Homology
BLAST of CmaCh06G008570 vs. ExPASy Swiss-Prot
Match:
P30181 (DNA topoisomerase 1 alpha OS=Arabidopsis thaliana OX=3702 GN=TOP1A PE=1 SV=1)
HSP 1 Score: 1015.4 bits (2624), Expect = 4.0e-295
Identity = 575/939 (61.24%), Postives = 678/939 (72.20%), Query Frame = 0
Query: 1 MAVETFGKAPTFDE---DDEDNMPIVFKRSS--ASRQNQLDSEAKQR----LNKLSGRQG 60
M ET K P D D +D+ P+ FKR++ AS NQ S +++ K+S +
Sbjct: 1 MGTETVSK-PVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPMR- 60
Query: 61 SDVCSANGQTSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTD 120
S V S NG TT KTS +KSS +SS +AS KSP S D
Sbjct: 61 SPVTSPNG--------TTPSNKTSIVKSSM------PSSSSKASPAKSPLRNDMPSTVKD 120
Query: 121 SQSRHLVKAAVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNK----- 180
++ K E++ DSEDD+PLS L G P V + K
Sbjct: 121 RSQLQKDQSECKIEHE--------DSEDDRPLSSILSGNKGPTSSRQVSSPQPEKKNNGD 180
Query: 181 --VEKSSA----DSDDEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDK 240
++++S +SDDE P+SS F K S +SGGNQ DEKKPL+ K+HQNG ++
Sbjct: 181 RPLDRASRIIKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTVKNE 240
Query: 241 LQKPGVISSKRPLPNADSHLPQFSSKKPKLSDSSTPL--------------GSKLVS--V 300
+ G + KRPL +S Q S KK K+S S T + G LVS +
Sbjct: 241 VPN-GKVLGKRPL-EKNSSADQSSLKKAKISASPTSVKMKQDSVKKEIDDKGRVLVSPKM 300
Query: 301 KAKQ-------EVDDNDDHIPISQRMKKVAVSANKSLSSKKTVS-------------KVV 360
KAKQ DD+DD +PIS+R K + ++N S + K V VV
Sbjct: 301 KAKQLSTREDGTDDDDDDDVPISKRFKSDSSNSNTSSAKPKAVKLNSTSSAAKPKARNVV 360
Query: 361 SSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHGVKMIY 420
S + K +KK K SKY S+K PSSGDGQKKWT+LVHNGVIFPPPY+ HG+K++Y
Sbjct: 361 SPRSRAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWTTLVHNGVIFPPPYKPHGIKILY 420
Query: 421 KGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDDCDFTP 480
KGK VDLT EQEEVATMFAVM++TDY KP+F+ENFWNDWR+LLGK HVIQ LDDCDFTP
Sbjct: 421 KGKPVDLTIEQEEVATMFAVMRETDYYTKPQFRENFWNDWRRLLGKKHVIQKLDDCDFTP 480
Query: 481 IYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPGLFRGR 540
IY+W+ EKEKKKQM+TEEKKALKEEKMKQEEKYMWA++DGVKEK+GNFRVEPPGLFRGR
Sbjct: 481 IYEWHLEEKEKKKQMSTEEKKALKEEKMKQEEKYMWAVVDGVKEKIGNFRVEPPGLFRGR 540
Query: 541 GEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINPK 600
GEHPKMGKLK+RIHP +IT+NIGK APIPECPI GERWKEV+HDNTVTWLAFW DPINPK
Sbjct: 541 GEHPKMGKLKKRIHPCEITLNIGKGAPIPECPIAGERWKEVKHDNTVTWLAFWADPINPK 600
Query: 601 EFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAVATYLI 660
EFKYVFL A SSLKG SDKEKYEKAR L D+I NIR YTK+FT+KD RQIAVATYLI
Sbjct: 601 EFKYVFLGAGSSLKGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVATYLI 660
Query: 661 DKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVELPVF 720
DKLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN ++F+FLGKDSI+Y NTVEVE V+
Sbjct: 661 DKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVEPLVY 720
Query: 721 KAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKD 780
KAI QFQ+GKS TDDLFD+LDTSKLNAHLK+L+PGLTAKVFRTYNASITLD+ML++ TKD
Sbjct: 721 KAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQETKD 780
Query: 781 GDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDLDRAK 840
GDV +KIV+YQ ANKEVAIICNHQRTVSK+HGAQ+ +L +I EL+++LKELK +LDRAK
Sbjct: 781 GDVTQKIVVYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNLDRAK 840
Query: 841 KGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSKINYLD 884
KGKPPL+ +DGK+ R+L P EKKI+Q +AKIEK+ERDM TKEDLKTVALGTSKINYLD
Sbjct: 841 KGKPPLEGSDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLD 900
BLAST of CmaCh06G008570 vs. ExPASy Swiss-Prot
Match:
Q9FJ79 (DNA topoisomerase 1 beta OS=Arabidopsis thaliana OX=3702 GN=TOP1B PE=1 SV=1)
HSP 1 Score: 1013.8 bits (2620), Expect = 1.2e-294
Identity = 571/940 (60.74%), Postives = 687/940 (73.09%), Query Frame = 0
Query: 1 MAVETFGKAPT------FDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDV 60
MA E F K ++++DED++P+VFKR +S N+ S +
Sbjct: 1 MATEAFVKPVVPNGHDGYEDEDEDDIPLVFKR---------NSNTAATTNRPSPINNAMR 60
Query: 61 CSANGQTSNAQNRTTSLPKTSPMKSSQVGTQKA-------SNSSIQASLVKSPGTTLKVS 120
SA G T ++ + P TSP +S+ T+ + S+SS+Q S +KSP L+
Sbjct: 61 NSAIGSTKSSPPMRS--PLTSPNRSASSSTRSSMMKPALPSSSSVQRSTLKSP---LRDD 120
Query: 121 DSTDSQSRH-LVKAAVKEENDRHPTNESSDSEDDKPLSFRLKGKS-----NPPGKGLVPT 180
S ++ R+ KA ++D DSEDDKPLS RLK S P G T
Sbjct: 121 RSVVAKERNGFGKAPSVSKSD------DEDSEDDKPLSARLKLDSKEVTKQPSSSGRGST 180
Query: 181 VLKNKVEKSSADS------------DDEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISK 240
+ V+KS+ D+ P+SS K+S S ++K+PL++
Sbjct: 181 --QQAVQKSNMRPQGLSDYTKKKVLDERAPMSSTVQTKTSVGTSSSKPVHIEQKRPLVNN 240
Query: 241 VHQNGL---ISGDKLQKPGVISSKRPLPNADSHLPQFSSKKPKLSDSSTPL--------- 300
+ +NGL G Q P +KRPL S Q S K+PKLS+ + P+
Sbjct: 241 IDRNGLKPKTEGHSSQAP----AKRPLEKGSSS-NQSSVKRPKLSEPARPVKVEQGSHIS 300
Query: 301 ------GSKLVSVK--------AKQEVDDNDDHIPISQRMKKVAVSANKSLSSKKTVSKV 360
G L + K K++ D DDH+PI+ RMK + S NKS S+K + SK+
Sbjct: 301 ATQDAKGKNLDASKPLRANQATVKEDNSDGDDHVPIASRMKSDS-SNNKSSSAKPSSSKM 360
Query: 361 VSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHGVKMI 420
++SS + +K K VK SKY KS+K LP SGDGQKKW +L HNGVIFPPPY+ HGVK++
Sbjct: 361 IASSSRTIAQKPNKWVKDSKYSKSSKSLP-SGDGQKKWKTLQHNGVIFPPPYKRHGVKIL 420
Query: 421 YKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDDCDFT 480
++GK VDLTPEQEEVATMFAVM++T+Y +KP+F+ENFWNDWRKLLGKNH+I++LDDCDFT
Sbjct: 421 FQGKPVDLTPEQEEVATMFAVMRETEYYKKPKFRENFWNDWRKLLGKNHMIKSLDDCDFT 480
Query: 481 PIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPGLFRG 540
PIY+WY EKE KKQMT EEK+ +KEEK+KQEEKYMWA+LDGV+E++GNFRVEPPGLFRG
Sbjct: 481 PIYEWYMQEKETKKQMTAEEKRIVKEEKLKQEEKYMWAVLDGVRERIGNFRVEPPGLFRG 540
Query: 541 RGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINP 600
RGEHPKMGKLK+RI P DITINIGK+APIPECPIPGERWKEV+HDNTVTWLAFW+DPINP
Sbjct: 541 RGEHPKMGKLKKRIRPCDITINIGKEAPIPECPIPGERWKEVKHDNTVTWLAFWSDPINP 600
Query: 601 KEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAVATYL 660
KEFKYVFLAASSSLKGQSDKEKYEKARKL ++I +IR AYTKDF +KD T+RQIAVATYL
Sbjct: 601 KEFKYVFLAASSSLKGQSDKEKYEKARKLHNHIGSIRAAYTKDFNNKDVTKRQIAVATYL 660
Query: 661 IDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVELPV 720
IDKLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN L+F+FLGKDSI+Y NTVEVE V
Sbjct: 661 IDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEPLV 720
Query: 721 FKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTK 780
+KAI QFQ+GKS TDDLFD+LDTSKLN HLK+LM GLTAKVFRTYNASITLD ML++ T+
Sbjct: 721 YKAIGQFQAGKSKTDDLFDELDTSKLNTHLKELMAGLTAKVFRTYNASITLDLMLSKETR 780
Query: 781 DGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDLDRA 840
DGDV EK+V+YQ ANKEVAIICNHQRTVSKSHGAQ+ +L KI ELR+ +KEL IDLDRA
Sbjct: 781 DGDVPEKVVVYQQANKEVAIICNHQRTVSKSHGAQVEKLAVKIEELREQIKELNIDLDRA 840
Query: 841 KKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSKINYL 884
KKG+ PL +DGK+KRNLTPE LEKKI QT KIEK+ERDMQTKED+KTVALGTSKINY+
Sbjct: 841 KKGRTPLMGSDGKRKRNLTPEALEKKIMQTQGKIEKMERDMQTKEDMKTVALGTSKINYM 900
BLAST of CmaCh06G008570 vs. ExPASy Swiss-Prot
Match:
P93119 (DNA topoisomerase 1 OS=Daucus carota OX=4039 GN=TOP1 PE=2 SV=1)
HSP 1 Score: 835.9 bits (2158), Expect = 4.3e-241
Identity = 487/824 (59.10%), Postives = 582/824 (70.63%), Query Frame = 0
Query: 99 SPGTTLKVSDSTDSQSRHLVKAAVKEENDRHPTNESSDSEDDKPLSFR-----LKGKSNP 158
+PG T+ + ++++ +KEE + S DS+DDKPLS + L G S+
Sbjct: 4 NPGITV-----IKQNASNVMEKTLKEEGQSR--SNSEDSDDDKPLSHKLSSGALNGNSHH 63
Query: 159 PGKG---LVPTVLKNKVEKSSADSDDEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISKV 218
G P+ + + +DE+ LSS+ + + + S DE KPL S
Sbjct: 64 IRMGSNLSCPSPYTSPKPRIIKGPEDEMLLSSELQLNAGA--SNAESSDSDESKPLAS-- 123
Query: 219 HQNGLISGDKLQKPGVISSKRPLPNADSHLPQFSSKKPKLSDSSTPLGSKLVSVKAKQEV 278
+L+ P +KRPL + P SKK KLS+ S P KL + A+QE
Sbjct: 124 ---------ELEDPSSSLNKRPLIQPKNSDPS-PSKKAKLSEPSAPTNRKLKT--AEQEE 183
Query: 279 DDNDDHIPISQRMKKVAVSANKSLSSKKTVSKVVSSSMKKTFKKSKKPVKKSKYVKSTKL 338
DD IS R KK A+K KK VS+S+ K V SK +K +
Sbjct: 184 AAADDDPSISNRNKKSTTPASKVSDKKKRPD--VSASVNK--------VDFSKSLKVPLV 243
Query: 339 LPSSGDGQKKWTSLVHNGVIFPPPYQTHGVKMIYKGKLVDLTPEQEEVATMFAVMKDTDY 398
L +GQ LVHNGVIFPP Y+ HGVKM+Y+ VDLTPEQEEVATMFAVM +T+Y
Sbjct: 244 LVKGRNGQ----PLVHNGVIFPPLYKPHGVKMLYRENPVDLTPEQEEVATMFAVMLETEY 303
Query: 399 MQKPRFKENFWNDWRKLLGKNHVIQNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEE 458
M KP+F+ENF +DWRK+LG+ H+IQNL+DCDFTPIY+W+Q EKEKKKQM+T+EKKA+KE
Sbjct: 304 MTKPKFRENFMSDWRKILGEKHIIQNLEDCDFTPIYEWHQREKEKKKQMSTDEKKAIKEG 363
Query: 459 KMK-QEEKYMWAILDGV-KEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIHPS-DITINIG 518
K + ++EKYMWA++DG+ +EKVGNFRV + + K ++K+ ++ DITINIG
Sbjct: 364 KDETRKEKYMWAVVDGMSREKVGNFRVGTTRVVQRSWRASKDPQVKKNVYSQIDITINIG 423
Query: 519 KDAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYE 578
KDAPIPE PIPGERWKE+RHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKG+ +EKYE
Sbjct: 424 KDAPIPEPPIPGERWKEIRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGKVTREKYE 483
Query: 579 KARKLKDYIKNIR-NAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 638
K+RKLKDYI+ IR AYTKDF SKD +RQIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 484 KSRKLKDYIEGIRAAAYTKDFASKDSKKRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 543
Query: 639 TLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDT 698
TLKVENV+ PN+L+F+FLGKDSI+Y+N VEVE VF AI QF+SGK G DDLFD+LDT
Sbjct: 544 TLKVENVETKRPNILKFDFLGKDSIRYQNEVEVEPRVFSAIEQFRSGKEGGDDLFDQLDT 603
Query: 699 SKLNAHLKDLMPGLTAKVFRTYNASITLDDM-----LNRGTKDGDVAEKIVIYQHANKEV 758
SKLNAHLK+LMPGLTAKVFRTYNASITLD+M L+R TK GDVAEK+V+YQHANKEV
Sbjct: 604 SKLNAHLKELMPGLTAKVFRTYNASITLDEMVRCKLLSRETKGGDVAEKVVVYQHANKEV 663
Query: 759 AIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDLDRAKKGKPPLKDADGKQKRNL 818
AIICNHQRTVSKSH AQM RLNEKI EL+ +LKEL+ DL R KGKPPLK++DGK KRNL
Sbjct: 664 AIICNHQRTVSKSHSAQMVRLNEKIEELKGLLKELQEDLTRVNKGKPPLKNSDGKPKRNL 723
Query: 819 TPE----------------------VLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSK 878
+ + KKI+QTN KIEK+ERD +TKEDLKTVALGTSK
Sbjct: 724 NLKRYKGKLLKLIQKLRKWSETRRLSVTKKIAQTNTKIEKMERDKETKEDLKTVALGTSK 783
Query: 879 INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
INYLDPRITVAWCKRH+VPIEKIFNKSLLAKFAWAMDV FRF
Sbjct: 784 INYLDPRITVAWCKRHDVPIEKIFNKSLLAKFAWAMDVVLIFRF 790
BLAST of CmaCh06G008570 vs. ExPASy Swiss-Prot
Match:
P07799 (DNA topoisomerase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=top1 PE=1 SV=2)
HSP 1 Score: 531.9 bits (1369), Expect = 1.3e-149
Identity = 346/857 (40.37%), Postives = 479/857 (55.89%), Query Frame = 0
Query: 107 SDSTDSQSRHLVKAAVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNK 166
SDS R + + ++E SDS ++ PLS L NK
Sbjct: 6 SDSVSLSIRRRQRRGSSKRISMKESDEESDSSENHPLSESL-----------------NK 65
Query: 167 VEKSSADSDDEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGV 226
KS +D DD IP+ + ++SS+ + N KK +KV NG + K
Sbjct: 66 KSKSESDEDD-IPIRKR---RASSKKNMSNS---SSKKR--AKVMGNGGLKNGK------ 125
Query: 227 ISSKRPLPNADSHLPQFSSKKPKLSDSSTPLGSKLVSVKA-KQEVDDNDDHIPISQRMKK 286
K + + + + PK S GSK + A K+E D DD +P+
Sbjct: 126 ---KTAVVKEEEDFNEIAKPSPKHKRVSKANGSKNGAKSAVKKEESDTDDSVPLR----- 185
Query: 287 VAVSANKSLSSKKTVSKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLV 346
AVS K + S++ ++ + + K+ S + D +KWT+L
Sbjct: 186 -AVSTVSLTPYKSELPSGASTTQNRSPNDEEDEDEDYKWWTSENI-----DDTQKWTTLE 245
Query: 347 HNGVIFPPPYQ--THGVKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWND 406
HNGVIF PPY+ VK+IY G V+L PE EEVA +A M +TD+ + P F++NF+ D
Sbjct: 246 HNGVIFAPPYEPLPKNVKLIYDGNPVNLPPEAEEVAGFYAAMLETDHAKNPVFQDNFFRD 305
Query: 407 WRKLLGK---NHVIQNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMW 466
+ K+ + NH I+ CDFT ++ ++ ++E+KK M E+KKA+K++K ++EEKY W
Sbjct: 306 FLKVCDECNFNHNIKEFSKCDFTQMFHHFEQKREEKKSMPKEQKKAIKQKKDEEEEKYKW 365
Query: 467 AILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGE 526
ILDG KEKVGNFR+EPPGLFRGRG HPK G LKRR++P ITINIG+ P+PE P+PG
Sbjct: 366 CILDGRKEKVGNFRIEPPGLFRGRGSHPKTGSLKRRVYPEQITINIGEGVPVPE-PLPGH 425
Query: 527 RWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIR 586
+W EV+HDNTVTWLA W++ IN KYVFLAA SSLKGQSD +KYEK+RKLKDYI +IR
Sbjct: 426 QWAEVKHDNTVTWLATWHENIN-NNVKYVFLAAGSSLKGQSDLKKYEKSRKLKDYIDDIR 485
Query: 587 NAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNL 646
Y KD S+ RQ A YLID ALRAGNEK +DEADTVGCC+L+ E+V PP
Sbjct: 486 KGYRKDLKSELTVERQRGTAMYLIDVFALRAGNEKGEDEADTVGCCSLRYEHVTLKPPRT 545
Query: 647 LEFNFLGKDSIKYENTVEVELPVFKAITQF-QSGKSGTDDLFDKLDTSKLNAHLKDLMPG 706
+ F+FLGKDSI+Y N VEV+ VFK + F + K D +FD+L T+ LN +L LM G
Sbjct: 546 VVFDFLGKDSIRYYNEVEVDPQVFKNLKIFKRPPKKEGDLIFDRLSTNSLNKYLTSLMDG 605
Query: 707 LTAKVFRTYNASITLDDMLNRGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQM 766
L+AKVFRTYNAS T+ + L + K+ +A+KI+ Y AN+ VAI+CNHQR+V+K+H QM
Sbjct: 606 LSAKVFRTYNASYTMAEELKKMPKNLTLADKILFYNRANRTVAILCNHQRSVTKNHDVQM 665
Query: 767 SRLNEKISEL---RDILKELKIDLD-RAKKGKPPL------------------------- 826
R E+I L R L+++ ++L+ + K KP L
Sbjct: 666 ERFAERIKALQYQRMRLRKMMLNLEPKLAKSKPELLAKEEGITDSWIVKHHETLYELEKE 725
Query: 827 ----------------------------------------KDADGKQKR----NLTPEVL 884
DA+ K K+ + E L
Sbjct: 726 KIKKKFDRENEKLAAEDPKSVLPESELEVRLKAADELKKALDAELKSKKVDPGRSSMEQL 785
BLAST of CmaCh06G008570 vs. ExPASy Swiss-Prot
Match:
Q54RC3 (DNA topoisomerase 1 OS=Dictyostelium discoideum OX=44689 GN=top1 PE=3 SV=1)
HSP 1 Score: 523.1 bits (1346), Expect = 6.2e-147
Identity = 334/832 (40.14%), Postives = 477/832 (57.33%), Query Frame = 0
Query: 98 KSPGTTLKVSDSTDSQSRHLVKAAVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKG 157
K P + SDS+DS S + + + +++SS S+ D P + N P G
Sbjct: 87 KKPVDSSSDSDSSDSSSDS--DSDSSDSDSDSSSSDSSSSDSDVPKKKPISKIPNKP-SG 146
Query: 158 LVPTVLKNKVEKSSADSDDEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLIS 217
V KN + ++ + + SK K S + D + S
Sbjct: 147 TVSKTSKNSPKTTTTTTTTTTTVKSKPAPKVKPEQSSSDDSSSDSSD---DSSDDSSSDS 206
Query: 218 GDKLQKPGVISSKRPLPNADSHLPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHI 277
+ +KP SK+P + KK T +K VK + EV +
Sbjct: 207 SSEEEKPKKKPSKKPA----------AVKKEITVKKETTTTTKKTPVKKEVEV-KKETKT 266
Query: 278 PISQRMKKVAVSANKSLSSKKTVSKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDG 337
++++KK S + K T K ++ +K ++ + ++ + V D
Sbjct: 267 TTTKKVKK-EESDDDGEDEKTTTKKKTTTRKRKLKEEEEGEEEEEEGVNKWWDKEDDEDD 326
Query: 338 QKKWTSLVHNGVIFPPPYQTHGVKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFK 397
KWT+L+HNG +FPP Y HG+K +Y GK+V LTP+QEEVAT +A +TD+++K FK
Sbjct: 327 GTKWTTLIHNGPVFPPAYVPHGIKFMYDGKVVKLTPKQEEVATFYANYLETDHVKKQAFK 386
Query: 398 ENFWNDWRKLL--GKNHVIQNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQE 457
+NF+ +++ LL + +++ +D CDF+ I+ +T+KE++K + EEK A EK K +
Sbjct: 387 DNFFKEFKGLLTSEQKEIVKKMDKCDFSHIHTHLKTKKEQRKARSKEEKDAETAEKKKIQ 446
Query: 458 EKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPEC 517
EK+ +A +DG KEKVGN+ +EPPGLF GRG+HPK G LK+RI PSD+T+NIG+ IP
Sbjct: 447 EKHGFATIDGFKEKVGNYMIEPPGLFLGRGQHPKTGMLKQRIMPSDVTLNIGEGEVIPPS 506
Query: 518 PIPGERWKEVRHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDY 577
PIPGE+WKE+ H+NTVTWLAFW + +N FKYV+LA SS +KGQ+D++K+E AR LK+
Sbjct: 507 PIPGEKWKEIVHNNTVTWLAFWRESVN-GGFKYVWLAPSSKIKGQADRKKFEVARGLKNC 566
Query: 578 IKNIRNAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKA 637
I +IR Y K F + +RQ+AVA YLID LALR GNEK +D+ADTVGCC+L+VE++K
Sbjct: 567 IGDIRKGYQKSFNDESTEKRQLAVALYLIDFLALRVGNEKGEDQADTVGCCSLRVEHIKL 626
Query: 638 VPPNLLEFNFLGKDSIKYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKD 697
N + +FLGKDS++Y NTV++ +K + F GK TD LFD L ++LN HLK
Sbjct: 627 ESNNTITLDFLGKDSMRYLNTVQIREDAYKVLKTFVKGKKPTDLLFDSLTVTQLNNHLKK 686
Query: 698 LMPGLTAKVFRTYNASITLDDMLNR-GTKD-GDVAEKIVIYQHANKEVAIICNHQRTVSK 757
M GL+AKVFRTYNASITL L++ TK+ + EKI+ Y N+EVAI+CNHQ+ K
Sbjct: 687 QMTGLSAKVFRTYNASITLQKELDKMDTKEFQSIDEKILFYNRCNREVAILCNHQKAPPK 746
Query: 758 SHGAQMSRLNEKISELRDILKELKIDLDRAKKGKPP------------------------ 817
+ MS+++EKI ELRD+ DL R K GK P
Sbjct: 747 NLAETMSKIDEKIQELRDLQ-----DLCRIKIGKTPKSQQEDIESREAERLPKLIQLAIT 806
Query: 818 -LKDADGK--------------QKRNLTPEV---LEKKISQTNAKIEKIERDMQTKEDLK 877
KD D + +K P+ +++KI++ +I+K E K++LK
Sbjct: 807 NKKDKDKEKTDKEISFDVKAAFEKSRTLPDAKGKIKEKIAKYEEQIKKQEILKTGKDELK 866
Query: 878 TVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
TVALGTSKINYLDPRITVAWCK+++VP++KIF KSL KF W+ DV D+ F
Sbjct: 867 TVALGTSKINYLDPRITVAWCKKNKVPVDKIFTKSLRDKFPWS-DVGTDYIF 893
BLAST of CmaCh06G008570 vs. ExPASy TrEMBL
Match:
A0A6J1L1R3 (DNA topoisomerase I OS=Cucurbita maxima OX=3661 GN=LOC111498332 PE=3 SV=1)
HSP 1 Score: 1722.2 bits (4459), Expect = 0.0e+00
Identity = 883/883 (100.00%), Postives = 883/883 (100.00%), Query Frame = 0
Query: 1 MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ 60
MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ
Sbjct: 1 MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ 60
Query: 61 TSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRHLVKA 120
TSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRHLVKA
Sbjct: 61 TSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRHLVKA 120
Query: 121 AVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSDDEIPL 180
AVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSDDEIPL
Sbjct: 121 AVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSDDEIPL 180
Query: 181 SSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPNADSHL 240
SSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPNADSHL
Sbjct: 181 SSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPNADSHL 240
Query: 241 PQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKSLSSKKTV 300
PQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKSLSSKKTV
Sbjct: 241 PQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKSLSSKKTV 300
Query: 301 SKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHGV 360
SKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHGV
Sbjct: 301 SKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHGV 360
Query: 361 KMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDDC 420
KMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDDC
Sbjct: 361 KMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDDC 420
Query: 421 DFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPGL 480
DFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPGL
Sbjct: 421 DFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPGL 480
Query: 481 FRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWNDP 540
FRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWNDP
Sbjct: 481 FRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWNDP 540
Query: 541 INPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAVA 600
INPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAVA
Sbjct: 541 INPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAVA 600
Query: 601 TYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVE 660
TYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVE
Sbjct: 601 TYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVE 660
Query: 661 LPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNR 720
LPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNR
Sbjct: 661 LPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNR 720
Query: 721 GTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDL 780
GTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDL
Sbjct: 721 GTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDL 780
Query: 781 DRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSKI 840
DRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSKI
Sbjct: 781 DRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSKI 840
Query: 841 NYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
NYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 NYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 883
BLAST of CmaCh06G008570 vs. ExPASy TrEMBL
Match:
A0A6J1FIM6 (DNA topoisomerase I OS=Cucurbita moschata OX=3662 GN=LOC111446061 PE=3 SV=1)
HSP 1 Score: 1683.3 bits (4358), Expect = 0.0e+00
Identity = 863/884 (97.62%), Postives = 872/884 (98.64%), Query Frame = 0
Query: 1 MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ 60
MAVETFGKAP FDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCS NGQ
Sbjct: 1 MAVETFGKAPMFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSPNGQ 60
Query: 61 TSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRHLVKA 120
+SNAQNRTTSLPKTSPMKSS+VGTQKASNSSIQA LVKSPGTTLKVSDSTDSQS+HLVKA
Sbjct: 61 SSNAQNRTTSLPKTSPMKSSEVGTQKASNSSIQAPLVKSPGTTLKVSDSTDSQSKHLVKA 120
Query: 121 AVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSDDEIPL 180
AVKEE+DRHPTNE+SDSEDDKPLSFRLKG SNPPGKGLVPTVLKNKVEKSS DSDD IPL
Sbjct: 121 AVKEESDRHPTNETSDSEDDKPLSFRLKGNSNPPGKGLVPTVLKNKVEKSSGDSDDGIPL 180
Query: 181 SSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPNADSH- 240
SSKFHMKS+SRVSGGNQHGFDEKKPLISKVHQNG SGDKLQKPGVISSKRPLPNADSH
Sbjct: 181 SSKFHMKSTSRVSGGNQHGFDEKKPLISKVHQNGFTSGDKLQKPGVISSKRPLPNADSHS 240
Query: 241 LPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKSLSSKKT 300
PQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDD+DDHIPISQRMKKVA+SANKSLSSKKT
Sbjct: 241 SPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDDDDHIPISQRMKKVALSANKSLSSKKT 300
Query: 301 VSKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHG 360
VSKVVSSSMKKT KKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHG
Sbjct: 301 VSKVVSSSMKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHG 360
Query: 361 VKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDD 420
VKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKP+FKENFWNDWRKLLGKNHVIQNLDD
Sbjct: 361 VKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQNLDD 420
Query: 421 CDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPG 480
CDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPG
Sbjct: 421 CDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPG 480
Query: 481 LFRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWND 540
LFRGRGEHPKMGKLKRRIHP DITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWND
Sbjct: 481 LFRGRGEHPKMGKLKRRIHPKDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWND 540
Query: 541 PINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAV 600
PINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAV
Sbjct: 541 PINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAV 600
Query: 601 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEV 660
ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEV
Sbjct: 601 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEV 660
Query: 661 ELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLN 720
ELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLN
Sbjct: 661 ELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLN 720
Query: 721 RGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKID 780
RGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKID
Sbjct: 721 RGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKID 780
Query: 781 LDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSK 840
LDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSK
Sbjct: 781 LDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSK 840
Query: 841 INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
BLAST of CmaCh06G008570 vs. ExPASy TrEMBL
Match:
A0A6J1KZE0 (DNA topoisomerase I OS=Cucurbita maxima OX=3661 GN=LOC111500229 PE=3 SV=1)
HSP 1 Score: 1521.9 bits (3939), Expect = 0.0e+00
Identity = 787/889 (88.53%), Postives = 826/889 (92.91%), Query Frame = 0
Query: 1 MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAK----QRLNKLSGRQGSDVCS 60
MAVETFGKA FD+DDEDNMPIVFKRSSASRQNQL+SE K QRLN+LSGR GSD CS
Sbjct: 1 MAVETFGKATMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 ANGQTSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRH 120
NGQ+SNAQ R TSLPKTSPM+ ++G+QKAS SSIQ LVKS GTTLKVSDS DS+ +
Sbjct: 61 TNGQSSNAQKRMTSLPKTSPMR-PEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQ 120
Query: 121 LVKAAVKEENDR-HPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSD 180
LV AAVKEEND HP E+SDSEDDKPLS RLKG SN P KG +PTV KNK++KSS DSD
Sbjct: 121 LVNAAVKEENDSIHPAQENSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSD 180
Query: 181 DEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPN 240
DE+PLSSKF MKS+S V GG QHGFDEKKPL SKVHQNG S DKLQKP V+SSKRPLPN
Sbjct: 181 DEVPLSSKFRMKSASGVLGGKQHGFDEKKPLDSKVHQNGSTSSDKLQKPAVVSSKRPLPN 240
Query: 241 ADSH-LPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKSL 300
ADSH Q SSKKPKLSDSSTPL + VS+KAKQEV D+DDHIPISQRM K++ + NKS
Sbjct: 241 ADSHSSSQISSKKPKLSDSSTPLSTHTVSLKAKQEVVDDDDHIPISQRM-KMSAAVNKSS 300
Query: 301 SSKKTVSKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPP 360
SKKTVSKV SSS+KKT KKSKKPVKKSKYVKSTKLLPSSGDGQKKWT+LVHNGVIFPPP
Sbjct: 301 GSKKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVI 420
YQTHGVK+++KGK VDLTPEQEEVATMFAVMKDTDYMQKP+FKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEK+KQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLK+RI PSDITINIGKDAPIPECPIPG+RWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWL 540
Query: 541 AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTR 600
AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LKDYIKNIRN+YTKDFTSKDPTR
Sbjct: 541 AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSG+DDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILK 780
DDMLNRGTKDG+V+EKIV YQHANKEVAIICNHQRTVSKSHGAQM+RLNEKISELRDILK
Sbjct: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVA 840
ELKIDLDRAKKGKPPLK +DGKQKRNLTPE LEKKISQTNAKIEKIERDM+TKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
BLAST of CmaCh06G008570 vs. ExPASy TrEMBL
Match:
A0A6J1EWI0 (DNA topoisomerase I OS=Cucurbita moschata OX=3662 GN=LOC111438616 PE=3 SV=1)
HSP 1 Score: 1519.6 bits (3933), Expect = 0.0e+00
Identity = 786/889 (88.41%), Postives = 826/889 (92.91%), Query Frame = 0
Query: 1 MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAK----QRLNKLSGRQGSDVCS 60
MAVETFGKAP FD+DDEDNMPIVFKRSSASRQNQL+SE K QRLN+LSGR GSD CS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 ANGQTSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRH 120
ANGQ+SNAQ R TSLPKTSPM+ ++G+QKA+ SSIQ LVKS GTTLKVSDS DS+ +
Sbjct: 61 ANGQSSNAQKRMTSLPKTSPMR-PEIGSQKAAKSSIQEPLVKSLGTTLKVSDSMDSRPKQ 120
Query: 121 LVKAAVKEENDR-HPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSD 180
L AAVKEEND HPT E+SDSEDDKPLS RLKG SN P KG +PTV KNK++KSS DSD
Sbjct: 121 LANAAVKEENDSIHPTQENSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSD 180
Query: 181 DEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPN 240
DE+PLSSKF MKS+S V GG QHGF EKKPL SKVHQNG S DKLQKP V+SSKRPLPN
Sbjct: 181 DEVPLSSKFQMKSASGVLGGKQHGFHEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPN 240
Query: 241 ADSH-LPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKSL 300
ADSH Q SSKKPKLSDSSTPL + VS+KAKQEV D+DDHIPISQRM K++ + NKS
Sbjct: 241 ADSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVVDDDDHIPISQRM-KMSAAVNKSS 300
Query: 301 SSKKTVSKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPP 360
SKKTVSKV SSS+KKT KKSKKPVKKSKYVKSTKLLPSSGDGQKKWT+LVHNGVIFPPP
Sbjct: 301 GSKKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVI 420
YQTHGVK+++KGK VDLT EQEEVATMFAVMKDTDYMQKP+FKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKILHKGKPVDLTTEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEK+KQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLK+RI PSDITINIGKDAPIPECPIPG+RWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWL 540
Query: 541 AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTR 600
AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LKDYIKNIRN+YTKDFTSKDPTR
Sbjct: 541 AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSG+DDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILK 780
DDMLNRGTKDG+V+EKIV YQHANKEVAIICNHQRTVSKSHGAQM+RLNEKISELRDILK
Sbjct: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILK 780
Query: 781 ELKIDLDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVA 840
ELKIDLDRAKKGKPPLK +DGKQKRNLTPE LEKKISQTNAKIEKIERDM+TKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
BLAST of CmaCh06G008570 vs. ExPASy TrEMBL
Match:
A0A1S3BM72 (DNA topoisomerase I OS=Cucumis melo OX=3656 GN=LOC103491068 PE=3 SV=1)
HSP 1 Score: 1505.0 bits (3895), Expect = 0.0e+00
Identity = 781/890 (87.75%), Postives = 821/890 (92.25%), Query Frame = 0
Query: 1 MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAK----QRLNKLSGRQGSDVCS 60
MAVETFGKAP FD+DDEDNMPIVFKRSSASRQNQLDSE K QRLNKL GRQGSD+CS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLDSEIKHSQAQRLNKLPGRQGSDLCS 60
Query: 61 ANGQTSNAQNRTTSLPKTSPMKSSQVGTQKASNSS-IQASLVKSPGTTLKVSDSTDSQSR 120
NGQ+SN Q R TSLPKTSPM+ S++G+QKA SS IQ L KS G +LK SDS DS+ +
Sbjct: 61 TNGQSSNNQKRMTSLPKTSPMR-SEIGSQKAPKSSPIQEPLTKSLGISLKASDSMDSRPK 120
Query: 121 HLVKAAVKEEN-DRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADS 180
+LV AAVKEEN +P+ E+SDSEDDKPLS RLKG SN P KGLV T+ KNKV+KSS DS
Sbjct: 121 NLVNAAVKEENVSINPSQENSDSEDDKPLSIRLKGNSNQPNKGLVSTIPKNKVKKSSGDS 180
Query: 181 DDEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLP 240
DDE+PLSSKF MK +S G Q GFDEKKPL+ KVHQNG S DKLQKP V+SSKRPLP
Sbjct: 181 DDEVPLSSKFQMKHASGPMGSKQLGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLP 240
Query: 241 NADSHLP-QFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKS 300
N DSH P QFS+KKPKLSDSS+PL SKLVS+KAKQEVDD+DD IPISQR+KK + NKS
Sbjct: 241 NEDSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDDDDIPISQRLKKTPATVNKS 300
Query: 301 LSSKKTVSKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPP 360
SSK TVSKVVSSS+KKTFKKSKKPVKKSKYVKSTKLLPS+GDGQKKWT+LVHNGVIFPP
Sbjct: 301 SSSKPTVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPP 360
Query: 361 PYQTHGVKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHV 420
PYQTHGVKM+YKGK VDLTP+QEEVATMFAVMKDTDYM KP+FKENFWNDWRKLLGKNHV
Sbjct: 361 PYQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHV 420
Query: 421 IQNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNF 480
IQNLDDCDFTPIYDWYQ EKEKKKQMTTEEKKALKEEK+KQEEKYMWAILDGVKEKVGNF
Sbjct: 421 IQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNF 480
Query: 481 RVEPPGLFRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTW 540
RVEPPGLFRGRGEHPKMGKLKRRI PSDITINIGK APIPECPIPGERWKEVRHDNTVTW
Sbjct: 481 RVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTW 540
Query: 541 LAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPT 600
LAFWNDPIN KEFKYVFLAASSSLKGQSDKEKYEKAR LKDYIKNIRNAYTKDFTSKDPT
Sbjct: 541 LAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARVLKDYIKNIRNAYTKDFTSKDPT 600
Query: 601 RRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKY 660
RRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSI+Y
Sbjct: 601 RRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRY 660
Query: 661 ENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASIT 720
ENTVEVELPVFKAITQFQSGKSGTDDLFDKLDT+KLNAHLKDLMPGLTAKVFRTYNASIT
Sbjct: 661 ENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLKDLMPGLTAKVFRTYNASIT 720
Query: 721 LDDMLNRGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDIL 780
LDDMLNRGTKDG+V+EKIV YQHANKEVAIICNHQRTVSKSHGAQM+RLNEKISELRDIL
Sbjct: 721 LDDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIL 780
Query: 781 KELKIDLDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTV 840
KELKIDLDRAKKGKPPLK +DGKQKRNLTPE LEKKISQTNAKIEKIERDM+TKEDLKTV
Sbjct: 781 KELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTV 840
Query: 841 ALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
ALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 ALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 889
BLAST of CmaCh06G008570 vs. NCBI nr
Match:
XP_023005283.1 (DNA topoisomerase 1 beta-like [Cucurbita maxima] >XP_023005284.1 DNA topoisomerase 1 beta-like [Cucurbita maxima] >XP_023005285.1 DNA topoisomerase 1 beta-like [Cucurbita maxima] >XP_023005286.1 DNA topoisomerase 1 beta-like [Cucurbita maxima])
HSP 1 Score: 1722.2 bits (4459), Expect = 0.0e+00
Identity = 883/883 (100.00%), Postives = 883/883 (100.00%), Query Frame = 0
Query: 1 MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ 60
MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ
Sbjct: 1 MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ 60
Query: 61 TSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRHLVKA 120
TSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRHLVKA
Sbjct: 61 TSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRHLVKA 120
Query: 121 AVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSDDEIPL 180
AVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSDDEIPL
Sbjct: 121 AVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSDDEIPL 180
Query: 181 SSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPNADSHL 240
SSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPNADSHL
Sbjct: 181 SSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPNADSHL 240
Query: 241 PQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKSLSSKKTV 300
PQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKSLSSKKTV
Sbjct: 241 PQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKSLSSKKTV 300
Query: 301 SKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHGV 360
SKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHGV
Sbjct: 301 SKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHGV 360
Query: 361 KMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDDC 420
KMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDDC
Sbjct: 361 KMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDDC 420
Query: 421 DFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPGL 480
DFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPGL
Sbjct: 421 DFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPGL 480
Query: 481 FRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWNDP 540
FRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWNDP
Sbjct: 481 FRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWNDP 540
Query: 541 INPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAVA 600
INPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAVA
Sbjct: 541 INPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAVA 600
Query: 601 TYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVE 660
TYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVE
Sbjct: 601 TYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVE 660
Query: 661 LPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNR 720
LPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNR
Sbjct: 661 LPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNR 720
Query: 721 GTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDL 780
GTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDL
Sbjct: 721 GTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDL 780
Query: 781 DRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSKI 840
DRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSKI
Sbjct: 781 DRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSKI 840
Query: 841 NYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
NYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 NYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 883
BLAST of CmaCh06G008570 vs. NCBI nr
Match:
XP_022940477.1 (DNA topoisomerase 1 alpha-like [Cucurbita moschata] >XP_022940487.1 DNA topoisomerase 1 alpha-like [Cucurbita moschata] >XP_022940496.1 DNA topoisomerase 1 alpha-like [Cucurbita moschata])
HSP 1 Score: 1683.3 bits (4358), Expect = 0.0e+00
Identity = 863/884 (97.62%), Postives = 872/884 (98.64%), Query Frame = 0
Query: 1 MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ 60
MAVETFGKAP FDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCS NGQ
Sbjct: 1 MAVETFGKAPMFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSPNGQ 60
Query: 61 TSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRHLVKA 120
+SNAQNRTTSLPKTSPMKSS+VGTQKASNSSIQA LVKSPGTTLKVSDSTDSQS+HLVKA
Sbjct: 61 SSNAQNRTTSLPKTSPMKSSEVGTQKASNSSIQAPLVKSPGTTLKVSDSTDSQSKHLVKA 120
Query: 121 AVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSDDEIPL 180
AVKEE+DRHPTNE+SDSEDDKPLSFRLKG SNPPGKGLVPTVLKNKVEKSS DSDD IPL
Sbjct: 121 AVKEESDRHPTNETSDSEDDKPLSFRLKGNSNPPGKGLVPTVLKNKVEKSSGDSDDGIPL 180
Query: 181 SSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPNADSH- 240
SSKFHMKS+SRVSGGNQHGFDEKKPLISKVHQNG SGDKLQKPGVISSKRPLPNADSH
Sbjct: 181 SSKFHMKSTSRVSGGNQHGFDEKKPLISKVHQNGFTSGDKLQKPGVISSKRPLPNADSHS 240
Query: 241 LPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKSLSSKKT 300
PQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDD+DDHIPISQRMKKVA+SANKSLSSKKT
Sbjct: 241 SPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDDDDHIPISQRMKKVALSANKSLSSKKT 300
Query: 301 VSKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHG 360
VSKVVSSSMKKT KKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHG
Sbjct: 301 VSKVVSSSMKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHG 360
Query: 361 VKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDD 420
VKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKP+FKENFWNDWRKLLGKNHVIQNLDD
Sbjct: 361 VKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQNLDD 420
Query: 421 CDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPG 480
CDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPG
Sbjct: 421 CDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPG 480
Query: 481 LFRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWND 540
LFRGRGEHPKMGKLKRRIHP DITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWND
Sbjct: 481 LFRGRGEHPKMGKLKRRIHPKDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWND 540
Query: 541 PINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAV 600
PINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAV
Sbjct: 541 PINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAV 600
Query: 601 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEV 660
ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEV
Sbjct: 601 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEV 660
Query: 661 ELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLN 720
ELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLN
Sbjct: 661 ELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLN 720
Query: 721 RGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKID 780
RGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKID
Sbjct: 721 RGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKID 780
Query: 781 LDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSK 840
LDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSK
Sbjct: 781 LDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSK 840
Query: 841 INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
BLAST of CmaCh06G008570 vs. NCBI nr
Match:
XP_023520897.1 (DNA topoisomerase 1 alpha-like [Cucurbita pepo subsp. pepo] >XP_023520898.1 DNA topoisomerase 1 alpha-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1680.6 bits (4351), Expect = 0.0e+00
Identity = 864/885 (97.63%), Postives = 873/885 (98.64%), Query Frame = 0
Query: 1 MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ 60
MA+ETFGKAP FDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ
Sbjct: 1 MAIETFGKAPMFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ 60
Query: 61 TSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRHLVKA 120
+SNAQNRTTSLPKTSPMKSS+VGTQKASNSS QA VKSPGTTLKVSDSTDSQS+HLVKA
Sbjct: 61 SSNAQNRTTSLPKTSPMKSSEVGTQKASNSSTQAPPVKSPGTTLKVSDSTDSQSKHLVKA 120
Query: 121 AVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSDDEIPL 180
AVKEE+DRHPTNESSDSEDDKPLSFRLKG SNPPGKGLVPTVLKNKVEKSS DSDDEIPL
Sbjct: 121 AVKEESDRHPTNESSDSEDDKPLSFRLKGNSNPPGKGLVPTVLKNKVEKSSGDSDDEIPL 180
Query: 181 SSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPNADSH- 240
SSKFHMKS+SRVSGGNQHGFDEKKPLISKVHQNGL SGDKLQKPGVISSKRPLPNADSH
Sbjct: 181 SSKFHMKSTSRVSGGNQHGFDEKKPLISKVHQNGLTSGDKLQKPGVISSKRPLPNADSHS 240
Query: 241 LPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKK-VAVSANKSLSSKK 300
PQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDD+DDHIPISQRMKK VAVSANKSLSSKK
Sbjct: 241 SPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDDDDHIPISQRMKKVVAVSANKSLSSKK 300
Query: 301 TVSKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTH 360
TVSKVVSSSMKKT KKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTH
Sbjct: 301 TVSKVVSSSMKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTH 360
Query: 361 GVKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLD 420
GVKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKP+FKENFWNDWRKLLGKNHVIQNLD
Sbjct: 361 GVKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQNLD 420
Query: 421 DCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPP 480
DCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPP
Sbjct: 421 DCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPP 480
Query: 481 GLFRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWN 540
GLFRGRGEHPKMGKLKRRIHP DITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWN
Sbjct: 481 GLFRGRGEHPKMGKLKRRIHPKDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWN 540
Query: 541 DPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIA 600
DPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIA
Sbjct: 541 DPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIA 600
Query: 601 VATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVE 660
VATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVE
Sbjct: 601 VATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVE 660
Query: 661 VELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDML 720
VELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDML
Sbjct: 661 VELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDML 720
Query: 721 NRGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKI 780
NRG+KDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKI
Sbjct: 721 NRGSKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKI 780
Query: 781 DLDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTS 840
DLDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTS
Sbjct: 781 DLDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTS 840
Query: 841 KINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
KINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 KINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 885
BLAST of CmaCh06G008570 vs. NCBI nr
Match:
KAG6596930.1 (DNA topoisomerase 1 alpha, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028410.1 DNA topoisomerase 1 alpha [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1680.6 bits (4351), Expect = 0.0e+00
Identity = 862/884 (97.51%), Postives = 871/884 (98.53%), Query Frame = 0
Query: 1 MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSANGQ 60
MAVETFGKAP FDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCS NGQ
Sbjct: 1 MAVETFGKAPMFDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDVCSPNGQ 60
Query: 61 TSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRHLVKA 120
+SNAQNRTTSLPKTSPMKSS+VGTQKASNSSIQA LVKSPGTTL VSDSTDSQS+HLV A
Sbjct: 61 SSNAQNRTTSLPKTSPMKSSEVGTQKASNSSIQAPLVKSPGTTLTVSDSTDSQSKHLVMA 120
Query: 121 AVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSDDEIPL 180
+VKEE+DRHPTNESSDSEDDKPLSFRLKG SNPPGKGLVPTVLKNKVEKSS DSDDEIPL
Sbjct: 121 SVKEESDRHPTNESSDSEDDKPLSFRLKGNSNPPGKGLVPTVLKNKVEKSSGDSDDEIPL 180
Query: 181 SSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPNADSH- 240
SSKFHMKS+SRVSGGNQHGFDEKKPLISKVHQNGL SGDKLQKPGVISSKRPLPNADSH
Sbjct: 181 SSKFHMKSTSRVSGGNQHGFDEKKPLISKVHQNGLTSGDKLQKPGVISSKRPLPNADSHS 240
Query: 241 LPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKSLSSKKT 300
PQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDD+DDHIPISQRMKKVAVSANK LSSKKT
Sbjct: 241 SPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDDDDHIPISQRMKKVAVSANKPLSSKKT 300
Query: 301 VSKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHG 360
VSKVVSSSMKKT KKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHG
Sbjct: 301 VSKVVSSSMKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHG 360
Query: 361 VKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDD 420
VK+IYKGKLVDLTPEQEEVATMFAVMKDTDYMQKP+FKENFWNDWRKLLGKNHVIQNLDD
Sbjct: 361 VKIIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVIQNLDD 420
Query: 421 CDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPG 480
CDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPG
Sbjct: 421 CDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPG 480
Query: 481 LFRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWND 540
LFRGRGEHPKMGKLKRRIHP DITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWND
Sbjct: 481 LFRGRGEHPKMGKLKRRIHPKDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWND 540
Query: 541 PINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAV 600
PINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAV
Sbjct: 541 PINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAV 600
Query: 601 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEV 660
ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEV
Sbjct: 601 ATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEV 660
Query: 661 ELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLN 720
ELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLN
Sbjct: 661 ELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLN 720
Query: 721 RGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKID 780
RGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKID
Sbjct: 721 RGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKID 780
Query: 781 LDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSK 840
LDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSK
Sbjct: 781 LDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSK 840
Query: 841 INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 INYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
BLAST of CmaCh06G008570 vs. NCBI nr
Match:
XP_023553297.1 (DNA topoisomerase 1 beta-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1524.6 bits (3946), Expect = 0.0e+00
Identity = 787/889 (88.53%), Postives = 828/889 (93.14%), Query Frame = 0
Query: 1 MAVETFGKAPTFDEDDEDNMPIVFKRSSASRQNQLDSEAK----QRLNKLSGRQGSDVCS 60
MAVETFGKAP FD+DDEDNMPIVFKRSSASRQNQL+SE K QRLN+LSGR GSD CS
Sbjct: 1 MAVETFGKAPMFDDDDEDNMPIVFKRSSASRQNQLNSEVKHSQSQRLNQLSGRPGSDACS 60
Query: 61 ANGQTSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTDSQSRH 120
ANGQ+SNAQ R TSLPKTSPM+ ++G+QKAS SSIQ LVKS GTTLKVSDS DS+ +
Sbjct: 61 ANGQSSNAQKRMTSLPKTSPMR-PEIGSQKASKSSIQEPLVKSLGTTLKVSDSMDSRPKQ 120
Query: 121 LVKAAVKEENDR-HPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNKVEKSSADSD 180
L AAVKEEND HPT ++SDSEDDKPLS RLKG SN P KG +PTV KNK++KSS DSD
Sbjct: 121 LANAAVKEENDSIHPTQDNSDSEDDKPLSIRLKGNSNHPSKGPIPTVQKNKIKKSSEDSD 180
Query: 181 DEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDKLQKPGVISSKRPLPN 240
DE+PLSSKF MKS+S V GG QHGFDEKKPL SKVHQNG S DKLQKP V+SSKRPLPN
Sbjct: 181 DEVPLSSKFQMKSASGVLGGRQHGFDEKKPLDSKVHQNGSTSRDKLQKPAVVSSKRPLPN 240
Query: 241 ADSH-LPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPISQRMKKVAVSANKSL 300
ADSH Q SSKKPKLSDSSTPL + VS+KAKQEV D+DDHIPISQRM K++ + NKS
Sbjct: 241 ADSHSSSQISSKKPKLSDSSTPLSTNTVSLKAKQEVADDDDHIPISQRM-KMSAAVNKSS 300
Query: 301 SSKKTVSKVVSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPP 360
SKKTVSKV SSS+KKT KKSKKPVKKSKYVKSTKLLPSSGDGQKKWT+LVHNGVIFPPP
Sbjct: 301 GSKKTVSKVASSSIKKTLKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTTLVHNGVIFPPP 360
Query: 361 YQTHGVKMIYKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVI 420
YQTHGVK+++KGK VDLTPEQEEVATMFAVMKDTDYMQKP+FKENFWNDWRKLLGKNHVI
Sbjct: 361 YQTHGVKILHKGKPVDLTPEQEEVATMFAVMKDTDYMQKPKFKENFWNDWRKLLGKNHVI 420
Query: 421 QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFR 480
QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEK+KQEEKYMWAILDGVKEKVGNFR
Sbjct: 421 QNLDDCDFTPIYDWYQTEKEKKKQMTTEEKKALKEEKLKQEEKYMWAILDGVKEKVGNFR 480
Query: 481 VEPPGLFRGRGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWL 540
VEPPGLFRGRGEHPKMGKLK+RI PSDITINIGKDAPIPECPIPG+RWKEVRHDNTVTWL
Sbjct: 481 VEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGQRWKEVRHDNTVTWL 540
Query: 541 AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTR 600
AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKAR LKDYIKNIRN+YTKDFTSKDPTR
Sbjct: 541 AFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARMLKDYIKNIRNSYTKDFTSKDPTR 600
Query: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE 660
RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE
Sbjct: 601 RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYE 660
Query: 661 NTVEVELPVFKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
NTVEVELPVFKAITQFQSGKSG+DDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL
Sbjct: 661 NTVEVELPVFKAITQFQSGKSGSDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITL 720
Query: 721 DDMLNRGTKDGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILK 780
DDMLNRGTKDG+V+EKIV YQHANKEVAIICNHQRTVSKSHGAQM+RLNEKISELRDI+K
Sbjct: 721 DDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDIVK 780
Query: 781 ELKIDLDRAKKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVA 840
ELKIDLDRAKKGKPPLK +DGKQKRNLTPE LEKKISQTNAKIEKIERDM+TKEDLKTVA
Sbjct: 781 ELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVA 840
Query: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF
Sbjct: 841 LGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 887
BLAST of CmaCh06G008570 vs. TAIR 10
Match:
AT5G55300.1 (DNA topoisomerase I alpha )
HSP 1 Score: 1015.4 bits (2624), Expect = 2.8e-296
Identity = 575/939 (61.24%), Postives = 678/939 (72.20%), Query Frame = 0
Query: 1 MAVETFGKAPTFDE---DDEDNMPIVFKRSS--ASRQNQLDSEAKQR----LNKLSGRQG 60
M ET K P D D +D+ P+ FKR++ AS NQ S +++ K+S +
Sbjct: 1 MGTETVSK-PVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPMR- 60
Query: 61 SDVCSANGQTSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTD 120
S V S NG TT KTS +KSS +SS +AS KSP S D
Sbjct: 61 SPVTSPNG--------TTPSNKTSIVKSSM------PSSSSKASPAKSPLRNDMPSTVKD 120
Query: 121 SQSRHLVKAAVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNK----- 180
++ K E++ DSEDD+PLS L G P V + K
Sbjct: 121 RSQLQKDQSECKIEHE--------DSEDDRPLSSILSGNKGPTSSRQVSSPQPEKKNNGD 180
Query: 181 --VEKSSA----DSDDEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDK 240
++++S +SDDE P+SS F K S +SGGNQ DEKKPL+ K+HQNG ++
Sbjct: 181 RPLDRASRIIKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTVKNE 240
Query: 241 LQKPGVISSKRPLPNADSHLPQFSSKKPKLSDSSTPL--------------GSKLVS--V 300
+ G + KRPL +S Q S KK K+S S T + G LVS +
Sbjct: 241 VPN-GKVLGKRPL-EKNSSADQSSLKKAKISASPTSVKMKQDSVKKEIDDKGRVLVSPKM 300
Query: 301 KAKQ-------EVDDNDDHIPISQRMKKVAVSANKSLSSKKTVS-------------KVV 360
KAKQ DD+DD +PIS+R K + ++N S + K V VV
Sbjct: 301 KAKQLSTREDGTDDDDDDDVPISKRFKSDSSNSNTSSAKPKAVKLNSTSSAAKPKARNVV 360
Query: 361 SSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHGVKMIY 420
S + K +KK K SKY S+K PSSGDGQKKWT+LVHNGVIFPPPY+ HG+K++Y
Sbjct: 361 SPRSRAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWTTLVHNGVIFPPPYKPHGIKILY 420
Query: 421 KGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDDCDFTP 480
KGK VDLT EQEEVATMFAVM++TDY KP+F+ENFWNDWR+LLGK HVIQ LDDCDFTP
Sbjct: 421 KGKPVDLTIEQEEVATMFAVMRETDYYTKPQFRENFWNDWRRLLGKKHVIQKLDDCDFTP 480
Query: 481 IYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPGLFRGR 540
IY+W+ EKEKKKQM+TEEKKALKEEKMKQEEKYMWA++DGVKEK+GNFRVEPPGLFRGR
Sbjct: 481 IYEWHLEEKEKKKQMSTEEKKALKEEKMKQEEKYMWAVVDGVKEKIGNFRVEPPGLFRGR 540
Query: 541 GEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINPK 600
GEHPKMGKLK+RIHP +IT+NIGK APIPECPI GERWKEV+HDNTVTWLAFW DPINPK
Sbjct: 541 GEHPKMGKLKKRIHPCEITLNIGKGAPIPECPIAGERWKEVKHDNTVTWLAFWADPINPK 600
Query: 601 EFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAVATYLI 660
EFKYVFL A SSLKG SDKEKYEKAR L D+I NIR YTK+FT+KD RQIAVATYLI
Sbjct: 601 EFKYVFLGAGSSLKGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVATYLI 660
Query: 661 DKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVELPVF 720
DKLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN ++F+FLGKDSI+Y NTVEVE V+
Sbjct: 661 DKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVEPLVY 720
Query: 721 KAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKD 780
KAI QFQ+GKS TDDLFD+LDTSKLNAHLK+L+PGLTAKVFRTYNASITLD+ML++ TKD
Sbjct: 721 KAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQETKD 780
Query: 781 GDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDLDRAK 840
GDV +KIV+YQ ANKEVAIICNHQRTVSK+HGAQ+ +L +I EL+++LKELK +LDRAK
Sbjct: 781 GDVTQKIVVYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNLDRAK 840
Query: 841 KGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSKINYLD 884
KGKPPL+ +DGK+ R+L P EKKI+Q +AKIEK+ERDM TKEDLKTVALGTSKINYLD
Sbjct: 841 KGKPPLEGSDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLD 900
BLAST of CmaCh06G008570 vs. TAIR 10
Match:
AT5G55310.1 (DNA topoisomerase 1 beta )
HSP 1 Score: 1013.8 bits (2620), Expect = 8.2e-296
Identity = 571/940 (60.74%), Postives = 687/940 (73.09%), Query Frame = 0
Query: 1 MAVETFGKAPT------FDEDDEDNMPIVFKRSSASRQNQLDSEAKQRLNKLSGRQGSDV 60
MA E F K ++++DED++P+VFKR +S N+ S +
Sbjct: 1 MATEAFVKPVVPNGHDGYEDEDEDDIPLVFKR---------NSNTAATTNRPSPINNAMR 60
Query: 61 CSANGQTSNAQNRTTSLPKTSPMKSSQVGTQKA-------SNSSIQASLVKSPGTTLKVS 120
SA G T ++ + P TSP +S+ T+ + S+SS+Q S +KSP L+
Sbjct: 61 NSAIGSTKSSPPMRS--PLTSPNRSASSSTRSSMMKPALPSSSSVQRSTLKSP---LRDD 120
Query: 121 DSTDSQSRH-LVKAAVKEENDRHPTNESSDSEDDKPLSFRLKGKS-----NPPGKGLVPT 180
S ++ R+ KA ++D DSEDDKPLS RLK S P G T
Sbjct: 121 RSVVAKERNGFGKAPSVSKSD------DEDSEDDKPLSARLKLDSKEVTKQPSSSGRGST 180
Query: 181 VLKNKVEKSSADS------------DDEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISK 240
+ V+KS+ D+ P+SS K+S S ++K+PL++
Sbjct: 181 --QQAVQKSNMRPQGLSDYTKKKVLDERAPMSSTVQTKTSVGTSSSKPVHIEQKRPLVNN 240
Query: 241 VHQNGL---ISGDKLQKPGVISSKRPLPNADSHLPQFSSKKPKLSDSSTPL--------- 300
+ +NGL G Q P +KRPL S Q S K+PKLS+ + P+
Sbjct: 241 IDRNGLKPKTEGHSSQAP----AKRPLEKGSSS-NQSSVKRPKLSEPARPVKVEQGSHIS 300
Query: 301 ------GSKLVSVK--------AKQEVDDNDDHIPISQRMKKVAVSANKSLSSKKTVSKV 360
G L + K K++ D DDH+PI+ RMK + S NKS S+K + SK+
Sbjct: 301 ATQDAKGKNLDASKPLRANQATVKEDNSDGDDHVPIASRMKSDS-SNNKSSSAKPSSSKM 360
Query: 361 VSSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHGVKMI 420
++SS + +K K VK SKY KS+K LP SGDGQKKW +L HNGVIFPPPY+ HGVK++
Sbjct: 361 IASSSRTIAQKPNKWVKDSKYSKSSKSLP-SGDGQKKWKTLQHNGVIFPPPYKRHGVKIL 420
Query: 421 YKGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDDCDFT 480
++GK VDLTPEQEEVATMFAVM++T+Y +KP+F+ENFWNDWRKLLGKNH+I++LDDCDFT
Sbjct: 421 FQGKPVDLTPEQEEVATMFAVMRETEYYKKPKFRENFWNDWRKLLGKNHMIKSLDDCDFT 480
Query: 481 PIYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPGLFRG 540
PIY+WY EKE KKQMT EEK+ +KEEK+KQEEKYMWA+LDGV+E++GNFRVEPPGLFRG
Sbjct: 481 PIYEWYMQEKETKKQMTAEEKRIVKEEKLKQEEKYMWAVLDGVRERIGNFRVEPPGLFRG 540
Query: 541 RGEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINP 600
RGEHPKMGKLK+RI P DITINIGK+APIPECPIPGERWKEV+HDNTVTWLAFW+DPINP
Sbjct: 541 RGEHPKMGKLKKRIRPCDITINIGKEAPIPECPIPGERWKEVKHDNTVTWLAFWSDPINP 600
Query: 601 KEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAVATYL 660
KEFKYVFLAASSSLKGQSDKEKYEKARKL ++I +IR AYTKDF +KD T+RQIAVATYL
Sbjct: 601 KEFKYVFLAASSSLKGQSDKEKYEKARKLHNHIGSIRAAYTKDFNNKDVTKRQIAVATYL 660
Query: 661 IDKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVELPV 720
IDKLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN L+F+FLGKDSI+Y NTVEVE V
Sbjct: 661 IDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEPLV 720
Query: 721 FKAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTK 780
+KAI QFQ+GKS TDDLFD+LDTSKLN HLK+LM GLTAKVFRTYNASITLD ML++ T+
Sbjct: 721 YKAIGQFQAGKSKTDDLFDELDTSKLNTHLKELMAGLTAKVFRTYNASITLDLMLSKETR 780
Query: 781 DGDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDLDRA 840
DGDV EK+V+YQ ANKEVAIICNHQRTVSKSHGAQ+ +L KI ELR+ +KEL IDLDRA
Sbjct: 781 DGDVPEKVVVYQQANKEVAIICNHQRTVSKSHGAQVEKLAVKIEELREQIKELNIDLDRA 840
Query: 841 KKGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSKINYL 884
KKG+ PL +DGK+KRNLTPE LEKKI QT KIEK+ERDMQTKED+KTVALGTSKINY+
Sbjct: 841 KKGRTPLMGSDGKRKRNLTPEALEKKIMQTQGKIEKMERDMQTKEDMKTVALGTSKINYM 900
BLAST of CmaCh06G008570 vs. TAIR 10
Match:
AT5G55300.2 (DNA topoisomerase I alpha )
HSP 1 Score: 1010.0 bits (2610), Expect = 1.2e-294
Identity = 573/936 (61.22%), Postives = 675/936 (72.12%), Query Frame = 0
Query: 1 MAVETFGKAPTFDE---DDEDNMPIVFKRSS--ASRQNQLDSEAKQR----LNKLSGRQG 60
M ET K P D D +D+ P+ FKR++ AS NQ S +++ K+S +
Sbjct: 1 MGTETVSK-PVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPMR- 60
Query: 61 SDVCSANGQTSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTD 120
S V S NG TT KTS +KSS +SS +AS KSP S D
Sbjct: 61 SPVTSPNG--------TTPSNKTSIVKSSM------PSSSSKASPAKSPLRNDMPSTVKD 120
Query: 121 SQSRHLVKAAVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNK----- 180
++ K E++ DSEDD+PLS L G P V + K
Sbjct: 121 RSQLQKDQSECKIEHE--------DSEDDRPLSSILSGNKGPTSSRQVSSPQPEKKNNGD 180
Query: 181 --VEKSSA----DSDDEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDK 240
++++S +SDDE P+SS F K S +SGGNQ DEKKPL+ K+HQNG ++
Sbjct: 181 RPLDRASRIIKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTVKNE 240
Query: 241 LQKPGVISSKRPLPNADSHLPQFSSKKPKLSDSSTPL--------------GSKLVS--V 300
+ G + KRPL +S Q S KK K+S S T + G LVS +
Sbjct: 241 VPN-GKVLGKRPL-EKNSSADQSSLKKAKISASPTSVKMKQDSVKKEIDDKGRVLVSPKM 300
Query: 301 KAKQ-------EVDDNDDHIPISQRMKKVAVSANKSLSSKKTVS-------------KVV 360
KAKQ DD+DD +PIS+R K + ++N S + K V VV
Sbjct: 301 KAKQLSTREDGTDDDDDDDVPISKRFKSDSSNSNTSSAKPKAVKLNSTSSAAKPKARNVV 360
Query: 361 SSSMKKTFKKSKKPVKKSKYVKSTKLLPSSGDGQKKWTSLVHNGVIFPPPYQTHGVKMIY 420
S + K +KK K SKY S+K PSSGDGQKKWT+LVHNGVIFPPPY+ HG+K++Y
Sbjct: 361 SPRSRAMTKNTKKVTKDSKYSTSSKSSPSSGDGQKKWTTLVHNGVIFPPPYKPHGIKILY 420
Query: 421 KGKLVDLTPEQEEVATMFAVMKDTDYMQKPRFKENFWNDWRKLLGKNHVIQNLDDCDFTP 480
KGK VDLT EQEEVATMFAVM++TDY KP+F+ENFWNDWR+LLGK HVIQ LDDCDFTP
Sbjct: 421 KGKPVDLTIEQEEVATMFAVMRETDYYTKPQFRENFWNDWRRLLGKKHVIQKLDDCDFTP 480
Query: 481 IYDWYQTEKEKKKQMTTEEKKALKEEKMKQEEKYMWAILDGVKEKVGNFRVEPPGLFRGR 540
IY+W+ EKEKKKQM+TEEKKALKEEKMKQEEKYMWA++DGVKEK+GNFRVEPPGLFRGR
Sbjct: 481 IYEWHLEEKEKKKQMSTEEKKALKEEKMKQEEKYMWAVVDGVKEKIGNFRVEPPGLFRGR 540
Query: 541 GEHPKMGKLKRRIHPSDITINIGKDAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINPK 600
GEHPKMGKLK+RIHP +IT+NIGK APIPECPI GERWKEV+HDNTVTWLAFW DPINPK
Sbjct: 541 GEHPKMGKLKKRIHPCEITLNIGKGAPIPECPIAGERWKEVKHDNTVTWLAFWADPINPK 600
Query: 601 EFKYVFLAASSSLKGQSDKEKYEKARKLKDYIKNIRNAYTKDFTSKDPTRRQIAVATYLI 660
EFKYVFL A SSLKG SDKEKYEKAR L D+I NIR YTK+FT+KD RQIAVATYLI
Sbjct: 601 EFKYVFLGAGSSLKGLSDKEKYEKARNLTDHIDNIRTTYTKNFTAKDVKMRQIAVATYLI 660
Query: 661 DKLALRAGNEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVELPVF 720
DKLALRAGNEKDDDEADTVGCCTLKV NV+ +PPN ++F+FLGKDSI+Y NTVEVE V+
Sbjct: 661 DKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVEPLVY 720
Query: 721 KAITQFQSGKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKD 780
KAI QFQ+GKS TDDLFD+LDTSKLNAHLK+L+PGLTAKVFRTYNASITLD+ML++ TKD
Sbjct: 721 KAIGQFQAGKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQETKD 780
Query: 781 GDVAEKIVIYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDLDRAK 840
GDV +KIV+YQ ANKEVAIICNHQRTVSK+HGAQ+ +L +I EL+++LKELK +LDRAK
Sbjct: 781 GDVTQKIVVYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNLDRAK 840
Query: 841 KGKPPLKDADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSKINYLD 881
KGKPPL+ +DGK+ R+L P EKKI+Q +AKIEK+ERDM TKEDLKTVALGTSKINYLD
Sbjct: 841 KGKPPLEGSDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLD 900
BLAST of CmaCh06G008570 vs. TAIR 10
Match:
AT5G55300.3 (DNA topoisomerase I alpha )
HSP 1 Score: 427.2 bits (1097), Expect = 3.3e-119
Identity = 208/271 (76.75%), Postives = 244/271 (90.04%), Query Frame = 0
Query: 613 NEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIKYENTVEVELPVFKAITQFQS 672
++ DDDEADTVGCCTLKV NV+ +PPN ++F+FLGKDSI+Y NTVEVE V+KAI QFQ+
Sbjct: 291 DDDDDDEADTVGCCTLKVGNVECIPPNKIKFDFLGKDSIQYVNTVEVEPLVYKAIGQFQA 350
Query: 673 GKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKDGDVAEKIV 732
GKS TDDLFD+LDTSKLNAHLK+L+PGLTAKVFRTYNASITLD+ML++ TKDGDV +KIV
Sbjct: 351 GKSKTDDLFDELDTSKLNAHLKELVPGLTAKVFRTYNASITLDEMLSQETKDGDVTQKIV 410
Query: 733 IYQHANKEVAIICNHQRTVSKSHGAQMSRLNEKISELRDILKELKIDLDRAKKGKPPLKD 792
+YQ ANKEVAIICNHQRTVSK+HGAQ+ +L +I EL+++LKELK +LDRAKKGKPPL+
Sbjct: 411 VYQKANKEVAIICNHQRTVSKTHGAQIEKLTARIEELKEVLKELKTNLDRAKKGKPPLEG 470
Query: 793 ADGKQKRNLTPEVLEKKISQTNAKIEKIERDMQTKEDLKTVALGTSKINYLDPRITVAWC 852
+DGK+ R+L P EKKI+Q +AKIEK+ERDM TKEDLKTVALGTSKINYLDPRITVAWC
Sbjct: 471 SDGKKIRSLEPNAWEKKIAQQSAKIEKMERDMHTKEDLKTVALGTSKINYLDPRITVAWC 530
Query: 853 KRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 884
KRHEVPIEKIF KSLL KFAWAMDV+P++RF
Sbjct: 531 KRHEVPIEKIFTKSLLEKFAWAMDVEPEYRF 561
HSP 2 Score: 88.2 bits (217), Expect = 3.6e-17
Identity = 108/312 (34.62%), Postives = 150/312 (48.08%), Query Frame = 0
Query: 1 MAVETFGKAPTFDE---DDEDNMPIVFKRSS--ASRQNQLDSEAKQR----LNKLSGRQG 60
M ET K P D D +D+ P+ FKR++ AS NQ S +++ K+S +
Sbjct: 1 MGTETVSK-PVMDNGSGDSDDDKPLAFKRNNTVASNSNQSKSNSQRSKAVPTTKVSPMR- 60
Query: 61 SDVCSANGQTSNAQNRTTSLPKTSPMKSSQVGTQKASNSSIQASLVKSPGTTLKVSDSTD 120
S V S NG TT KTS +KSS +SS +AS KSP S D
Sbjct: 61 SPVTSPNG--------TTPSNKTSIVKSSM------PSSSSKASPAKSPLRNDMPSTVKD 120
Query: 121 SQSRHLVKAAVKEENDRHPTNESSDSEDDKPLSFRLKGKSNPPGKGLVPTVLKNK----- 180
++ K E++ DSEDD+PLS L G P V + K
Sbjct: 121 RSQLQKDQSECKIEHE--------DSEDDRPLSSILSGNKGPTSSRQVSSPQPEKKNNGD 180
Query: 181 --VEKSSA----DSDDEIPLSSKFHMKSSSRVSGGNQHGFDEKKPLISKVHQNGLISGDK 240
++++S +SDDE P+SS F K S +SGGNQ DEKKPL+ K+HQNG ++
Sbjct: 181 RPLDRASRIIKDESDDETPISSMFRKKIDSGMSGGNQLSNDEKKPLVQKLHQNGSTVKNE 240
Query: 241 LQKPGVISSKRPLPNADSHLPQFSSKKPKLSDSSTPLGSKLVSVKAKQEVDDNDDHIPIS 293
+ G + KRPL +S Q S KK K+S S T + K SV K+E+DD + +S
Sbjct: 241 VPN-GKVLGKRPL-EKNSSADQSSLKKAKISASPTSVKMKQDSV--KKEIDDK-GRVLVS 283
BLAST of CmaCh06G008570 vs. TAIR 10
Match:
AT4G26701.1 (DNA binding;DNA topoisomerase type Is )
HSP 1 Score: 131.0 bits (328), Expect = 4.9e-30
Identity = 61/68 (89.71%), Postives = 64/68 (94.12%), Query Frame = 0
Query: 816 KIEKIERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWAM 875
KIEK+ERDMQTKEDLKTVALGTSKINY+DPRITVAWCKRHE PIEKIFNKSLL KFAWAM
Sbjct: 2 KIEKMERDMQTKEDLKTVALGTSKINYMDPRITVAWCKRHEAPIEKIFNKSLLEKFAWAM 61
Query: 876 DVDPDFRF 884
DV+P F F
Sbjct: 62 DVEPHFTF 69
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P30181 | 4.0e-295 | 61.24 | DNA topoisomerase 1 alpha OS=Arabidopsis thaliana OX=3702 GN=TOP1A PE=1 SV=1 | [more] |
Q9FJ79 | 1.2e-294 | 60.74 | DNA topoisomerase 1 beta OS=Arabidopsis thaliana OX=3702 GN=TOP1B PE=1 SV=1 | [more] |
P93119 | 4.3e-241 | 59.10 | DNA topoisomerase 1 OS=Daucus carota OX=4039 GN=TOP1 PE=2 SV=1 | [more] |
P07799 | 1.3e-149 | 40.37 | DNA topoisomerase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=28... | [more] |
Q54RC3 | 6.2e-147 | 40.14 | DNA topoisomerase 1 OS=Dictyostelium discoideum OX=44689 GN=top1 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1L1R3 | 0.0e+00 | 100.00 | DNA topoisomerase I OS=Cucurbita maxima OX=3661 GN=LOC111498332 PE=3 SV=1 | [more] |
A0A6J1FIM6 | 0.0e+00 | 97.62 | DNA topoisomerase I OS=Cucurbita moschata OX=3662 GN=LOC111446061 PE=3 SV=1 | [more] |
A0A6J1KZE0 | 0.0e+00 | 88.53 | DNA topoisomerase I OS=Cucurbita maxima OX=3661 GN=LOC111500229 PE=3 SV=1 | [more] |
A0A6J1EWI0 | 0.0e+00 | 88.41 | DNA topoisomerase I OS=Cucurbita moschata OX=3662 GN=LOC111438616 PE=3 SV=1 | [more] |
A0A1S3BM72 | 0.0e+00 | 87.75 | DNA topoisomerase I OS=Cucumis melo OX=3656 GN=LOC103491068 PE=3 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
XP_023005283.1 | 0.0e+00 | 100.00 | DNA topoisomerase 1 beta-like [Cucurbita maxima] >XP_023005284.1 DNA topoisomera... | [more] |
XP_022940477.1 | 0.0e+00 | 97.62 | DNA topoisomerase 1 alpha-like [Cucurbita moschata] >XP_022940487.1 DNA topoisom... | [more] |
XP_023520897.1 | 0.0e+00 | 97.63 | DNA topoisomerase 1 alpha-like [Cucurbita pepo subsp. pepo] >XP_023520898.1 DNA ... | [more] |
KAG6596930.1 | 0.0e+00 | 97.51 | DNA topoisomerase 1 alpha, partial [Cucurbita argyrosperma subsp. sororia] >KAG7... | [more] |
XP_023553297.1 | 0.0e+00 | 88.53 | DNA topoisomerase 1 beta-like [Cucurbita pepo subsp. pepo] | [more] |