Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAACCAAAATTAAGGAGACAAATAACAACTTCATTTCGTTTCATTCCAAATCCAATTCCCCTTTTACCCATCAATTGATTGATATTTATTCAATCAACTTCCCCCTCTGCGACTCGGCAATCCCAATCTGCGGCATCTTCCCCCTCTTCCCATTTCTCTCTCTGTTTTCTCTCGATCGTTCGCCCCTATTCGAGAGAGATCGGAAGCGGATTCGGGATGAGGGAAATCATCAGTCTTCACATTGGTCAAGCTGGGATTCAGGTCGGCAATTCTTGCTGGGAGCTTTACTGCCTCGAGCATGGCATCCAGCCTGATGGTTTGATGCCCAGGTTTGTATTTCGATTTCTTGATTTGGGTTTCATTTTGAATGTCGATCGATATCAACCACGCCCCACTTCTGATCCTCGATTACTTTTTTACTAGATAAATTCAATTTTCCCTGTTGTGATTCTCTATGGTAGGTGGGAGTGGGAGTGGGACTGAATTGAATTCGTGAATTTCGTTTACGTCTTTCTTTTGGTCTTTGAATTTTTGTGGCATTTTCCGCATCTGTTTATGCGTCAAGTTCTTGTGAGATCAGACGAGGAATCTGGACATGGGTTTAAATTTTAATTGGATGTACCTATATGGATCTCCTTTTCAAATTGGAGTAACAAGTCTGAGCTCGTAGGAATTGAAAATTCGCTTCGAGTTTAATCCAATTGATTTAATTATCCTTTTCTCCGGGAATATCAAGTCGAATGGCCAAACTTTTGGGCTTTTTTATCCTCAGATTGTTTGCTGTAATGTCACTCTTAAGATGGGAATAGATGCCTCGATCCAATTCCTATATCTGTTCAAGAAAATAAGTTCTTGGGGTCTTCTCGGAGGTCATTTTGGTTGAAACAATATTTACTGAATTTTTGGATTGGATCTTTTGTTTATGTGGCGTCTTTGATAGTGGGTGGCATAAAAAGTCGTTTTATTTACATACCCTTTCAAGGTCCAAGCATAATGACCCATCTCGATGAATTAGAACTCTTATTCTAATGATGTTTGATTACCTGCGTATGCTGCAGTGACACCTCGGTTGGTGTAGCACACGATGCTTTCAACACATTTTTCAGCGAGACTGGTTCGGGCAAGCACGTTCCTAGAGCTATATTTGTGGATCTCGAACCAACTGTTATTGATGAAGTGAGGACTGGGACATATAGACAGCTTTTCCACCCGGAACAGCTCATATCTGGTAAAGAAGATGCTGCAAATAATTTTGCCCGAGGACATTATACAGGTACATGTATTTCCATTTCGACAAGTTTTTCTAGAGTTTCCTTTTTCACTGTGGTCATTCATCACTAAACCTACTTTATTGTGTCATTTCCCAGTGGGTAGGGAAATAGTTGATCTGTGCCTTGACCGAGTTCGAAAACTAGCCGACAATTGTACTGGTTTGCAAGGGTTCTTAGTGTTTAATGCTGTTGGTGGTGGCACTGGATCTGGTTTGGGGTCGTTACTTCTGGAACGCTTGTCCGTGGATTATGGAAAGAAGTCAAAGCTTGGATTTTCCATATATCCTTCTCCACAGGTACACAAATGATAGACGCTTTGGTATCATAGACCACATATTTTTCATTGATGAAGCGTATATGAAAAGGCCACTTATATTTGTCACAATTTTTTCTCAATGAAATTTTGTTTCTTGTCAGATAAAAGATTAAAGAAAAAAAAAGAATCTGTTTCTGCTCAGTTGACAATATTTTTTATGCAAACCTTTAAATCTTTCTTACTGATCATCAAGATTCAAGTCTATTATTTAATGCTACAATATCTGTATGCAGGTATCCACTGCCGTGGTCGAACCATACAACAGTGTGCTTTCCACTCATTCTCTGCTAGAACACACAGATGTCGCTGTGCTTCTGGACAACGAAGCCATTTATGATATCTGCAGGAGATCATTGGATATTGAAAGACCAACTTACACCAACTTGAACCGCTTGATATCCCAAGTTATCTCTTCTTTAACCACTTCCTTGAGGTTTGATGGTGCTATCAACGTGGATATAACCGAGTTTCAAACTAACCTTGTACCTTATCCACGTATTCATTTCATGCTCTCTTCTTATGCTCCTGTGATCTCTTCTGCAAAAGCTTACCATGAGCAGCTATCTGTTCCCGAAATCACCAATGCCGTATTTGATCCTTCAAGCATGATGGTCAAATGCGACCCAAGGCACGGAAAGTACATGGCATGCTGTTTGATGTATAGAGGAGATGTTGTACCCAAGGATGTGAATGCTGCTGTTGCTACCATCAAAACGAAGAGAACAGTTCAATTTGTTGACTGGTGAGTTAATTGCTCAGGGTTGTTAGAATTATGAAACCAATGATATTTGTGTTATCAAAGGGTCCATATCTTAATGCTGAAGTTGTTTAGAAGTCTTGGAGGCAAATTTTTCAATCTCATCCTGAACTAAACTTTCCCAGAGGATCTTAGTTTGGTTTAGTTAATTGAAATTTCTAAACGTTATTGATTTGAGTTAAACCTGTGGCATGGGAATTTTTCAGGTGTCCTACTGGCTTCAAATGTGGTATTAACTATCAACCCCCAAGTGTTGTTCCTGGGGGCGATCTTGCGAAGGTGCAGCGAGCTGTTTGTATGATAAGTAATAGCACAGCCGTGGCCGAGGTCTTTTCAAGAATCGATCACAAATTTGATCTGATGTATGCTAAGCGGGCATTCGTACATTGGTACGTGGGTGAGGGCATGGAGGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTTGCTGCTCTAGAAAAGGACTACGAGGAAGTTGGTGCGGAGGATGTGGATGAAGAGGAGGAAGGGGAAGATTATTAAACCAGGAGTGATAAATAGCTGGTGGTGTCCTTTTTCATCGTTTTCATGTTTCTTTGTTATCAAGTCCAAGCTGTGCAATGTTCCATACATGTTGACGAGTGGTTTCTGTTTTTATGATTGATTTCAAAATTTACAGTGTTAGAACTACTTGCAAATTTTTTATTACGAGTGAAGGTCTTCTTTCTAGCCCCCCCCAATTAAAGCATTTCCTTGGAAGGAATTGAGAAAATAATTAAGTTTTATATGGGTACCTCTTAAA
mRNA sequence
TAAAACCAAAATTAAGGAGACAAATAACAACTTCATTTCGTTTCATTCCAAATCCAATTCCCCTTTTACCCATCAATTGATTGATATTTATTCAATCAACTTCCCCCTCTGCGACTCGGCAATCCCAATCTGCGGCATCTTCCCCCTCTTCCCATTTCTCTCTCTGTTTTCTCTCGATCGTTCGCCCCTATTCGAGAGAGATCGGAAGCGGATTCGGGATGAGGGAAATCATCAGTCTTCACATTGGTCAAGCTGGGATTCAGGTCGGCAATTCTTGCTGGGAGCTTTACTGCCTCGAGCATGGCATCCAGCCTGATGGTTTGATGCCCAGTGACACCTCGGTTGGTGTAGCACACGATGCTTTCAACACATTTTTCAGCGAGACTGGTTCGGGCAAGCACGTTCCTAGAGCTATATTTGTGGATCTCGAACCAACTGTTATTGATGAAGTGAGGACTGGGACATATAGACAGCTTTTCCACCCGGAACAGCTCATATCTGGTAAAGAAGATGCTGCAAATAATTTTGCCCGAGGACATTATACAGTGGGTAGGGAAATAGTTGATCTGTGCCTTGACCGAGTTCGAAAACTAGCCGACAATTGTACTGGTTTGCAAGGGTTCTTAGTGTTTAATGCTGTTGGTGGTGGCACTGGATCTGGTTTGGGGTCGTTACTTCTGGAACGCTTGTCCGTGGATTATGGAAAGAAGTCAAAGCTTGGATTTTCCATATATCCTTCTCCACAGGTATCCACTGCCGTGGTCGAACCATACAACAGTGTGCTTTCCACTCATTCTCTGCTAGAACACACAGATGTCGCTGTGCTTCTGGACAACGAAGCCATTTATGATATCTGCAGGAGATCATTGGATATTGAAAGACCAACTTACACCAACTTGAACCGCTTGATATCCCAAGTTATCTCTTCTTTAACCACTTCCTTGAGGTTTGATGGTGCTATCAACGTGGATATAACCGAGTTTCAAACTAACCTTGTACCTTATCCACGTATTCATTTCATGCTCTCTTCTTATGCTCCTGTGATCTCTTCTGCAAAAGCTTACCATGAGCAGCTATCTGTTCCCGAAATCACCAATGCCGTATTTGATCCTTCAAGCATGATGGTCAAATGCGACCCAAGGCACGGAAAGTACATGGCATGCTGTTTGATGTATAGAGGAGATGTTGTACCCAAGGATGTGAATGCTGCTGTTGCTACCATCAAAACGAAGAGAACAGTTCAATTTGTTGACTGGTGTCCTACTGGCTTCAAATGTGGTATTAACTATCAACCCCCAAGTGTTGTTCCTGGGGGCGATCTTGCGAAGGTGCAGCGAGCTGTTTGTATGATAAGTAATAGCACAGCCGTGGCCGAGGTCTTTTCAAGAATCGATCACAAATTTGATCTGATGTATGCTAAGCGGGCATTCGTACATTGGTACGTGGGTGAGGGCATGGAGGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTTGCTGCTCTAGAAAAGGACTACGAGGAAGTTGGTGCGGAGGATGTGGATGAAGAGGAGGAAGGGGAAGATTATTAAACCAGGAGTGATAAATAGCTGGTGGTGTCCTTTTTCATCGTTTTCATGTTTCTTTGTTATCAAGTCCAAGCTGTGCAATGTTCCATACATGTTGACGAGTGGTTTCTGTTTTTATGATTGATTTCAAAATTTACAGTGTTAGAACTACTTGCAAATTTTTTATTACGAGTGAAGGTCTTCTTTCTAGCCCCCCCCAATTAAAGCATTTCCTTGGAAGGAATTGAGAAAATAATTAAGTTTTATATGGGTACCTCTTAAA
Coding sequence (CDS)
ATGAGGGAAATCATCAGTCTTCACATTGGTCAAGCTGGGATTCAGGTCGGCAATTCTTGCTGGGAGCTTTACTGCCTCGAGCATGGCATCCAGCCTGATGGTTTGATGCCCAGTGACACCTCGGTTGGTGTAGCACACGATGCTTTCAACACATTTTTCAGCGAGACTGGTTCGGGCAAGCACGTTCCTAGAGCTATATTTGTGGATCTCGAACCAACTGTTATTGATGAAGTGAGGACTGGGACATATAGACAGCTTTTCCACCCGGAACAGCTCATATCTGGTAAAGAAGATGCTGCAAATAATTTTGCCCGAGGACATTATACAGTGGGTAGGGAAATAGTTGATCTGTGCCTTGACCGAGTTCGAAAACTAGCCGACAATTGTACTGGTTTGCAAGGGTTCTTAGTGTTTAATGCTGTTGGTGGTGGCACTGGATCTGGTTTGGGGTCGTTACTTCTGGAACGCTTGTCCGTGGATTATGGAAAGAAGTCAAAGCTTGGATTTTCCATATATCCTTCTCCACAGGTATCCACTGCCGTGGTCGAACCATACAACAGTGTGCTTTCCACTCATTCTCTGCTAGAACACACAGATGTCGCTGTGCTTCTGGACAACGAAGCCATTTATGATATCTGCAGGAGATCATTGGATATTGAAAGACCAACTTACACCAACTTGAACCGCTTGATATCCCAAGTTATCTCTTCTTTAACCACTTCCTTGAGGTTTGATGGTGCTATCAACGTGGATATAACCGAGTTTCAAACTAACCTTGTACCTTATCCACGTATTCATTTCATGCTCTCTTCTTATGCTCCTGTGATCTCTTCTGCAAAAGCTTACCATGAGCAGCTATCTGTTCCCGAAATCACCAATGCCGTATTTGATCCTTCAAGCATGATGGTCAAATGCGACCCAAGGCACGGAAAGTACATGGCATGCTGTTTGATGTATAGAGGAGATGTTGTACCCAAGGATGTGAATGCTGCTGTTGCTACCATCAAAACGAAGAGAACAGTTCAATTTGTTGACTGGTGTCCTACTGGCTTCAAATGTGGTATTAACTATCAACCCCCAAGTGTTGTTCCTGGGGGCGATCTTGCGAAGGTGCAGCGAGCTGTTTGTATGATAAGTAATAGCACAGCCGTGGCCGAGGTCTTTTCAAGAATCGATCACAAATTTGATCTGATGTATGCTAAGCGGGCATTCGTACATTGGTACGTGGGTGAGGGCATGGAGGAAGGAGAATTTTCTGAAGCCCGTGAGGATCTTGCTGCTCTAGAAAAGGACTACGAGGAAGTTGGTGCGGAGGATGTGGATGAAGAGGAGGAAGGGGAAGATTATTAA
Protein sequence
MREIISLHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFSIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQLSVPEITNAVFDPSSMMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAEDVDEEEEGEDY
Homology
BLAST of CmaCh06G017590 vs. ExPASy Swiss-Prot
Match:
Q56WH1 (Tubulin alpha-3 chain OS=Arabidopsis thaliana OX=3702 GN=TUBA3 PE=1 SV=2)
HSP 1 Score: 881.3 bits (2276), Expect = 4.5e-255
Identity = 431/450 (95.78%), Postives = 445/450 (98.89%), Query Frame = 0
Query: 1 MREIISLHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAHDAFNTFFSETGSGK 60
MREIIS+HIGQAGIQVGNSCWELYCLEHGIQPDG+MPSDT+VGVAHDAFNTFFSETG+GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFSIYPSPQVSTA 180
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF+IYPSPQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQLSVPEITNAVFDPSS 300
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVIS+AKAYHEQLSVPEITNAVF+P+S
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300
Query: 301 MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM KCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+VVPGGDLAKVQRAVCMISN+TAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDYEEVGAE-DVDEEEEGEDY 450
AREDLAALEKDYEEVGAE DEE+EGEDY
Sbjct: 421 AREDLAALEKDYEEVGAEGGDDEEDEGEDY 450
BLAST of CmaCh06G017590 vs. ExPASy Swiss-Prot
Match:
B9DHQ0 (Tubulin alpha-5 chain OS=Arabidopsis thaliana OX=3702 GN=TUBA5 PE=1 SV=2)
HSP 1 Score: 881.3 bits (2276), Expect = 4.5e-255
Identity = 431/450 (95.78%), Postives = 445/450 (98.89%), Query Frame = 0
Query: 1 MREIISLHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAHDAFNTFFSETGSGK 60
MREIIS+HIGQAGIQVGNSCWELYCLEHGIQPDG+MPSDT+VGVAHDAFNTFFSETG+GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFSIYPSPQVSTA 180
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF+IYPSPQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQLSVPEITNAVFDPSS 300
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVIS+AKAYHEQLSVPEITNAVF+P+S
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300
Query: 301 MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM KCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+VVPGGDLAKVQRAVCMISN+TAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDYEEVGAE-DVDEEEEGEDY 450
AREDLAALEKDYEEVGAE DEE+EGEDY
Sbjct: 421 AREDLAALEKDYEEVGAEGGDDEEDEGEDY 450
BLAST of CmaCh06G017590 vs. ExPASy Swiss-Prot
Match:
O22349 (Tubulin alpha-3 chain OS=Eleusine indica OX=29674 GN=TUBA3 PE=2 SV=1)
HSP 1 Score: 880.6 bits (2274), Expect = 7.7e-255
Identity = 431/450 (95.78%), Postives = 444/450 (98.67%), Query Frame = 0
Query: 1 MREIISLHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAHDAFNTFFSETGSGK 60
MREIIS+HIGQAGIQVGN+CWELYCLEHGI+PDG MPSDTSVGVAHDAFNTFFSETGSGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTSVGVAHDAFNTFFSETGSGK 60
Query: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
HVPRAIFVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFSIYPSPQVSTA 180
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF+IYPSPQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQLSVPEITNAVFDPSS 300
SLRFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVIS+ KAYHEQLSVPEITNAVF+PSS
Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 301 MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
SVVPGGDLAKVQRAVCMISN+TAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDYEEVGAEDVDEE-EEGEDY 450
AREDLAALEKDYEEVGAE D+E +EGEDY
Sbjct: 421 AREDLAALEKDYEEVGAEGADDEGDEGEDY 450
BLAST of CmaCh06G017590 vs. ExPASy Swiss-Prot
Match:
P33627 (Tubulin alpha-6 chain OS=Zea mays OX=4577 GN=TUBA6 PE=2 SV=1)
HSP 1 Score: 879.4 bits (2271), Expect = 1.7e-254
Identity = 430/450 (95.56%), Postives = 444/450 (98.67%), Query Frame = 0
Query: 1 MREIISLHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAHDAFNTFFSETGSGK 60
MREIIS+HIGQAGIQVGN+CWELYCLEHGI+PDG MPSDTSVGVAHDAFNTFFSETGSGK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTSVGVAHDAFNTFFSETGSGK 60
Query: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
HVPRAIFVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFSIYPSPQVSTA 180
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF+IYPSPQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQLSVPEITNAVFDPSS 300
SLRFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVIS+ KAYHEQLSVPEITNAVF+PSS
Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 301 MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
SVVPGGDLAKVQRAVCMISN+TAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDYEEVGAEDVDEE-EEGEDY 450
AREDLAALEKDYEEVGAE D+E +EG+DY
Sbjct: 421 AREDLAALEKDYEEVGAEGADDEGDEGDDY 450
BLAST of CmaCh06G017590 vs. ExPASy Swiss-Prot
Match:
P28752 (Tubulin alpha-1 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBA1 PE=1 SV=1)
HSP 1 Score: 877.1 bits (2265), Expect = 8.6e-254
Identity = 428/450 (95.11%), Postives = 444/450 (98.67%), Query Frame = 0
Query: 1 MREIISLHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAHDAFNTFFSETGSGK 60
MREIIS+HIGQAGIQVGN+CWELYCLEHGI+PDG MPSDT+VGVAHDAFNTFFSETG+GK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
HVPRAIFVDLEPTVIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFSIYPSPQVSTA 180
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF+IYPSPQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQLSVPEITNAVFDPSS 300
SLRFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVIS+ KAYHEQLSVPEITNAVF+PSS
Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 301 MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
SVVPGGDLAKVQRAVCMISN+TAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDYEEVGAEDVDEE-EEGEDY 450
AREDLAALEKDYEEVGAE D+E ++GEDY
Sbjct: 421 AREDLAALEKDYEEVGAEGADDENDDGEDY 450
BLAST of CmaCh06G017590 vs. TAIR 10
Match:
AT5G19770.1 (tubulin alpha-3 )
HSP 1 Score: 881.3 bits (2276), Expect = 3.2e-256
Identity = 431/450 (95.78%), Postives = 445/450 (98.89%), Query Frame = 0
Query: 1 MREIISLHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAHDAFNTFFSETGSGK 60
MREIIS+HIGQAGIQVGNSCWELYCLEHGIQPDG+MPSDT+VGVAHDAFNTFFSETG+GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFSIYPSPQVSTA 180
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF+IYPSPQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQLSVPEITNAVFDPSS 300
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVIS+AKAYHEQLSVPEITNAVF+P+S
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300
Query: 301 MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM KCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+VVPGGDLAKVQRAVCMISN+TAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDYEEVGAE-DVDEEEEGEDY 450
AREDLAALEKDYEEVGAE DEE+EGEDY
Sbjct: 421 AREDLAALEKDYEEVGAEGGDDEEDEGEDY 450
BLAST of CmaCh06G017590 vs. TAIR 10
Match:
AT5G19780.1 (tubulin alpha-5 )
HSP 1 Score: 881.3 bits (2276), Expect = 3.2e-256
Identity = 431/450 (95.78%), Postives = 445/450 (98.89%), Query Frame = 0
Query: 1 MREIISLHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAHDAFNTFFSETGSGK 60
MREIIS+HIGQAGIQVGNSCWELYCLEHGIQPDG+MPSDT+VGVAHDAFNTFFSETG+GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFSIYPSPQVSTA 180
RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF+IYPSPQVSTA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQ+ISSLTT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQLSVPEITNAVFDPSS 300
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVIS+AKAYHEQLSVPEITNAVF+P+S
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQLSVPEITNAVFEPAS 300
Query: 301 MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM KCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+VVPGGDLAKVQRAVCMISN+TAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDYEEVGAE-DVDEEEEGEDY 450
AREDLAALEKDYEEVGAE DEE+EGEDY
Sbjct: 421 AREDLAALEKDYEEVGAEGGDDEEDEGEDY 450
BLAST of CmaCh06G017590 vs. TAIR 10
Match:
AT1G64740.1 (alpha-1 tubulin )
HSP 1 Score: 850.1 bits (2195), Expect = 8.0e-247
Identity = 412/450 (91.56%), Postives = 433/450 (96.22%), Query Frame = 0
Query: 1 MREIISLHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAHDAFNTFFSETGSGK 60
MREIIS+HIGQAGIQVGNSCWELYCLEHGIQPDG MPSD++VG HDAFNTFFSET SG+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
HVPRA+F+DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVD CL+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFSIYPSPQVSTA 180
R+RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD+GKKSKLGF+IYPSPQVSTA
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTA 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDV VLLDNEAIYDICRRSLDIERPTY+NLNRLISQ ISSLTT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTT 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQLSVPEITNAVFDPSS 300
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQ SVPEIT +VF+PS+
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQFSVPEITTSVFEPSN 300
Query: 301 MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM KCDPRHGKYMACCLMYRGDVVPKDVN AVA IK KRT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
SVVPGGDLAKVQRAVCMISN+TAVAEVFSRIDHKFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDYEEVGAEDV-DEEEEGEDY 450
AREDLAALEKDYEEVG E D++EEG++Y
Sbjct: 421 AREDLAALEKDYEEVGGEGAEDDDEEGDEY 450
BLAST of CmaCh06G017590 vs. TAIR 10
Match:
AT1G04820.1 (tubulin alpha-4 chain )
HSP 1 Score: 845.1 bits (2182), Expect = 2.6e-245
Identity = 407/450 (90.44%), Postives = 434/450 (96.44%), Query Frame = 0
Query: 1 MREIISLHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAHDAFNTFFSETGSGK 60
MRE IS+HIGQAGIQVGN+CWELYCLEHGIQPDG MPSD +VG DAFNTFFSETG+GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT+G+EIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFSIYPSPQVSTA 180
R+RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF++YPSPQVST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDV++LLDNEAIYDICRRSL IERPTYTNLNRL+SQVISSLT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTA 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQLSVPEITNAVFDPSS 300
SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVIS+ KA+HEQLSV EITN+ F+P+S
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPAS 300
Query: 301 MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM KCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+VVPGGDLAKVQRAVCMISNST+VAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDYEEVGAE-DVDEEEEGEDY 450
AREDLAALEKDYEEVGAE DE++EGE+Y
Sbjct: 421 AREDLAALEKDYEEVGAEGGDDEDDEGEEY 450
BLAST of CmaCh06G017590 vs. TAIR 10
Match:
AT1G50010.1 (tubulin alpha-2 chain )
HSP 1 Score: 845.1 bits (2182), Expect = 2.6e-245
Identity = 407/450 (90.44%), Postives = 434/450 (96.44%), Query Frame = 0
Query: 1 MREIISLHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTSVGVAHDAFNTFFSETGSGK 60
MRE IS+HIGQAGIQVGN+CWELYCLEHGIQPDG MPSD +VG DAFNTFFSETG+GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 61 HVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLD 120
HVPRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYT+G+EIVDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFSIYPSPQVSTA 180
R+RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGF++YPSPQVST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLLEHTDV++LLDNEAIYDICRRSL IERPTYTNLNRL+SQVISSLT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTA 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISSAKAYHEQLSVPEITNAVFDPSS 300
SLRFDGA+NVD+TEFQTNLVPYPRIHFMLSSYAPVIS+ KA+HEQLSV EITN+ F+P+S
Sbjct: 241 SLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFEPAS 300
Query: 301 MMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
MM KCDPRHGKYMACCLMYRGDVVPKDVNAAV TIKTKRT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 361 SVVPGGDLAKVQRAVCMISNSTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+VVPGGDLAKVQRAVCMISNST+VAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEKDYEEVGAE-DVDEEEEGEDY 450
AREDLAALEKDYEEVGAE DE++EGE+Y
Sbjct: 421 AREDLAALEKDYEEVGAEGGDDEDDEGEEY 450
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q56WH1 | 4.5e-255 | 95.78 | Tubulin alpha-3 chain OS=Arabidopsis thaliana OX=3702 GN=TUBA3 PE=1 SV=2 | [more] |
B9DHQ0 | 4.5e-255 | 95.78 | Tubulin alpha-5 chain OS=Arabidopsis thaliana OX=3702 GN=TUBA5 PE=1 SV=2 | [more] |
O22349 | 7.7e-255 | 95.78 | Tubulin alpha-3 chain OS=Eleusine indica OX=29674 GN=TUBA3 PE=2 SV=1 | [more] |
P33627 | 1.7e-254 | 95.56 | Tubulin alpha-6 chain OS=Zea mays OX=4577 GN=TUBA6 PE=2 SV=1 | [more] |
P28752 | 8.6e-254 | 95.11 | Tubulin alpha-1 chain OS=Oryza sativa subsp. japonica OX=39947 GN=TUBA1 PE=1 SV=... | [more] |