CmaCh08G011880 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G011880
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr08: 7308911 .. 7309501 (-)
RNA-Seq Expression	CmaCh08G011880
Synteny	CmaCh08G011880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACTGAGATTCTACGACCTCAGGATTGTTTGAAAGGAAGGATCGGAGTTCCGCTGGTGGCCTTTTGTCGTCGCCGGAGTTCTTATGGAAACTCTGATTCGAATGTTTGTAACTATAATTCTAGATCCAACCGGAAATCAGCGGCTAGGTCGGAGCGGCCGGAGCAGCGGAAACGGTTTGTTTCGAATCAATCGGAGCCGTCGGTCTCGAAGAGATTGAGTTCCGAGGATTCGAAGACCAGGACGAATAGTTTGGTGATGGAAAATGTTACGATCTTGAGGCGTGGTGAATCGCTCGATTTGAAGACGAAGGGCGAAGCTCTGAAGAAGGAAGCTGATAATCTGGTCGTGTGTGGGACCGAGAGGTTGGGGCCGGCGCCGGAAATGGTACTGAAGCAGATCCGGATTGTCGACGTTAGGTATCCGATTATTGGGAAAGCCGATGTTTACGCCGGATCAGCGTTTTCGATGTCTCCATCTCCTAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACAGGTATCCACCATCGTTGATGACTCGGCCACAAGAGATCTGAGGCGTTTGCTTCGTCTCGACGCATGA

mRNA sequence

ATGGGGACTGAGATTCTACGACCTCAGGATTGTTTGAAAGGAAGGATCGGAGTTCCGCTGGTGGCCTTTTGTCGTCGCCGGAGTTCTTATGGAAACTCTGATTCGAATGTTTGTAACTATAATTCTAGATCCAACCGGAAATCAGCGGCTAGGTCGGAGCGGCCGGAGCAGCGGAAACGGTTTGTTTCGAATCAATCGGAGCCGTCGGTCTCGAAGAGATTGAGTTCCGAGGATTCGAAGACCAGGACGAATAGTTTGGTGATGGAAAATGTTACGATCTTGAGGCGTGGTGAATCGCTCGATTTGAAGACGAAGGGCGAAGCTCTGAAGAAGGAAGCTGATAATCTGGTCGTGTGTGGGACCGAGAGGTTGGGGCCGGCGCCGGAAATGGTACTGAAGCAGATCCGGATTGTCGACGTTAGGTATCCGATTATTGGGAAAGCCGATGTTTACGCCGGATCAGCGTTTTCGATGTCTCCATCTCCTAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACAGGTATCCACCATCGTTGATGACTCGGCCACAAGAGATCTGAGGCGTTTGCTTCGTCTCGACGCATGA

Coding sequence (CDS)

ATGGGGACTGAGATTCTACGACCTCAGGATTGTTTGAAAGGAAGGATCGGAGTTCCGCTGGTGGCCTTTTGTCGTCGCCGGAGTTCTTATGGAAACTCTGATTCGAATGTTTGTAACTATAATTCTAGATCCAACCGGAAATCAGCGGCTAGGTCGGAGCGGCCGGAGCAGCGGAAACGGTTTGTTTCGAATCAATCGGAGCCGTCGGTCTCGAAGAGATTGAGTTCCGAGGATTCGAAGACCAGGACGAATAGTTTGGTGATGGAAAATGTTACGATCTTGAGGCGTGGTGAATCGCTCGATTTGAAGACGAAGGGCGAAGCTCTGAAGAAGGAAGCTGATAATCTGGTCGTGTGTGGGACCGAGAGGTTGGGGCCGGCGCCGGAAATGGTACTGAAGCAGATCCGGATTGTCGACGTTAGGTATCCGATTATTGGGAAAGCCGATGTTTACGCCGGATCAGCGTTTTCGATGTCTCCATCTCCTAGTTCTCTTCCATTACCGTCGTTCTCGAAGAAGAAACAGGTATCCACCATCGTTGATGACTCGGCCACAAGAGATCTGAGGCGTTTGCTTCGTCTCGACGCATGA

Protein sequence

MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKRFVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCGTERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIVDDSATRDLRRLLRLDA

Homology

[Close]

BLAST of CmaCh08G011880 vs. ExPASy TrEMBL
Match: A0A6J1KIS0 (uncharacterized protein LOC111494337 OS=Cucurbita maxima OX=3661 GN=LOC111494337 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR 60
           MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR 60

Query: 61  FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120
           FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG
Sbjct: 61  FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV
Sbjct: 121 TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 197
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of CmaCh08G011880 vs. ExPASy TrEMBL
Match: A0A6J1EX01 (uncharacterized protein LOC111436920 OS=Cucurbita moschata OX=3662 GN=LOC111436920 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.3e-96
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR 60
           MGTEILRPQDCLKGRIGVPLVAFCRRR SYGNSDSNVCNYNSRSNRKSAARS+RPEQRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVCNYNSRSNRKSAARSDRPEQRKR 60

Query: 61  FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120
           FVSNQSEPSVSKR SSEDSKTRTNSLVMENVTILRRGESLD KTKGEALKKEADNLVVCG
Sbjct: 61  FVSNQSEPSVSKRSSSEDSKTRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEMVLKQIRIVDVR PI+GKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV
Sbjct: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 197
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of CmaCh08G011880 vs. ExPASy TrEMBL
Match: A0A5A7SWA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001050 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.4e-78
Identity = 167/200 (83.50%), Postives = 171/200 (85.50%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVC-NYNSRSNRKSAA---RSERPE 60
           MGTEILRPQDCL  RI VP  AFCRRRSSYGN DSN+C NYN RSNRKS A   RSERPE
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERSERPE 60

Query: 61  QRKRFVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNL 120
           QRKRFV N SEPSVSKR SS+D K   NSLVME VTILRRGESLD K K EALKKE DN+
Sbjct: 61  QRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNI 120

Query: 121 VVCGTERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQV 180
           VVCGT+RLGPAPE V KQIRIVDVR PI GKADVYAGSAFSMSPSPSSLPLPSFSKKK V
Sbjct: 121 VVCGTDRLGPAPETVAKQIRIVDVRCPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV 180

Query: 181 STIVDDSATRDLRRLLRLDA 197
           STIVDDSATRDLRRLLRLDA
Sbjct: 181 STIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of CmaCh08G011880 vs. ExPASy TrEMBL
Match: A0A1S3C7J3 (uncharacterized protein LOC103497904 OS=Cucumis melo OX=3656 GN=LOC103497904 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.4e-78
Identity = 167/200 (83.50%), Postives = 171/200 (85.50%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVC-NYNSRSNRKSAA---RSERPE 60
           MGTEILRPQDCL  RI VP  AFCRRRSSYGN DSN+C NYN RSNRKS A   RSERPE
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERSERPE 60

Query: 61  QRKRFVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNL 120
           QRKRFV N SEPSVSKR SS+D K   NSLVME VTILRRGESLD K K EALKKE DN+
Sbjct: 61  QRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNI 120

Query: 121 VVCGTERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQV 180
           VVCGT+RLGPAPE V KQIRIVDVR PI GKADVYAGSAFSMSPSPSSLPLPSFSKKK V
Sbjct: 121 VVCGTDRLGPAPETVAKQIRIVDVRCPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV 180

Query: 181 STIVDDSATRDLRRLLRLDA 197
           STIVDDSATRDLRRLLRLDA
Sbjct: 181 STIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of CmaCh08G011880 vs. ExPASy TrEMBL
Match: A0A0A0KCP9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G062315 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 9.1e-78
Identity = 166/200 (83.00%), Postives = 170/200 (85.00%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVC-NYNSRSNRKSAARS---ERPE 60
           MGTEILRPQDCL  RI VP  AFCRRRSSYGN DSN+C NYN RSNRKS ARS   ERPE
Sbjct: 1   MGTEILRPQDCLIERIRVPPAAFCRRRSSYGNYDSNICNNYNPRSNRKSVARSERPERPE 60

Query: 61  QRKRFVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNL 120
           QRKRFV N SEPSVSKR SS+D K   NSLVME VTILRRGESLD K K EALKKE DN+
Sbjct: 61  QRKRFVPNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNI 120

Query: 121 VVCGTERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQV 180
           VVCGT+RLGPAPE V KQIRIVDVR PI GKADVYAGSAFSMSPSPSSLPLPSFSKKK V
Sbjct: 121 VVCGTDRLGPAPETVAKQIRIVDVRSPIAGKADVYAGSAFSMSPSPSSLPLPSFSKKKHV 180

Query: 181 STIVDDSATRDLRRLLRLDA 197
           S IVDDSATRDLRRLLRLDA
Sbjct: 181 SAIVDDSATRDLRRLLRLDA 200

[Close]

BLAST of CmaCh08G011880 vs. NCBI nr
Match: XP_023000029.1 (uncharacterized protein LOC111494337 [Cucurbita maxima])

HSP 1 Score: 371.7 bits (953), Expect = 3.9e-99
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR 60
           MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR 60

Query: 61  FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120
           FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG
Sbjct: 61  FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV
Sbjct: 121 TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 197
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of CmaCh08G011880 vs. NCBI nr
Match: XP_023514741.1 (uncharacterized protein LOC111778959 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.9 bits (925), Expect = 6.9e-96
Identity = 192/196 (97.96%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR 60
           MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNV NYNSRSNRKSAARSERPEQRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVHNYNSRSNRKSAARSERPEQRKR 60

Query: 61  FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120
           FVSNQSEPSVSKR SSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG
Sbjct: 61  FVSNQSEPSVSKRSSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEMVLKQIRIVDVR PI+GKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV
Sbjct: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 197
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of CmaCh08G011880 vs. NCBI nr
Match: XP_022930480.1 (uncharacterized protein LOC111436920 [Cucurbita moschata])

HSP 1 Score: 360.5 bits (924), Expect = 9.0e-96
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR 60
           MGTEILRPQDCLKGRIGVPLVAFCRRR SYGNSDSNVCNYNSRSNRKSAARS+RPEQRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVCNYNSRSNRKSAARSDRPEQRKR 60

Query: 61  FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120
           FVSNQSEPSVSKR SSEDSKTRTNSLVMENVTILRRGESLD KTKGEALKKEADNLVVCG
Sbjct: 61  FVSNQSEPSVSKRSSSEDSKTRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEMVLKQIRIVDVR PI+GKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV
Sbjct: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 197
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of CmaCh08G011880 vs. NCBI nr
Match: KAG6593932.1 (hypothetical protein SDJN03_13408, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026274.1 hypothetical protein SDJN02_12774, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354.0 bits (907), Expect = 8.4e-94
Identity = 188/196 (95.92%), Postives = 190/196 (96.94%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR 60
           MGTEILRPQDCLKGRIGVPLVAFCRRR SYGNSDSNV NYNSRSNRKSAARS+RPEQRKR
Sbjct: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRGSYGNSDSNVYNYNSRSNRKSAARSDRPEQRKR 60

Query: 61  FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120
           FVSNQSEPSVSKR SSEDSK RTNSLVMENVTILRRGESLD KTKGEALKKEADNLVVCG
Sbjct: 61  FVSNQSEPSVSKRSSSEDSKIRTNSLVMENVTILRRGESLDSKTKGEALKKEADNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEMVLKQIRIVDVR PI+GKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV
Sbjct: 121 TERLGPAPEMVLKQIRIVDVRCPIVGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 197
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of CmaCh08G011880 vs. NCBI nr
Match: KAG6575030.1 (hypothetical protein SDJN03_25669, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013605.1 hypothetical protein SDJN02_23772, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315.1 bits (806), Expect = 4.3e-82
Identity = 170/196 (86.73%), Postives = 173/196 (88.27%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR 60
           MGTEILRPQDCL  RI VP   FCRRRSSYGN DSNVCNYNSRSNRK+AARSERPEQRKR
Sbjct: 1   MGTEILRPQDCLIERIRVPPAPFCRRRSSYGNYDSNVCNYNSRSNRKTAARSERPEQRKR 60

Query: 61  FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120
           FVSN SEPSVSKR SS+D K   NSLVME VTILRRGESLD K K EALKKE DNLVVCG
Sbjct: 61  FVSNHSEPSVSKRSSSDDLKAMKNSLVMEKVTILRRGESLDSKIKSEALKKEGDNLVVCG 120

Query: 121 TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKKQVSTIV 180
           TERLGPAPEM+ KQIRIVDVR PI GKADVYAGSAFSMSP PSSLPLPSFSKKK VSTIV
Sbjct: 121 TERLGPAPEMIPKQIRIVDVRCPISGKADVYAGSAFSMSPCPSSLPLPSFSKKKHVSTIV 180

Query: 181 DDSATRDLRRLLRLDA 197
           DDSATRDLRRLLRLDA
Sbjct: 181 DDSATRDLRRLLRLDA 196

[Close]

BLAST of CmaCh08G011880 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 68/199 (34.17%), Postives = 92/199 (46.23%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIGVPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSERPEQRKR 60
           MGTEI+RPQ+CL  R+                 DS    +NSR N        +P+QR+R
Sbjct: 1   MGTEIIRPQNCLVDRM----------------RDSPATFFNSRRNHFHRKPPLKPDQRRR 60

Query: 61  FVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEADNLVVCG 120
           F              S++ +T T ++V       R+GES D  +  +  K          
Sbjct: 61  F-------------GSDEFRTTTKNIVR------RKGESFDSFSNIKVRKYS-------- 120

Query: 121 TERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSA-FSMSPSPSSLPLPSFSKKKQVSTI 180
                                 P +   D+YAGS+ F++SP+PSSLPLPSFSKKK  S +
Sbjct: 121 ----------------------PEVSADDIYAGSSIFAVSPAPSSLPLPSFSKKKAKSQV 134

Query: 181 V----DDSATRDLRRLLRL 195
           V    DDSA++DLRRLLRL
Sbjct: 181 VVVSIDDSASQDLRRLLRL 134

[Close]

BLAST of CmaCh08G011880 vs. TAIR 10
Match: AT4G32020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25250.1); Has 65 Blast hits to 65 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09
Identity = 63/206 (30.58%), Postives = 91/206 (44.17%), Query Frame = 0


Query: 1   MGTEILRPQDCLKGRIG------VPLVAFCRRRSSYGNSDSNVCNYNSRSNRKSAARSER 60
           MG  +L PQDCLK           P     R++ +  N+ +      S+S+R S+     
Sbjct: 1   MGVAVLNPQDCLKDPFSHMKQHRNPSACPNRQKKTVSNNRTRRSPPRSQSSRSSSPPVAP 60

Query: 61  PEQRKRFVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEAD 120
           P    R   +   P  + +      K+ +N++ +  V IL+RGE          + KE  
Sbjct: 61  PLPPPRAAVSAFVPKGTLK------KSLSNTVAVSQVRILKRGEE---------IPKETS 120

Query: 121 NLVV-----CGTERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPS 180
           +LVV       T R+GP P ++  QIR+   +      A  YAG     SP PS +PLP+
Sbjct: 121 DLVVEMSDLGSTRRIGPDPGLIPGQIRLSGRKSK---SAPFYAGPVTMTSPPPSDVPLPA 179

Query: 181 FSKKKQVSTIVDDSATRDLRRLLRLD 196
           F  KK         AT DL R+LRLD
Sbjct: 181 FFTKK---------ATNDLIRILRLD 179

[Close]

BLAST of CmaCh08G011880 vs. TAIR 10
Match: AT4G02040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30 Blast hits to 30 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 3.5e-05
Identity = 44/146 (30.14%), Postives = 70/146 (47.95%), Query Frame = 0


Query: 39  NYNSRSNRKSAARSERPEQRKRFVSNQSEPSVSKRLSSE--DSKTRTNSLVMENVTILRR 98
           +Y+S+++R           + R   N S     ++ S     S     +LVME V IL+R
Sbjct: 6   SYSSQNHRFEHQTLIHRNPKPRLCRNSSTAPRRRKQSPTVVKSPAANPNLVMEQVKILKR 65

Query: 99  GESLDL-----------KTKGEALKKEAD-NLVVCGTERLGPAPEMVLKQIRIVDVRYPI 158
           GE+L              T+   LK   D +L+V  T R+GP PE+++KQI  + ++   
Sbjct: 66  GETLSAFNKNKENISSDDTRRPVLKMIKDVDLIVSATNRIGPEPEILMKQIGALGLQ--- 125

Query: 159 IGKADVYAGSAFSMSPSPSSLPLPSF 171
                 +AG+  S+SP PS +P+P F
Sbjct: 126 -----SFAGANCSLSPPPSCVPIPCF 143

[Close]

BLAST of CmaCh08G011880 vs. TAIR 10
Match: AT2G25250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32020.1); Has 30 Blast hits to 30 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 5.9e-05
Identity = 42/141 (29.79%), Postives = 66/141 (46.81%), Query Frame = 0


Query: 55  PEQRKRFVSNQSEPSVSKRLSSEDSKTRTNSLVMENVTILRRGESLDLKTKGEALKKEAD 114
           P + K+ ++N+   S S   S       +      +V IL+RGE +++K   E    +++
Sbjct: 23  PLRHKKPITNRRRRSPSSHQSQISHPPPSPHNHTNHVRILKRGEDINVKIPIEKPDLKSN 82

Query: 115 NLVVCGTERLGPAPEMVLKQIRIVDVRYPIIGKADVYAGSAFSMSPSPSSLPLPSFSKKK 174
                   ++G  P  +   IRI + +      A  YAG   S SP PS +PLP+F   K
Sbjct: 83  -------RQIGSDPMKISTPIRISNRKSM---PALFYAGPVTSTSPPPSEVPLPAFFANK 142

Query: 175 QVSTIVDDSATRDLRRLLRLD 196
            V+      AT DL ++LRLD
Sbjct: 143 TVAGFKPTDATNDLIKILRLD 153

The following BLAST results are available for this feature:

BLAST of CmaCh08G011880 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh08G011880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KIS0	1.9e-99	100.00	uncharacterized protein LOC111494337 OS=Cucurbita maxima OX=3661 GN=LOC111494337...	[more]
A0A6J1EX01	4.3e-96	96.94	uncharacterized protein LOC111436920 OS=Cucurbita moschata OX=3662 GN=LOC1114369...	[more]
A0A5A7SWA1	2.4e-78	83.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C7J3	2.4e-78	83.50	uncharacterized protein LOC103497904 OS=Cucumis melo OX=3656 GN=LOC103497904 PE=...	[more]
A0A0A0KCP9	9.1e-78	83.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G062315 PE=4 SV=1	[more]

BLAST of CmaCh08G011880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000029.1	3.9e-99	100.00	uncharacterized protein LOC111494337 [Cucurbita maxima]	[more]
XP_023514741.1	6.9e-96	97.96	uncharacterized protein LOC111778959 [Cucurbita pepo subsp. pepo]	[more]
XP_022930480.1	9.0e-96	96.94	uncharacterized protein LOC111436920 [Cucurbita moschata]	[more]
KAG6593932.1	8.4e-94	95.92	hypothetical protein SDJN03_13408, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6575030.1	4.3e-82	86.73	hypothetical protein SDJN03_25669, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmaCh08G011880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21570.1	1.2e-13	34.17	unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bac...	[more]
AT4G32020.1	1.8e-09	30.58	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G02040.1	3.5e-05	30.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G25250.1	5.9e-05	29.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF15365	PNRC	coord: 151..170 e-value: 2.0E-7 score: 31.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..61
None	No IPR available	PANTHER	PTHR33670	SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKE	coord: 1..195
None	No IPR available	PANTHER	PTHR33670:SF1	OS01G0384800 PROTEIN	coord: 1..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G011880.1	CmaCh08G011880.1	mRNA