CmaCh06G010790 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh06G010790
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein BPS1, chloroplastic-like
LocationCma_Chr06: 7261160 .. 7265045 (-)
RNA-Seq ExpressionCmaCh06G010790
SyntenyCmaCh06G010790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGAAGCCTGTGATCTGTCTGTGAGTAACTTCGCAGTCATTTTAGCGCATTCCCCAACGGAACTAATACGGCAAGAGATTAAATTCTACATAACGGTCACGGACGGAAAAGAAAACGATCGGTGTAACGTCAACATCCAATCAATTCTCTCCACGTATCTTCTTTTCACACAATTTCCTTACCTCTTCGTTTAGGTTATCGTTGCCTTTATCTTCGAACTCTTATCCTTTTCCACGCGAATTCAACATCACCTGGCTGCGATAGTTTCTTGGAAATTTCCTTTGCCCGAATCTGGTAGGGGTCGCTCCATCTTTTTTTTTTTTTTCTTTTTGAATTATTATGTTTGGTTTAGATCTAAGTTTCGATGTGTAATCTAGGGCTTCATGCTGGCGATTTCTGGAGGGATTTTTTTTTTTCTTCTTTTCATACGCTTTGATTGTTCGTAGATCTACGAATTGGGATATATATATATATATTTAGCTTTAGTTTCTTGGATTCGCTCTAACTTTTGCTATTTCAAGCAGATACTTGGTTTTTTTTTGGGTGTAAAAATGGATTTCTGGAAGTTTTTGCTTATTAGAATGTTCTGAATGTTTTGCGTGTTCTACGTGGAGAATGATTTGTTTATGCGGTGCAATTTGTTGATATCAGGTGTAGCTTTTAATGAAATTTGTGTTGCTGAATTCAGGATTGGGAAAACCCTTTTTTGCTAGCGAAAATTTGAATAGGTTTTTGGAATAAATTTCATATTTGGGCTTTTTGTGTCGTTTTTTTTTTTTTTTTTTTTGACGTTTTCATTCTGTAGGACGAGAATTTAACATTCTATGGTTAAAATTAGCTATTGGGGTTGTTTGCAAGCGGGCCTCTTGGCTGTGTTTAGTGATGTTAGTTGTTGCTTTATCCAGTTGGTTCATCAGGGTCTTACTTCTGCCTTAGATTGGCTTAATTGATCATGCTATCCCTGGAAATTCCATTAAAGGCTTGGTTCTCCTGCACCAATTGTATCCGAAACTCTATTACTTGATGATTCTGTGTGATTGTGGCATGATGATGGTTATCTTGAATTTTTTTCCAAATGGAAGCTCATCCTTGGATTTTATACATCTTGTAGTTAGTGTTATACAATGAGCCGATCACAAGAGCCGCCCCACCGGCTATTCTTTCCTTTCGGGAATCCTTTCCGTGCAAGAACACCCAAGGGTTCAAAATTGTCTTCCAAACTTGTTTTTCTGCTAGCCACTTTTGAGGATTCCTTGGCAGAGGGGCTGAGAAAGCTCACTTCAAAATCAGAAAATGACATACTTAGCTTCTCATGGATGGCATTAGCAATGAAGCTGCTTTGCGAAACTCACGTAGATGTAAAAACACTTATAGAAGAGCTTGAGCTCCCTGTGTCTGACTGGGATGAGAAATGGCTAGATGAGTACCTGGACATCAGTGTGAAATTACTTGATATATGCAATGATTTTAGCTCTGAGCTCTCACAGTTGAATCAGGGTCATCTGGTACTCCGGTGTGCCTTGCACAATCTGGCGTCTACATCTTTGAACCAGTTAGTTCATGCTTGTTCTTCGTTGGATGGATGGAATCAACATATTAGTAACAGAACCTCCAGAGTTAAGAGCCATTCTCCTATTTTGGACCGTCTTAAGGGATCGCTTGATCTTCCGAAAGTTCAGAAGAACTCAGCTAAAGGCAAGGTTTTGATGCATGTAATGTATGGAGTGAAGGTGGTGACTCTGTTTATTTGCAGTGTTTTAGCTTCTGCTTTTGCGGGTTCGTCCGTAAGTTTGTTATCCATCAATATTCCGGATACATATAGATGGGCTCAAGCTTTTACTGAATTACAGAAAAATGTAAATTCCAGTGGAAGTTTTACTGTATTGAGAGAGCGTGATGCAATGGATGAGAGTGTTAAAAAATTGCATTCCATGATTCAAGGAAATGTGGATGGCGGCATGAAAGTAGAAGAATTCCAGAATCTGGTTGTAGATTTGGGGAGGGAGGCAGAAAAGCTTACACAAAGTGTTGATCATCTTACTAAACAAGTGGATGAGTTTTTTCACGTTGTTTTATCTGGACGAGATGCATTGCTTTCAAATCTTAGAGAAAGTGAGACGGTACTTGATCAGGGATCGGGGGAGCTGCGTACAAGGCATCTGTGACGGAGTTCGAGCTTGTTCCTTTATATAAAAGGGTTAAACTGGTTATTTTCTTATCTTTTAATTTGCTAATGTACAATATCTTGCTTGCTTTTCATAGTATAGCCTGTGCAGTAATGCGTTATGTTATTGTACTGTTACCGTGGTTTGATCGTGTAACGTTGTTCTGTGGAATGAGAATGAAATGGAAAAGTATATCGAGTTTAAGTAAAAGACCTTTCGTACTGCATTAACTTCATTACTAATTCTTTCTGCTCAGTTTCTACCTTGTTAATATCATATGCTGAAATGATGAATCCATAAGTAAATTTATGTATTTTGTAAGTGTTTCTGTATTGAATTGTTTTTGATATGTGGATACTATGTTGTATGGGCTGTATGGAGTTGGAATAGGAGCTTACCTAAATCTTCTTGTAGTTCTTTGGCACACGATACTATTTAACCTCTGTAAAAGCTTGCTTTCTGAACAATGTAGTGAAGATGTTGATGATATCACATACTATTTTTGCAGCTGTTGGATTATGATCTCATGTCTCTTGATCTTTGTTAACTGATGTAGTGACAGAAGGAAAAACGATCAGAAGGTTTTCCTGCAGTGCAGAAATCTAGAACGCCAGCCCTTTCGGTGAACATTTGCGAGTTTGGCTGTAACAGCCCAAGCCTACCGCCAATAGATATTGTCCTCTTTGGGCTTTCCCTCAAGGTTTTTAAAATGCCTCTACTATGGAGAGGGTCTATCCTACTATGACCAGTGTCTCACACCGTTTGATGACTGCTCTGATACCATTTGTAATAGCCCAAGCCCACCGCTAGCAAGTATTTAAAATGCATTTACTATGAAGAGGGTCTAGCCCTATTCCGACCAGTGCCGGACTCTGATACCATTTGTAACAGCTCAAGCCCACTGCTATCTGATATTGTCTTTGGGCATTCCAGGGCTTTCTTTAAAGGTTTTAAAACGCATTTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTCCTATCCAACCGATGTGAGATCTTACAGTACAAATTGGCACTAGGTTTGGGAATTGTACTTATTGGTTGCATTGTTCTCGTACCTTCAGTTTTTCTTTTATTTTCACTATTCTTAGTCTTTGGAAAATAACTTCCTCGACTTGTTGGTCTAAAAGGAGAACCAGTTCGATACATGTCAATTATGATGGCATTTAATGGGGGTGTACATTCTACTGTATAAAGGAGAACCAGTTCGATACATGTCAATTATGATGGCATTTAATGGGGGTGTACATTCTACTGTATTAATTTGAACTGTGCTGGAAAGCTGAAATACACAACATACTGAATACTTTTAGATAGATTTTAATTCTTACAGTAACAATATACTGACTTGAATATAGCTTTTGTTGTTCACAGCAAGAAATCTTCAAGCATGACTGAGTTGATATGAGCATTTTTTCAACTCCACTGCATCAATTGGTATATTTTCCTCTGGAAATCTGCATGTTGTAAACTTCTCGGCCCCCTGATCAGGTAACAGACTGCACGGTGGAGGTGTAACATTGCTCGTAGTTCCCTCCACATCAGTGCAAGTCCATGGCTGTTTCTTGGCCTTTGCTGCCAAGCTGATTGTCACATTGGAAATGCAGATACCTGTAAATGTGTCACCTGAAATTCCCTCCAATCTTGCTGCCATTGTGGCGTTTTCAACGACCATGTCCCTGTAG

mRNA sequence

ATGCCAGAAGCCTGTGATCTGTCTGTGAGTAACTTCGCAGTCATTTTAGCGCATTCCCCAACGGAACTAATACGGCAAGAGATTAAATTCTACATAACGGTCACGGACGGAAAAGAAAACGATCGGTGTAACGTCAACATCCAATCAATTCTCTCCACCTATTGGGGTTGTTTGCAAGCGGGCCTCTTGGCTGTGTTTAGTGATTGTTATACAATGAGCCGATCACAAGAGCCGCCCCACCGGCTATTCTTTCCTTTCGGGAATCCTTTCCGTGCAAGAACACCCAAGGGTTCAAAATTGTCTTCCAAACTTGTTTTTCTGCTAGCCACTTTTGAGGATTCCTTGGCAGAGGGGCTGAGAAAGCTCACTTCAAAATCAGAAAATGACATACTTAGCTTCTCATGGATGGCATTAGCAATGAAGCTGCTTTGCGAAACTCACGTAGATGTAAAAACACTTATAGAAGAGCTTGAGCTCCCTGTGTCTGACTGGGATGAGAAATGGCTAGATGAGTACCTGGACATCAGTGTGAAATTACTTGATATATGCAATGATTTTAGCTCTGAGCTCTCACAGTTGAATCAGGGTCATCTGGTACTCCGGTGTGCCTTGCACAATCTGGCGTCTACATCTTTGAACCAGTTAGTTCATGCTTGTTCTTCGTTGGATGGATGGAATCAACATATTAGTAACAGAACCTCCAGAGTTAAGAGCCATTCTCCTATTTTGGACCGTCTTAAGGGATCGCTTGATCTTCCGAAAGTTCAGAAGAACTCAGCTAAAGGCAAGGTTTTGATGCATGTAATGTATGGAGTGAAGGTGGTGACTCTGTTTATTTGCAGTGTTTTAGCTTCTGCTTTTGCGGGTTCGTCCGTAAGTTTGTTATCCATCAATATTCCGGATACATATAGATGGGCTCAAGCTTTTACTGAATTACAGAAAAATGTAAATTCCAGTGGAAGTTTTACTGTATTGAGAGAGCGTGATGCAATGGATGAGAGTGTTAAAAAATTGCATTCCATGATTCAAGGAAATGTGGATGGCGGCATGAAAGTAGAAGAATTCCAGAATCTGGTTGTAGATTTGGGGAGGGAGGCAGAAAAGCTTACACAAAGTGTTGATCATCTTACTAAACAAGTGGATGAGTTTTTTCACGTTGTTTTATCTGGACGAGATGCATTGCTTTCAAATCTTAGAGAAAGTGAGACGATACCTGTAAATGTGTCACCTGAAATTCCCTCCAATCTTGCTGCCATTGTGGCGTTTTCAACGACCATGTCCCTGTAG

Coding sequence (CDS)

ATGCCAGAAGCCTGTGATCTGTCTGTGAGTAACTTCGCAGTCATTTTAGCGCATTCCCCAACGGAACTAATACGGCAAGAGATTAAATTCTACATAACGGTCACGGACGGAAAAGAAAACGATCGGTGTAACGTCAACATCCAATCAATTCTCTCCACCTATTGGGGTTGTTTGCAAGCGGGCCTCTTGGCTGTGTTTAGTGATTGTTATACAATGAGCCGATCACAAGAGCCGCCCCACCGGCTATTCTTTCCTTTCGGGAATCCTTTCCGTGCAAGAACACCCAAGGGTTCAAAATTGTCTTCCAAACTTGTTTTTCTGCTAGCCACTTTTGAGGATTCCTTGGCAGAGGGGCTGAGAAAGCTCACTTCAAAATCAGAAAATGACATACTTAGCTTCTCATGGATGGCATTAGCAATGAAGCTGCTTTGCGAAACTCACGTAGATGTAAAAACACTTATAGAAGAGCTTGAGCTCCCTGTGTCTGACTGGGATGAGAAATGGCTAGATGAGTACCTGGACATCAGTGTGAAATTACTTGATATATGCAATGATTTTAGCTCTGAGCTCTCACAGTTGAATCAGGGTCATCTGGTACTCCGGTGTGCCTTGCACAATCTGGCGTCTACATCTTTGAACCAGTTAGTTCATGCTTGTTCTTCGTTGGATGGATGGAATCAACATATTAGTAACAGAACCTCCAGAGTTAAGAGCCATTCTCCTATTTTGGACCGTCTTAAGGGATCGCTTGATCTTCCGAAAGTTCAGAAGAACTCAGCTAAAGGCAAGGTTTTGATGCATGTAATGTATGGAGTGAAGGTGGTGACTCTGTTTATTTGCAGTGTTTTAGCTTCTGCTTTTGCGGGTTCGTCCGTAAGTTTGTTATCCATCAATATTCCGGATACATATAGATGGGCTCAAGCTTTTACTGAATTACAGAAAAATGTAAATTCCAGTGGAAGTTTTACTGTATTGAGAGAGCGTGATGCAATGGATGAGAGTGTTAAAAAATTGCATTCCATGATTCAAGGAAATGTGGATGGCGGCATGAAAGTAGAAGAATTCCAGAATCTGGTTGTAGATTTGGGGAGGGAGGCAGAAAAGCTTACACAAAGTGTTGATCATCTTACTAAACAAGTGGATGAGTTTTTTCACGTTGTTTTATCTGGACGAGATGCATTGCTTTCAAATCTTAGAGAAAGTGAGACGATACCTGTAAATGTGTCACCTGAAATTCCCTCCAATCTTGCTGCCATTGTGGCGTTTTCAACGACCATGTCCCTGTAG

Protein sequence

MPEACDLSVSNFAVILAHSPTELIRQEIKFYITVTDGKENDRCNVNIQSILSTYWGCLQAGLLAVFSDCYTMSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLRKLTSKSENDILSFSWMALAMKLLCETHVDVKTLIEELELPVSDWDEKWLDEYLDISVKLLDICNDFSSELSQLNQGHLVLRCALHNLASTSLNQLVHACSSLDGWNQHISNRTSRVKSHSPILDRLKGSLDLPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFAGSSVSLLSINIPDTYRWAQAFTELQKNVNSSGSFTVLRERDAMDESVKKLHSMIQGNVDGGMKVEEFQNLVVDLGREAEKLTQSVDHLTKQVDEFFHVVLSGRDALLSNLRESETIPVNVSPEIPSNLAAIVAFSTTMSL
Homology
BLAST of CmaCh06G010790 vs. ExPASy Swiss-Prot
Match: Q9LMM6 (Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 7.5e-82
Identity = 171/335 (51.04%), Postives = 229/335 (68.36%), Query Frame = 0

Query: 72  MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLRKLTSKSENDIL 131
           M+R Q+PP R FFPFGNPF+  + K S LSSKL+ LL  FE +LA  + KL  K ++DIL
Sbjct: 1   MARPQDPP-RGFFPFGNPFKNLSSKNSVLSSKLLPLLNNFETNLASSISKLVPKEKSDIL 60

Query: 132 SFSWMALAMKLLCETHVDVKTLIEELELPVSDWDEKWLDEYLDISVKLLDICNDFSSELS 191
           + SWM  AM+ LCETH  +KTLI +LELPVSDW++KW+D YLDISVKLLD+CN FSSEL+
Sbjct: 61  TVSWMKQAMESLCETHNGIKTLITDLELPVSDWEDKWVDVYLDISVKLLDLCNAFSSELT 120

Query: 192 QLNQGHLVLRCALHNLASTSLNQLVHACSSLDGWNQHISNRTSRVKSHSPILDRLKGSLD 251
           +LNQGHL+L+ ALHNL + S   L  A SSLD W QHI ++  R+++   IL  L  +L+
Sbjct: 121 RLNQGHLLLQFALHNLEANSPQNLSKAQSSLDSWKQHIVSKNPRIENCRAILSSLVQTLN 180

Query: 252 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFAGSSVSLLSINIPDTYRWAQAFTE 311
           LPKV KNSAKGKVLM  +YGVKV TL+I  V A+AF+GSS +L+ + + +   WAQ+F E
Sbjct: 181 LPKV-KNSAKGKVLMRALYGVKVKTLYISGVFAAAFSGSSQNLMYLTVSNELPWAQSFME 240

Query: 312 LQ-------KNVNSSGSFTVLRERDAMDESVKKLHSMIQGNVDGGMKVEEFQNLVVDLGR 371
           +Q       KN+  S   TVL+E +A+   VKKL+  IQ      + ++  ++ V +   
Sbjct: 241 VQNTMNAEIKNIFLSDGLTVLKELEAVASGVKKLYPAIQQGSIDPISLQPLKDSVTE--- 300

Query: 372 EAEKLTQSVDHLTKQVDEFFHVVLSGRDALLSNLR 400
               L+  +D ++K+VD FF ++LSGRD LL NLR
Sbjct: 301 ----LSNGIDLVSKEVDCFFKILLSGRDTLLENLR 326

BLAST of CmaCh06G010790 vs. ExPASy Swiss-Prot
Match: Q337C0 (UPF0496 protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0513300 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.2e-59
Identity = 137/320 (42.81%), Postives = 192/320 (60.00%), Query Frame = 0

Query: 72  MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLRKLTSKSENDIL 131
           MSR+   P R FFP GNPFR   P G+ LS KL  LLA++ED+LA  LRKL  ++ +D+L
Sbjct: 1   MSRAHGSP-RSFFPVGNPFRVMFPGGAHLSRKLQELLASYEDALALSLRKLKPEAASDVL 60

Query: 132 SFSWMALAMKLLCETHVDVKTLIEELELPVSDWDEKWLDEYLDISVKLLDICNDFSSELS 191
           + SWM LA+  L E H ++  LI +LELPVSDWD+KW+D YL+ SVKLLDIC   SSELS
Sbjct: 61  TLSWMRLAVDCLSELHTNIANLITDLELPVSDWDDKWVDIYLNSSVKLLDICIALSSELS 120

Query: 192 QLNQGHLVLRCALHNLAS----TSLNQLVHACSSLDGWNQHISNRTSRVKSHSPILDRLK 251
           +L+QG L+L+ ALH L S     S  QL  A  SL  W + +  R +R+ S S  L  L 
Sbjct: 121 RLDQGQLLLQYALHVLGSESGVPSQEQLKRAEPSLREWMELVGVRCARLVSCSATLQELA 180

Query: 252 GSLDLPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFAGSSVSLLSINIPDTYRWAQ 311
           G+L L KV KNSAKGKVLM  +YG++ VT+F+CS+  +  +GS   L+ +++P+ + W+Q
Sbjct: 181 GNLSLMKV-KNSAKGKVLMRALYGIESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQ 240

Query: 312 AFTELQKNVN-------SSGSFTVLRERDAMDESVKKLHSMIQGNVDGGMKVEEFQNLVV 371
           AF +L   V+       S GS   ++E + ++   ++LH +   +               
Sbjct: 241 AFNDLHTAVSEELTRQLSGGSVAAVKELEEVEACARRLHVLASTS--------------- 300

Query: 372 DLGREAEKLTQSVDHLTKQV 381
            L  EA  L  +V H  ++V
Sbjct: 301 QLEEEAANLANAVSHTEEEV 303

BLAST of CmaCh06G010790 vs. ExPASy Swiss-Prot
Match: A2Z9A6 (UPF0496 protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_033149 PE=3 SV=2)

HSP 1 Score: 227.6 bits (579), Expect = 2.6e-58
Identity = 136/320 (42.50%), Postives = 190/320 (59.38%), Query Frame = 0

Query: 72  MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLRKLTSKSENDIL 131
           MSR+   P R FFP GNPFR   P G+ LS KL  LLA++ED+LA  LRKL  ++ +D+L
Sbjct: 1   MSRAHGSP-RSFFPVGNPFRVMFPGGAHLSRKLQELLASYEDALALSLRKLKPEAASDVL 60

Query: 132 SFSWMALAMKLLCETHVDVKTLIEELELPVSDWDEKWLDEYLDISVKLLDICNDFSSELS 191
           + SWM LA+  L E H ++  LI +LELPVSDWD+KW+D YL+ SVKLLDIC   SSELS
Sbjct: 61  TLSWMRLAVDCLSELHTNIANLITDLELPVSDWDDKWVDIYLNSSVKLLDICIALSSELS 120

Query: 192 QLNQGHLVLRCALHNLAS----TSLNQLVHACSSLDGWNQHISNRTSRVKSHSPILDRLK 251
           +L+QG L+L+ ALH L S     S  QL  A  SL  W + +  R  R+ S S  L  L 
Sbjct: 121 RLDQGQLLLQYALHVLGSESGVPSQEQLKRAEPSLREWMELVGVRCPRLVSCSATLQELA 180

Query: 252 GSLDLPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFAGSSVSLLSINIPDTYRWAQ 311
           G+L L KV KNS KGKVLM  +YG++ VT+F+CS+  +  +GS   L+ +++P+ + W+Q
Sbjct: 181 GNLSLMKV-KNSVKGKVLMRALYGIESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQ 240

Query: 312 AFTELQKNVN-------SSGSFTVLRERDAMDESVKKLHSMIQGNVDGGMKVEEFQNLVV 371
           AF +L   V+       + GS   ++E + ++   K+LH +   +               
Sbjct: 241 AFNDLHTAVSEELTRQLAGGSVAAVKELEEVEACAKRLHVLASTS--------------- 300

Query: 372 DLGREAEKLTQSVDHLTKQV 381
            L  EA  L  +V H  ++V
Sbjct: 301 QLEEEAANLANAVSHTEEEV 303

BLAST of CmaCh06G010790 vs. TAIR 10
Match: AT2G46080.1 (CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 330.9 bits (847), Expect = 1.5e-90
Identity = 181/347 (52.16%), Postives = 243/347 (70.03%), Query Frame = 0

Query: 72  MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLRKLTSKSENDIL 131
           MSR Q+PP R FFPFGNPFR  + KGS LS  L+ LL  FE  L E L+KL  K+++DIL
Sbjct: 1   MSRPQDPP-RGFFPFGNPFRMLSSKGSDLSPWLLSLLNGFELRLEERLKKLMPKNKDDIL 60

Query: 132 SFSWMALAMKLLCETHVDVKTLIEELELPVSDWDEKWLDEYLDISVKLLDICNDFSSELS 191
           + SWM LAM+ LCETH ++ TLI +L+LPVSDW+EKW+D YL+ISV+LLD+CN FSSEL+
Sbjct: 61  TLSWMKLAMESLCETHKNINTLITDLQLPVSDWEEKWVDVYLNISVRLLDLCNAFSSELT 120

Query: 192 QLNQGHLVLRCALHNLASTSLNQLVHACSSLDGWNQHISNRTSRVKSHSPILDRLKGSLD 251
           +LNQG L L+C LHNL S S  + + A SSLD W QH++    R+++   +LD L  SL 
Sbjct: 121 RLNQGDLFLKCVLHNLQSDSGEKYLQARSSLDSWRQHVNTNNPRIENCRAVLDSLVKSLS 180

Query: 252 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFAGSSVSLLSINIPDTYRWAQAFTE 311
           LPKV KNS KGKVLM   YGVKV T++ICSV  +A++ S+  L  + + +   WA+ FT+
Sbjct: 181 LPKV-KNSPKGKVLMRAFYGVKVQTVYICSVFTAAWSDSTKDLFDLPVSEKPLWAKVFTD 240

Query: 312 LQKNVN-------SSGSFTVLRERDAMDESVKKLHSMIQGNVDGGMKVEEFQNLVVDLGR 371
           +Q  VN       SSG  T+L+E +++D SV+KL+ MIQ  VD  ++VE F++ V++LG 
Sbjct: 241 MQSVVNAEIRDMLSSGRTTILKELESVDASVEKLYPMIQDGVD-PVEVEFFKDNVMELGT 300

Query: 372 EAEKLTQSVDHLTKQVDEFFHVVLSGRDALLSNLRESETIPVNVSPE 412
           +AEKL+Q +D L ++VD FF + L GRD LL NLR S++I  N   E
Sbjct: 301 QAEKLSQGLDQLLEEVDSFFKLTLRGRDVLLCNLRSSDSISGNAVGE 344

BLAST of CmaCh06G010790 vs. TAIR 10
Match: AT1G01550.1 (Protein of unknown function (DUF793) )

HSP 1 Score: 305.8 bits (782), Expect = 5.3e-83
Identity = 171/335 (51.04%), Postives = 229/335 (68.36%), Query Frame = 0

Query: 72  MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLRKLTSKSENDIL 131
           M+R Q+PP R FFPFGNPF+  + K S LSSKL+ LL  FE +LA  + KL  K ++DIL
Sbjct: 1   MARPQDPP-RGFFPFGNPFKNLSSKNSVLSSKLLPLLNNFETNLASSISKLVPKEKSDIL 60

Query: 132 SFSWMALAMKLLCETHVDVKTLIEELELPVSDWDEKWLDEYLDISVKLLDICNDFSSELS 191
           + SWM  AM+ LCETH  +KTLI +LELPVSDW++KW+D YLDISVKLLD+CN FSSEL+
Sbjct: 61  TVSWMKQAMESLCETHNGIKTLITDLELPVSDWEDKWVDVYLDISVKLLDLCNAFSSELT 120

Query: 192 QLNQGHLVLRCALHNLASTSLNQLVHACSSLDGWNQHISNRTSRVKSHSPILDRLKGSLD 251
           +LNQGHL+L+ ALHNL + S   L  A SSLD W QHI ++  R+++   IL  L  +L+
Sbjct: 121 RLNQGHLLLQFALHNLEANSPQNLSKAQSSLDSWKQHIVSKNPRIENCRAILSSLVQTLN 180

Query: 252 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFAGSSVSLLSINIPDTYRWAQAFTE 311
           LPKV KNSAKGKVLM  +YGVKV TL+I  V A+AF+GSS +L+ + + +   WAQ+F E
Sbjct: 181 LPKV-KNSAKGKVLMRALYGVKVKTLYISGVFAAAFSGSSQNLMYLTVSNELPWAQSFME 240

Query: 312 LQ-------KNVNSSGSFTVLRERDAMDESVKKLHSMIQGNVDGGMKVEEFQNLVVDLGR 371
           +Q       KN+  S   TVL+E +A+   VKKL+  IQ      + ++  ++ V +   
Sbjct: 241 VQNTMNAEIKNIFLSDGLTVLKELEAVASGVKKLYPAIQQGSIDPISLQPLKDSVTE--- 300

Query: 372 EAEKLTQSVDHLTKQVDEFFHVVLSGRDALLSNLR 400
               L+  +D ++K+VD FF ++LSGRD LL NLR
Sbjct: 301 ----LSNGIDLVSKEVDCFFKILLSGRDTLLENLR 326

BLAST of CmaCh06G010790 vs. TAIR 10
Match: AT1G01550.2 (Protein of unknown function (DUF793) )

HSP 1 Score: 305.8 bits (782), Expect = 5.3e-83
Identity = 171/335 (51.04%), Postives = 229/335 (68.36%), Query Frame = 0

Query: 72  MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLRKLTSKSENDIL 131
           M+R Q+PP R FFPFGNPF+  + K S LSSKL+ LL  FE +LA  + KL  K ++DIL
Sbjct: 1   MARPQDPP-RGFFPFGNPFKNLSSKNSVLSSKLLPLLNNFETNLASSISKLVPKEKSDIL 60

Query: 132 SFSWMALAMKLLCETHVDVKTLIEELELPVSDWDEKWLDEYLDISVKLLDICNDFSSELS 191
           + SWM  AM+ LCETH  +KTLI +LELPVSDW++KW+D YLDISVKLLD+CN FSSEL+
Sbjct: 61  TVSWMKQAMESLCETHNGIKTLITDLELPVSDWEDKWVDVYLDISVKLLDLCNAFSSELT 120

Query: 192 QLNQGHLVLRCALHNLASTSLNQLVHACSSLDGWNQHISNRTSRVKSHSPILDRLKGSLD 251
           +LNQGHL+L+ ALHNL + S   L  A SSLD W QHI ++  R+++   IL  L  +L+
Sbjct: 121 RLNQGHLLLQFALHNLEANSPQNLSKAQSSLDSWKQHIVSKNPRIENCRAILSSLVQTLN 180

Query: 252 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFAGSSVSLLSINIPDTYRWAQAFTE 311
           LPKV KNSAKGKVLM  +YGVKV TL+I  V A+AF+GSS +L+ + + +   WAQ+F E
Sbjct: 181 LPKV-KNSAKGKVLMRALYGVKVKTLYISGVFAAAFSGSSQNLMYLTVSNELPWAQSFME 240

Query: 312 LQ-------KNVNSSGSFTVLRERDAMDESVKKLHSMIQGNVDGGMKVEEFQNLVVDLGR 371
           +Q       KN+  S   TVL+E +A+   VKKL+  IQ      + ++  ++ V +   
Sbjct: 241 VQNTMNAEIKNIFLSDGLTVLKELEAVASGVKKLYPAIQQGSIDPISLQPLKDSVTE--- 300

Query: 372 EAEKLTQSVDHLTKQVDEFFHVVLSGRDALLSNLR 400
               L+  +D ++K+VD FF ++LSGRD LL NLR
Sbjct: 301 ----LSNGIDLVSKEVDCFFKILLSGRDTLLENLR 326

BLAST of CmaCh06G010790 vs. TAIR 10
Match: AT4G01360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 99 Blast hits to 99 proteins in 25 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 192.2 bits (487), Expect = 8.6e-49
Identity = 123/329 (37.39%), Postives = 192/329 (58.36%), Query Frame = 0

Query: 88  NPFRARTPK--GSKLSSKLVFLLATFEDSLAEGLRKLTSKSENDILSFSWMALAMKLLCE 147
           NPF+    K   ++LS KL+ LL  FE +L   +R+L  K +NDI+S SWM  AM+ LCE
Sbjct: 10  NPFKILFTKKNNARLSPKLLSLLNNFETNLTVSIRELVPKDKNDIVSVSWMIQAMQSLCE 69

Query: 148 THVDVKTLIEELELPVSDWDEKWLDEYLDISVKLLDICNDFSSELSQLNQGHLVLRCALH 207
           TH  ++TL+++LE+PVSD +E ++  + D S+K  ++CN F+SE+  L  G+L+L+ A  
Sbjct: 70  THKSIRTLVKDLEVPVSDLEENFIYIFSDFSLK-RELCNAFTSEIYHLEHGNLLLKFAFS 129

Query: 208 NLASTSLNQLVHACSSLDGWNQHISNRTSRVKSHSPILDRLKGSLD------LPKVQKNS 267
            L + S N        L  WNQH+ ++   +++   +L RL  S+D          +K S
Sbjct: 130 KLETNSGN-------ILQRWNQHMVSKNPSIENWGAVLSRLVESMDHHHHISKKGKKKYS 189

Query: 268 AKGKVLMHVMYGVKVVTLFICSVLASAFAGSSVSLLSINIP---DTYRWAQAFTELQKNV 327
           A+GKVL+ V+YGVKV TL+I SV  ++F+GSS +L  + IP   +   W QAF ELQ  +
Sbjct: 190 AEGKVLLRVLYGVKVKTLYIFSVFDASFSGSSKNLFYLTIPKEMEELPWVQAFMELQNTI 249

Query: 328 NS-------SGSFTVLRERDAMDESVKKLHSMIQGNVDGGMKVEEFQNLVVDLGREAEKL 387
           N        S  FTV+++ +A++  VKKL++ +Q      + VE  +  V++L    E +
Sbjct: 250 NPEIKNTFLSDGFTVIKDLEAVETGVKKLYTAVQEGSVPILLVEPLEKSVIELSERFELV 309

Query: 388 TQSVDHLTKQVDEFFHVVLSGRDALLSNL 399
           ++    L+K       +V+S RDALL +L
Sbjct: 310 SKETRCLSK-------MVISARDALLESL 323

BLAST of CmaCh06G010790 vs. TAIR 10
Match: AT3G61500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46080.1); Has 90 Blast hits to 90 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 98.6 bits (244), Expect = 1.3e-20
Identity = 59/157 (37.58%), Postives = 87/157 (55.41%), Query Frame = 0

Query: 100 LSSKLVFLLATFEDSLAEGLRKLTSKSENDILSFSWMALAMKLLCETHVDVKTLIEELEL 159
           L  K   LL  FE SL E L+KL  ++ ++IL+  WM LAM+LL +TH D+  LI +L+L
Sbjct: 22  LFPKKNLLLNNFESSLTERLKKLIPQNTDEILTLPWMILAMELLYDTHNDINILITDLKL 81

Query: 160 PVSDWDEK--WLDEYLDISVKLLDICNDFSSELSQLNQGHLVLRCALHNLASTSLNQLVH 219
                 E   W + Y++I+ KLLD+CN F S L  +N G + L+   H L   S +    
Sbjct: 82  HYMTDSEHGYWFENYMNINTKLLDLCNAFMSLLRHMNHGIVCLKFLRHKLEMKSEDLCTE 141

Query: 220 ACSSLDGWNQHISNRTSRVKSHSPILDRLKGSLDLPK 255
            CS+LD W ++I+   S+ +    +L R   SL+  K
Sbjct: 142 ICSALDSWRENITAEISKCRE---VLGRYVESLNFHK 175

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LMM67.5e-8251.04Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1[more]
Q337C05.2e-5942.81UPF0496 protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0513300 PE=2 ... [more]
A2Z9A62.6e-5842.50UPF0496 protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_033149 PE=3 SV=2[more]
Match NameE-valueIdentityDescription
AT2G46080.11.5e-9052.16CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Ar... [more]
AT1G01550.15.3e-8351.04Protein of unknown function (DUF793) [more]
AT1G01550.25.3e-8351.04Protein of unknown function (DUF793) [more]
AT4G01360.18.6e-4937.39unknown protein; BEST Arabidopsis thaliana protein match is: Protein of unknown ... [more]
AT3G61500.11.3e-2037.58unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 352..379
NoneNo IPR availablePANTHERPTHR31509:SF3BPS1-LIKE PROTEINcoord: 77..404
NoneNo IPR availablePANTHERPTHR31509BPS1-LIKE PROTEINcoord: 77..404
IPR004320Protein of unknown function DUF241, plantPFAMPF03087DUF241coord: 165..395
e-value: 1.7E-8
score: 34.6

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G010790.1CmaCh06G010790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane