CmaCh06G004200 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G004200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	PLATZ transcription factor family protein
Location	Cma_Chr06: 1939983 .. 1941246 (-)
RNA-Seq Expression	CmaCh06G004200
Synteny	CmaCh06G004200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGTCTCTTCAGCCTTGGCCTTTTCATTTTCGTTTCAATTCTCAGAAATTGGCATCGGTTTTCTCTCGTGAGAGAGAGCAGAGTTATGATAATAAGGCAAAAGATCACATTTTTTTGGGTACCCATTTGAGAATAAATATGGTAAGCCAAAAAAAAAACTCACATTATTCTCTGTTTTTCTTCGTTAAATTGATTCTTGGGTCTGTTCTTTCCAAAGATGAAGCAAAAATCAATGTCGGCGCCGCCGTGGTTGGAGCCATTGTTGAACACGGCGTTCTTCTCAATCTGCCACACGCACGGCGAATCCGCTAGGAGTGAGCGGAATATGTACTGTCTTGATTGCCACTGCGACGCATTTTGCTTCTATTGCCGCTCATCTCACCACAAGGATCATCAAGTAATTCAGGTTGGTTCAATCAAATTCTTAATTTGTTTTGGAAATTTCAAGACATGGGTTTTGTTAAGCATTGACTTAGATGAAATGGGTTGGTTTTGGAATTTGAAAATTTGTTTTAGATAAGAAGATCTTCGTATCATGATGTGGTAAGAGTGGCAGATATCGAAGAAGCCTTGGATATAAGTGGCGTTCAAACCTATGTGATTAATAGCGCCAGAGTCATGTTCTTGAACGAGAGGCCTCAACCCAAAGCTGGTAAAGGAGGAGCACATATTTGTGAAATTTGTGGGAGAAGCTTATTGGATCCATTTCGTTTCTGTTCACTCGGCTGTAAGGTTAGCCACCATTCCCTTTCCTTTTCGATTCCGGGTTGGATCAGATCGGATCATAACATAAACACGATAGATTAGAATGAAAATCGAAGATCGAAAAGTGGTTTATAATGTTAATTTGGGGAAAAAAAACATGGCGTTTTGTAGCTTGTAGGGATGAACAGAAATGGGGATGCCAGCTTTAGCTTGGAGACGAAGAAAGAGGCAATGGTAATGGAAAGAAGAGAAGGAATTTCATCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGGTCCTAATTATTGCCTTCCAAACCAATTCTTTGAAGCCTTTAATCATTTTACATGCCATAATTTGGGGTCATTGTCCATAAAAGTATAGGGCACTCCTTCATATTGATATGTCCTAAAAATAAATTTTTAAAAAAATATCAATTTTTTATTTTTATTTTTATTTTTATATAGGGTCCCATACACAACAAATTCTATCTCGAGGATGTGAAGAACCAATAATGGAGGAATTGTTATGTTGATAATTGCAAGGTGTAT

mRNA sequence

CTCGTCTCTTCAGCCTTGGCCTTTTCATTTTCGTTTCAATTCTCAGAAATTGGCATCGGTTTTCTCTCGTGAGAGAGAGCAGAGTTATGATAATAAGGCAAAAGATCACATTTTTTTGGGTACCCATTTGAGAATAAATATGATGAAGCAAAAATCAATGTCGGCGCCGCCGTGGTTGGAGCCATTGTTGAACACGGCGTTCTTCTCAATCTGCCACACGCACGGCGAATCCGCTAGGAGTGAGCGGAATATGTACTGTCTTGATTGCCACTGCGACGCATTTTGCTTCTATTGCCGCTCATCTCACCACAAGGATCATCAAGTAATTCAGATAAGAAGATCTTCGTATCATGATGTGGTAAGAGTGGCAGATATCGAAGAAGCCTTGGATATAAGTGGCGTTCAAACCTATGTGATTAATAGCGCCAGAGTCATGTTCTTGAACGAGAGGCCTCAACCCAAAGCTGGTAAAGGAGGAGCACATATTTGTGAAATTTGTGGGAGAAGCTTATTGGATCCATTTCGTTTCTGTTCACTCGGCTGTAAGCTTGTAGGGATGAACAGAAATGGGGATGCCAGCTTTAGCTTGGAGACGAAGAAAGAGGCAATGGTAATGGAAAGAAGAGAAGGAATTTCATCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGGTCCTAATTATTGCCTTCCAAACCAATTCTTTGAAGCCTTTAATCATTTTACATGCCATAATTTGGGGTCATTGTCCATAAAAGTATAGGGCACTCCTTCATATTGATATGTCCTAAAAATAAATTTTTAAAAAAATATCAATTTTTTATTTTTATTTTTATTTTTATATAGGGTCCCATACACAACAAATTCTATCTCGAGGATGTGAAGAACCAATAATGGAGGAATTGTTATGTTGATAATTGCAAGGTGTAT

Coding sequence (CDS)

ATGATGAAGCAAAAATCAATGTCGGCGCCGCCGTGGTTGGAGCCATTGTTGAACACGGCGTTCTTCTCAATCTGCCACACGCACGGCGAATCCGCTAGGAGTGAGCGGAATATGTACTGTCTTGATTGCCACTGCGACGCATTTTGCTTCTATTGCCGCTCATCTCACCACAAGGATCATCAAGTAATTCAGATAAGAAGATCTTCGTATCATGATGTGGTAAGAGTGGCAGATATCGAAGAAGCCTTGGATATAAGTGGCGTTCAAACCTATGTGATTAATAGCGCCAGAGTCATGTTCTTGAACGAGAGGCCTCAACCCAAAGCTGGTAAAGGAGGAGCACATATTTGTGAAATTTGTGGGAGAAGCTTATTGGATCCATTTCGTTTCTGTTCACTCGGCTGTAAGCTTGTAGGGATGAACAGAAATGGGGATGCCAGCTTTAGCTTGGAGACGAAGAAAGAGGCAATGGTAATGGAAAGAAGAGAAGGAATTTCATCAAGGAGAAGAAAAGGCATTCCTCATAGGGCACCTTTTGGGTCCTAA

Protein sequence

MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFGS

Homology

[Close]

BLAST of CmaCh06G004200 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 9.1e-29
Identity = 59/128 (46.09%), Postives = 85/128 (66.41%), Query Frame = 0


Query: 10  PPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQVIQIRRSS 69
           P WL+ L    FF  C  H  + ++ERN+ CLDC C + C +C  S H+ H+++Q+RR  
Sbjct: 6   PAWLDALYAEKFFVGCPYHETAKKNERNVCCLDC-CTSLCPHCVPS-HRFHRLLQVRRYV 65

Query: 70  YHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLDPFR 129
           YHDVVR+ D+++ +D S VQ Y INSA+V+F+ +RPQ +  KG  + C  C RSL +P+ 
Sbjct: 66  YHDVVRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFKGAGNYCTSCDRSLQEPYI 125

Query: 130 FCSLGCKL 138
            CSLGCK+
Sbjct: 126 HCSLGCKV 131

[Close]

BLAST of CmaCh06G004200 vs. ExPASy TrEMBL
Match: A0A6J1KYH1 (uncharacterized protein LOC111498296 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111498296 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 4.9e-102
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 60
           MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH
Sbjct: 1   MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 60

Query: 61  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120
           QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 121 GRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFG 180
           GRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFG
Sbjct: 121 GRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFG 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]

BLAST of CmaCh06G004200 vs. ExPASy TrEMBL
Match: A0A6J1GGT0 (uncharacterized protein LOC111454064 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454064 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 4.9e-102
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 60
           MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH
Sbjct: 1   MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 60

Query: 61  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120
           QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 121 GRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFG 180
           GRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFG
Sbjct: 121 GRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFG 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]

BLAST of CmaCh06G004200 vs. ExPASy TrEMBL
Match: A0A6J1CS33 (uncharacterized protein LOC111014242 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014242 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.4e-93
Identity = 167/182 (91.76%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MMKQKS-MSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKD 60
           MMKQKS MSAPPWLEPLL TAFFSICHTHG++ARSERNMYCLDCH DAFCFYCRSSHH D
Sbjct: 1   MMKQKSIMSAPPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHHND 60

Query: 61  HQVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEI 120
           HQVIQIRRSSYHDVVRVA+IE++LDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEI
Sbjct: 61  HQVIQIRRSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEI 120

Query: 121 CGRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPF 180
           CGRSLLDPFRFCSLGCKLVG+ RNGDA F LE KKEA+VMERREGISSRRRKGIPHRAPF
Sbjct: 121 CGRSLLDPFRFCSLGCKLVGVKRNGDARFDLEAKKEALVMERREGISSRRRKGIPHRAPF 180

Query: 181 GS 182
           GS
Sbjct: 181 GS 182

[Close]

BLAST of CmaCh06G004200 vs. ExPASy TrEMBL
Match: A0A6J1CU41 (uncharacterized protein LOC111014242 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014242 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 7.1e-93
Identity = 166/181 (91.71%), Postives = 173/181 (95.58%), Query Frame = 0


Query: 2   MKQKS-MSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 61
           MKQKS MSAPPWLEPLL TAFFSICHTHG++ARSERNMYCLDCH DAFCFYCRSSHH DH
Sbjct: 1   MKQKSIMSAPPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHHNDH 60

Query: 62  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 121
           QVIQIRRSSYHDVVRVA+IE++LDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 122 GRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFG 181
           GRSLLDPFRFCSLGCKLVG+ RNGDA F LE KKEA+VMERREGISSRRRKGIPHRAPFG
Sbjct: 121 GRSLLDPFRFCSLGCKLVGVKRNGDARFDLEAKKEALVMERREGISSRRRKGIPHRAPFG 180

[Close]

BLAST of CmaCh06G004200 vs. ExPASy TrEMBL
Match: A0A6J1CTQ1 (uncharacterized protein LOC111014242 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111014242 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.7e-91
Identity = 161/175 (92.00%), Postives = 168/175 (96.00%), Query Frame = 0


Query: 7   MSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQVIQIR 66
           MSAPPWLEPLL TAFFSICHTHG++ARSERNMYCLDCH DAFCFYCRSSHH DHQVIQIR
Sbjct: 5   MSAPPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHHNDHQVIQIR 64

Query: 67  RSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLD 126
           RSSYHDVVRVA+IE++LDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLD
Sbjct: 65  RSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLLD 124

Query: 127 PFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFGS 182
           PFRFCSLGCKLVG+ RNGDA F LE KKEA+VMERREGISSRRRKGIPHRAPFGS
Sbjct: 125 PFRFCSLGCKLVGVKRNGDARFDLEAKKEALVMERREGISSRRRKGIPHRAPFGS 179

[Close]

BLAST of CmaCh06G004200 vs. NCBI nr
Match: XP_022951161.1 (uncharacterized protein LOC111454064 isoform X1 [Cucurbita moschata] >XP_023005194.1 uncharacterized protein LOC111498296 isoform X1 [Cucurbita maxima] >XP_023540022.1 uncharacterized protein LOC111800522 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6596518.1 hypothetical protein SDJN03_09698, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 380.2 bits (975), Expect = 1.0e-101
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 60
           MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH
Sbjct: 1   MMKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 60

Query: 61  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120
           QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 121 GRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFG 180
           GRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFG
Sbjct: 121 GRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFG 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]

BLAST of CmaCh06G004200 vs. NCBI nr
Match: XP_023540023.1 (uncharacterized protein LOC111800522 isoform X2 [Cucurbita pepo subsp. pepo] >KAG7028054.1 hypothetical protein SDJN02_09234, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 378.6 bits (971), Expect = 2.9e-101
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 2   MKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQ 61
           MKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQ
Sbjct: 1   MKQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQ 60

Query: 62  VIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICG 121
           VIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICG
Sbjct: 61  VIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICG 120

Query: 122 RSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFGS 181
           RSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFGS
Sbjct: 121 RSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFGS 180

[Close]

BLAST of CmaCh06G004200 vs. NCBI nr
Match: XP_022144595.1 (uncharacterized protein LOC111014242 isoform X1 [Momordica charantia])

HSP 1 Score: 351.3 bits (900), Expect = 5.0e-93
Identity = 167/182 (91.76%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MMKQKS-MSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKD 60
           MMKQKS MSAPPWLEPLL TAFFSICHTHG++ARSERNMYCLDCH DAFCFYCRSSHH D
Sbjct: 1   MMKQKSIMSAPPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHHND 60

Query: 61  HQVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEI 120
           HQVIQIRRSSYHDVVRVA+IE++LDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEI
Sbjct: 61  HQVIQIRRSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEI 120

Query: 121 CGRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPF 180
           CGRSLLDPFRFCSLGCKLVG+ RNGDA F LE KKEA+VMERREGISSRRRKGIPHRAPF
Sbjct: 121 CGRSLLDPFRFCSLGCKLVGVKRNGDARFDLEAKKEALVMERREGISSRRRKGIPHRAPF 180

Query: 181 GS 182
           GS
Sbjct: 181 GS 182

[Close]

BLAST of CmaCh06G004200 vs. NCBI nr
Match: XP_022144597.1 (uncharacterized protein LOC111014242 isoform X2 [Momordica charantia])

HSP 1 Score: 349.7 bits (896), Expect = 1.5e-92
Identity = 166/181 (91.71%), Postives = 173/181 (95.58%), Query Frame = 0


Query: 2   MKQKS-MSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDH 61
           MKQKS MSAPPWLEPLL TAFFSICHTHG++ARSERNMYCLDCH DAFCFYCRSSHH DH
Sbjct: 1   MKQKSIMSAPPWLEPLLKTAFFSICHTHGDAARSERNMYCLDCHADAFCFYCRSSHHNDH 60

Query: 62  QVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 121
           QVIQIRRSSYHDVVRVA+IE++LDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC
Sbjct: 61  QVIQIRRSSYHDVVRVAEIEDSLDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEIC 120

Query: 122 GRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPFG 181
           GRSLLDPFRFCSLGCKLVG+ RNGDA F LE KKEA+VMERREGISSRRRKGIPHRAPFG
Sbjct: 121 GRSLLDPFRFCSLGCKLVGVKRNGDARFDLEAKKEALVMERREGISSRRRKGIPHRAPFG 180

[Close]

BLAST of CmaCh06G004200 vs. NCBI nr
Match: XP_038903534.1 (uncharacterized protein LOC120090101 isoform X1 [Benincasa hispida])

HSP 1 Score: 349.4 bits (895), Expect = 1.9e-92
Identity = 167/182 (91.76%), Postives = 174/182 (95.60%), Query Frame = 0


Query: 1   MMKQKS-MSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKD 60
           MMKQKS MSAPPWLEPLL T FFSICHTHG++ARSERNMYCLDCH DAFCFYCRSSHH D
Sbjct: 1   MMKQKSVMSAPPWLEPLLTTPFFSICHTHGDAARSERNMYCLDCHSDAFCFYCRSSHHND 60

Query: 61  HQVIQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEI 120
           HQVIQIRRSSYHDVVRVA+IE+ALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEI
Sbjct: 61  HQVIQIRRSSYHDVVRVAEIEDALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEI 120

Query: 121 CGRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISSRRRKGIPHRAPF 180
           CGRSLLDPFRFCSLGCKLVG+ RNGDASF+LE KKEAM +ERREGISSRRRKGIPHRAPF
Sbjct: 121 CGRSLLDPFRFCSLGCKLVGVKRNGDASFNLEAKKEAMGIERREGISSRRRKGIPHRAPF 180

Query: 181 GS 182
           GS
Sbjct: 181 GS 182

[Close]

BLAST of CmaCh06G004200 vs. TAIR 10
Match: AT2G27930.1 (PLATZ transcription factor family protein )

HSP 1 Score: 218.0 bits (554), Expect = 6.2e-57
Identity = 115/195 (58.97%), Postives = 132/195 (67.69%), Query Frame = 0


Query: 7   MSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQVIQIR 66
           M  P WLE LL T FFSIC  H E+ R+E NM+CL C   AFCFYCRSS H DH V+QIR
Sbjct: 1   MEEPKWLEGLLRTNFFSICPRHRETPRNECNMFCLSCQNAAFCFYCRSSFHIDHPVLQIR 60

Query: 67  RSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGA---------HIC 126
           RSSYHDVVRV++IE ALDI GVQTYVINSARV+FLNERPQPK    GA         + C
Sbjct: 61  RSSYHDVVRVSEIENALDIRGVQTYVINSARVLFLNERPQPKNSSHGAASSTPKTMSYFC 120

Query: 127 EICGRSLLDPFRFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGI-----------S 182
           E C R+LLDPFRFCSLGCK+ GM +N       E ++E +  ER++             +
Sbjct: 121 ETCCRTLLDPFRFCSLGCKVEGMRKN------KEEEEERLRKERQQETHKGTHPPTHTSN 180

[Close]

BLAST of CmaCh06G004200 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 191.4 bits (485), Expect = 6.2e-49
Identity = 102/204 (50.00%), Postives = 131/204 (64.22%), Query Frame = 0


Query: 3   KQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQV 62
           ++ + + P WL+PLL   FF  C  H +S +SE NMYCLDC     C  C  S HKDH  
Sbjct: 5   EETNKTYPHWLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLC-LSFHKDHHA 64

Query: 63  IQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGR 122
           IQIRRSSYHDV+RV++I++ LDI+GVQTYVINSA+V+FLNERPQP+ GKG  + CE+C R
Sbjct: 65  IQIRRSSYHDVIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQPRPGKGVINTCEVCYR 124

Query: 123 SLLDPFRFCSLGCKLVGMNR-----------NGDASFSLET----KKEAMVMERREGIS- 181
           SL+D FRFCSLGCK+ G+++           + D S+S  +    KK   +M      S 
Sbjct: 125 SLVDSFRFCSLGCKISGISKKKRKEWTNNLSDSDDSYSSTSIGRLKKNDDIMNNSFTPST 184

[Close]

BLAST of CmaCh06G004200 vs. TAIR 10
Match: AT4G17900.1 (PLATZ transcription factor family protein )

HSP 1 Score: 191.0 bits (484), Expect = 8.1e-49
Identity = 100/201 (49.75%), Postives = 125/201 (62.19%), Query Frame = 0


Query: 10  PPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQVIQIRRSS 69
           PPWL+PLL   FF  C  HG+S +SE NMYCLDC     C  C  +HHKDH+ IQIRRSS
Sbjct: 34  PPWLKPLLKEQFFVHCKFHGDSHKSECNMYCLDCTNGPLCSLC-LAHHKDHRTIQIRRSS 93

Query: 70  YHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLL-DPF 129
           YHDV+RV +I++ LDI G+QTYVINSA+V+FLNERPQP+ GKG  + C++C RSL+ D F
Sbjct: 94  YHDVIRVNEIQKYLDIGGIQTYVINSAKVVFLNERPQPRPGKGVTNTCKVCYRSLVDDSF 153

Query: 130 RFCSLGCKLVGMNRNGDASFSLETKKEAMVMERREGISS--------------------- 181
           RFCSLGCK+ G +R        E  +E ++ME  +  SS                     
Sbjct: 154 RFCSLGCKIAGTSR------GFEKGRENLLMETEDSSSSIAIGKNITNLQSFSPSTPPLT 213

[Close]

BLAST of CmaCh06G004200 vs. TAIR 10
Match: AT1G76590.1 (PLATZ transcription factor family protein )

HSP 1 Score: 189.1 bits (479), Expect = 3.1e-48
Identity = 88/148 (59.46%), Postives = 113/148 (76.35%), Query Frame = 0


Query: 6   SMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQVIQI 65
           +++ PPWL P+L   +F  C  H  S +SE NM+CLDC  +AFC YC   +H++H+V+QI
Sbjct: 14  NLNPPPWLIPMLRANYFIPCSIHAASNKSECNMFCLDCSSEAFCSYC-LLNHRNHRVLQI 73

Query: 66  RRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGRSLL 125
           RRSSYH+VVRV +I++ +DIS VQTY+INSAR++FLNERPQP+ GKG  + CEIC RSLL
Sbjct: 74  RRSSYHNVVRVNEIQKYIDISCVQTYIINSARIVFLNERPQPRIGKGVTNTCEICCRSLL 133

Query: 126 DPFRFCSLGCKLVGMNRNGDASFSLETK 154
           D FRFCSLGCKL GM R+   +FSL  K
Sbjct: 134 DSFRFCSLGCKLGGMKRDPSLTFSLRGK 160

[Close]

BLAST of CmaCh06G004200 vs. TAIR 10
Match: AT1G21000.1 (PLATZ transcription factor family protein )

HSP 1 Score: 184.9 bits (468), Expect = 5.8e-47
Identity = 86/151 (56.95%), Postives = 115/151 (76.16%), Query Frame = 0


Query: 3   KQKSMSAPPWLEPLLNTAFFSICHTHGESARSERNMYCLDCHCDAFCFYCRSSHHKDHQV 62
           +++  ++PPWL P+L  ++F  C  H +S ++E N++CLDC  +AFC YC    HKDH+V
Sbjct: 9   EEEDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLVK-HKDHRV 68

Query: 63  IQIRRSSYHDVVRVADIEEALDISGVQTYVINSARVMFLNERPQPKAGKGGAHICEICGR 122
           +QIRRSSYH+VVRV +I++ +DI+ VQTY+INSA+++FLNERPQP+ GKG  + CEIC R
Sbjct: 69  VQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTNTCEICCR 128

Query: 123 SLLDPFRFCSLGCKLVGMNRNGDASFSLETK 154
           SLLD FRFCSLGCKL GM R GD S +   K
Sbjct: 129 SLLDSFRFCSLGCKLGGM-RRGDLSLTFSLK 157

The following BLAST results are available for this feature:

BLAST of CmaCh06G004200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	9.1e-29	46.09	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CmaCh06G004200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KYH1	4.9e-102	100.00	uncharacterized protein LOC111498296 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GGT0	4.9e-102	100.00	uncharacterized protein LOC111454064 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1CS33	2.4e-93	91.76	uncharacterized protein LOC111014242 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CU41	7.1e-93	91.71	uncharacterized protein LOC111014242 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CTQ1	1.7e-91	92.00	uncharacterized protein LOC111014242 isoform X3 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CmaCh06G004200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951161.1	1.0e-101	100.00	uncharacterized protein LOC111454064 isoform X1 [Cucurbita moschata] >XP_0230051...	[more]
XP_023540023.1	2.9e-101	100.00	uncharacterized protein LOC111800522 isoform X2 [Cucurbita pepo subsp. pepo] >KA...	[more]
XP_022144595.1	5.0e-93	91.76	uncharacterized protein LOC111014242 isoform X1 [Momordica charantia]	[more]
XP_022144597.1	1.5e-92	91.71	uncharacterized protein LOC111014242 isoform X2 [Momordica charantia]	[more]
XP_038903534.1	1.9e-92	91.76	uncharacterized protein LOC120090101 isoform X1 [Benincasa hispida]	[more]

BLAST of CmaCh06G004200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G27930.1	6.2e-57	58.97	PLATZ transcription factor family protein	[more]
AT1G32700.1	6.2e-49	50.00	PLATZ transcription factor family protein	[more]
AT4G17900.1	8.1e-49	49.75	PLATZ transcription factor family protein	[more]
AT1G76590.1	3.1e-48	59.46	PLATZ transcription factor family protein	[more]
AT1G21000.1	5.8e-47	56.95	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 66..137 e-value: 4.2E-29 score: 101.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..181
None	No IPR available	PANTHER	PTHR31065:SF43	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 7..169
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 7..169

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G004200.1	CmaCh06G004200.1	mRNA