CmaCh07G005350 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAGCATGTGAAAAAGAGTATGGCAAGGCAGAAAAATGGCGTCCAAATCTGCACTCCCGTTTCTTATCCTCGCGCACCTCCTCCTACTCTCCACCGCCGCCGTGCCGGAGGCTGTAGATGTAAGAACACCACCATCCTCCGCCCTCTCTAAAGCGTTGAATAAAATTAACCAAGTGTGTTTTGATTTGAAATGGTGCAGGGCGGGGAGTGCGGTTACTTGATCTATGTCCAAACAGGGACGGTGAAGAAGGCCGGCACGCACTCAACCATCGGCCTGGAGGTGAAGACGGCGTCTGGGGAGGGGATTTGGGTGCCTAATTTGGAGGAATGGGGTGGAATTATGGGTCCAGATTATAACTTCTTTGAGACCGGGAGATTGGATATCTTCACTGGCAGAGGGCCTTGCCTCACGTCCCCTATTTGCTCTCTCAATTTGACCTCCAATGGCTCCGGTCCCTACCACGCTTGGTACTGTGACTACGTCGAGGTCACGGCCTCTGCCCCAGGCCATCCTTGCCACAAGCAGCGCTTCTCGGTGAACCAGTGGCTTGCCACTGACCATGAGCCCTACAGCCTCACCGCTGTTGTGGACTATTGTGGGGTTCGCCCAGATCCCAGTGTGTATGACGTGGTTTTCTAAATCTCTACTCTTCTCATCAGAGTAGCTACAAGAAGATTATTAATAAAAATAATAAAAATGATTTGGATAATGAGAAAACAACCTCTATTATTATACAACTAAATGAATTAGGTACATGGTAGAAAAGGTACAAAAATAAAGTATTTATGAACCAAACGTTCATGACAATTTCATTACCATGCGGTGAAAACGAGGCATAATTTTTCAGACGGGCCTTCCTAGTAATGTCCAG TGAAGCATGTGAAAAAGAGTATGGCAAGGCAGAAAAATGGCGTCCAAATCTGCACTCCCGTTTCTTATCCTCGCGCACCTCCTCCTACTCTCCACCGCCGCCGTGCCGGAGGCTGTAGATGGCGGGGAGTGCGGTTACTTGATCTATGTCCAAACAGGGACGGTGAAGAAGGCCGGCACGCACTCAACCATCGGCCTGGAGGTGAAGACGGCGTCTGGGGAGGGGATTTGGGTGCCTAATTTGGAGGAATGGGGTGGAATTATGGGTCCAGATTATAACTTCTTTGAGACCGGGAGATTGGATATCTTCACTGGCAGAGGGCCTTGCCTCACGTCCCCTATTTGCTCTCTCAATTTGACCTCCAATGGCTCCGGTCCCTACCACGCTTGGTACTGTGACTACGTCGAGGTCACGGCCTCTGCCCCAGGCCATCCTTGCCACAAGCAGCGCTTCTCGGTGAACCAGTGGCTTGCCACTGACCATGAGCCCTACAGCCTCACCGCTGTTGTGGACTATTGTGGGGTTCGCCCAGATCCCAGTGTGTATGACGTGGTTTTCTAAATCTCTACTCTTCTCATCAGAGTAGCTACAAGAAGATTATTAATAAAAATAATAAAAATGATTTGGATAATGAGAAAACAACCTCTATTATTATACAACTAAATGAATTAGGTACATGGTAGAAAAGGTACAAAAATAAAGTATTTATGAACCAAACGTTCATGACAATTTCATTACCATGCGGTGAAAACGAGGCATAATTTTTCAGACGGGCCTTCCTAGTAATGTCCAG ATGGCGTCCAAATCTGCACTCCCGTTTCTTATCCTCGCGCACCTCCTCCTACTCTCCACCGCCGCCGTGCCGGAGGCTGTAGATGGCGGGGAGTGCGGTTACTTGATCTATGTCCAAACAGGGACGGTGAAGAAGGCCGGCACGCACTCAACCATCGGCCTGGAGGTGAAGACGGCGTCTGGGGAGGGGATTTGGGTGCCTAATTTGGAGGAATGGGGTGGAATTATGGGTCCAGATTATAACTTCTTTGAGACCGGGAGATTGGATATCTTCACTGGCAGAGGGCCTTGCCTCACGTCCCCTATTTGCTCTCTCAATTTGACCTCCAATGGCTCCGGTCCCTACCACGCTTGGTACTGTGACTACGTCGAGGTCACGGCCTCTGCCCCAGGCCATCCTTGCCACAAGCAGCGCTTCTCGGTGAACCAGTGGCTTGCCACTGACCATGAGCCCTACAGCCTCACCGCTGTTGTGGACTATTGTGGGGTTCGCCCAGATCCCAGTGTGTATGACGTGGTTTTCTAA MASKSALPFLILAHLLLLSTAAVPEAVDGGECGYLIYVQTGTVKKAGTHSTIGLEVKTASGEGIWVPNLEEWGGIMGPDYNFFETGRLDIFTGRGPCLTSPICSLNLTSNGSGPYHAWYCDYVEVTASAPGHPCHKQRFSVNQWLATDHEPYSLTAVVDYCGVRPDPSVYDVVF Homology
BLAST of CmaCh07G005350 vs. ExPASy Swiss-Prot
Match: O65660 (PLAT domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLAT1 PE=1 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 1.4e-42 Identity = 84/163 (51.53%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of CmaCh07G005350 vs. ExPASy Swiss-Prot
Match: Q9SIE7 (PLAT domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLAT2 PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.9e-39 Identity = 81/161 (50.31%), Postives = 106/161 (65.84%), Query Frame = 0
BLAST of CmaCh07G005350 vs. ExPASy Swiss-Prot
Match: Q2V2V3 (PLAT domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLAT3 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 4.1e-26 Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 0
BLAST of CmaCh07G005350 vs. ExPASy TrEMBL
Match: A0A6J1KV14 (PLAT domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111497461 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 2.9e-99 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CmaCh07G005350 vs. ExPASy TrEMBL
Match: A0A6J1HE92 (PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463386 PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 2.3e-93 Identity = 166/177 (93.79%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of CmaCh07G005350 vs. ExPASy TrEMBL
Match: A0A6J1BY14 (PLAT domain-containing protein 3-like OS=Momordica charantia OX=3673 GN=LOC111005762 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 7.8e-65 Identity = 126/175 (72.00%), Postives = 141/175 (80.57%), Query Frame = 0
BLAST of CmaCh07G005350 vs. ExPASy TrEMBL
Match: A0A6J1KL50 (PLAT domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111496734 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 2.8e-46 Identity = 95/173 (54.91%), Postives = 124/173 (71.68%), Query Frame = 0
BLAST of CmaCh07G005350 vs. ExPASy TrEMBL
Match: A0A6J1HHM4 (PLAT domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111463559 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.8e-45 Identity = 95/173 (54.91%), Postives = 123/173 (71.10%), Query Frame = 0
BLAST of CmaCh07G005350 vs. NCBI nr
Match: XP_023004029.1 (PLAT domain-containing protein 3-like [Cucurbita maxima] >XP_023004030.1 PLAT domain-containing protein 3-like [Cucurbita maxima]) HSP 1 Score: 370.9 bits (951), Expect = 5.9e-99 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CmaCh07G005350 vs. NCBI nr
Match: XP_023518309.1 (PLAT domain-containing protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 354.8 bits (909), Expect = 4.4e-94 Identity = 167/174 (95.98%), Postives = 169/174 (97.13%), Query Frame = 0
BLAST of CmaCh07G005350 vs. NCBI nr
Match: XP_022963077.1 (PLAT domain-containing protein 3-like [Cucurbita moschata]) HSP 1 Score: 351.3 bits (900), Expect = 4.8e-93 Identity = 166/177 (93.79%), Postives = 169/177 (95.48%), Query Frame = 0
BLAST of CmaCh07G005350 vs. NCBI nr
Match: KAG6594871.1 (PLAT domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 349.0 bits (894), Expect = 2.4e-92 Identity = 165/177 (93.22%), Postives = 168/177 (94.92%), Query Frame = 0
BLAST of CmaCh07G005350 vs. NCBI nr
Match: KAG7026836.1 (PLAT domain-containing protein 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 346.7 bits (888), Expect = 1.2e-91 Identity = 163/177 (92.09%), Postives = 167/177 (94.35%), Query Frame = 0
BLAST of CmaCh07G005350 vs. TAIR 10
Match: AT4G39730.1 (Lipase/lipooxygenase, PLAT/LH2 family protein ) HSP 1 Score: 174.1 bits (440), Expect = 9.8e-44 Identity = 84/163 (51.53%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of CmaCh07G005350 vs. TAIR 10
Match: AT2G22170.1 (Lipase/lipooxygenase, PLAT/LH2 family protein ) HSP 1 Score: 163.7 bits (413), Expect = 1.3e-40 Identity = 81/161 (50.31%), Postives = 106/161 (65.84%), Query Frame = 0
BLAST of CmaCh07G005350 vs. TAIR 10
Match: AT5G65158.1 (Lipase/lipooxygenase, PLAT/LH2 family protein ) HSP 1 Score: 119.4 bits (298), Expect = 2.9e-27 Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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