CmaCh06G002950 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAAGGGGGGAAGAACTAGAAGGAGAGGAGACTGGAAGGTGGGGTGGGGCAGCGATGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGAGAAGATAACGAGACGTAACGCATCACTGACGAAGTTGCGGGGAGAGGGAAGGACGACTGCAGCAGCCGCAGAGGAAGGAAGGTCGAGTCTCCATCAAACTCCGTCACCTCGGGCCGCGAAACCCGGACTACAGTCCACCCTCTCAAACATCCTCACCCACTGCATTTCAGTTTCTCTTTCTAGGGTTCCTCTTTTTTGACGTCAGAGCTTTAGAATTCGCACTTTTGGAGGCCCACCGGTGAACGATTGTCTTCTTCTTCCCACTCTGACTCCGCCCTGATGGACGCTCAGGTTCGTCTCTAGGTTAAACCCTTCTACTTCTTTTAGCTTCTTAAGCTTTAGCCCTACCTGCCTGCCTCATTCACTCTGCTCCGATTCACGTTTCCATGTTGGATTATTCAAATTTGGATCATAATAAGCTTTAGAAATGATTTGAATCTTGAACTATGCTCATTGCTTGTCTCATTCCATGTGGAAATTTAAGTTTTAGTTTCAATAATATTCAATTATCGAAACATCCCATCATCTATTTGATCTTTATTACTATTCTTGCGTAGAAATACATGAATTATTCTCTGGTCCTTTTAATGTGCTCTAAGAAACTTGTATAGAATTAGACAGTGTGTAAAGGAGAGAAGAAAAAAACAGTAGAATCTTTGTGTTTCTGGTATTAGTATGTTCAAATTCAAAAGCTGAAAACGTTTGTGTACCAGACTGGTTAAAGGCATATAGTTTGCTAAGGTTCAAATTCTTATTTGATCTAAGCGTGAAAGATTTGAAGGTTAAGCGCTGAAACCTCTTGGCAGCATTAAATGCCAAGCAACACCCACTCTCTTACCCTTTCTCTCTCTCTGCAGCTCTGATCCTCAGCTGTTTCGCTCTGTCTCAATCGTCCCCTCTGGCTTTATACATATATATGGAACAGTGACTAAACGAGAGCTAATGCTGCTGTGGCTGTGCCTCAGTGGAACACCCACTGCTAGCCCTTTCCCTCTCTTCTTTGGCCTCTTTCTCAGCCCCCTTCTCTCTCTCTTCCTTATATTTCTTCCTTTTCTCTTCACATTCGCCTTTTCCAATTCCATTATCCTCCATCCTTCAATTCTCTCTCCCTTTTGTGGCTTCTACAGAACTGGGTTTCTGCCCTTTGTTCCTTTTCTCTCTTTGTTTCCACTGAATTGGTTCTGTTTTGCTGAGGAGGCTCGTACTTACCACTATCAGTGTATGCACTCATCTCTCTTTTGGCTTTTCATATTTCTTGTGTCTGTTTTCTTGTTCGATGTGTTCTTTAAGGACTTTGAGTGCAGTCCCTTGTGAGAAAAGAGTTCTGATGGCTATGTGATGATGCCTTTAATCCTTTTTTTCTTCTGCTATCTCTGTTGCTTCGAAGAATGGGAATTCTGGGTCGCTTTCCTTGTTTAATTCTGCTAAGTTTTGCTGAATTTTCTTGGATGAAGGGCAGTTTTTGGGGTAATGTTCAAACGGGTTTGGTTTGTTGAACCTTTTAAAGAAGTTCCATTTGTATTACTTTTTTATATATGCCTACTTGTATGAAATGATTTCCTTGTGGATGCTTATTATCTTCTTTTTGTTCTCTGTTTGAGTTCATGGGCAATTTCCAGCGTTGCAAATTCCCAGATTCTTCCTGTTCTTATGACTGTTTATGTCTGATTTCTTGTTTGGTTGAGGTTTATATGTTCAGGCATTTATGAAGAACTTTGAGATTTGACGTCAGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGTAAACCTCTTTTGAGTAGACTTATTTTAAAAACCTTGAGGTGAAGCCCGAAAAGGACATATCTGCTAAGCTGTTACAAATATTATCACTCCGATGTGCCTGCGAAAGTCGTTAGGCCTCCAAGTGGGGTGGATTATGAGATCCTACCCCAGTTAGAGAGGAGAACAAAAAACATTCCCTATAAGGATGTGGAAACTTCTCCCTAGTACACACATTTTAAAACCTTGAGGGAAAGTTCAGAAAGAAAAGTCTAAAGGGGACAATATTTGTAGATGGTGTGGTTGAGCTGTTACATAAACCATGTTTTGTTGCTGTTTGTTGTTTGATTGTCAGTTGTCCTTAAATTTGTTGCCATTTTAACATCTTCTTATGATATTTATGACATCTTGAAATCCTTTCAGAGATGCTGTGAAGTAGTAAGCTTTGTAAGTCCTATAAATGATGCACATACAAAATATTGGTTAGTTCTTGGAGGTTTGAACTCAACACTGAGTACAGAGATGCTCTATATTTGTGAAGGAATAGAATAGAAATCTTACTTTGAACCTTACCTCATGGCCACTTCCAATGGAGGCTTTCTTCAAACTGATTCATCAACGCCACCACCATCTCTTCCTCCATGGCTTTCAAACTCCAACAGCAGCTCATCGCTCCGACCGCCTTCCCCGTCCGTCACCTTAACACTCTCTTCCCCAACAGTTCCAGCCTACTCTCCAATCCCCTGGCTGCAGCAGCCAGAGAGAATCCCAGAAACCATGCCTCTTGTGTTAGGCAACATAGCACCTCAAATGACCATGCCATCATGTGGTGGAAGCCTCTTCGCTTCAGAGCTCGTCGAATGCTGCCGAGAGCTCGATGAGGGCCACCGTGCTTGGGCATCGCACAAGAAGGAAACGGCATGGAGGTTAAGGAGACAGGAGTTGCAATTGGAATCAGAGAAGGCGTCCCGAATTCGACAAAAGATGGAGGAGGTTGAAGGGAAAGTGAAGGCTGTTAGAGAAGAAGAGAAGATTGCTTTGGAGAGGATTGAAGCTGAGTATAAGGAGCAATTGGCTGGGTTGAGGAAAGATGCAGAGGCCAAAGAACAGAAGTTAGCTGAGCAATGGGCTGCAAAACACTTGAGCCTCACTAAGTTTCTTGAACACATGGGTTGCAGAACTAAAATTTCAGAGTCCAGTGGGAGGTGAGAAACCAAAAGTTTTGGAATTGGCTTTGAATTTCTTCATGGGAAATCCCTCCTTTTATATCTATTGACATCTCAAGTCATGCATCAATGTCCTATATTTGCTTTGTAATCAGAAGTTTGTTGTAATGAATTCTTGCTCGAGTAGCAACGACTTTGATAGGACATCATGTGAGCTCTCACAATCGAATACGAGTTATTATTAGAGTAAATACTCGCAGCATTGTGTGACTAATAATAGGGTACCCATTGGGTAGTATGAGCCATTTTTCAAGTTTAATATTTACTTTGTATCGTTATGTTGTTTTAAAGACTTTTTGAAAGCCCATGACAGTGTTCTAAGATGATGTTTTAAATGCTTATTTTCGGGAGAGAATGGTATAAAGATAGTAACGATTATCTGAAGTTAAATTTTAATATTATTAAAGAGAAAAAGAGAGATAAATTGAGGGACACGTGAAATGGGCCTGGCCTGTTAGGAACGAAATATGAAGTTTATTATTACTATTTTAAATTTATTTAAAGAACAATAGTTACGCAACCGTAGAAGATACAATCAACTACTTCCCGGGGTTCTGCATTTTTCGTTCTTAATTTCAACCATTTTGGACGTTTTTCATACGTATTACTTTCCTTCATCGATGAGCTTTCTGTGGACGATGTGTATTTTTCTCTACGTTGATCGTGATTCAGAAATTTGGCTGGGGTGAGGGGATAAACAAGATAAATTTCAGTGTGAAATTCACTGATCGATGATTGATTGAATGATTGAGACCGAGGATTGAATTTTGGAGTTTCAGAATTCCTATCTAGTAGTTGTTGACTAGAGTTGAAACCTGGGGAGAGAAACCTCTCGGCTACGGCGCTGTTTTTGTTTCGGTGACTGGCTGGTGCCGTATTGGCGCTACTGGAGAATGGACAATATGGATACATGTTCGCCTTCTGAATCTGCTCCACTTAAGCCTCGTGATCGAATAGTGCTGGTATGCGATTCTGTTTTCCTGTTTTCGATTTGTACATTGCATTTCGTATTCGGTGTTGATTTAGATAGGGATCGTTCTTTTGAATCATCCCTTGTACTTTGCTTTTGCTCATCTTGCAAGCAGTATGTGTTGGTGTTACTTTGCTTTTCCCCACCCTGCAAGCAGTAGCTGTTGATGTTCTTCTTCCTGGAAATGGATGTATTGGTCCTTAGTTTGTAAATGAGTTTATCCTTTTCTATAAATCGGAGTTTCTGTTCAATTTCGACTTGGAAAGGAGATGGGGATTCTAGTCCCGCTAGTATCTCGATCAGTTTTGCTTATCATCTCTGTTTACTTCTTCATAATTCTGATTCCTTTGTTTGTCAGCGGCTTGCTGTACTTGGAGTTCCTGATGAGCTATTGGATCAGCTTCAACCTGGTTTAGTTTCTTTTGTCAAGGACAACAAGTATCTGATACCGCAGATGGTATCTGTAATTTTGCCTACTGATGTAGAAGTGGTAAAAGCTATACGAGAAGCGAAAGCAGGGTCCAAAAAATCTGTGACGGGCCCAACCATGAAAAATCAATTCCGTGAGAGCATGACGTGGTTACAGTGGTTGATGTTTGAAGGTGAACCAGCTTCTGCTCTGAAGAACCTGTAA ATGGGAAAGGGGGGAAGAACTAGAAGGAGAGGAGACTGGAAGGTGGGGTGGGGCAGCGATGGGTTGCGGGGAGAGGGAAGGACGACTGCAGCAGCCGCAGAGGAAGGAAGGTCGAGTCTCCATCAAACTCCGTCACCTCGGGCCGCGAAACCCGGACTACAGTCCACCCTCTCAAACATCCTCACCCACTGCATTTCAGTTTCTCTTTCTAGGAATTCGCACTTTTGGAGGCCCACCGGTGAACGATTGTCTTCTTCTTCCCACTCTGACTCCGCCCTGATGGACGCTCAGAAATCTTACTTTGAACCTTACCTCATGGCCACTTCCAATGGAGGCTTTCTTCAAACTGATTCATCAACGCCACCACCATCTCTTCCTCCATGGCTTTCAAACTCCAACAGCAGCTCATCGCTCCGACCGCCTTCCCCGTCCGTCACCTTAACACTCTCTTCCCCAACAGTTCCAGCCTACTCTCCAATCCCCTGGCTGCAGCAGCCAGAGAGAATCCCAGAAACCATGCCTCTTGTGTTAGGCAACATAGCACCTCAAATGACCATGCCATCATGTGGTGGAAGCCTCTTCGCTTCAGAGCTCGTCGAATGCTGCCGAGAGCTCGATGAGGGCCACCGTGCTTGGGCATCGCACAAGAAGGAAACGGCATGGAGGTTAAGGAGACAGGAGTTGCAATTGGAATCAGAGAAGGCGTCCCGAATTCGACAAAAGATGGAGGAGGTTGAAGGGAAAGTGAAGGCTGTTAGAGAAGAAGAGAAGATTGCTTTGGAGAGGATTGAAGCTGAGTATAAGGAGCAATTGGCTGGGTTGAGGAAAGATGCAGAGGCCAAAGAACAGAAGTTAGCTGAGCAATGGGCTGCAAAACACTTGAGCCTCACTAAGTTTCTTGAACACATGGGTTGCAGAACTAAAATTTCAGAGTCCAGTGGGAGAGTTGAAACCTGGGGAGAGAAACCTCTCGGCTACGGCGCTGTTTTTGTTTCGGTGACTGGCTGGTGCCGTATTGGCGCTACTGGAGAATGGACAATATGGATACATCGGCTTGCTGTACTTGGAGTTCCTGATGAGCTATTGGATCAGCTTCAACCTGGTTTAGTTTCTTTTGTCAAGGACAACAAGTATCTGATACCGCAGATGGTATCTGTAATTTTGCCTACTGATGTAGAAGTGGTAAAAGCTATACGAGAAGCGAAAGCAGGGTCCAAAAAATCTGTGACGGGCCCAACCATGAAAAATCAATTCCGTGAGAGCATGACGTGGTTACAGTGGTTGATGTTTGAAGGTGAACCAGCTTCTGCTCTGAAGAACCTGTAA ATGGGAAAGGGGGGAAGAACTAGAAGGAGAGGAGACTGGAAGGTGGGGTGGGGCAGCGATGGGTTGCGGGGAGAGGGAAGGACGACTGCAGCAGCCGCAGAGGAAGGAAGGTCGAGTCTCCATCAAACTCCGTCACCTCGGGCCGCGAAACCCGGACTACAGTCCACCCTCTCAAACATCCTCACCCACTGCATTTCAGTTTCTCTTTCTAGGAATTCGCACTTTTGGAGGCCCACCGGTGAACGATTGTCTTCTTCTTCCCACTCTGACTCCGCCCTGATGGACGCTCAGAAATCTTACTTTGAACCTTACCTCATGGCCACTTCCAATGGAGGCTTTCTTCAAACTGATTCATCAACGCCACCACCATCTCTTCCTCCATGGCTTTCAAACTCCAACAGCAGCTCATCGCTCCGACCGCCTTCCCCGTCCGTCACCTTAACACTCTCTTCCCCAACAGTTCCAGCCTACTCTCCAATCCCCTGGCTGCAGCAGCCAGAGAGAATCCCAGAAACCATGCCTCTTGTGTTAGGCAACATAGCACCTCAAATGACCATGCCATCATGTGGTGGAAGCCTCTTCGCTTCAGAGCTCGTCGAATGCTGCCGAGAGCTCGATGAGGGCCACCGTGCTTGGGCATCGCACAAGAAGGAAACGGCATGGAGGTTAAGGAGACAGGAGTTGCAATTGGAATCAGAGAAGGCGTCCCGAATTCGACAAAAGATGGAGGAGGTTGAAGGGAAAGTGAAGGCTGTTAGAGAAGAAGAGAAGATTGCTTTGGAGAGGATTGAAGCTGAGTATAAGGAGCAATTGGCTGGGTTGAGGAAAGATGCAGAGGCCAAAGAACAGAAGTTAGCTGAGCAATGGGCTGCAAAACACTTGAGCCTCACTAAGTTTCTTGAACACATGGGTTGCAGAACTAAAATTTCAGAGTCCAGTGGGAGAGTTGAAACCTGGGGAGAGAAACCTCTCGGCTACGGCGCTGTTTTTGTTTCGGTGACTGGCTGGTGCCGTATTGGCGCTACTGGAGAATGGACAATATGGATACATCGGCTTGCTGTACTTGGAGTTCCTGATGAGCTATTGGATCAGCTTCAACCTGGTTTAGTTTCTTTTGTCAAGGACAACAAGTATCTGATACCGCAGATGGTATCTGTAATTTTGCCTACTGATGTAGAAGTGGTAAAAGCTATACGAGAAGCGAAAGCAGGGTCCAAAAAATCTGTGACGGGCCCAACCATGAAAAATCAATTCCGTGAGAGCATGACGTGGTTACAGTGGTTGATGTTTGAAGGTGAACCAGCTTCTGCTCTGAAGAACCTGTAA MGKGGRTRRRGDWKVGWGSDGLRGEGRTTAAAAEEGRSSLHQTPSPRAAKPGLQSTLSNILTHCISVSLSRNSHFWRPTGERLSSSSHSDSALMDAQKSYFEPYLMATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQPERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRRQELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKLAEQWAAKHLSLTKFLEHMGCRTKISESSGRVETWGEKPLGYGAVFVSVTGWCRIGATGEWTIWIHRLAVLGVPDELLDQLQPGLVSFVKDNKYLIPQMVSVILPTDVEVVKAIREAKAGSKKSVTGPTMKNQFRESMTWLQWLMFEGEPASALKNL Homology
BLAST of CmaCh06G002950 vs. ExPASy Swiss-Prot
Match: O80931 (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.5e-56 Identity = 133/215 (61.86%), Postives = 162/215 (75.35%), Query Frame = 0
BLAST of CmaCh06G002950 vs. ExPASy Swiss-Prot
Match: Q94IB1 (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 9.0e-38 Identity = 96/188 (51.06%), Postives = 126/188 (67.02%), Query Frame = 0
BLAST of CmaCh06G002950 vs. ExPASy Swiss-Prot
Match: Q9S7B2 (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 7.3e-32 Identity = 89/199 (44.72%), Postives = 121/199 (60.80%), Query Frame = 0
BLAST of CmaCh06G002950 vs. ExPASy Swiss-Prot
Match: F4KCC2 (E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana OX=3702 GN=PRT6 PE=1 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.6e-15 Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 0
BLAST of CmaCh06G002950 vs. ExPASy TrEMBL
Match: A0A6J1I2B9 (transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111470250 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 6.5e-108 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CmaCh06G002950 vs. ExPASy TrEMBL
Match: A0A6J1G8P0 (transcription factor AS1-like OS=Cucurbita moschata OX=3662 GN=LOC111451947 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 6.5e-108 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CmaCh06G002950 vs. ExPASy TrEMBL
Match: A0A5D3DN74 (Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001650 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 4.1e-102 Identity = 195/210 (92.86%), Postives = 206/210 (98.10%), Query Frame = 0
BLAST of CmaCh06G002950 vs. ExPASy TrEMBL
Match: A0A1S3B5G1 (transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 4.1e-102 Identity = 195/210 (92.86%), Postives = 206/210 (98.10%), Query Frame = 0
BLAST of CmaCh06G002950 vs. ExPASy TrEMBL
Match: A0A0A0LAJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734210 PE=4 SV=1) HSP 1 Score: 377.5 bits (968), Expect = 7.7e-101 Identity = 194/210 (92.38%), Postives = 204/210 (97.14%), Query Frame = 0
BLAST of CmaCh06G002950 vs. NCBI nr
Match: KAG6596407.1 (E3 ubiquitin-protein ligase PRT6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 593.2 bits (1528), Expect = 1.8e-165 Identity = 317/358 (88.55%), Postives = 320/358 (89.39%), Query Frame = 0
BLAST of CmaCh06G002950 vs. NCBI nr
Match: KAG7027949.1 (Transcription factor AS1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 422.2 bits (1084), Expect = 5.6e-114 Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of CmaCh06G002950 vs. NCBI nr
Match: XP_022948252.1 (transcription factor AS1-like [Cucurbita moschata] >XP_022948253.1 transcription factor AS1-like [Cucurbita moschata] >XP_022971572.1 transcription factor AS1-like [Cucurbita maxima] >XP_022971573.1 transcription factor AS1-like [Cucurbita maxima] >XP_023540705.1 transcription factor AS1-like [Cucurbita pepo subsp. pepo] >XP_023540706.1 transcription factor AS1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 401.0 bits (1029), Expect = 1.3e-107 Identity = 210/210 (100.00%), Postives = 210/210 (100.00%), Query Frame = 0
BLAST of CmaCh06G002950 vs. NCBI nr
Match: XP_038903104.1 (transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription factor AS1-like [Benincasa hispida]) HSP 1 Score: 387.1 bits (993), Expect = 2.0e-103 Identity = 200/210 (95.24%), Postives = 207/210 (98.57%), Query Frame = 0
BLAST of CmaCh06G002950 vs. NCBI nr
Match: XP_008442545.1 (PREDICTED: transcription factor AS1 [Cucumis melo] >KAA0044093.1 transcription factor AS1 [Cucumis melo var. makuwa] >TYK25044.1 transcription factor AS1 [Cucumis melo var. makuwa]) HSP 1 Score: 381.7 bits (979), Expect = 8.5e-102 Identity = 195/210 (92.86%), Postives = 206/210 (98.10%), Query Frame = 0
BLAST of CmaCh06G002950 vs. TAIR 10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 221.9 bits (564), Expect = 1.0e-57 Identity = 133/215 (61.86%), Postives = 162/215 (75.35%), Query Frame = 0
BLAST of CmaCh06G002950 vs. TAIR 10
Match: AT5G02310.1 (proteolysis 6 ) HSP 1 Score: 85.5 bits (210), Expect = 1.2e-16 Identity = 45/93 (48.39%), Postives = 62/93 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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