Query: 361  FKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCD 420
               G   ISW SK+Q  V  S+TEAEYR+ A  + E  W+  L+ +L  ++ +P  + CD
Sbjct: 1315 VYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCD 1374

Query: 421  NQSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKH 480
            N  A  L  NPVFH+R KH+ + YHFIR +V    + +  + T DQ+AD  TK L+    
Sbjct: 1375 NVGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAF 1434

Query: 481  ESF 483
            ++F
Sbjct: 1435 QNF 1437

[Close]

BLAST of CmaCh09G005780 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 5.8e-117
Identity = 227/492 (46.14%), Postives = 330/492 (67.07%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
            M+EE+ +L+ N T++LV      +P+ CKWV+K+K+  D  + RYKARLV +GF Q+ G+
Sbjct: 830  MQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGI 889

Query: 61   DYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAAN 120
            D+DE FSPV K+T++R +L+LAAS D ++ Q+DVK AFLHG+L+ EIYM QP+GFE A  
Sbjct: 890  DFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGK 949

Query: 121  PNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKE-REGNLTIVLVYV 180
             + VCKL K+LYGLKQAPR WY K   F+    Y   ++D  ++ K   E N  I+L+YV
Sbjct: 950  KHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYV 1009

Query: 181  DDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEV--DRTDEGLFLCQQKYTRDM 240
            DD++I G D+  I + + +LS  F MK+LG  +  LG+++  +RT   L+L Q+KY   +
Sbjct: 1010 DDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERV 1069

Query: 241  LQKFNMLECKQVSTP----MEINAKICAHEGKELND--ETTYRQLVGSLIY-LTLTRPDI 300
            L++FNM   K VSTP    ++++ K+C    +E  +  +  Y   VGSL+Y +  TRPDI
Sbjct: 1070 LERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDI 1129

Query: 301  SYAVGVMSRYMQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHD 360
            ++AVGV+SR++++P K + +A + ILRY++GT    L +  S D  L GY DAD AGD D
Sbjct: 1130 AHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGS-DPILKGYTDADMAGDID 1189

Query: 361  TRRSTTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMED--LHQ 420
             R+S+TGY+F F  G ISW SK Q  V+LSTTEAEY AA    +E  WLK  +++  LHQ
Sbjct: 1190 NRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQ 1249

Query: 421  KIDYPISLLCDNQSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVAD 480
            K +Y +   CD+QSAI L++N ++HARTKH++V YH+IRE V  E +++ +I T++  AD
Sbjct: 1250 K-EYVV--YCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPAD 1309

[Close]

BLAST of CmaCh09G005780 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 370.5 bits (950), Expect = 3.4e-101
Identity = 198/489 (40.49%), Postives = 304/489 (62.17%), Query Frame = 0


Query: 4    EIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGLDYD 63
            E+ A + N TW +  R  +   V  +WV+ +K    G+  RYKARLVARGF+Q+Y +DY+
Sbjct: 913  ELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYE 972

Query: 64   ETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAANPNY 123
            ETF+PVA+I++ R +L+L    + K+ QMDVK AFL+G L  EIYM  P+G   + N + 
Sbjct: 973  ETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDN 1032

Query: 124  VCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLT---IVLVYVD 183
            VCKL KA+YGLKQA R W+    + L +  +  +  D  ++I ++ GN+     VL+YVD
Sbjct: 1033 VCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDK-GNINENIYVLLYVD 1092

Query: 184  DLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQK 243
            D++I   D   +   +  L  +F+M +L E+KHF+G+ ++  ++ ++L Q  Y + +L K
Sbjct: 1093 DVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSK 1152

Query: 244  FNMLECKQVSTPM--EINAKICAHEGKELNDETTYRQLVGSLIYLTL-TRPDISYAVGVM 303
            FNM  C  VSTP+  +IN ++      + +  T  R L+G L+Y+ L TRPD++ AV ++
Sbjct: 1153 FNMENCNAVSTPLPSKINYELL---NSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNIL 1212

Query: 304  SRYMQSPKKPYLDAARRILRYIKGTIDYGLLYKRSK--DCKLVGYCDADYAGDHDTRRST 363
            SRY            +R+LRY+KGTID  L++K++   + K++GY D+D+AG    R+ST
Sbjct: 1213 SRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKST 1272

Query: 364  TGYVFK-FGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPI 423
            TGY+FK F    I W +KRQ +V+ S+TEAEY A   A +E+ WLK L+  ++ K++ PI
Sbjct: 1273 TGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPI 1332

Query: 424  SLLCDNQSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGL 483
             +  DNQ  I +A NP  H R KH+++ YHF RE+V    I ++ I T++Q+AD+FTK L
Sbjct: 1333 KIYEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPL 1392

[Close]

BLAST of CmaCh09G005780 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.3e-47
Identity = 99/224 (44.20%), Postives = 136/224 (60.71%), Query Frame = 0


Query: 175 VLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYT 234
           +L+YVDD+++TG     +      LS  F MK+LG + +FLG+++     GLFL Q KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 235 RDMLQKFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAV 294
             +L    ML+CK +STP+ +         K   D + +R +VG+L YLTLTRPDISYAV
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 295 GVMSRYMQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRS 354
            ++ + M  P     D  +R+LRY+KGTI +GL   ++    +  +CD+D+AG   TRRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 355 TTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTW 399
           TTG+    G   ISW +KRQPTVS S+TE EYRA A  A E TW
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of CmaCh09G005780 vs. ExPASy TrEMBL
Match: A0A6A3D2P3 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001120pilonHSYRG00173 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 6.3e-239
Identity = 401/483 (83.02%), Postives = 439/483 (90.89%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
            M+EEI AL+ NQTW++VP++ D+KP+SCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL
Sbjct: 841  MKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 900

Query: 61   DYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAAN 120
            DYDETFSPVAK+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYM QP GF+S  +
Sbjct: 901  DYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQDH 960

Query: 121  PNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVD 180
            P YVCKLRKALYGLKQAPRAWYGKIAEFLT+SGYSV  ADSSLF+K  EG L IVLVYVD
Sbjct: 961  PEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEGKLAIVLVYVD 1020

Query: 181  DLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQK 240
            DLIITGDDE EI QT+ENLS+RFQMKELG+LKHFLGLEVDRT EG+FLCQQKY +D+L++
Sbjct: 1021 DLIITGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEVDRTHEGIFLCQQKYAKDLLKR 1080

Query: 241  FNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRY 300
            F MLECK  STPME N K+CAHEGK+L D T YRQLVGSLIYLTLTRPDISYAVGVMSRY
Sbjct: 1081 FGMLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRY 1140

Query: 301  MQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVF 360
            MQ+PKKP+L+A RRILRY+K TIDYGLLYK+ +DCKLVGYCDADYAGDHDTRRSTTGYVF
Sbjct: 1141 MQNPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVF 1200

Query: 361  KFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDN 420
            K GSGTISWCSKRQPTVSLSTTEAEYRAAA AAQESTWL  LM +LHQ +DY I L CDN
Sbjct: 1201 KLGSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDN 1260

Query: 421  QSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHE 480
            QSAIRLAENPVFHARTKHVEVHYHF+REKVL+EEIEM+QIKTD+Q+ADLFTK L+  K E
Sbjct: 1261 QSAIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFE 1320

Query: 481  SFR 484
             FR
Sbjct: 1321 HFR 1323

[Close]

BLAST of CmaCh09G005780 vs. ExPASy TrEMBL
Match: A0A6A3AQC6 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110429pilonHSYRG01243 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 6.3e-239
Identity = 401/483 (83.02%), Postives = 439/483 (90.89%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
            M+EEI AL+ NQTW++VP++ D+KP+SCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL
Sbjct: 869  MKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 928

Query: 61   DYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAAN 120
            DYDETFSPVAK+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYM QP GF+S  +
Sbjct: 929  DYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQDH 988

Query: 121  PNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVD 180
            P YVCKLRKALYGLKQAPRAWYGKIAEFLT+SGYSV  ADSSLF+K  EG L IVLVYVD
Sbjct: 989  PEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEGKLAIVLVYVD 1048

Query: 181  DLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQK 240
            DLIITGDDE EI QT+ENLS+RFQMKELG+LKHFLGLEVDRT EG+FLCQQKY +D+L++
Sbjct: 1049 DLIITGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEVDRTHEGIFLCQQKYAKDLLKR 1108

Query: 241  FNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRY 300
            F MLECK  STPME N K+CAHEGK+L D T YRQLVGSLIYLTLTRPDISYAVGVMSRY
Sbjct: 1109 FGMLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRY 1168

Query: 301  MQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVF 360
            MQ+PKKP+L+A RRILRY+K TIDYGLLYK+ +DCKLVGYCDADYAGDHDTRRSTTGYVF
Sbjct: 1169 MQNPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVF 1228

Query: 361  KFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDN 420
            K GSGTISWCSKRQPTVSLSTTEAEYRAAA AAQESTWL  LM +LHQ +DY I L CDN
Sbjct: 1229 KLGSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDN 1288

Query: 421  QSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHE 480
            QSAIRLAENPVFHARTKHVEVHYHF+REKVL+EEIEM+QIKTD+Q+ADLFTK L+  K E
Sbjct: 1289 QSAIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFE 1348

Query: 481  SFR 484
             FR
Sbjct: 1349 HFR 1351

[Close]

BLAST of CmaCh09G005780 vs. ExPASy TrEMBL
Match: A0A6A2Z579 (Integrase catalytic domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111024pilonHSYRG00006 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 6.3e-239
Identity = 401/483 (83.02%), Postives = 439/483 (90.89%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
            M+EEI AL+ NQTW++VP++ D+KP+SCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL
Sbjct: 768  MKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 827

Query: 61   DYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAAN 120
            DYDETFSPVAK+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYM QP GF+S  +
Sbjct: 828  DYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQDH 887

Query: 121  PNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVD 180
            P YVCKLRKALYGLKQAPRAWYGKIAEFLT+SGYSV  ADSSLF+K  EG L IVLVYVD
Sbjct: 888  PEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEGKLAIVLVYVD 947

Query: 181  DLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQK 240
            DLIITGDDE EI QT+ENLS+RFQMKELG+LKHFLGLEVDRT EG+FLCQQKY +D+L++
Sbjct: 948  DLIITGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEVDRTHEGIFLCQQKYAKDLLKR 1007

Query: 241  FNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRY 300
            F MLECK  STPME N K+CAHEGK+L D T YRQLVGSLIYLTLTRPDISYAVGVMSRY
Sbjct: 1008 FGMLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRY 1067

Query: 301  MQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVF 360
            MQ+PKKP+L+A RRILRY+K TIDYGLLYK+ +DCKLVGYCDADYAGDHDTRRSTTGYVF
Sbjct: 1068 MQNPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVF 1127

Query: 361  KFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDN 420
            K GSGTISWCSKRQPTVSLSTTEAEYRAAA AAQESTWL  LM +LHQ +DY I L CDN
Sbjct: 1128 KLGSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDN 1187

Query: 421  QSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHE 480
            QSAIRLAENPVFHARTKHVEVHYHF+REKVL+EEIEM+QIKTD+Q+ADLFTK L+  K E
Sbjct: 1188 QSAIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFE 1247

Query: 481  SFR 484
             FR
Sbjct: 1248 HFR 1250

[Close]

BLAST of CmaCh09G005780 vs. ExPASy TrEMBL
Match: A0A6A3BE59 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110183pilonHSYRG00102 PE=4 SV=1)

HSP 1 Score: 833.2 bits (2151), Expect = 6.9e-238
Identity = 400/483 (82.82%), Postives = 438/483 (90.68%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
            M+EEI AL+ NQTW++VP++ D+KP+SCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL
Sbjct: 869  MKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 928

Query: 61   DYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAAN 120
            DYDETFSPVAK+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYM QP GF+S  +
Sbjct: 929  DYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQDH 988

Query: 121  PNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVD 180
              YVCKLRKALYGLKQAPRAWYGKIAEFLT+SGYSV  ADSSLF+K  EG L IVLVYVD
Sbjct: 989  HEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEGKLAIVLVYVD 1048

Query: 181  DLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQK 240
            DLIITGDDE EI QT+ENLS+RFQMKELG+LKHFLGLEVDRT EG+FLCQQKY +D+L++
Sbjct: 1049 DLIITGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEVDRTHEGIFLCQQKYAKDLLKR 1108

Query: 241  FNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRY 300
            F MLECK  STPME N K+CAHEGK+L D T YRQLVGSLIYLTLTRPDISYAVGVMSRY
Sbjct: 1109 FGMLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRY 1168

Query: 301  MQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVF 360
            MQ+PKKP+L+A RRILRY+K TIDYGLLYK+ +DCKLVGYCDADYAGDHDTRRSTTGYVF
Sbjct: 1169 MQNPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVF 1228

Query: 361  KFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDN 420
            K GSGTISWCSKRQPTVSLSTTEAEYRAAA AAQESTWL  LM +LHQ +DY I L CDN
Sbjct: 1229 KLGSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDN 1288

Query: 421  QSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHE 480
            QSAIRLAENPVFHARTKHVEVHYHF+REKVL+EEIEM+QIKTD+Q+ADLFTK L+  K E
Sbjct: 1289 QSAIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFE 1348

Query: 481  SFR 484
             FR
Sbjct: 1349 HFR 1351

[Close]

BLAST of CmaCh09G005780 vs. ExPASy TrEMBL
Match: A0A6A2XQP2 (Integrase catalytic domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117005pilonHSYRG00073 PE=4 SV=1)

HSP 1 Score: 832.4 bits (2149), Expect = 1.2e-237
Identity = 398/483 (82.40%), Postives = 437/483 (90.48%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
            M+EEI AL+ NQTW++VP++ D+KP+SCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL
Sbjct: 726  MKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 785

Query: 61   DYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAAN 120
            DYDETFSPVAK+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYM QP GF+S  +
Sbjct: 786  DYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQDH 845

Query: 121  PNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVD 180
            P YVCKLRKALYGLKQAPRAWYGKIAEFLT+SGYSV  ADSSLF+K  EG L IVLVYVD
Sbjct: 846  PEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEGKLAIVLVYVD 905

Query: 181  DLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQK 240
            DLII GDDE EI QT+ENLS+RFQMKELG+LKHFLGLEVDRT EG+FLCQQKY +D+L++
Sbjct: 906  DLIIAGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEVDRTHEGIFLCQQKYAKDLLKR 965

Query: 241  FNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRY 300
            F MLECK  STPME N K+CAHEGK+L D T YRQLVGSLIYLTLTRPDISYAVGVMSRY
Sbjct: 966  FGMLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRY 1025

Query: 301  MQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVF 360
            MQ+PKKP+L+A RRILRY+K TIDYGLLYK+ +DCKLVGYCDADYAGDHDTRRSTTGYVF
Sbjct: 1026 MQNPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVF 1085

Query: 361  KFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDN 420
            K GSG ISWCSKRQPT+SLSTTEAEYRAAA AAQESTWL  LM +LHQ +DY ISL CDN
Sbjct: 1086 KLGSGIISWCSKRQPTISLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAISLYCDN 1145

Query: 421  QSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHE 480
            QS IRLAENPVFHARTKHVEVHYHF+REKVL+EEIEM+QIKTD+Q+ADLFTK L+  K E
Sbjct: 1146 QSTIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFE 1205

Query: 481  SFR 484
             FR
Sbjct: 1206 HFR 1208

[Close]

BLAST of CmaCh09G005780 vs. NCBI nr
Match: KAE8705435.1 (hypothetical protein F3Y22_tig00110429pilonHSYRG01243 [Hibiscus syriacus])

HSP 1 Score: 836.6 bits (2160), Expect = 1.3e-238
Identity = 401/483 (83.02%), Postives = 439/483 (90.89%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
            M+EEI AL+ NQTW++VP++ D+KP+SCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL
Sbjct: 869  MKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 928

Query: 61   DYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAAN 120
            DYDETFSPVAK+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYM QP GF+S  +
Sbjct: 929  DYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQDH 988

Query: 121  PNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVD 180
            P YVCKLRKALYGLKQAPRAWYGKIAEFLT+SGYSV  ADSSLF+K  EG L IVLVYVD
Sbjct: 989  PEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEGKLAIVLVYVD 1048

Query: 181  DLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQK 240
            DLIITGDDE EI QT+ENLS+RFQMKELG+LKHFLGLEVDRT EG+FLCQQKY +D+L++
Sbjct: 1049 DLIITGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEVDRTHEGIFLCQQKYAKDLLKR 1108

Query: 241  FNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRY 300
            F MLECK  STPME N K+CAHEGK+L D T YRQLVGSLIYLTLTRPDISYAVGVMSRY
Sbjct: 1109 FGMLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRY 1168

Query: 301  MQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVF 360
            MQ+PKKP+L+A RRILRY+K TIDYGLLYK+ +DCKLVGYCDADYAGDHDTRRSTTGYVF
Sbjct: 1169 MQNPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVF 1228

Query: 361  KFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDN 420
            K GSGTISWCSKRQPTVSLSTTEAEYRAAA AAQESTWL  LM +LHQ +DY I L CDN
Sbjct: 1229 KLGSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDN 1288

Query: 421  QSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHE 480
            QSAIRLAENPVFHARTKHVEVHYHF+REKVL+EEIEM+QIKTD+Q+ADLFTK L+  K E
Sbjct: 1289 QSAIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFE 1348

Query: 481  SFR 484
             FR
Sbjct: 1349 HFR 1351

[Close]

BLAST of CmaCh09G005780 vs. NCBI nr
Match: KAE8687058.1 (hypothetical protein F3Y22_tig00111024pilonHSYRG00006 [Hibiscus syriacus])

HSP 1 Score: 836.6 bits (2160), Expect = 1.3e-238
Identity = 401/483 (83.02%), Postives = 439/483 (90.89%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
            M+EEI AL+ NQTW++VP++ D+KP+SCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL
Sbjct: 768  MKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 827

Query: 61   DYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAAN 120
            DYDETFSPVAK+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYM QP GF+S  +
Sbjct: 828  DYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQDH 887

Query: 121  PNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVD 180
            P YVCKLRKALYGLKQAPRAWYGKIAEFLT+SGYSV  ADSSLF+K  EG L IVLVYVD
Sbjct: 888  PEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEGKLAIVLVYVD 947

Query: 181  DLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQK 240
            DLIITGDDE EI QT+ENLS+RFQMKELG+LKHFLGLEVDRT EG+FLCQQKY +D+L++
Sbjct: 948  DLIITGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEVDRTHEGIFLCQQKYAKDLLKR 1007

Query: 241  FNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRY 300
            F MLECK  STPME N K+CAHEGK+L D T YRQLVGSLIYLTLTRPDISYAVGVMSRY
Sbjct: 1008 FGMLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRY 1067

Query: 301  MQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVF 360
            MQ+PKKP+L+A RRILRY+K TIDYGLLYK+ +DCKLVGYCDADYAGDHDTRRSTTGYVF
Sbjct: 1068 MQNPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVF 1127

Query: 361  KFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDN 420
            K GSGTISWCSKRQPTVSLSTTEAEYRAAA AAQESTWL  LM +LHQ +DY I L CDN
Sbjct: 1128 KLGSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDN 1187

Query: 421  QSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHE 480
            QSAIRLAENPVFHARTKHVEVHYHF+REKVL+EEIEM+QIKTD+Q+ADLFTK L+  K E
Sbjct: 1188 QSAIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFE 1247

Query: 481  SFR 484
             FR
Sbjct: 1248 HFR 1250

[Close]

BLAST of CmaCh09G005780 vs. NCBI nr
Match: KAE8733549.1 (hypothetical protein F3Y22_tig00001120pilonHSYRG00173 [Hibiscus syriacus])

HSP 1 Score: 836.6 bits (2160), Expect = 1.3e-238
Identity = 401/483 (83.02%), Postives = 439/483 (90.89%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
            M+EEI AL+ NQTW++VP++ D+KP+SCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL
Sbjct: 841  MKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 900

Query: 61   DYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAAN 120
            DYDETFSPVAK+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYM QP GF+S  +
Sbjct: 901  DYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQDH 960

Query: 121  PNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVD 180
            P YVCKLRKALYGLKQAPRAWYGKIAEFLT+SGYSV  ADSSLF+K  EG L IVLVYVD
Sbjct: 961  PEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEGKLAIVLVYVD 1020

Query: 181  DLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQK 240
            DLIITGDDE EI QT+ENLS+RFQMKELG+LKHFLGLEVDRT EG+FLCQQKY +D+L++
Sbjct: 1021 DLIITGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEVDRTHEGIFLCQQKYAKDLLKR 1080

Query: 241  FNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRY 300
            F MLECK  STPME N K+CAHEGK+L D T YRQLVGSLIYLTLTRPDISYAVGVMSRY
Sbjct: 1081 FGMLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRY 1140

Query: 301  MQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVF 360
            MQ+PKKP+L+A RRILRY+K TIDYGLLYK+ +DCKLVGYCDADYAGDHDTRRSTTGYVF
Sbjct: 1141 MQNPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVF 1200

Query: 361  KFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDN 420
            K GSGTISWCSKRQPTVSLSTTEAEYRAAA AAQESTWL  LM +LHQ +DY I L CDN
Sbjct: 1201 KLGSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDN 1260

Query: 421  QSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHE 480
            QSAIRLAENPVFHARTKHVEVHYHF+REKVL+EEIEM+QIKTD+Q+ADLFTK L+  K E
Sbjct: 1261 QSAIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFE 1320

Query: 481  SFR 484
             FR
Sbjct: 1321 HFR 1323

[Close]

BLAST of CmaCh09G005780 vs. NCBI nr
Match: KAE8715296.1 (hypothetical protein F3Y22_tig00110183pilonHSYRG00102 [Hibiscus syriacus])

HSP 1 Score: 833.2 bits (2151), Expect = 1.4e-237
Identity = 400/483 (82.82%), Postives = 438/483 (90.68%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
            M+EEI AL+ NQTW++VP++ D+KP+SCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL
Sbjct: 869  MKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 928

Query: 61   DYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAAN 120
            DYDETFSPVAK+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYM QP GF+S  +
Sbjct: 929  DYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQDH 988

Query: 121  PNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVD 180
              YVCKLRKALYGLKQAPRAWYGKIAEFLT+SGYSV  ADSSLF+K  EG L IVLVYVD
Sbjct: 989  HEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEGKLAIVLVYVD 1048

Query: 181  DLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQK 240
            DLIITGDDE EI QT+ENLS+RFQMKELG+LKHFLGLEVDRT EG+FLCQQKY +D+L++
Sbjct: 1049 DLIITGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEVDRTHEGIFLCQQKYAKDLLKR 1108

Query: 241  FNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRY 300
            F MLECK  STPME N K+CAHEGK+L D T YRQLVGSLIYLTLTRPDISYAVGVMSRY
Sbjct: 1109 FGMLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRY 1168

Query: 301  MQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVF 360
            MQ+PKKP+L+A RRILRY+K TIDYGLLYK+ +DCKLVGYCDADYAGDHDTRRSTTGYVF
Sbjct: 1169 MQNPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVF 1228

Query: 361  KFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDN 420
            K GSGTISWCSKRQPTVSLSTTEAEYRAAA AAQESTWL  LM +LHQ +DY I L CDN
Sbjct: 1229 KLGSGTISWCSKRQPTVSLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAIPLYCDN 1288

Query: 421  QSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHE 480
            QSAIRLAENPVFHARTKHVEVHYHF+REKVL+EEIEM+QIKTD+Q+ADLFTK L+  K E
Sbjct: 1289 QSAIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFE 1348

Query: 481  SFR 484
             FR
Sbjct: 1349 HFR 1351

[Close]

BLAST of CmaCh09G005780 vs. NCBI nr
Match: KAE8656184.1 (hypothetical protein F3Y22_tig00117005pilonHSYRG00073 [Hibiscus syriacus])

HSP 1 Score: 832.4 bits (2149), Expect = 2.4e-237
Identity = 398/483 (82.40%), Postives = 437/483 (90.48%), Query Frame = 0


Query: 1    MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
            M+EEI AL+ NQTW++VP++ D+KP+SCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL
Sbjct: 726  MKEEIDALQQNQTWDIVPKIKDVKPISCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 785

Query: 61   DYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFESAAN 120
            DYDETFSPVAK+TTVRVLLALAA+KDW LWQMDVKNAFLHGELDREIYM QP GF+S  +
Sbjct: 786  DYDETFSPVAKLTTVRVLLALAANKDWNLWQMDVKNAFLHGELDREIYMTQPMGFQSQDH 845

Query: 121  PNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVLVYVD 180
            P YVCKLRKALYGLKQAPRAWYGKIAEFLT+SGYSV  ADSSLF+K  EG L IVLVYVD
Sbjct: 846  PEYVCKLRKALYGLKQAPRAWYGKIAEFLTKSGYSVTPADSSLFVKANEGKLAIVLVYVD 905

Query: 181  DLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRDMLQK 240
            DLII GDDE EI QT+ENLS+RFQMKELG+LKHFLGLEVDRT EG+FLCQQKY +D+L++
Sbjct: 906  DLIIAGDDEAEILQTKENLSVRFQMKELGQLKHFLGLEVDRTHEGIFLCQQKYAKDLLKR 965

Query: 241  FNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGVMSRY 300
            F MLECK  STPME N K+CAHEGK+L D T YRQLVGSLIYLTLTRPDISYAVGVMSRY
Sbjct: 966  FGMLECKSTSTPMEPNIKMCAHEGKDLEDATMYRQLVGSLIYLTLTRPDISYAVGVMSRY 1025

Query: 301  MQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTTGYVF 360
            MQ+PKKP+L+A RRILRY+K TIDYGLLYK+ +DCKLVGYCDADYAGDHDTRRSTTGYVF
Sbjct: 1026 MQNPKKPHLEAVRRILRYVKNTIDYGLLYKKGEDCKLVGYCDADYAGDHDTRRSTTGYVF 1085

Query: 361  KFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISLLCDN 420
            K GSG ISWCSKRQPT+SLSTTEAEYRAAA AAQESTWL  LM +LHQ +DY ISL CDN
Sbjct: 1086 KLGSGIISWCSKRQPTISLSTTEAEYRAAAMAAQESTWLIQLMNNLHQPVDYAISLYCDN 1145

Query: 421  QSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLNTSKHE 480
            QS IRLAENPVFHARTKHVEVHYHF+REKVL+EEIEM+QIKTD+Q+ADLFTK L+  K E
Sbjct: 1146 QSTIRLAENPVFHARTKHVEVHYHFVREKVLQEEIEMRQIKTDEQIADLFTKSLSVGKFE 1205

Query: 481  SFR 484
             FR
Sbjct: 1206 HFR 1208

[Close]

BLAST of CmaCh09G005780 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 406.0 bits (1042), Expect = 5.2e-113
Identity = 206/479 (43.01%), Postives = 302/479 (63.05%), Query Frame = 0


Query: 1   MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
           M++EI A+E   TWE+     + KP+ CKWVYKIK   DG+IERYKARLVA+G++QQ G+
Sbjct: 102 MDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGI 161

Query: 61  DYDETFSPVAKITTVRVLLALAASKDWKLWQMDVKNAFLHGELDREIYMNQPKGFES--- 120
           D+ ETFSPV K+T+V+++LA++A  ++ L Q+D+ NAFL+G+LD EIYM  P G+ +   
Sbjct: 162 DFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQG 221

Query: 121 -AANPNYVCKLRKALYGLKQAPRAWYGKIAEFLTQSGYSVAHADSSLFIKEREGNLTIVL 180
            +  PN VC L+K++YGLKQA R W+ K +  L   G+  +H+D + F+K        VL
Sbjct: 222 DSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL 281

Query: 181 VYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYTRD 240
           VYVDD+II  +++  + + +  L   F++++LG LK+FLGLE+ R+  G+ +CQ+KY  D
Sbjct: 282 VYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALD 341

Query: 241 MLQKFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAVGV 300
           +L +  +L CK  S PM+ +    AH G +  D   YR+L+G L+YL +TR DIS+AV  
Sbjct: 342 LLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNK 401

Query: 301 MSRYMQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRSTT 360
           +S++ ++P+  +  A  +IL YIKGT+  GL Y    + +L  + DA +    DTRRST 
Sbjct: 402 LSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTN 461

Query: 361 GYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTWLKLLMEDLHQKIDYPISL 420
           GY    G+  ISW SK+Q  VS S+ EAEYRA + A  E  WL     +L   +  P  L
Sbjct: 462 GYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLL 521

Query: 421 LCDNQSAIRLAENPVFHARTKHVEVHYHFIREKVLKEEIEMQQIKTDDQVADLFTKGLN 476
            CDN +AI +A N VFH RTKH+E   H +RE+ + +       +  D+  D FT+ L+
Sbjct: 522 FCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDE-QDGFTEYLS 579

[Close]

BLAST of CmaCh09G005780 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 192.6 bits (488), Expect = 9.1e-49
Identity = 99/224 (44.20%), Postives = 136/224 (60.71%), Query Frame = 0


Query: 175 VLVYVDDLIITGDDEREIYQTRENLSIRFQMKELGELKHFLGLEVDRTDEGLFLCQQKYT 234
           +L+YVDD+++TG     +      LS  F MK+LG + +FLG+++     GLFL Q KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 235 RDMLQKFNMLECKQVSTPMEINAKICAHEGKELNDETTYRQLVGSLIYLTLTRPDISYAV 294
             +L    ML+CK +STP+ +         K   D + +R +VG+L YLTLTRPDISYAV
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 295 GVMSRYMQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGYCDADYAGDHDTRRS 354
            ++ + M  P     D  +R+LRY+KGTI +GL   ++    +  +CD+D+AG   TRRS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 355 TTGYVFKFGSGTISWCSKRQPTVSLSTTEAEYRAAAGAAQESTW 399
           TTG+    G   ISW +KRQPTVS S+TE EYRA A  A E TW
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of CmaCh09G005780 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 85.5 bits (210), Expect = 1.6e-16
Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 1   MEEEIIALEHNQTWELVPRLGDIKPVSCKWVYKIKRRPDGSIERYKARLVARGFSQQYGL 60
           M+EE+ AL  N+TW LVP   +   + CKWV+K K   DG+++R KARLVA+GF Q+ G+
Sbjct: 44  MQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGI 103

Query: 61  DYDETFSPVAKITTVRVLLALA 83
            + ET+SPV +  T+R +L +A
Sbjct: 104 YFVETYSPVVRTATIRTILNVA 125

[Close]

BLAST of CmaCh09G005780 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 75.1 bits (183), Expect = 2.1e-13
Identity = 31/78 (39.74%), Postives = 52/78 (66.67%), Query Frame = 0


Query: 281 IYLTLTRPDISYAVGVMSRYMQSPKKPYLDAARRILRYIKGTIDYGLLYKRSKDCKLVGY 340
           +YLT+TRPD+++AV  +S++  + +   + A  ++L Y+KGT+  GL Y  + D +L  +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 341 CDADYAGDHDTRRSTTGY 359
            D+D+A   DTRRS TG+
Sbjct: 61  ADSDWASCPDTRRSVTGF 78

The following BLAST results are available for this feature:

BLAST of CmaCh09G005780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	2.2e-124	46.17	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	4.2e-123	45.96	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	5.8e-117	46.14	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	3.4e-101	40.49	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92519	1.3e-47	44.20	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmaCh09G005780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A3D2P3	6.3e-239	83.02	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00001120pilon...	[more]
A0A6A3AQC6	6.3e-239	83.02	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110429pilon...	[more]
A0A6A2Z579	6.3e-239	83.02	Integrase catalytic domain-containing protein OS=Hibiscus syriacus OX=106335 GN=...	[more]
A0A6A3BE59	6.9e-238	82.82	Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110183pilon...	[more]
A0A6A2XQP2	1.2e-237	82.40	Integrase catalytic domain-containing protein OS=Hibiscus syriacus OX=106335 GN=...	[more]

BLAST of CmaCh09G005780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8705435.1	1.3e-238	83.02	hypothetical protein F3Y22_tig00110429pilonHSYRG01243 [Hibiscus syriacus]	[more]
KAE8687058.1	1.3e-238	83.02	hypothetical protein F3Y22_tig00111024pilonHSYRG00006 [Hibiscus syriacus]	[more]
KAE8733549.1	1.3e-238	83.02	hypothetical protein F3Y22_tig00001120pilonHSYRG00173 [Hibiscus syriacus]	[more]
KAE8715296.1	1.4e-237	82.82	hypothetical protein F3Y22_tig00110183pilonHSYRG00102 [Hibiscus syriacus]	[more]
KAE8656184.1	2.4e-237	82.40	hypothetical protein F3Y22_tig00117005pilonHSYRG00073 [Hibiscus syriacus]	[more]

BLAST of CmaCh09G005780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	5.2e-113	43.01	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	9.1e-49	44.20	DNA/RNA polymerases superfamily protein	[more]
ATMG00820.1	1.6e-16	47.56	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00240.1	2.1e-13	39.74	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 11..254 e-value: 1.3E-76 score: 257.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 490..554
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 1..262
None	No IPR available	PANTHER	PTHR11439:SF351	CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8	coord: 1..262
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 338..476 e-value: 6.44937E-77 score: 238.522
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 10..444

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G005780.1	CmaCh09G005780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0015299	solute:proton antiporter activity
molecular_function	GO:0008270	zinc ion binding