CmaCh08G010960 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGAATAGAAGGAAAAGGGTATTCAATTTTGTTCGAAGCCAGTGCTGGTTTCTTTCTCTTGTCCTCATTTTCCCCGGTACACGAACGGAATAGATTTTTCTCGCGATCGGTTATTGTCTCAATTGGATTTTTCCGTCGATCAAATCGAATATTTCTGTACAATTTCGAACTAATTGTGGCGGAAGAGCAACGCATTTCGCAGAACTGAGCCCGTGATGAGTTACAGAAGGTTCGTATCCGAAATTTTAGTCAATTCCAAGTTCTTTTCTCGGTTATACGCTCAAAATTCACTTGAAGTGATTTAATTATTCCATGAGATTGTTCCGCTGCAATGTGAACCTATGATTTGGATCTGAGGATCTTTTTTTGGTTAAACTGAATAAGCTTCCGTTAGCGCCTGAAATTCTGATTATTACCTTATTTTATTGTCAATTCGTTGATTAACTCGCGTGGAGTTTCTGTGATCTTATATTTGGTAGCTTTTGTATGAATTTGGTTCTGATCTTGTGTTGTATTTTGAGTATGCTGTATGTTTGAGCTTTTAATGATGCAATTTGGGATAAAACAGAGTTTAAACTATAGAGCAGGTCATTGCACCGATTTTGTATGATAAAATGCGGTTTTCGATCTTGATGCATAACCGCGAGACAGAAGTGTGAAACCTATGATGAATTAAAAAGCTGCAAATGATTATTAGATTTTCTGCCGTGGTTTTAAGTTTTCGTGCATATTTTGAGAAGTAATTTGAATGAAAGCATAATGAGGTGAAATATCTCCGCAGTTCTGTTACTCTGGATGTTGGGGTCTATTAATCGTTTTGCGTCTTCCTCCTTGGTAACATGGAGTTAAATTGTAGTCTATTTTGGTTTTATTGATTAGATTTTGTTATACACATATACTACTCTTGAATACTCGTATCTCATTTTTTATACCACATATCTTATTTCATTTGAAATAACTGGTATCGATTTTGTTCATAGAGAGCACCGTTCTTCTAGATCTGCACTCTTTGATGACCTTGAGGAGGGTGGTCTCAGAGCTAGCGCTTCTGCGGTTGAAATTAAAGAGCATGACAATGATAGAGCGCTCCTCACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGGTTAGTTTTAAGCAGGGAAATTCTCCTTAATTATTTATTTATCTATGTCTGATCTCCCTTTATTATAATCTCCTGGCCGTTTTACTTAGCAAGCTGTTTTTATTTTTTTTTAAATTATAAACAATCATTTTGGCATTGGTATCTTGTAGCTGTTTCCTCGTTGCTGCATGCGCAAAATTTATTGCTTCAGATCCTTTTGCAATTCATCGATTCATCCTTTTACCTCAGATTCTTTAACCATTAGACAAAAATGATTAGGCAAATGGATATGAAGTGTATTCTTTGAGAATTTCTTCAGCTGTATTTATGCATCTAAGCATCCATATTTAGTACTATAATGAGCTCATTTCAAGTATGATTCTTGCCTGAAAGTGCCTTTGATGCAATAGACTGTTGTGCTTAGAGAGCTCTGGGATAAGTGAACTAGTTAATATTGACTTTTGAGTGGGTTTAGTTAGTTTATGTTCAGGTTGGACATAGTGGTAGAACACTTGGAGTTAATAAATAATGATAAGCGAACTCTTAGATTATGGGTCCAAATTTCCTTGTAATGACTAATGATATAGTAATTTTCAGTTTCTCACTGCTTACAATGGTGAATTTCTAGGAATAGAAATACTTTTGAGGATTGCTGAAGTATGAGATTTGGATTTTCGAGTGTGGAAAAAAAACTTACATATATGATTTCCTTACATAGTACTTAAAGTAACACTTCACTTCATGTGGATCAGCTTAAGTGATCACTATATAGCTCCATCATCCCTTGATATATATAACAAGAATTAGGGATCTTTTTGTACTTCGACTTAACTCTTAATATGCATATTATTTGAAATAGTTGACAGGTGACATTCATGAAGAAGTGGAGAGTCATAATAATTTACTTGACCGAATGGTATGTTGTTTCTTCAAGGTTATTTGTTTGTGTTTTGTCAGTGGAAAATGATAGGAGCATCTTCATATGGATTTTATTCTAATCCAGGGAAATGGCATGGATTCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTACATGATCTAAGCCTTTTTGAGTTCGTCATGTTTAGGGAATGTTTTTGTTCGTTATGTACCCTTTATAGGGAGAAAGAAAATGAAGAGAAATTGAGAGAGAGCTTTTGCAAGTTCAGCACTTGCATTGTTGGACTGAACTTGCAAAAAATCTATTTTGCTCCCAATATTTTTCTTCTTACTTAGTAAATGCAAACAACCATATATGTTCCAAAAAGTAAAATGATACAGAAAATCCAGTCCTAGAAATATGATAGAACATTCCTTGATCTTGTAAACGTCTACTACTTCCATGCATCCTCCTAATTTTTCCAAGTTCTCAATGTACATGTTCTGTAGGTTTTTGAGCAAAAATCGAAGTGGAGAACTTGTAGACTTGCAGTTTATTTTGTATTGTCCTTCTTACTTCTTTTCTATCTCATCAGGTAA GGAATAGAAGGAAAAGGGTATTCAATTTTGTTCGAAGCCAGTGCTGGTTTCTTTCTCTTGTCCTCATTTTCCCCGGTACACGAACGGAATAGATTTTTCTCGCGATCGGTTATTGTCTCAATTGGATTTTTCCGTCGATCAAATCGAATATTTCTGTACAATTTCGAACTAATTGTGGCGGAAGAGCAACGCATTTCGCAGAACTGAGCCCGTGATGAGTTACAGAAGAGAGCACCGTTCTTCTAGATCTGCACTCTTTGATGACCTTGAGGAGGGTGGTCTCAGAGCTAGCGCTTCTGCGGTTGAAATTAAAGAGCATGACAATGATAGAGCGCTCCTCACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGTTGACAGGTGACATTCATGAAGAAGTGGAGAGTCATAATAATTTACTTGACCGAATGGGAAATGGCATGGATTCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTTGAGCAAAAATCGAAGTGGAGAACTTGTAGACTTGCAGTTTATTTTGTATTGTCCTTCTTACTTCTTTTCTATCTCATCAGGTAA ATGAGTTACAGAAGAGAGCACCGTTCTTCTAGATCTGCACTCTTTGATGACCTTGAGGAGGGTGGTCTCAGAGCTAGCGCTTCTGCGGTTGAAATTAAAGAGCATGACAATGATAGAGCGCTCCTCACTTTGGAAGATAGAGTTTCTATTCTGAAGAGGTTGACAGGTGACATTCATGAAGAAGTGGAGAGTCATAATAATTTACTTGACCGAATGGGAAATGGCATGGATTCTTCAAGGGGTATAATGTCAAGAACCATGGATCGATTCAAGATGGTTTTTGAGCAAAAATCGAAGTGGAGAACTTGTAGACTTGCAGTTTATTTTGTATTGTCCTTCTTACTTCTTTTCTATCTCATCAGGTAA MSYRREHRSSRSALFDDLEEGGLRASASAVEIKEHDNDRALLTLEDRVSILKRLTGDIHEEVESHNNLLDRMGNGMDSSRGIMSRTMDRFKMVFEQKSKWRTCRLAVYFVLSFLLLFYLIR Homology
BLAST of CmaCh08G010960 vs. ExPASy Swiss-Prot
Match: Q94CG2 (Bet1-like SNARE 1-2 OS=Arabidopsis thaliana OX=3702 GN=BET12 PE=2 SV=4) HSP 1 Score: 144.1 bits (362), Expect = 1.1e-33 Identity = 78/124 (62.90%), Postives = 101/124 (81.45%), Query Frame = 0
BLAST of CmaCh08G010960 vs. ExPASy Swiss-Prot
Match: Q9M2J9 (Bet1-like SNARE 1-1 OS=Arabidopsis thaliana OX=3702 GN=BET11 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.1e-30 Identity = 74/122 (60.66%), Postives = 94/122 (77.05%), Query Frame = 0
BLAST of CmaCh08G010960 vs. ExPASy Swiss-Prot
Match: O35623 (BET1 homolog OS=Mus musculus OX=10090 GN=Bet1 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-04 Identity = 25/88 (28.41%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of CmaCh08G010960 vs. ExPASy Swiss-Prot
Match: Q62896 (BET1 homolog OS=Rattus norvegicus OX=10116 GN=Bet1 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 1.4e-04 Identity = 25/88 (28.41%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of CmaCh08G010960 vs. ExPASy Swiss-Prot
Match: O15155 (BET1 homolog OS=Homo sapiens OX=9606 GN=BET1 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 6.8e-04 Identity = 23/88 (26.14%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of CmaCh08G010960 vs. ExPASy TrEMBL
Match: A0A6J1KMZ6 (bet1-like SNARE 1-2 OS=Cucurbita maxima OX=3661 GN=LOC111494805 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.4e-57 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of CmaCh08G010960 vs. ExPASy TrEMBL
Match: A0A6J1EPS6 (bet1-like SNARE 1-2 OS=Cucurbita moschata OX=3662 GN=LOC111436741 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.4e-57 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of CmaCh08G010960 vs. ExPASy TrEMBL
Match: A0A0A0L808 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G469700 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 4.1e-52 Identity = 112/121 (92.56%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of CmaCh08G010960 vs. ExPASy TrEMBL
Match: A0A1S3BHN2 (bet1-like SNARE 1-2 OS=Cucumis melo OX=3656 GN=LOC103489954 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.5e-51 Identity = 110/121 (90.91%), Postives = 117/121 (96.69%), Query Frame = 0
BLAST of CmaCh08G010960 vs. ExPASy TrEMBL
Match: A0A6J1C943 (bet1-like SNARE 1-2 OS=Momordica charantia OX=3673 GN=LOC111009526 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.0e-51 Identity = 111/121 (91.74%), Postives = 116/121 (95.87%), Query Frame = 0
BLAST of CmaCh08G010960 vs. NCBI nr
Match: KAG7026182.1 (Bet1-like SNARE 1-2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 231.9 bits (590), Expect = 3.0e-57 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of CmaCh08G010960 vs. NCBI nr
Match: XP_022930222.1 (bet1-like SNARE 1-2 [Cucurbita moschata] >XP_023000563.1 bet1-like SNARE 1-2 [Cucurbita maxima] >XP_023513654.1 bet1-like SNARE 1-2 [Cucurbita pepo subsp. pepo] >KAG6593850.1 Bet1-like SNARE 1-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 231.9 bits (590), Expect = 3.0e-57 Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0
BLAST of CmaCh08G010960 vs. NCBI nr
Match: XP_038906834.1 (bet1-like SNARE 1-2 isoform X2 [Benincasa hispida]) HSP 1 Score: 214.5 bits (545), Expect = 4.9e-52 Identity = 112/121 (92.56%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of CmaCh08G010960 vs. NCBI nr
Match: XP_004151397.1 (bet1-like SNARE 1-2 [Cucumis sativus] >KGN58055.1 hypothetical protein Csa_010683 [Cucumis sativus]) HSP 1 Score: 213.8 bits (543), Expect = 8.4e-52 Identity = 112/121 (92.56%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of CmaCh08G010960 vs. NCBI nr
Match: XP_008447527.1 (PREDICTED: bet1-like SNARE 1-2 [Cucumis melo]) HSP 1 Score: 211.8 bits (538), Expect = 3.2e-51 Identity = 110/121 (90.91%), Postives = 117/121 (96.69%), Query Frame = 0
BLAST of CmaCh08G010960 vs. TAIR 10
Match: AT4G14455.1 (Target SNARE coiled-coil domain protein ) HSP 1 Score: 144.1 bits (362), Expect = 7.6e-35 Identity = 78/124 (62.90%), Postives = 101/124 (81.45%), Query Frame = 0
BLAST of CmaCh08G010960 vs. TAIR 10
Match: AT3G58170.1 (BET1P/SFT1P-like protein 14A ) HSP 1 Score: 134.0 bits (336), Expect = 7.9e-32 Identity = 74/122 (60.66%), Postives = 94/122 (77.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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