CmaCh06G005350 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G005350
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ML domain-containing protein
Location	Cma_Chr06: 2519468 .. 2523187 (+)
RNA-Seq Expression	CmaCh06G005350
Synteny	CmaCh06G005350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAAACCTTTTCAACAACGAGTATGCGTCTCTCGTGCCAATCCCTAAGGATTCCAAACGAAGTAGAACAAAGTAAATTCACAGATCAAGGGATAAAGAAAATGGATAGTCTTCATAGCTGCAAGATCCTAGGTCAACGGTTTGCTTGGTTCTTCTCTTCTTGCATTATTTTTTTATAAAATTTCTGTGTATCCCATCTGCTAAACCCCGACGAAGAAGGGATTCTTCCCGCTCTCCAATGGTGTTCGTTTCATTCAGTTTCTCCCACTCTACTCCACCGAAACCCCCATTTTTCACGCGACCCCAGAGCTTTATTATTAGAAATTCTCAAGTTTTTCCTCAAATTTGTTATTACAGAGTTCGAATTCCATGGAACCCTCTCCTCTTCTGATGAAGCTGATTTTTTCATTTCTTCTTTGGCTGAGCTTTGTTCCACACTTCTTCGTCACTCGAGTTCATCTCTGCGGTTTGTGCTTTTCTAATTTCAATGCTTTTACTCCATTTCTGAGATTTTTTTTCTTTCCATTCTGAATCTTGGTTTTGTGGGTTAGATTAAATAGCTTGTGGCTCTGTTTTTTTGCTTATATTTCACTGTCAATCCACTTATAGTTGAGTAATATTTAATGATTGAAAGTCAATGTCAATGTACTGTTGAATATGTTTGTTTGTTTGTTTTTTTCCTCCAGGGTTTCAATCTCTTATTTTAAACATCATTTCGTTTCATCATTTCATTTTTCTATTCGTAGTTGCATTTCTGGTACTGTTAAAGGCACTGTTATTAACCCATCATTATTATAGAGCTTCATTTTGCAACACTTCTAACACCCTTCCATCTTTCACATCTCAACGACAATGATGTGCTTGAAGGTGAACAGTGTTGAATTTGACGGTGTTACGTATGTAACAGCCCAAGCTTACCGCTAATAAATATGGTCATTTTTTGACTTTACCTTTTAGGCTTCTCCTCGAGGTTTTTAAAATGCATCTGCTAGGGGAGGTTTTCACACTCTTATAAAAAATGTTTCGTTCTCCTCCTCAACCGACGTGAGATCTCACAATCCATCCATATTGTGAGATCCTACATTTGTTGGAAAGGGTAACGAAATGTTTTAAAAAATTTTAAAAACCTCAAGGGAAACTTGGGAAACTTGAAAGGAAAGCCCACCCAAGACAATATTATTTGATGTTATGTCAGATAATTAGATGGTAAATGAGAACTAAATAGCCTATGGAAGTTTACCTTTTTTTAATAGACCAGCTCAGCAAGGTTTTAAATGTCGACGTTGGCCTGAATGTTGAGACCTGAATTTAATAGAAATGTAGATAAAATGATGAACATATCATGAAAATTCATAAATAGCACTTGCATGGGCGTAAATTCGAATGTCTAACATCTTGATGACCGAGCTAGCTCTAGTTCATTAAGATTTAACCAATCACCACGGGGTCTATGGAAGTTTGCATTTTATTCTCTAACTTCGACTGAACTTTGCTCTGATGGAATGGAATTTTGTATTGATAATTGATTTTTGTTCTGCAACTGATGCAGATGAGACAGCTAAGTATGATATCATGGTGAAAGGAGTAGAAATATCTCCCAGCCCCATAGTTAGGGGTCACCCAACAAATATGACCTTAAATCTAATCATAGGTACATAATACCCCACTTAACCCTTTTCATCATCTTTATAGTTTTCTAAACATTCCATTTTTTTGACAAGTAGAAGCTGAAACTTAACTATGAATATCTCTTTTTAGGATTTGATGCAAATTTGCACATGTTTATATTAAACTTTTATTTAGCTGTTACTAGTTGCTCCATTGGTAAATTTAGTGGGCGCTTAACGTCAATAAAACAGGCACTGAACTGTTTTTCCTAGTAACAGGGCTGACATCTGCTACCTACTACCTTCCTTTCTTCTATGAATAATAATGAGTTCATGGGTTAGATTAACCTTTAGATTTGTCATCTTTTTTATGGATAAGCCAGATTAGAGGATACTTCTCTATCGCTTCTGTTTTACTTCTAACTAGCACCAACTGCCCTGTCTTTATTTGACCCTTGAGAGAGAAGGTATACCCCTTCCCCCTCGTGTAATTCTTGTTAGGTGTGAGATCCCACGTCTATTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATACGCGTTTTAAAAACCTTGAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGGCTTGGGCAGTTACATTAGGCATATGTCATCCTTTGAACCTTAGCTCGAACTTTGGCTAATGACAGCAATCTTGTACACGTGGCACAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGATATTTTATATTTCGGATGGCACGTATATAGTGACAGCTATGACATTTGTGTTGAGACGTCCTGCCCTTATACGTCTGGTGATTTTGCACTTGCCCCATTTCAAACGCCTCTGGCATTCTTTGTACCTGTAAGTTACTCAATTCATGTTTACCACTTGTGTTTATCTTTTTCTTGTAGTTTCTGGTTTTTTTTTTTTTCTCTTAATAAGTTAAAGGAACAAGGTTTTATCCTGGCTCAATTGATCTACAAAGTCTGTTCTTTTTATCTTGAAAGGATTAAAAGCATCGCTCTACCTTATGGAAGGGTTTTCTTGGTTTCATTTGTTCTCTTAATATTAAGTATTCCACTAGAACCTAATGGGAGTTCAAGTTAGCACAAATCTAATTATTGAAACTAGAACCTTATCTAAAGAGCTTCATGGTGACCTTATGTGAGATCCTACGTGGGTTAGAGAGGGAAACGAAACATTCCTTATAAGGGTGTAGAAACCTCTCTCTAGCATACGCGTTTTAAAAACTTTGAGGGGAAGCTCGGAAGGGAAAGTTCAAAGAGGACAATATCTACTAGCAGTGGACTTGAACTGTTACAAATGGTATCAAAGCCAAGTTCCGAGCAGTGTGTTAGTGAGGACGCTGAGTCTCCAAGGGGGTGGATTATGAGATCCCACATTAGTTGGAGATGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCTTAGCAGATGCATTTTAAAACCTTGAGGGGAAGCCTGAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGTGGGCTTGGGTTGTTACACCTTATTATCTAAAGTAACTAGGTTTTTTGGGATGAAAAACATATACACACACAATCATTGAATTCTTTTTCCTTTAACTATTATGCATTCTAACTATTTCCTTCTCCTTGCAGGGTTCATATCATATGCAGATAACCATTATTGATGGACATGATAATAAACTAACATGTTTTGGCTTTGATTATGAATTGGTGATTGCATCACTATTCGGACATAGCTAAGAGCTTTTATTTATTGATTACTCAGCTATTGATGTTTGTACATATAAACCCTTGTAAAGCTCTGTCATCTTTAGATCCTTGTTCGTTCCTTGGGCAGACAACTTTTGCACTATGACCATTTGAACAACTTATTCAGGAGAATTGAGTTGTGAAAATTGCCAAAAAAAAACTCGGGTTATTAGAGAGTACCATACTACTTATCGTCATTCTCACGTGGATTACTTTGTTTTTCGTAGATACAAAATGGAAAGAGTAACAATTAAGTTCTAAAATAAGTTGTACTATCTGAGCAAAGGTTCAAGTTTTTTCTTTATGCTTGCTTTAAT

mRNA sequence

CTAAAACCTTTTCAACAACGAGTATGCGTCTCTCGTGCCAATCCCTAAGGATTCCAAACGAAGTAGAACAAAGTAAATTCACAGATCAAGGGATAAAGAAAATGGATAGTCTTCATAGCTGCAAGATCCTAGAGTTCGAATTCCATGGAACCCTCTCCTCTTCTGATGAAGCTGATTTTTTCATTTCTTCTTTGGCTGAGCTTTGTTCCACACTTCTTCGTCACTCGAGTTCATCTCTGCGATGAGACAGCTAAGTATGATATCATGGTGAAAGGAGTAGAAATATCTCCCAGCCCCATAGTTAGGGGTCACCCAACAAATATGACCTTAAATCTAATCATAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGATATTTTATATTTCGGATGGCACGTATATAGTGACAGCTATGACATTTGTGTTGAGACGTCCTGCCCTTATACGTCTGGTGATTTTGCACTTGCCCCATTTCAAACGCCTCTGGCATTCTTTGTACCTGGTTCATATCATATGCAGATAACCATTATTGATGGACATGATAATAAACTAACATGTTTTGGCTTTGATTATGAATTGGTGATTGCATCACTATTCGGACATAGCTAAGAGCTTTTATTTATTGATTACTCAGCTATTGATGTTTGTACATATAAACCCTTGTAAAGCTCTGTCATCTTTAGATCCTTGTTCGTTCCTTGGGCAGACAACTTTTGCACTATGACCATTTGAACAACTTATTCAGGAGAATTGAGTTGTGAAAATTGCCAAAAAAAAACTCGGGTTATTAGAGAGTACCATACTACTTATCGTCATTCTCACGTGGATTACTTTGTTTTTCGTAGATACAAAATGGAAAGAGTAACAATTAAGTTCTAAAATAAGTTGTACTATCTGAGCAAAGGTTCAAGTTTTTTCTTTATGCTTGCTTTAAT

Coding sequence (CDS)

ATGGAACCCTCTCCTCTTCTGATGAAGCTGATTTTTTCATTTCTTCTTTGGCTGAGCTTTGTTCCACACTTCTTCGTCACTCGAGTTCATCTCTGCGATGAGACAGCTAAGTATGATATCATGGTGAAAGGAGTAGAAATATCTCCCAGCCCCATAGTTAGGGGTCACCCAACAAATATGACCTTAAATCTAATCATAGGTAAGCCAATCATTGCAGGAAAAATGGTAGTTGATATTTTATATTTCGGATGGCACGTATATAGTGACAGCTATGACATTTGTGTTGAGACGTCCTGCCCTTATACGTCTGGTGATTTTGCACTTGCCCCATTTCAAACGCCTCTGGCATTCTTTGTACCTGGTTCATATCATATGCAGATAACCATTATTGATGGACATGATAATAAACTAACATGTTTTGGCTTTGATTATGAATTGGTGATTGCATCACTATTCGGACATAGCTAA

Protein sequence

MEPSPLLMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVPGSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS

Homology

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BLAST of CmaCh06G005350 vs. ExPASy Swiss-Prot
Match: Q9AST8 (MD-2-related lipid-recognition protein ROSY1 OS=Arabidopsis thaliana OX=3702 GN=ROSY1 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.7e-04
Identity = 32/101 (31.68%), Postives = 46/101 (45.54%), Query Frame = 0


Query: 9   KLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLIIGK 68
           +L+   L+ L F P     +   CD   +Y + V  VEISP P+ R     +T+  +  K
Sbjct: 7   QLLLLLLVSLFFSPALCGPKFQTCDTGKEYPLKVSSVEISPDPVKRSGNGEITITGVTNK 66

Query: 69  PIIAGKMVVDILYFG-WHVYSDSYDICVETSCPYTSGDFAL 109
            I  G  V   L  G + V + SY +C  T+CP   G   L
Sbjct: 67  EISDGVTVNLKLAVGMFPVSTKSYSLCDITACPVAPGPIVL 107

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BLAST of CmaCh06G005350 vs. ExPASy TrEMBL
Match: A0A6J1KWB4 (uncharacterized protein LOC111498769 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111498769 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 5.5e-86
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MEPSPLLMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 60
           MEPSPLLMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPSPLLMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 60

Query: 61  TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 120
           TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP
Sbjct: 61  TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 120

Query: 121 GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 156
           GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS
Sbjct: 121 GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 155

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BLAST of CmaCh06G005350 vs. ExPASy TrEMBL
Match: A0A6J1FIH7 (uncharacterized protein LOC111445883 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445883 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.2e-82
Identity = 152/155 (98.06%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MEPSPLLMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 60
           MEPS LLMKLIFSFLLWLSFVP FF TRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPS-LLMKLIFSFLLWLSFVPQFFATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 60

Query: 61  TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 120
           TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP
Sbjct: 61  TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 120

Query: 121 GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 156
           GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS
Sbjct: 121 GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 154

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BLAST of CmaCh06G005350 vs. ExPASy TrEMBL
Match: A0A5D3DP69 (Putative phosphatidylglycerol/phosphatidylinositol transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004740 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.2e-68
Identity = 129/156 (82.69%), Postives = 137/156 (87.82%), Query Frame = 0


Query: 1   MEPSPLLMKLIFSFLLWLSFVPHF-FVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTN 60
           MEP+   MKLIF FLLWL F P F F TRV LCDETA+YDI VKGVEISPSPIVRGHPTN
Sbjct: 1   MEPT-FQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTN 60

Query: 61  MTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFV 120
           MT NL+IG PIIAGKMVVDI YFGWH+YSDS+DICVETSCPY SGDFAL P +TPLAFF+
Sbjct: 61  MTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFL 120

Query: 121 PGSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 156
           PGSYHMQITI+DG DNKLTCFGFDYELVIASLFG S
Sbjct: 121 PGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 155

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BLAST of CmaCh06G005350 vs. ExPASy TrEMBL
Match: A0A1S3B7M8 (uncharacterized protein LOC103486693 OS=Cucumis melo OX=3656 GN=LOC103486693 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.2e-68
Identity = 129/156 (82.69%), Postives = 137/156 (87.82%), Query Frame = 0


Query: 1   MEPSPLLMKLIFSFLLWLSFVPHF-FVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTN 60
           MEP+   MKLIF FLLWL F P F F TRV LCDETA+YDI VKGVEISPSPIVRGHPTN
Sbjct: 1   MEPT-FQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTN 60

Query: 61  MTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFV 120
           MT NL+IG PIIAGKMVVDI YFGWH+YSDS+DICVETSCPY SGDFAL P +TPLAFF+
Sbjct: 61  MTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFL 120

Query: 121 PGSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 156
           PGSYHMQITI+DG DNKLTCFGFDYELVIASLFG S
Sbjct: 121 PGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 155

[Close]

BLAST of CmaCh06G005350 vs. ExPASy TrEMBL
Match: A0A6J1J1A9 (uncharacterized protein LOC111481784 OS=Cucurbita maxima OX=3661 GN=LOC111481784 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.4e-65
Identity = 129/157 (82.17%), Postives = 136/157 (86.62%), Query Frame = 0


Query: 1   MEP-SPLLMKLIFSFLLWLSFVPHF-FVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPT 60
           MEP SP  MKLIF+ LLWL FV  F F TRV LCDETAKYDIMVKGV+ISPSPIVRG P 
Sbjct: 1   MEPTSP--MKLIFTLLLWLCFVLQFSFATRVQLCDETAKYDIMVKGVQISPSPIVRGRPI 60

Query: 61  NMTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFF 120
            MT NLIIGKPIIAGKMVVDI YFGWH+Y DS+DICVETSCPY+ GDFALAP QTPLAFF
Sbjct: 61  TMTFNLIIGKPIIAGKMVVDISYFGWHMYRDSHDICVETSCPYSFGDFALAPLQTPLAFF 120

Query: 121 VPGSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 156
           +PGSYHMQITI+DG DNKL CFGFDYELVIASLFG S
Sbjct: 121 LPGSYHMQITIVDGDDNKLACFGFDYELVIASLFGDS 155

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BLAST of CmaCh06G005350 vs. NCBI nr
Match: XP_023005906.1 (uncharacterized protein LOC111498769 isoform X2 [Cucurbita maxima])

HSP 1 Score: 326.6 bits (836), Expect = 1.1e-85
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MEPSPLLMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 60
           MEPSPLLMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPSPLLMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 60

Query: 61  TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 120
           TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP
Sbjct: 61  TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 120

Query: 121 GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 156
           GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS
Sbjct: 121 GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 155

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BLAST of CmaCh06G005350 vs. NCBI nr
Match: KAG6596628.1 (hypothetical protein SDJN03_09808, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316.2 bits (809), Expect = 1.5e-82
Identity = 150/155 (96.77%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MEPSPLLMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 60
           MEPS L++KLIFSFLLWLSFVP FF TRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPSLLMLKLIFSFLLWLSFVPQFFATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 60

Query: 61  TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 120
           TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP
Sbjct: 61  TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 120

Query: 121 GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 156
           GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS
Sbjct: 121 GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 155

[Close]

BLAST of CmaCh06G005350 vs. NCBI nr
Match: XP_022940446.1 (uncharacterized protein LOC111445883 isoform X2 [Cucurbita moschata])

HSP 1 Score: 314.7 bits (805), Expect = 4.5e-82
Identity = 152/155 (98.06%), Postives = 152/155 (98.06%), Query Frame = 0


Query: 1   MEPSPLLMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 60
           MEPS LLMKLIFSFLLWLSFVP FF TRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPS-LLMKLIFSFLLWLSFVPQFFATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 60

Query: 61  TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 120
           TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP
Sbjct: 61  TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 120

Query: 121 GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 156
           GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS
Sbjct: 121 GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 154

[Close]

BLAST of CmaCh06G005350 vs. NCBI nr
Match: XP_023538983.1 (uncharacterized protein LOC111799753 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.8 bits (800), Expect = 1.7e-81
Identity = 151/155 (97.42%), Postives = 151/155 (97.42%), Query Frame = 0


Query: 1   MEPSPLLMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 60
           MEPS LLMKLIFSFLLWLSFVP FF TRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM
Sbjct: 1   MEPS-LLMKLIFSFLLWLSFVPQFFATRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNM 60

Query: 61  TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 120
           TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP
Sbjct: 61  TLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVP 120

Query: 121 GSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 156
           GSYHMQITIIDGHDNKLTCFGFDYELVI SLFGHS
Sbjct: 121 GSYHMQITIIDGHDNKLTCFGFDYELVIESLFGHS 154

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BLAST of CmaCh06G005350 vs. NCBI nr
Match: XP_008442939.1 (PREDICTED: uncharacterized protein LOC103486693 [Cucumis melo] >TYK25335.1 putative phosphatidylglycerol/phosphatidylinositol transfer protein [Cucumis melo var. makuwa])

HSP 1 Score: 266.9 bits (681), Expect = 1.1e-67
Identity = 129/156 (82.69%), Postives = 137/156 (87.82%), Query Frame = 0


Query: 1   MEPSPLLMKLIFSFLLWLSFVPHF-FVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTN 60
           MEP+   MKLIF FLLWL F P F F TRV LCDETA+YDI VKGVEISPSPIVRGHPTN
Sbjct: 1   MEPT-FQMKLIFPFLLWLCFFPQFSFATRVQLCDETAEYDITVKGVEISPSPIVRGHPTN 60

Query: 61  MTLNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFV 120
           MT NL+IG PIIAGKMVVDI YFGWH+YSDS+DICVETSCPY SGDFAL P +TPLAFF+
Sbjct: 61  MTFNLLIGNPIIAGKMVVDISYFGWHIYSDSHDICVETSCPYLSGDFALPPLRTPLAFFL 120

Query: 121 PGSYHMQITIIDGHDNKLTCFGFDYELVIASLFGHS 156
           PGSYHMQITI+DG DNKLTCFGFDYELVIASLFG S
Sbjct: 121 PGSYHMQITIVDGDDNKLTCFGFDYELVIASLFGDS 155

[Close]

BLAST of CmaCh06G005350 vs. TAIR 10
Match: AT5G06480.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 5.2e-28
Identity = 56/140 (40.00%), Postives = 88/140 (62.86%), Query Frame = 0


Query: 7   LMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLII 66
           ++ L   FLL L  V       VH C+E A+Y++ VK V+ISP+PI  G P   T++   
Sbjct: 7   ILPLAAVFLLLL--VSPIVAIDVHYCEENAEYEVKVKEVDISPNPIAPGEPATFTISANT 66

Query: 67  GKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVPGSYHMQ 126
           G+ I  GK+V+++ YFGWHV+S+++D+C ETSCP  +GDF +A  Q    +  PGSY ++
Sbjct: 67  GREISFGKLVIEVSYFGWHVHSETHDLCTETSCPIQTGDFLVAHSQVLPGYTPPGSYLLK 126

Query: 127 ITIIDGHDNKLTCFGFDYEL 147
           + ++D    +LTC  F +++
Sbjct: 127 MKMLDAKKKELTCIKFSFDI 144

[Close]

BLAST of CmaCh06G005350 vs. TAIR 10
Match: AT3G11780.1 (MD-2-related lipid recognition domain-containing protein / ML domain-containing protein )

HSP 1 Score: 119.4 bits (298), Expect = 2.6e-27
Identity = 53/141 (37.59%), Postives = 86/141 (60.99%), Query Frame = 0


Query: 10  LIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLIIGKP 69
           L  S+ L +S +     T VH CD   +Y++ V+GV+I+P PI RG P    ++      
Sbjct: 10  LAISYFLLVSTI--VAATDVHYCDNNEEYEVKVQGVDITPYPIARGEPATFRISANTDTE 69

Query: 70  IIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVPGSYHMQITI 129
           I +GK+V+++ YFGWH++S+++D+C ETSCP   GDF +A  Q    +  PGSY +++ +
Sbjct: 70  ISSGKLVIEVSYFGWHIHSETHDLCDETSCPVAIGDFLVAHSQVLPGYTPPGSYSLKMKM 129

Query: 130 IDGHDNKLTCFGFDYELVIAS 151
           +DG   +LTC  F +++   S
Sbjct: 130 LDGRKKELTCIKFSFDIGFGS 148

[Close]

BLAST of CmaCh06G005350 vs. TAIR 10
Match: AT3G11780.2 (MD-2-related lipid recognition domain-containing protein / ML domain-containing protein )

HSP 1 Score: 111.7 bits (278), Expect = 5.3e-25
Identity = 56/159 (35.22%), Postives = 88/159 (55.35%), Query Frame = 0


Query: 10  LIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLIIGKP 69
           L  S+ L +S +     T VH CD   +Y++ V+GV+I+P PI RG P    ++      
Sbjct: 10  LAISYFLLVSTI--VAATDVHYCDNNEEYEVKVQGVDITPYPIARGEPATFRISANTDTE 69

Query: 70  IIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALA-----PFQTP---------- 129
           I +GK+V+++ YFGWH++S+++D+C ETSCP   GDF +A     P  TP          
Sbjct: 70  ISSGKLVIEVSYFGWHIHSETHDLCDETSCPVAIGDFLVAHSQVLPGYTPPTEKRFNLVS 129

Query: 130 ---LAFFVPGSYHMQITIIDGHDNKLTCFGFDYELVIAS 151
                F V GSY +++ ++DG   +LTC  F +++   S
Sbjct: 130 IAYYEFHVEGSYSLKMKMLDGRKKELTCIKFSFDIGFGS 166

[Close]

BLAST of CmaCh06G005350 vs. TAIR 10
Match: AT3G44100.1 (MD-2-related lipid recognition domain-containing protein )

HSP 1 Score: 94.7 bits (234), Expect = 6.8e-20
Identity = 50/149 (33.56%), Postives = 82/149 (55.03%), Query Frame = 0


Query: 2   EPSPLLMKLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMT 61
           +  PLL+ L+  F     F+P    T    CD+     + V GV+ISP P+V G      
Sbjct: 5   QAQPLLLLLLSVF-----FLPALHATSFTYCDKRLD-PVKVTGVKISPDPVVSGAAATFK 64

Query: 62  LNLIIGKPIIAGKMVVDILYFGWHVYSDSYDICVETSCPYTSGDFALAPFQTPLAFFVPG 121
           +    G+ I  GK+V+ +LY G  V+++++D+C ET+CP   G F L+  QT  +   PG
Sbjct: 65  IFGSTGEDISGGKVVIRVLYVGIPVHTETHDLCDETACPVAPGSFVLSHSQTLPSITPPG 124

Query: 122 SYHMQITIIDGHDNKLTCFGFDYELVIAS 151
           +Y +++TI D +  +LTC  F +++ + S
Sbjct: 125 TYTLKMTINDKNGGRLTCISFKFKITVGS 147

[Close]

BLAST of CmaCh06G005350 vs. TAIR 10
Match: AT2G16005.1 (MD-2-related lipid recognition domain-containing protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05
Identity = 32/101 (31.68%), Postives = 46/101 (45.54%), Query Frame = 0


Query: 9   KLIFSFLLWLSFVPHFFVTRVHLCDETAKYDIMVKGVEISPSPIVRGHPTNMTLNLIIGK 68
           +L+   L+ L F P     +   CD   +Y + V  VEISP P+ R     +T+  +  K
Sbjct: 7   QLLLLLLVSLFFSPALCGPKFQTCDTGKEYPLKVSSVEISPDPVKRSGNGEITITGVTNK 66

Query: 69  PIIAGKMVVDILYFG-WHVYSDSYDICVETSCPYTSGDFAL 109
            I  G  V   L  G + V + SY +C  T+CP   G   L
Sbjct: 67  EISDGVTVNLKLAVGMFPVSTKSYSLCDITACPVAPGPIVL 107

The following BLAST results are available for this feature:

BLAST of CmaCh06G005350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AST8	1.7e-04	31.68	MD-2-related lipid-recognition protein ROSY1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of CmaCh06G005350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KWB4	5.5e-86	100.00	uncharacterized protein LOC111498769 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FIH7	2.2e-82	98.06	uncharacterized protein LOC111445883 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3DP69	5.2e-68	82.69	Putative phosphatidylglycerol/phosphatidylinositol transfer protein OS=Cucumis m...	[more]
A0A1S3B7M8	5.2e-68	82.69	uncharacterized protein LOC103486693 OS=Cucumis melo OX=3656 GN=LOC103486693 PE=...	[more]
A0A6J1J1A9	1.4e-65	82.17	uncharacterized protein LOC111481784 OS=Cucurbita maxima OX=3661 GN=LOC111481784...	[more]

BLAST of CmaCh06G005350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023005906.1	1.1e-85	100.00	uncharacterized protein LOC111498769 isoform X2 [Cucurbita maxima]	[more]
KAG6596628.1	1.5e-82	96.77	hypothetical protein SDJN03_09808, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022940446.1	4.5e-82	98.06	uncharacterized protein LOC111445883 isoform X2 [Cucurbita moschata]	[more]
XP_023538983.1	1.7e-81	97.42	uncharacterized protein LOC111799753 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_008442939.1	1.1e-67	82.69	PREDICTED: uncharacterized protein LOC103486693 [Cucumis melo] >TYK25335.1 putat...	[more]

BLAST of CmaCh06G005350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06480.1	5.2e-28	40.00	Immunoglobulin E-set superfamily protein	[more]
AT3G11780.1	2.6e-27	37.59	MD-2-related lipid recognition domain-containing protein / ML domain-containing ...	[more]
AT3G11780.2	5.3e-25	35.22	MD-2-related lipid recognition domain-containing protein / ML domain-containing ...	[more]
AT3G44100.1	6.8e-20	33.56	MD-2-related lipid recognition domain-containing protein	[more]
AT2G16005.1	1.2e-05	31.68	MD-2-related lipid recognition domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003172	MD-2-related lipid-recognition domain	SMART	SM00737	pgtp_13	coord: 29..144 e-value: 6.2E-16 score: 68.9
IPR003172	MD-2-related lipid-recognition domain	PFAM	PF02221	E1_DerP2_DerF2	coord: 29..145 e-value: 4.6E-14 score: 53.0
None	No IPR available	GENE3D	2.60.40.770		coord: 28..149 e-value: 6.4E-8 score: 35.0
None	No IPR available	PANTHER	PTHR11306:SF0	OS07G0159800 PROTEIN	coord: 26..144
IPR039670	Sterol transport protein NPC2-like	PANTHER	PTHR11306	NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED	coord: 26..144
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 27..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G005350.1	CmaCh06G005350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding