CmaCh06G007950 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATGCTCTTTTGCTTCAATTTCTCTGTGGCATTGACGTCGATTTGATTGAGGCTAAGGCCTGGTTCTTTCCGAATTAGAGCAGCTATTGATATCAAAGGGGCTCGGATTTGAATGGAGGGAGATAGCATTACTCGATTTGAGTCCTCTGGTACTGTTCGTTTCTATTTCTGTAGTGGATTTATGGAGTGTGTTCGTGCTTCTTTTCGAATCCCCAAAATTTGATTTCGTTTGTTGTGTTATTGCAGCGTTTTCGTTTGTTGGTTATGAGTTCTGAGCCTTGTGGAGCTCGGAAGAGATATGGCCCTCATTCGGAGAGTTTCGTCGAGCTTTCCTCGAGTTGTTGGGTTTGCTAACAGGTCCTTGTATTCTTTGAATTCTCCTTGTGAGTCGTTGGACTCCCCGACCTCGTCCTCTTTTATTCATGGATTCCATGTCTTCCATTGTCCTGTAAGTTCTGCTCTAGCGGTAATTTTCATTACATTTTTGGTTCGGTTGCTGATTGAATTAGACTGCTTCTACAACTCTATGCTCTGTTCTTATATGCTTTGATATTTCCAAGTTGGGGTATAAAGATAAGGCGCAAATTTCTTGTTGATACTTATATTGTTGTTCGTGGGGGTGTGAAGTCTAAGGTGCAAATTGAATTGGTTTTGTGATAGGATGCTGTGGGAATCGTTGCTAAGTTGTCGGAGTGTATAGCTTCAAGAGGGGGAAACATACTAAATGCTGATGTTTTTGTACCTGAAAACAAGAGCGTCTTCCATTACAGAAGGTAATTTTTGGCTTCTTTTGCTTGTGGTGCTTTCTGAATAAATCATTTTATATGCTGGTACTATGTAGCTGCCATTTTTTTTTGTGTGTTAGTACGGGGTTTATAGATGATATGAAGCTAAAACAAGGAAGAAAGTCAAGCTACAGCTAATAAATAAATCACTCAATTGACACAGAGTATTAATAAAGTACTTCTCAATAGGAAAGACAAGTTTACACCAAGAAATAGTCAGTAGATGCTATAGAGGCCAGCTAATAAATAAATCACTCAATTGACACGTGAGCTCTTATACCATTTGTACCAGCCCAAAACCACCATTAATAGATATTGTTTGCTTTGACCTATTATGTATTGCCATCAGCCTCCCGATTTTTAAAACGCATCTATTAGGGAGAGGTTTCCACACCCTTATAAGGAATGCTTCGTTCCCATCTGATGTGTGATCTCACAATCATACCTGTTGGGGGACCACATCCTCGTTGGCACACCGTCCGGTGTTTGGTCCTGATACCATTTGTAACAGCTCAAGCCCACTACTAGTAGATATTGTCCGCTTTGGGTTATTACTTATTGCCATCAGTCTCACGGTTTTTAAAACGTGTCTGCTAGGGAGAAGTTTCCACACCTTTATAAGGAATGCTTCGTTCCATTCTCCAACCGTATGGGACCTCACATTATAGATCCTATTATTCCTTTGGACTCGAAGATTCCAAAAAATGCAATTTTTGTAACTATACTACTCATGTTGTGGTGATCTCATTAAATGACATCGCAACTTGATTAGGGGTCTTTGAGGAATTAACAAAAAATATGATCCATTGTCGATTAAATAAAAAGGAGGTGTCTGTTAATGCGTTGTCATCGACAAAGTTGCAGACTCATTTCTTGGCCATAGTATACTCAAATTTCAATTTTGTAATCTAACTTACACAATTGCATATAAGGCTTAAGTCAATCTATTCAGACAAGAAGGACGTCCATCTTCATATTTCATTTTCTACTAGATTTTTTCTTATATCTCTATAAGTCATATCCTCCTTTCAGAAAGCATTTCTTATATTCTATCAGGAGTAGTCGATAAATTTCAAGAGTGAAACTTTTTCTTGTGTTCAAGGTGTTACTGAGGATTTGCATTAGTAACTACAATATTACAATCGTACATAATTGTTCCTTTCTGGGATATTATTGAAGACTTGCCTGATTCAATTCATGACTTGCATTTCTAGCTTGAAATGAAGAAGTATTCTGGTTGTACATGCATTGTTCCCTCGTGGGATTATTTTTGCTATGTTGTGCAGCACGGTACACTTGTGTTTGTCTGGAACAAACCAGTACAATTTTTGGTTTGTGGCCAGTCAACCTGGTTGTGATGAATATTAGGTTGAGCCTTATATCTTCGGGGAAGTAGTTTGGATTTCTCTAGTGCACTACGCTGTACTTTTCTTGATATTCAAGCTTGAACTCGTGTCTGACTTTCGCTTTATGTGCAGCCAGTTCCTTTTTGATCCTCGTAAATGGCCAAGGATGCAAATGGATGAAGATTTCCTTAGGATTTCAAAATTATTTAACGCTTGGAAATCAGTTGTCCGGGTGCCAGATCAAGACACCAAATATAAGATTGCGATTCTTGCTTCAAAATATGTATACCTCTCAATTTCATGTCATAAACTTCTTTTGTTGTAAGATTAACATTACTTTTCCCATTACAGGATCATTGTCTGGTTGACCTACTTCATCAATGGCAAGGAGGGAACCTACAAGTGGAAATAACTTGTGTTGTCAGGTAAATTTTCTGAAACTTCTTTTAATTAGTTTTGAAGTGCCCATAAACTTTCTTCTCAATCCACTTGTTTCAGTAATCATGAGAGAGCCCCCAATACCCATGTGATGTGCTTTCTTGAAAGGCATGGTATTGCTTATCATTATTTGCAAACATACAATGACAATAAGAGAGAAGGAGAGATATTGGAATTGGTGAAGAATACTGATTTTTTAGTACTTGCCAGGTACATGCAGGTAAATTAGATCATAATCCTAGTGCATTTTTACCAGCTTAGTTCTTTAGGAAAAAAAAAAACTTGTGGATAATTGTGTTGTTCCAAATCATACATACAAAGACAGATGAACAAAGTAAATGGATGTTGCAATGAAGTCTGATGCAGTTTCTGTGTTTTTAAGTGATTGATTGTGAAATTAAATATCTGATCCTGGTGATTTTCAATTTTCTTTGCAGGTATTATCTGGTGATTTCTTGAGGAGCTATGGGAATGATATAATTAACATCCACCATGGTCTCTTGCCTTCATTCAAAGGCAGTAATCCTTCAAAACAGGTTCGGAACATTATCTGGTTTTCTAGTTACATAATCCATCAACCCACCCCAATTATCTTGTGAGATTCCATGTCGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGTGTGAAAACCTCTCCCTAGCAGACACGTTTTAAAAACCTTGAGGGAAAGTCCAAAGAGGACAATATTTTCTAGTGGTGAACTTAGGCTGTTACAAATAGTTTCAGAGCTAGACACCGGGCGATTTGCTATTGAGGAGGTTGTGCCCCCACATTGGGCGATTACTAGTGAGGCGGTGTGCTAGCAAAGACATTGTGCCCCACATCAATTGAAGAAGGAAGCGAGTGCCAGCGAGGACGCTGGGTCCCGAAGGGGGATGGATTGTGAGATCCCACGTCGGTTGGGAGAGGAGAATGAAACATTCTTTACCAGGTGTGAAAACCTCTCCCTAGTAGACGCATTTTAAAATTCTTGAGAGAATGCCCGAAAGGGAAAGTCCAAACAGGACAATATTTGCTAGCGGTGGGCTTAGACCGTTACATATCTTGTAACCTTTTTTTTTCTTTGACCATAACTGTGCAACTGTGTTGATTATTTAATTTGTTATATTACATTGACAGGCGTTTAATGCTGGCGTAAAGTTAATTGGTGCTACGGCCCATTTTGTGACCGAAGAACTTGATGCTGGACCCATCATTGAGCAGATGGTATCTTTTAGGCTGTTTGATGCAACTAAATTTGCTTGTTCTCTATTGTCTTGGTCTTTATTTGTGAACCATGAGTAGCCCTTTTTTTCTGAGATTATAAACCATGTCATTCTTAACCCTTTTTTTTCTAGTGAACTATGAAGTGCAGAACCGTTAAAATCACTTTTGTTGTATTCAAGATAACTTTGCAATTAATCATTCAAAATCATTTTAATGTTTAATCGTACCTTTTTAAATGCGATTTATGCACCATCAAAATTGACTTTTAATGATAAAATAAATTAAAAAATTACTCTTGAGCTTTGCCTTTTTTTTTTTTTTTTAAAAAAATATCCATGTTTTTTCAAAAGTTGATGGTGATCTAGCTGCTGTACAGCTCTAGAAAGCATGTTAGAATCTTTTCATCATTTTAACTATGTTTCTGTTCAAAATTATCAGGTTGAAAGGGTTTCCCACAGAGATAATTTGCAGAGCTTTGTACAAAAGTCAGAGAACCTAGAAAAGCAATGCCTAACAAACGCAATTAAATCATACTGTGAACTGCGCGTCTTACCATACGAGAAGAACAGGACTGTCGTCTTTTAAGAGAATGATGAAGTATTTTTCAATCAATATACTCTTGTAAGTATACTCTTCATATATTGAATTCAAATTTCAATTTATGGATACCTATACCTCTACCTTGACTTGTTTCAACTGAACTTCCAAGTTACAAAATGAATAAAT TATGCTCTTTTGCTTCAATTTCTCTGTGGCATTGACGTCGATTTGATTGAGGCTAAGGCCTGGTTCTTTCCGAATTAGAGCAGCTATTGATATCAAAGGGGCTCGGATTTGAATGGAGGGAGATAGCATTACTCGATTTGAGTCCTCTGCGTTTTCGTTTGTTGGTTATGAGTTCTGAGCCTTGTGGAGCTCGGAAGAGATATGGCCCTCATTCGGAGAGTTTCGTCGAGCTTTCCTCGAGTTGTTGGGTTTGCTAACAGGTCCTTGTATTCTTTGAATTCTCCTTGTGAGTCGTTGGACTCCCCGACCTCGTCCTCTTTTATTCATGGATTCCATGTCTTCCATTGTCCTGATGCTGTGGGAATCGTTGCTAAGTTGTCGGAGTGTATAGCTTCAAGAGGGGGAAACATACTAAATGCTGATGTTTTTGTACCTGAAAACAAGAGCGTCTTCCATTACAGAAGCCAGTTCCTTTTTGATCCTCGTAAATGGCCAAGGATGCAAATGGATGAAGATTTCCTTAGGATTTCAAAATTATTTAACGCTTGGAAATCAGTTGTCCGGGTGCCAGATCAAGACACCAAATATAAGATTGCGATTCTTGCTTCAAAATATGATCATTGTCTGGTTGACCTACTTCATCAATGGCAAGGAGGGAACCTACAAGTGGAAATAACTTGTGTTGTCAGTAATCATGAGAGAGCCCCCAATACCCATGTGATGTGCTTTCTTGAAAGGCATGGTATTGCTTATCATTATTTGCAAACATACAATGACAATAAGAGAGAAGGAGAGATATTGGAATTGGTGAAGAATACTGATTTTTTAGTACTTGCCAGGTACATGCAGGTATTATCTGGTGATTTCTTGAGGAGCTATGGGAATGATATAATTAACATCCACCATGGTCTCTTGCCTTCATTCAAAGGCAGTAATCCTTCAAAACAGGCGTTTAATGCTGGCGTAAAGTTAATTGGTGCTACGGCCCATTTTGTGACCGAAGAACTTGATGCTGGACCCATCATTGAGCAGATGGTTGAAAGGGTTTCCCACAGAGATAATTTGCAGAGCTTTGTACAAAAGTCAGAGAACCTAGAAAAGCAATGCCTAACAAACGCAATTAAATCATACTGTGAACTGCGCGTCTTACCATACGAGAAGAACAGGACTGTCGTCTTTTAAGAGAATGATGAAGTATTTTTCAATCAATATACTCTTGTAAGTATACTCTTCATATATTGAATTCAAATTTCAATTTATGGATACCTATACCTCTACCTTGACTTGTTTCAACTGAACTTCCAAGTTACAAAATGAATAAAT ATGGCCCTCATTCGGAGAGTTTCGTCGAGCTTTCCTCGAGTTGTTGGGTTTGCTAACAGGTCCTTGTATTCTTTGAATTCTCCTTGTGAGTCGTTGGACTCCCCGACCTCGTCCTCTTTTATTCATGGATTCCATGTCTTCCATTGTCCTGATGCTGTGGGAATCGTTGCTAAGTTGTCGGAGTGTATAGCTTCAAGAGGGGGAAACATACTAAATGCTGATGTTTTTGTACCTGAAAACAAGAGCGTCTTCCATTACAGAAGCCAGTTCCTTTTTGATCCTCGTAAATGGCCAAGGATGCAAATGGATGAAGATTTCCTTAGGATTTCAAAATTATTTAACGCTTGGAAATCAGTTGTCCGGGTGCCAGATCAAGACACCAAATATAAGATTGCGATTCTTGCTTCAAAATATGATCATTGTCTGGTTGACCTACTTCATCAATGGCAAGGAGGGAACCTACAAGTGGAAATAACTTGTGTTGTCAGTAATCATGAGAGAGCCCCCAATACCCATGTGATGTGCTTTCTTGAAAGGCATGGTATTGCTTATCATTATTTGCAAACATACAATGACAATAAGAGAGAAGGAGAGATATTGGAATTGGTGAAGAATACTGATTTTTTAGTACTTGCCAGGTACATGCAGGTATTATCTGGTGATTTCTTGAGGAGCTATGGGAATGATATAATTAACATCCACCATGGTCTCTTGCCTTCATTCAAAGGCAGTAATCCTTCAAAACAGGCGTTTAATGCTGGCGTAAAGTTAATTGGTGCTACGGCCCATTTTGTGACCGAAGAACTTGATGCTGGACCCATCATTGAGCAGATGGTTGAAAGGGTTTCCCACAGAGATAATTTGCAGAGCTTTGTACAAAAGTCAGAGAACCTAGAAAAGCAATGCCTAACAAACGCAATTAAATCATACTGTGAACTGCGCGTCTTACCATACGAGAAGAACAGGACTGTCGTCTTTTAA MALIRRVSSSFPRVVGFANRSLYSLNSPCESLDSPTSSSFIHGFHVFHCPDAVGIVAKLSECIASRGGNILNADVFVPENKSVFHYRSQFLFDPRKWPRMQMDEDFLRISKLFNAWKSVVRVPDQDTKYKIAILASKYDHCLVDLLHQWQGGNLQVEITCVVSNHERAPNTHVMCFLERHGIAYHYLQTYNDNKREGEILELVKNTDFLVLARYMQVLSGDFLRSYGNDIINIHHGLLPSFKGSNPSKQAFNAGVKLIGATAHFVTEELDAGPIIEQMVERVSHRDNLQSFVQKSENLEKQCLTNAIKSYCELRVLPYEKNRTVVF Homology
BLAST of CmaCh06G007950 vs. ExPASy Swiss-Prot
Match: F4JP46 (Formyltetrahydrofolate deformylase 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PURU2 PE=1 SV=1) HSP 1 Score: 474.6 bits (1220), Expect = 9.3e-133 Identity = 236/328 (71.95%), Postives = 266/328 (81.10%), Query Frame = 0
BLAST of CmaCh06G007950 vs. ExPASy Swiss-Prot
Match: Q93YQ3 (Formyltetrahydrofolate deformylase 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PURU1 PE=1 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 4.3e-130 Identity = 230/326 (70.55%), Postives = 266/326 (81.60%), Query Frame = 0
BLAST of CmaCh06G007950 vs. ExPASy Swiss-Prot
Match: O34990 (Formyltetrahydrofolate deformylase OS=Bacillus subtilis (strain 168) OX=224308 GN=purU PE=3 SV=2) HSP 1 Score: 199.5 bits (506), Expect = 5.8e-50 Identity = 112/283 (39.58%), Postives = 169/283 (59.72%), Query Frame = 0
BLAST of CmaCh06G007950 vs. ExPASy Swiss-Prot
Match: Q55135 (Formyltetrahydrofolate deformylase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=purU PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 4.9e-49 Identity = 109/282 (38.65%), Postives = 167/282 (59.22%), Query Frame = 0
BLAST of CmaCh06G007950 vs. ExPASy Swiss-Prot
Match: P0A5T7 (Formyltetrahydrofolate deformylase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=purU PE=3 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 5.4e-40 Identity = 105/286 (36.71%), Postives = 157/286 (54.90%), Query Frame = 0
BLAST of CmaCh06G007950 vs. ExPASy TrEMBL
Match: A0A6J1L297 (formyltetrahydrofolate deformylase 2, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111498446 PE=4 SV=1) HSP 1 Score: 671.4 bits (1731), Expect = 1.9e-189 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
BLAST of CmaCh06G007950 vs. ExPASy TrEMBL
Match: A0A6J1GES7 (formyltetrahydrofolate deformylase 1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111453499 PE=4 SV=1) HSP 1 Score: 656.8 bits (1693), Expect = 4.9e-185 Identity = 319/326 (97.85%), Postives = 321/326 (98.47%), Query Frame = 0
BLAST of CmaCh06G007950 vs. ExPASy TrEMBL
Match: A0A0A0L1I1 (Formyl_trans_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G019900 PE=4 SV=1) HSP 1 Score: 610.5 bits (1573), Expect = 4.0e-171 Identity = 296/326 (90.80%), Postives = 309/326 (94.79%), Query Frame = 0
BLAST of CmaCh06G007950 vs. ExPASy TrEMBL
Match: A0A1S3BKL6 (formyltetrahydrofolate deformylase 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103490874 PE=4 SV=1) HSP 1 Score: 607.8 bits (1566), Expect = 2.6e-170 Identity = 295/326 (90.49%), Postives = 306/326 (93.87%), Query Frame = 0
BLAST of CmaCh06G007950 vs. ExPASy TrEMBL
Match: A0A6J1HMR7 (formyltetrahydrofolate deformylase 1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111465065 PE=4 SV=1) HSP 1 Score: 607.8 bits (1566), Expect = 2.6e-170 Identity = 295/326 (90.49%), Postives = 307/326 (94.17%), Query Frame = 0
BLAST of CmaCh06G007950 vs. NCBI nr
Match: XP_023005468.1 (formyltetrahydrofolate deformylase 2, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 671.4 bits (1731), Expect = 4.0e-189 Identity = 326/326 (100.00%), Postives = 326/326 (100.00%), Query Frame = 0
BLAST of CmaCh06G007950 vs. NCBI nr
Match: XP_023539074.1 (formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023539075.1 formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 657.5 bits (1695), Expect = 5.9e-185 Identity = 318/326 (97.55%), Postives = 322/326 (98.77%), Query Frame = 0
BLAST of CmaCh06G007950 vs. NCBI nr
Match: XP_022950421.1 (formyltetrahydrofolate deformylase 1, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 656.8 bits (1693), Expect = 1.0e-184 Identity = 319/326 (97.85%), Postives = 321/326 (98.47%), Query Frame = 0
BLAST of CmaCh06G007950 vs. NCBI nr
Match: KAG6596867.1 (E3 ubiquitin ligase PQT3-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 620.9 bits (1600), Expect = 6.1e-174 Identity = 303/320 (94.69%), Postives = 308/320 (96.25%), Query Frame = 0
BLAST of CmaCh06G007950 vs. NCBI nr
Match: XP_038905791.1 (formyltetrahydrofolate deformylase 1, mitochondrial-like [Benincasa hispida] >XP_038905792.1 formyltetrahydrofolate deformylase 1, mitochondrial-like [Benincasa hispida]) HSP 1 Score: 613.2 bits (1580), Expect = 1.3e-171 Identity = 296/326 (90.80%), Postives = 311/326 (95.40%), Query Frame = 0
BLAST of CmaCh06G007950 vs. TAIR 10
Match: AT4G17360.1 (Formyl transferase ) HSP 1 Score: 474.6 bits (1220), Expect = 6.6e-134 Identity = 236/328 (71.95%), Postives = 266/328 (81.10%), Query Frame = 0
BLAST of CmaCh06G007950 vs. TAIR 10
Match: AT5G47435.2 (formyltetrahydrofolate deformylase, putative ) HSP 1 Score: 465.7 bits (1197), Expect = 3.1e-131 Identity = 230/326 (70.55%), Postives = 266/326 (81.60%), Query Frame = 0
BLAST of CmaCh06G007950 vs. TAIR 10
Match: AT5G47435.1 (formyltetrahydrofolate deformylase, putative ) HSP 1 Score: 465.7 bits (1197), Expect = 3.1e-131 Identity = 230/326 (70.55%), Postives = 266/326 (81.60%), Query Frame = 0
BLAST of CmaCh06G007950 vs. TAIR 10
Match: AT1G31220.1 (Formyl transferase ) HSP 1 Score: 65.9 bits (159), Expect = 7.1e-11 Identity = 36/132 (27.27%), Postives = 67/132 (50.76%), Query Frame = 0
BLAST of CmaCh06G007950 vs. TAIR 10
Match: AT1G66520.1 (formyltransferase, putative ) HSP 1 Score: 50.8 bits (120), Expect = 2.4e-06 Identity = 24/69 (34.78%), Postives = 38/69 (55.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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