CmaCh07G008980 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTCTCAACAAGCCCTCTTTCTCTCTCGCTAGGGCTCTGGCGGAAGAACCGCCGAATAAAACCCTAAATCTTACTCAGATTCTTCCGTAGTTAGGCTCTCCGGACTCCAATCCAAGAAGATGGGAGGAAAGTGCCCTCACAGAAGCGTCAAGAAGCGGAGATACTCGCACAAGTCCGCTAGGCGTACGAAATTTCTCATCAATGATATCCTTTTACTCTCTAGTTTAATGGGATTTCCCCTTTCAATTCTTCTTATGTTTCCTGTATTATTTACGTTTTTTTTTTTTTTGGTATTTTACTTAACTCAATGAATTGGTGAATCACGCGACGATATGGTTTACGATGCGTTGAAGAAACCTGAGGTGGAGAGGCCTTCTCTACCTGTTGATGAAGACTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGAGTAAGTTCTTTCCTCCGTTAATGTTTTTTTATTACTTGACTTCAAATTCCTGTAGAAAATTGCTTCTCATGCAAGTTGAATCAGTCGAATTTAATATCAAGGAATAAATTTCATTTAATTCCATTCTGACTTTAAATGAATCATTAGTGTTCATGATTAGGTTTAGATGGAGCTGGAGGGCTGAAATATTTAGTGAAGTATTGTTAGCTTCATCTTGAATGAAATTCAGAAATAAATTTTGAGGTTTACTACTTATAAGGGATTAGTGGAATGGGAAAAACAGTGTAGTGGGTTGGGGCTTACGAATTTTGATTTAATTACTGATGGCGGTTGGAGTTCTATAATATTTGTATTCATGATTGGTGGTTTCAGCCGGTACTTTGCGAATGTATCTGTGAGGGATGAACATTTCAAGACCAAGCGCCACAGGAAGCGGTAAGCTATGCCAATTTTCACTTGCTCTTGCTTCATTTTGTTACGTTGTTAATTCGCTTTTATTTTTTGCTTAGTGAATCTGTAGACAATTTCACGTAATGAATTGTTCTCTCTCTATTGGTGTGTAGGTAAAATTATAACTTAATTTTTAAAAATGGAATGAACTACCTTACGCCTTGCTTGATAACCATTTGGATTTTGGTTTATGAAAACTAAGGTTGTTTTCAAAATTTGACTTGGATTTGGAAAATATATGTGGAAAGTAGATAACGAAACAATGATACCCATCAATAGAAGTAGCGTTTACAAATTCAATTTTCGAAAACAAAAAAGTGATCAACGGGGCCTTAATTTCTTAAGTTTCCTCTCTCGATCCTTTCTTAATATGTTATAGATATGGCACATGTGTTTGTGACTCTGATTACATTCATTTGATTGTAAGATATGAAGTTGGTATGATTGTATTAGAGAAGAGCATTTGATTTGCAATTGTTAACAATGTTACTATCCACAACGACAATGGTGCAGGGTAAAACTTATGATGGGTCCTGCACCCCACACGCAACTGGACGCCGATTTAGCTGCTGGGATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGAGCTTATCACACAACTTAAATCATTTTTGGTGTTGTAGAGAGCTTAGAATGAGGTTTGTTTCTTGTTTAACCAAAAGGATCAATTTTATCATACATTTTATGCCCATGTATTGTATTTGCAGAGTTCGTTTTATGAATCAATTTTAGCTTCTTATTTCACACCAGCTTCCTAGTTTTGTGTTATGTTACATTCTTACCTAATATAACCCCATGGCTCTTCTTAGTGAT CCTCTCAACAAGCCCTCTTTCTCTCTCGCTAGGGCTCTGGCGGAAGAACCGCCGAATAAAACCCTAAATCTTACTCAGATTCTTCCGTAGTTAGGCTCTCCGGACTCCAATCCAAGAAGATGGGAGGAAAGTGCCCTCACAGAAGCGTCAAGAAGCGGAGATACTCGCACAAGTCCGCTAGGCGTACGAAATTTCTCATCAATGGCGACGATATGGTTTACGATGCGTTGAAGAAACCTGAGGTGGAGAGGCCTTCTCTACCTGTTGATGAAGACTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGACCGGTACTTTGCGAATGTATCTGTGAGGGATGAACATTTCAAGACCAAGCGCCACAGGAAGCGGGTAAAACTTATGATGGGTCCTGCACCCCACACGCAACTGGACGCCGATTTAGCTGCTGGGATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGAGCTTATCACACAACTTAAATCATTTTTGGTGTTGTAGAGAGCTTAGAATGAGGTTTGTTTCTTGTTTAACCAAAAGGATCAATTTTATCATACATTTTATGCCCATGTATTGTATTTGCAGAGTTCGTTTTATGAATCAATTTTAGCTTCTTATTTCACACCAGCTTCCTAGTTTTGTGTTATGTTACATTCTTACCTAATATAACCCCATGGCTCTTCTTAGTGAT ATGGGAGGAAAGTGCCCTCACAGAAGCGTCAAGAAGCGGAGATACTCGCACAAGTCCGCTAGGCGTACGAAATTTCTCATCAATGGCGACGATATGGTTTACGATGCGTTGAAGAAACCTGAGGTGGAGAGGCCTTCTCTACCTGTTGATGAAGACTTGCCTGGAATGGGGCAGTACTACTGCTTGCACTGCGACCGGTACTTTGCGAATGTATCTGTGAGGGATGAACATTTCAAGACCAAGCGCCACAGGAAGCGGGTAAAACTTATGATGGGTCCTGCACCCCACACGCAACTGGACGCCGATTTAGCTGCTGGGATGGGCATGCCTGATAATGGTCCAAAGCTTATGGCAATGTGA MGGKCPHRSVKKRRYSHKSARRTKFLINGDDMVYDALKKPEVERPSLPVDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHRKRVKLMMGPAPHTQLDADLAAGMGMPDNGPKLMAM Homology
BLAST of CmaCh07G008980 vs. ExPASy Swiss-Prot
Match: B0BLT0 (Zinc finger protein 593 OS=Xenopus tropicalis OX=8364 GN=znf593 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.5e-13 Identity = 47/106 (44.34%), Postives = 64/106 (60.38%), Query Frame = 0
BLAST of CmaCh07G008980 vs. ExPASy Swiss-Prot
Match: Q08004 (Bud site selection protein 20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BUD20 PE=1 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.3e-11 Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 0
BLAST of CmaCh07G008980 vs. ExPASy Swiss-Prot
Match: Q9U239 (Zinc finger protein 593 homolog OS=Caenorhabditis elegans OX=6239 GN=Y56A3A.18 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.2e-10 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 0
BLAST of CmaCh07G008980 vs. ExPASy Swiss-Prot
Match: Q553S1 (Zinc finger protein 593 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0275351 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.2e-10 Identity = 38/117 (32.48%), Postives = 58/117 (49.57%), Query Frame = 0
BLAST of CmaCh07G008980 vs. ExPASy Swiss-Prot
Match: Q9P370 (Zinc finger protein bud20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bud20 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.4e-09 Identity = 36/105 (34.29%), Postives = 58/105 (55.24%), Query Frame = 0
BLAST of CmaCh07G008980 vs. TAIR 10
Match: AT2G36930.1 (zinc finger (C2H2 type) family protein ) HSP 1 Score: 191.8 bits (486), Expect = 3.1e-49 Identity = 86/116 (74.14%), Postives = 100/116 (86.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|