CmaCh09G003940 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGGAAGGAGCTTCAAATTTAGAGAGCGCGAAAACCCTAGCAGAGAGAGGATGGCGCTCGATCGTCTTCATCAACATCATCAAGCAGCCGATGGATTGACGAACTTATTCACGAAGGCCAATCACGATCTCTCGGTTGTTCAATACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGACAGCGTAAGAGCAACACGATCTTCTTCTTCTCGTTTATTGAATGGAGGCAGTTATTAATTTAAGAAGGAATTTCTAAGGCTCGAAATGAATGTAGAATTGCTTATGTCTCTCTTCGCTGTTGGTAATTCATAGTTCTAGTACTAGATCTTTGAGCTTAATGTAGAATTATTCCATTCTACAGCAAAAAAGCATCATAGACTCTTTCTATTTTCTTAATCGATGCACTGTTTAGTTTGAGCGCGAAGTTCAAGATCTGGAGCTCGATTTTGAACTATTTGGTTCTCTCTTTGTGTTATTCACTGTACTAATACAAGATCACGAGCTTAGTGTAGGATTGTTTCATTCTTCAGCGTAAGAGCATCATAGACTTTCTATTTTCTTAATCGAGGCACTGTTTAGTTTGAGCATGAAGTTCAAGATCTGGAGCTTAATTTTGAACTATTTTGTTCTCTTTGCTGCTATTCACTGTACTAGTACAAGGTCACAAGCTTAATGTAGAATTATATCATTCTTCAGCGTAAGAGCATCATAGACTCTCTATTTTCTTAGTCGAGGTACTGTTTAGTTTTATGACGAAGTTCAAGATCTGGAGCTCAATGTCGAACTATTTTGTTTTCTCTTTGCTGTTATTCGCTGTATTAATACAAGATCTCGAGCTTGATGTAGAATTGTTCAATTCTACATTGTAGGAGCAAGTAGTCAATCCTGACAGAGTAAGAGCAACATACGTTTGAATTGAACTATTTTGTTTTCTCTGCTTCTAGACTTCTGAGCGGAGGCACTATTTTAATTGAGGAGGACATAGAAGATGTTGAGCATAATGAAGAGTTATTTCATTATCTTTTGCTATTAGCATTTGATAAGTAGTATCACAAGATCTTGAGCTTAACGACGAATTATTTCATTCTACAATGTTAGAGCAAATAAATCCTGATAGAGTCTGGGCAACATAGTTATTTTCAAGGGTCGAGTCACTAGTTTTCATTTCAGTATTTGGTTTGAGGAGGAAGTACTCAATCTTGAGCTTAATGAGGAGTTCTTTCATTTTTCAATTAGAACCGCAGTACTATTACAAGATTTTGAGCTTAACGTAGAATTGTTTTCTCCTCTCTTGCGCGTCAGTTTATTTCATAGTGCTAGCCAAAAATTTGTTGTAATTCTTGATTTTAAAGGTTCGCCGTTTAATATTGTTCAGAGAATGGACTATTGAACTTTCAGATTGAAGTTTTCGGAGAATTTTGTCATCCACAATTTTTCTTCATTTTCGAACTTCTGACTATATTGAGCTTTTTGATCTTTGATAAAACGTGTGATTAAAAATATCCGTTGGTTTCTCTACAATGCATGCAACCATGTGACAGTGATATTGGATTCAAACACTCTTAATGACAGCGATTGTCAAGTCTTTGTTTGACGGTTGAGATTGCCTCTTAAAACATGTAGTGGGGACGGGGCTATCTCGTTATACAAAGTATTCGTCGTCTTGGCACAAAGTTAACCACAGATTTATTTGGAATTCGATCTCAGATTATCCTTCATATTCTTTCTGGAAAACATGAATACGAATCTGTTGTTGCTCAACTGGTGGTTTTCATTCAAGGTTTTGTACATTATTTGCAGGCGAATCCAATGAAGTTAGCTTTAAGGATAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGCAGTGTCGCAAAGTTTTGATGGCCAAACAGGTATCTTTCTGCCTTTACTTTTTCCAGATAGGTATTGACTTGAGGAAACACACGCATTTAACCTGCAAGACTTCATGCTCTGTACTTGCTAAGTTTTTTTTTTTTTTTTCAAGAATTAGTTCTGCAACTCCAAAAATTCACTTATATGTCCAAAAATAAATAAATACTCCATTTCACTTAGATTCCATGCAATGAAATGATATATTATGCTTAAAATAATGAAAATATGAAGTTTGAGCTTAGGAAATGTGATGTCTGATGATAGTAGGATGAATGTATTTGGTGTGTAGAAATGTGACTTTGATTTTGATTTATATATAATTTAAAATATAATGGTATTTTTCATAAGATATAATTACATCGAGAATATTTTGTTCAATATATTACCTACAATGAATTTCAAATAAATAAATCTTAATGTTTATTAACTATTTAGTTTTTAGTTTGTTTTTGAAATTTATGCTTGTTTTCTCCATTTTTCTTATCGTGGTTTTCACTATTCTTTTTTAGTAAAATAGTAATATTTAAATTCTTAAATAACTTACCGATGAAAAAGTAGTGTGTTTGAGTAAATGTCTTGTTCATTGGTGCCTCTTTTGCATTTTCATCGGAGAACAAGTACTGAATTTATTCTTGTTCTGCAACTGAGATTGAAGATTTCATTACCTACTGCTAAATTATGCAAAGATGACGCGCTGTTCAAATGCAGGATGTAATTGATAAGGCTCGGACTGTTCTTGTTGGGAACAGAAACATGCTACGCAAAATGCAAGCATCCATGGGCAAACCCTTTGTCAGCGATGACGATGATCCTGCATTTGTGCAATTCAAGCAGGTATCCATTGTAACACAGTGAAATGAACATTCTTGGAATTTTTTTTCTCAAGTGCTCTGTCATTTGCTTTATGTAAAAGGGTTGCAATTTCCAGGTGGTGCTTATAGTTTTTGTACCATTTGCCAGCAAGCATCCAATATTAAATATGCAAAAGGCTTTACTTACGATTGGATATCCACATTAGATGGTCTGTGGGTATTTCGATCTTTTGGATAAAGCTTACACAATCAAAATGTCTCGCCCTCTCCATGTAGAAGCGTCGTGTTTTGTAGTACTTGCTGTGTCATTTTTCAATGCTAAACCACATCCTGAATTTGTCTTCTGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAAATTGGTAAGAGGATTCTTTTCAAGCTTTCTTGCAATTGATGTTTAGACCTATGTGTTTTGAATTCTAGCTTACAATATGCTTAAAAATATTGTTTGGTCTTAATATTAATGACGAATCCTCTTAGCTTATGAATTTTTTTAAAAGTTTATAGTGTAAATATAAAAGTTTATAGATTAATATATACAGATTTCGTGTGGATGACTCTAAAAAGTAGTGATGTTTGCCTTTCCATGTAGAAACTAGAAAGTTAGGTAGTTTGATTTTTTTTTTCTTATTTAGCTTAATGATTAATGATTATATCTGATGTTTAATAATTGATGTCTTATTCATTAAGTTTGGATTTAGATTTAAATTGGGTTCATGTTTTTCATTCAATGTTGTATTAATGAGAGGTAACGTAGGGGAAGATGGCCAAGAGGACGCCGAGTCTAGTGACGTCAACAAGTTGCTATTCTCGGCTGTAGTGCAGGAATAATTCCAAACTATGCCAGGTATCTCTCTACCTAATTCCTTGTCCCACCCTTCCATCTACTAAAATCAAAATTATCGACTTATTTATCAATATTGACAAATTTCTAAAAAAAAAAATCCATGAAGCAAATGTTATTTAAAATTAATGAATAAACATTTACTTACTCAATGATAGTATGTATGTGTTAATAATAATTTTGGCATTTTCTTAATATTTTTGCGTTCAATTGAAAATATTAATATCAAAGCTTTCCATTTACAGATGCTTTAAAACAAATGCCAATACTTCCAAATGATTTCTTGTATGCTATATTTTAAGATGATTTTAACTTTTCTGTTGGCTCATACAGGTATTTTCATGACATACGAGACCATGAAGGAGAATCTGTGCACACAATTCACTTGAAGACGCTAAAGATGTCGAGAGGTTAAATGGCATGCTTAGCACACCTTGTGAGCCAAATGTAACTTCACTATGACATTCAATGAACAACATGAATTTGACTGATTCTGAAACAATATACAACGAATCTTAAAGCAGCAAAAACCCTGCGATCCATTCGCAAGCTGACTGCTCGATTTTAATGGAAGCTGCACTGGACGTTGGTTATGAGATTTAATAAAAATAATAATGACAAATTATAGTTGACTTGAT GCGGAAGGAGCTTCAAATTTAGAGAGCGCGAAAACCCTAGCAGAGAGAGGATGGCGCTCGATCGTCTTCATCAACATCATCAAGCAGCCGATGGATTGACGAACTTATTCACGAAGGCCAATCACGATCTCTCGGTTGTTCAATACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGACAGCGCGAATCCAATGAAGTTAGCTTTAAGGATAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGCAGTGTCGCAAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACTGTTCTTGTTGGGAACAGAAACATGCTACGCAAAATGCAAGCATCCATGGGCAAACCCTTTGTCAGCGATGACGATGATCCTGCATTTGTGCAATTCAAGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAAATTGGGGAAGATGGCCAAGAGGACGCCGAGTCTAGTGACGTCAACAAGTTGCTATTCTCGGCTGTAGTGCAGGAATAATTCCAAACTATGCCAGGTATTTTCATGACATACGAGACCATGAAGGAGAATCTGTGCACACAATTCACTTGAAGACGCTAAAGATGTCGAGAGGTTAAATGGCATGCTTAGCACACCTTGTGAGCCAAATGTAACTTCACTATGACATTCAATGAACAACATGAATTTGACTGATTCTGAAACAATATACAACGAATCTTAAAGCAGCAAAAACCCTGCGATCCATTCGCAAGCTGACTGCTCGATTTTAATGGAAGCTGCACTGGACGTTGGTTATGAGATTTAATAAAAATAATAATGACAAATTATAGTTGACTTGAT ATGGCGCTCGATCGTCTTCATCAACATCATCAAGCAGCCGATGGATTGACGAACTTATTCACGAAGGCCAATCACGATCTCTCGGTTGTTCAATACAGGCTCGAGAAGGAGTTTCAGCAAATCTATCCTGACAGCGCGAATCCAATGAAGTTAGCTTTAAGGATAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGCAGTGTCGCAAAGTTTTGATGGCCAAACAGGATGTAATTGATAAGGCTCGGACTGTTCTTGTTGGGAACAGAAACATGCTACGCAAAATGCAAGCATCCATGGGCAAACCCTTTGTCAGCGATGACGATGATCCTGCATTTGTGCAATTCAAGCAGATCACTGAAGAGTGGACAACACAAGTTCAATCAAAAATTGGGGAAGATGGCCAAGAGGACGCCGAGTCTAGTGACGTCAACAAGTTGCTATTCTCGGCTGTAGTGCAGGAATAA MALDRLHQHHQAADGLTNLFTKANHDLSVVQYRLEKEFQQIYPDSANPMKLALRIKKIRDDISTLKEQCRKVLMAKQDVIDKARTVLVGNRNMLRKMQASMGKPFVSDDDDPAFVQFKQITEEWTTQVQSKIGEDGQEDAESSDVNKLLFSAVVQE Homology
BLAST of CmaCh09G003940 vs. ExPASy Swiss-Prot
Match: Q8WVK7 (Spindle and kinetochore-associated protein 2 OS=Homo sapiens OX=9606 GN=SKA2 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.9e-04 Identity = 28/88 (31.82%), Postives = 46/88 (52.27%), Query Frame = 0
BLAST of CmaCh09G003940 vs. ExPASy TrEMBL
Match: A0A6J1IP41 (Protein FAM33A OS=Cucurbita maxima OX=3661 GN=LOC111477290 PE=3 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 7.7e-80 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CmaCh09G003940 vs. ExPASy TrEMBL
Match: A0A6J1F6V9 (Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.1e-77 Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0
BLAST of CmaCh09G003940 vs. ExPASy TrEMBL
Match: A0A6J1IQK7 (Protein FAM33A OS=Cucurbita maxima OX=3661 GN=LOC111477290 PE=3 SV=1) HSP 1 Score: 297.4 bits (760), Expect = 3.6e-77 Identity = 154/156 (98.72%), Postives = 154/156 (98.72%), Query Frame = 0
BLAST of CmaCh09G003940 vs. ExPASy TrEMBL
Match: A0A6J1FBS9 (Protein FAM33A OS=Cucurbita moschata OX=3662 GN=LOC111442663 PE=3 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 9.8e-75 Identity = 149/156 (95.51%), Postives = 151/156 (96.79%), Query Frame = 0
BLAST of CmaCh09G003940 vs. ExPASy TrEMBL
Match: A0A6J1CJF1 (Protein FAM33A OS=Momordica charantia OX=3673 GN=LOC111011710 PE=3 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 6.8e-68 Identity = 135/154 (87.66%), Postives = 143/154 (92.86%), Query Frame = 0
BLAST of CmaCh09G003940 vs. NCBI nr
Match: XP_022977128.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita maxima]) HSP 1 Score: 306.2 bits (783), Expect = 1.6e-79 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CmaCh09G003940 vs. NCBI nr
Match: XP_023534877.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78 Identity = 154/156 (98.72%), Postives = 155/156 (99.36%), Query Frame = 0
BLAST of CmaCh09G003940 vs. NCBI nr
Match: XP_022935897.1 (spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata]) HSP 1 Score: 298.1 bits (762), Expect = 4.4e-77 Identity = 151/156 (96.79%), Postives = 153/156 (98.08%), Query Frame = 0
BLAST of CmaCh09G003940 vs. NCBI nr
Match: XP_022977129.1 (spindle and kinetochore-associated protein 2 isoform X2 [Cucurbita maxima]) HSP 1 Score: 297.4 bits (760), Expect = 7.4e-77 Identity = 154/156 (98.72%), Postives = 154/156 (98.72%), Query Frame = 0
BLAST of CmaCh09G003940 vs. NCBI nr
Match: KAG6591515.1 (hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 296.2 bits (757), Expect = 1.7e-76 Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of CmaCh09G003940 vs. TAIR 10
Match: AT2G24970.1 (unknown protein; Has 33 Blast hits to 33 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 162.5 bits (410), Expect = 2.7e-40 Identity = 82/148 (55.41%), Postives = 113/148 (76.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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