CmaCh07G012240 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G012240
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Cytochrome f
Location	Cma_Chr07: 6724202 .. 6725719 (+)
RNA-Seq Expression	CmaCh07G012240
Synteny	CmaCh07G012240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGGGAACAGGGGAAGGGGTCAGATTTATCCCGACGGGAGTAAGAGTAATAATAATGTTTATAATGCTACAACAGCAGGTATAGTAAGCAAAATAATACGAAAAGAAAAAGGAGGATATGAAATAACCATAGTGGATGCATCGAATGAGCGTCAAGTGGTTGATATTATCCCTCCAGAACCAGTACTTCTTGTTTCAGAGGGCGAATCTATCAAACTGGATCAACCATTAACGAGTAAGAGTAATCCTAACGTGGGAGGATTTGGTCAGGGAGATGCGGAAATAGTCCTTCAAGATCCATTACGTGTCCAAGGCCTTTTGTTCTTTTTTGCATCTGTTATTTTGGCACAAATCTTTTCCGTTCTTAAAAAGAAACAGTTTGATGATCACAAAATTATGAAAAACTTTTTTCTTGTTTTTGTTTATATTCTTTTTCTACCGTATTTCGGGAATGACTTGTACTGTATTATTAATCATAGTATGGATATTGTGAGGAAATAAGAACGGTATTATTATGTCACTGGTGCCCGATTGAAATGTCATTGAATGTATCTATTTTTATTCTAATAGAATGAAATTTGATTAGATATTAAAAATGGAGAATAGAAAAAATAAAATAATTAATAATTCTTTCGTCAAAGATCCCTATTCTTGGTTTCAATTTTTCCCGGTTTATCAGAACCGTTTGTTGATTTATTACATAAGTAGTTAACAAATTCAATGAATTTATAAATTCTATTTTATATTAAAATAACTCGAGAAAATTCTATTAGTATATTTTACTATATTAAAGGGTTTGTAATATCTGATAGAAATATATTATTGTTATATTGGGATTGTGTCATCCAGACAGAGGGAATGGAGTGATTCTCTGATACTATCGCGAAAGAGATGGTCTGGATCAATTTTTTTGAAGCAATTTAGAATCTGAAAGAAATAAGTTTTGTGGAAACATCGGAAAGATCCATTTTGTCATGTATATGAATAAATTATTCTAATTAGTAAGAGCTAAACGGAACCTACCCTTTTTTTTTTTCTGATTCGACGGGGATTCTGTTGAGTTCTTACGCTTCCATATCTACAACTCAGTTCATCCGATTATTATAGAGATGAACCTAATCCAGAATATGAATCATAAAAGAAAATACCGACTAAACCGATCACTGGAATACCAGTTATAGTACCTATTATCCAAAGAGGAATCCTTCCAGTAGTCTCGGCCATTTGTCCCACTTCCCTCCCCATTTCATAAAGTAGTCGTGCTAGAGACAGAAACAGTCATAGATAATTATGAGATGATATCCGAATGGAATAAGATAGTTCGTACTATTATTTAGTATTTTCTTTTATTTAATTGTAGAAATAATTGGAAAATAGAACAGCAAGTACAAAAATTAGTAATAACCCCAGTAAAGACCGGTACGATTCAATTCAACATTTTGTTCGTTCGGATTTGATTGTGTCATAGCTCTATAATTCAGATTAGGTTTATCGTTGGATGAACTGCATTGTTGA

mRNA sequence

ATGGTCGGGAACAGGGGAAGGGGTCAGATTTATCCCGACGGGAGTAAGAGTAATAATAATGTTTATAATGCTACAACAGCAGGTATAGTAAGCAAAATAATACGAAAAGAAAAAGGAGGATATGAAATAACCATAGTGGATGCATCGAATGAGCGTCAAGTGGTTGATATTATCCCTCCAGAACCAGTACTTCTTGTTTCAGAGGGCGAATCTATCAAACTGGATCAACCATTAACGAGTAAGAGTAATCCTAACGTGGGAGGATTTGGTCAGGGAGATGCGGAAATAGTCCTTCAAGATCCATTACGTGTCCAAGGCCTTTTATTAGGTTTATCGTTGGATGAACTGCATTGTTGA

Coding sequence (CDS)

ATGGTCGGGAACAGGGGAAGGGGTCAGATTTATCCCGACGGGAGTAAGAGTAATAATAATGTTTATAATGCTACAACAGCAGGTATAGTAAGCAAAATAATACGAAAAGAAAAAGGAGGATATGAAATAACCATAGTGGATGCATCGAATGAGCGTCAAGTGGTTGATATTATCCCTCCAGAACCAGTACTTCTTGTTTCAGAGGGCGAATCTATCAAACTGGATCAACCATTAACGAGTAAGAGTAATCCTAACGTGGGAGGATTTGGTCAGGGAGATGCGGAAATAGTCCTTCAAGATCCATTACGTGTCCAAGGCCTTTTATTAGGTTTATCGTTGGATGAACTGCATTGTTGA

Protein sequence

MVGNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEPVLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLLLGLSLDELHC

Homology

[Close]

BLAST of CmaCh07G012240 vs. ExPASy Swiss-Prot
Match: Q09X04 (Cytochrome f OS=Morus indica OX=248361 GN=petA PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 2.6e-48
Identity = 101/110 (91.82%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNAT+AGIVSKIIRKEKGGYEITIVDAS+ RQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNNVYNATSAGIVSKIIRKEKGGYEITIVDASDGRQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLLLGLS 113
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLLL L+
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLLLFLA 294

[Close]

BLAST of CmaCh07G012240 vs. ExPASy Swiss-Prot
Match: Q2QD76 (Cytochrome f OS=Cucumis sativus OX=3659 GN=petA PE=3 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 9.7e-48
Identity = 99/106 (93.40%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEKGGYEITIVDA+N RQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGGYEITIVDAANGRQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLL 109
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLL
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLL 290

[Close]

BLAST of CmaCh07G012240 vs. ExPASy Swiss-Prot
Match: Q0ZJ07 (Cytochrome f OS=Vitis vinifera OX=29760 GN=petA PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 8.2e-47
Identity = 98/110 (89.09%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNN VYNAT AGIVSKIIRKEKGGYEITI DAS+ RQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNATAAGIVSKIIRKEKGGYEITIADASDGRQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLLLGLS 113
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLR+QGLL  LS
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRIQGLLFFLS 294

[Close]

BLAST of CmaCh07G012240 vs. ExPASy Swiss-Prot
Match: Q9BBR8 (Cytochrome f OS=Lotus japonicus OX=34305 GN=petA PE=3 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-46
Identity = 95/110 (86.36%), Postives = 103/110 (93.64%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNATT+GI++KIIRK+KGGYEITIVDAS+ R+V+DIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNNVYNATTSGIINKIIRKDKGGYEITIVDASDGREVIDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLLLGLS 113
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLL  L+
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLLFFLA 294

[Close]

BLAST of CmaCh07G012240 vs. ExPASy Swiss-Prot
Match: Q49KY5 (Cytochrome f OS=Eucalyptus globulus subsp. globulus OX=71271 GN=petA PE=3 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.4e-46
Identity = 97/110 (88.18%), Postives = 100/110 (90.91%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNN VYNAT AG+VSKIIRKEKGGYEITI DAS+ERQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNATAAGVVSKIIRKEKGGYEITISDASDERQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLLLGLS 113
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDP RVQGLL  L+
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPFRVQGLLFFLA 294

[Close]

BLAST of CmaCh07G012240 vs. ExPASy TrEMBL
Match: A0A223A802 (Cytochrome f OS=Parasponia rugosa OX=1603294 GN=petA PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.5e-46
Identity = 102/110 (92.73%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEKGGYEITIV+AS+ERQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGGYEITIVEASDERQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLLLGLS 113
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLLL LS
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLLLFLS 294

[Close]

BLAST of CmaCh07G012240 vs. ExPASy TrEMBL
Match: A0A0S2ID44 (Cytochrome f OS=Cucurbita argyrosperma OX=34294 GN=petA PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.5e-46
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEKGGYEITIVDASNERQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLL 109
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLL
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLL 290

[Close]

BLAST of CmaCh07G012240 vs. ExPASy TrEMBL
Match: A0A2H4T200 (Cytochrome f OS=Cucurbita maxima OX=3661 GN=petA PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.5e-46
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEKGGYEITIVDASNERQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLL 109
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLL
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLL 290

[Close]

BLAST of CmaCh07G012240 vs. ExPASy TrEMBL
Match: A0A0S2IH73 (Cytochrome f OS=Cucurbita pepo var. texana OX=37651 GN=petA PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.5e-46
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEKGGYEITIVDASNERQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLL 109
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLL
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLL 290

[Close]

BLAST of CmaCh07G012240 vs. ExPASy TrEMBL
Match: A0A0S2IFV4 (Cytochrome f OS=Cucurbita pepo subsp. fraterna OX=37649 GN=petA PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.5e-46
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEKGGYEITIVDASNERQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLL 109
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLL
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLL 290

[Close]

BLAST of CmaCh07G012240 vs. NCBI nr
Match: YP_009529964.1 (cytochrome f [Parasponia rugosa] >ASR92911.1 cytochrome f [Parasponia rigida] >ASR92988.1 cytochrome f [Parasponia rugosa] >AXX77243.1 cytochrome f [Parasponia rugosa])

HSP 1 Score: 194.5 bits (493), Expect = 5.1e-46
Identity = 102/110 (92.73%), Postives = 104/110 (94.55%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEKGGYEITIV+AS+ERQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGGYEITIVEASDERQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLLLGLS 113
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLLL LS
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLLLFLS 294

[Close]

BLAST of CmaCh07G012240 vs. NCBI nr
Match: YP_009447463.1 (cytochrome f [Cucurbita maxima] >ALO21706.1 PetA [Cucurbita argyrosperma] >ALO21822.1 PetA [Cucurbita argyrosperma var. palmeri] >ALO21846.1 PetA [Cucurbita argyrosperma subsp. sororia] >ALO21921.1 PetA [Cucurbita cordata] >ALO22048.1 PetA [Cucurbita ecuadorensis] >ALO22252.1 PetA [Cucurbita lundelliana] >ALO22297.1 PetA [Cucurbita maxima subsp. andreana] >ALO22395.1 PetA [Cucurbita moschata] >ALO22439.1 PetA [Cucurbita okeechobeensis] >ALO22479.1 PetA [Cucurbita okeechobeensis subsp. martinezii] >ALO22548.1 PetA [Cucurbita pepo subsp. fraterna] >ALO22661.1 PetA [Cucurbita pepo subsp. ovifera] >ALO22730.1 PetA [Cucurbita pepo var. ozarkana] >ALO22803.1 PetA [Cucurbita pepo var. texana])

HSP 1 Score: 194.5 bits (493), Expect = 5.1e-46
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEKGGYEITIVDASNERQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLL 109
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLL
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLL 290

[Close]

BLAST of CmaCh07G012240 vs. NCBI nr
Match: MBC9853675.1 (hypothetical protein [Adiantum capillus-veneris])

HSP 1 Score: 194.5 bits (493), Expect = 5.1e-46
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEKGGYEITIVDASNERQVVDIIPP P
Sbjct: 406 GNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPGP 465

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLL 109
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLL
Sbjct: 466 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLL 509

[Close]

BLAST of CmaCh07G012240 vs. NCBI nr
Match: YP_009505093.1 (cytochrome f [Cucurbita pepo] >ALO22790.1 PetA [Cucurbita pepo subsp. pepo] >AWX90380.1 cytochrome f [Cucurbita pepo])

HSP 1 Score: 194.5 bits (493), Expect = 5.1e-46
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEKGGYEITIVDASNERQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLL 109
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLL
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLL 290

[Close]

BLAST of CmaCh07G012240 vs. NCBI nr
Match: YP_009447548.1 (cytochrome f [Cucurbita moschata] >ATY69986.1 cytochrome f [Cucurbita moschata])

HSP 1 Score: 194.5 bits (493), Expect = 5.1e-46
Identity = 101/106 (95.28%), Postives = 101/106 (95.28%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNNNVYNAT AGIVSKIIRKEKGGYEITIVDASNERQVVDIIPP P
Sbjct: 187 GNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPGP 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLL 109
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLL
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLL 290

[Close]

BLAST of CmaCh07G012240 vs. TAIR 10
Match: ATCG00540.1 (photosynthetic electron transfer A )

HSP 1 Score: 177.9 bits (450), Expect = 4.6e-45
Identity = 93/109 (85.32%), Postives = 97/109 (88.99%), Query Frame = 0


Query: 3   GNRGRGQIYPDGSKSNNNVYNATTAGIVSKIIRKEKGGYEITIVDASNERQVVDIIPPEP 62
           GNRGRGQIYPDGSKSNN VYNAT  GI+SKI+RKEKGGYEITIVDASN R+V+DIIP   
Sbjct: 187 GNRGRGQIYPDGSKSNNTVYNATAGGIISKILRKEKGGYEITIVDASNGREVIDIIPRGL 246

Query: 63  VLLVSEGESIKLDQPLTSKSNPNVGGFGQGDAEIVLQDPLRVQGLLLGL 112
            LLVSEGESIKLDQPLT  SNPNVGGFGQGDAEIVLQDPLRVQGLL  L
Sbjct: 247 ELLVSEGESIKLDQPLT--SNPNVGGFGQGDAEIVLQDPLRVQGLLFFL 293

The following BLAST results are available for this feature:

BLAST of CmaCh07G012240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09X04	2.6e-48	91.82	Cytochrome f OS=Morus indica OX=248361 GN=petA PE=3 SV=1	[more]
Q2QD76	9.7e-48	93.40	Cytochrome f OS=Cucumis sativus OX=3659 GN=petA PE=3 SV=1	[more]
Q0ZJ07	8.2e-47	89.09	Cytochrome f OS=Vitis vinifera OX=29760 GN=petA PE=3 SV=1	[more]
Q9BBR8	1.1e-46	86.36	Cytochrome f OS=Lotus japonicus OX=34305 GN=petA PE=3 SV=1	[more]
Q49KY5	1.4e-46	88.18	Cytochrome f OS=Eucalyptus globulus subsp. globulus OX=71271 GN=petA PE=3 SV=1	[more]

BLAST of CmaCh07G012240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A223A802	2.5e-46	92.73	Cytochrome f OS=Parasponia rugosa OX=1603294 GN=petA PE=3 SV=1	[more]
A0A0S2ID44	2.5e-46	95.28	Cytochrome f OS=Cucurbita argyrosperma OX=34294 GN=petA PE=3 SV=1	[more]
A0A2H4T200	2.5e-46	95.28	Cytochrome f OS=Cucurbita maxima OX=3661 GN=petA PE=3 SV=1	[more]
A0A0S2IH73	2.5e-46	95.28	Cytochrome f OS=Cucurbita pepo var. texana OX=37651 GN=petA PE=3 SV=1	[more]
A0A0S2IFV4	2.5e-46	95.28	Cytochrome f OS=Cucurbita pepo subsp. fraterna OX=37649 GN=petA PE=3 SV=1	[more]

BLAST of CmaCh07G012240 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009529964.1	5.1e-46	92.73	cytochrome f [Parasponia rugosa] >ASR92911.1 cytochrome f [Parasponia rigida] >A...	[more]
YP_009447463.1	5.1e-46	95.28	cytochrome f [Cucurbita maxima] >ALO21706.1 PetA [Cucurbita argyrosperma] >ALO21...	[more]
MBC9853675.1	5.1e-46	95.28	hypothetical protein [Adiantum capillus-veneris]	[more]
YP_009505093.1	5.1e-46	95.28	cytochrome f [Cucurbita pepo] >ALO22790.1 PetA [Cucurbita pepo subsp. pepo] >AWX...	[more]
YP_009447548.1	5.1e-46	95.28	cytochrome f [Cucurbita moschata] >ATY69986.1 cytochrome f [Cucurbita moschata]	[more]

BLAST of CmaCh07G012240 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00540.1	4.6e-45	85.32	photosynthetic electron transfer A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002325	Cytochrome f	PRINTS	PR00610	CYTOCHROMEF	coord: 98..118 score: 50.72 coord: 5..28 score: 78.08 coord: 77..97 score: 66.46
IPR002325	Cytochrome f	PFAM	PF01333	Apocytochr_F_C	coord: 18..109 e-value: 2.7E-29 score: 101.6
IPR002325	Cytochrome f	PROSITE	PS51010	CYTF	coord: 1..118 score: 32.366165
None	No IPR available	GENE3D	2.40.50.100		coord: 22..80 e-value: 3.4E-24 score: 86.6
None	No IPR available	PANTHER	PTHR33288	FAMILY NOT NAMED	coord: 3..111
None	No IPR available	PANTHER	PTHR33288:SF9	CYTOCHROME F	coord: 3..111
IPR036826	Cytochrome f large domain superfamily	GENE3D	2.60.40.830	Cytochrome f large domain	coord: 1..105 e-value: 8.8E-18 score: 66.8
IPR036826	Cytochrome f large domain superfamily	SUPERFAMILY	49441	Cytochrome f, large domain	coord: 3..103
IPR011054	Rudiment single hybrid motif	SUPERFAMILY	51246	Rudiment single hybrid motif	coord: 19..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G012240.1	CmaCh07G012240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0031361	integral component of thylakoid membrane
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding