CmaCh06G002210 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCCGACAGGCTCAGCGTTCTCTGAAACAATTCAGTTTCCTTCAAGTTTGGCGCGGCGGCTTCACCTCCGTTTCTTCTCAATGGCTGCAATCAATCTTCCTTTTATCCATTCTCCTCCATCTCTTCAGATCTTTTCAATAAAATCTCCCCAAAGCACTTCTAAATTCTTGCTGTTTTCTCAATCTATTGCTTCTCCTCTCCTTTCCAGTTCGTCGAAGCTCTACACCACAGCCAAAGCTCGCGCTTCTTCGTTAATTGCTTTTGCTGCCAGGAATCTCTCGGAATCTGAGCTTAACTCCGTGCCGGAGACTGCCGGGGAAATTGCTGGAAAATTTCCTTCTGATGCCGGTGTTTATGCCGTTTACGACAAGGACGGCGACGTTCAGTTCATCGGCATTACAAGGAGCATAGCAGGGAGCGTCGCCACTCACTGGAAATCGGTACCAGAGCTTTGTGTCTCTGTCAAGGTAGGAGGCTAATTGTATTTCTCCACTTTGTTCTTGTTGCTTCTGTCTTTAATTTTTTCCATTTCCAGCCGTAATTGATTGTTGGGAAGGTCTGTTGAGGTTATGTCCTAGTGCGATGCGTAATGAATTGAAAATGGTGCGGTGTACTCTGTGGATTATAGATCTCCTCCATTAGAAGTAATATGGAAAACGCTACTTTTGGTCCAAGGAAATTGTGTGTATATGCTTTTATCATCGTTACCAATGAACTGATATCTTAATCTTTTGCCAATCAAGCTTTTGGGAACTTAATCTAGTCTAGGATTCTCAGTTTTCATCTGGCTTGTAGTTATAAATTTGCATCTTAATCAAGTGGTCTTCTTCGGTTTCTGCTGCTGGCAATTGTTCATTACTGCCCAACTCATAAGTTCATGGTTGAAATGGTGTAGAAGATAGCTGGATCGAGGGGAATCCATGTAAATCGTAGTTTAAGAATGGGAAATCGACGATCACTTGCTGAACTCGAGCAAAATTGATTTTCACTTGCTTCTATTTAAAATCTTTTAGTTCTCTGCTTGCACGTGTATTTCATTATTTTGTGCCTGGCAGGTGAAAGCAAGTCCCAGGCAGCTTCCTGTTGACTGTACTTAATGAACTTTTCTTGAAGAAGACGATGATTTTATCAGCTTTCTGAATTAGGACCTTGCATTTATTCTTCTTTTTTTTGTTTGTTTCATGAGAAATAGAACTTTCTCTGAGATCCATGTACGAATATAAGAACACAGCCTAAGAAATAGGAGCCACCACAACCAATTATATAGAAATGAGCTATAATCCAAAAGAATGAGACCTAACAGAAACAACATTAAACCTAGCAAGGGACCAAAGGTCCAAAAATCTCATCGCTAGATCTCTCCCAACCCCTATGTTTTACAAGATTCTTCGGCAGTTGCACCTTCGGCAACGCTATTTTGTTGTTGGGCAATTGGTTATATCTCCAAGGATGTATAGAATTCAGATACTTGAAAGTTATCTTCCCACTCTTCACTAATGCACTCCGTTGTCATTTGAATTCAAATCCTGGCACGATAGAAATACGACAAACCTAAATTACTGGTAGAAGAAGTAGGTATGGTTTTATGAAGTACTCTAGACTTGAGAGGCATGCTGTGTTACTTTATCTATTGTTTTGACGAGGAGTTGTGCTATAATTCAAGTTTTCTGTGCAGATATAGGACTCAATGATCTTACTTATCCTTTCCTTTTCTTGAATGTGTTATTCTCTGTAGTTCGGAGTAGTAGATGAGCCTGATAGAACAACCTTAACACAAGCATGGAAGTCATGGATGGAAGAACACATAAAAGCCACTGGGAAGGTACCACCAGGTAATGAATCTGGCAATGCCACATGGGTAAGGCAGCCACCGAAGAAGAAGGCTGATCTGAGGTTGACGCCTGGTCGACATGTTCAACTTACAGTCCCATTGGAAGAACTCATTGATCAATTGGTGAAGGAGAACAAGGTTGTTGCATTCATCAAGGGTTCAAGAAGTGCTCCGTTATGCGGTTTCTCGCAAAGGGTAATAGGCATTCTTGAAGCTGAAGGCGTAGATTATGAGAGCGTCGATGTGCTCGATGAAGAATACAACAATGGGCTGAGGGAATCTCTCAAAACATACAGCAACTGGCCTACATTTCCTCAAATCTTTGTGGATGGCCAATTAATTGGAGGTTGTGACATTCTTAGCTCTATGCATGAAAAAGGTGAACTTGCTGGTTTGTTCAAGAATTGATTATCAGATTTTAAGTTTTAGCAGCTAATACTTTGCTGGAGTGAAAGGCCTAATTAAAAGGAGATGAGAATGTGCTTGCTTTCATGCTTTGGCCCGTTGTTCTATAGAACTGTAGTTTCTGTTTCATCAAGTCGAACAAAATTCTTGTTT ATGTCTCCGACAGGCTCAGCGTTCTCTGAAACAATTCAGTTTCCTTCAAGTTTGGCGCGGCGGCTTCACCTCCGTTTCTTCTCAATGGCTGCAATCAATCTTCCTTTTATCCATTCTCCTCCATCTCTTCAGATCTTTTCAATAAAATCTCCCCAAAGCACTTCTAAATTCTTGCTGTTTTCTCAATCTATTGCTTCTCCTCTCCTTTCCAGTTCGTCGAAGCTCTACACCACAGCCAAAGCTCGCGCTTCTTCGTTAATTGCTTTTGCTGCCAGGAATCTCTCGGAATCTGAGCTTAACTCCGTGCCGGAGACTGCCGGGGAAATTGCTGGAAAATTTCCTTCTGATGCCGGTGTTTATGCCGTTTACGACAAGGACGGCGACGTTCAGTTCATCGGCATTACAAGGAGCATAGCAGGGAGCGTCGCCACTCACTGGAAATCGGTACCAGAGCTTTGTGTCTCTGTCAAGTTCGGAGTAGTAGATGAGCCTGATAGAACAACCTTAACACAAGCATGGAAGTCATGGATGGAAGAACACATAAAAGCCACTGGGAAGGTACCACCAGGTAATGAATCTGGCAATGCCACATGGGTAAGGCAGCCACCGAAGAAGAAGGCTGATCTGAGGTTGACGCCTGGTCGACATGTTCAACTTACAGTCCCATTGGAAGAACTCATTGATCAATTGGTGAAGGAGAACAAGGTTGTTGCATTCATCAAGGGTTCAAGAAGTGCTCCGTTATGCGGTTTCTCGCAAAGGGTAATAGGCATTCTTGAAGCTGAAGGCGTAGATTATGAGAGCGTCGATGTGCTCGATGAAGAATACAACAATGGGCTGAGGGAATCTCTCAAAACATACAGCAACTGGCCTACATTTCCTCAAATCTTTGTGGATGGCCAATTAATTGGAGGTTGTGACATTCTTAGCTCTATGCATGAAAAAGGTGAACTTGCTGGTTTGTTCAAGAATTGATTATCAGATTTTAAGTTTTAGCAGCTAATACTTTGCTGGAGTGAAAGGCCTAATTAAAAGGAGATGAGAATGTGCTTGCTTTCATGCTTTGGCCCGTTGTTCTATAGAACTGTAGTTTCTGTTTCATCAAGTCGAACAAAATTCTTGTTT ATGTCTCCGACAGGCTCAGCGTTCTCTGAAACAATTCAGTTTCCTTCAAGTTTGGCGCGGCGGCTTCACCTCCGTTTCTTCTCAATGGCTGCAATCAATCTTCCTTTTATCCATTCTCCTCCATCTCTTCAGATCTTTTCAATAAAATCTCCCCAAAGCACTTCTAAATTCTTGCTGTTTTCTCAATCTATTGCTTCTCCTCTCCTTTCCAGTTCGTCGAAGCTCTACACCACAGCCAAAGCTCGCGCTTCTTCGTTAATTGCTTTTGCTGCCAGGAATCTCTCGGAATCTGAGCTTAACTCCGTGCCGGAGACTGCCGGGGAAATTGCTGGAAAATTTCCTTCTGATGCCGGTGTTTATGCCGTTTACGACAAGGACGGCGACGTTCAGTTCATCGGCATTACAAGGAGCATAGCAGGGAGCGTCGCCACTCACTGGAAATCGGTACCAGAGCTTTGTGTCTCTGTCAAGTTCGGAGTAGTAGATGAGCCTGATAGAACAACCTTAACACAAGCATGGAAGTCATGGATGGAAGAACACATAAAAGCCACTGGGAAGGTACCACCAGGTAATGAATCTGGCAATGCCACATGGGTAAGGCAGCCACCGAAGAAGAAGGCTGATCTGAGGTTGACGCCTGGTCGACATGTTCAACTTACAGTCCCATTGGAAGAACTCATTGATCAATTGGTGAAGGAGAACAAGGTTGTTGCATTCATCAAGGGTTCAAGAAGTGCTCCGTTATGCGGTTTCTCGCAAAGGGTAATAGGCATTCTTGAAGCTGAAGGCGTAGATTATGAGAGCGTCGATGTGCTCGATGAAGAATACAACAATGGGCTGAGGGAATCTCTCAAAACATACAGCAACTGGCCTACATTTCCTCAAATCTTTGTGGATGGCCAATTAATTGGAGGTTGTGACATTCTTAGCTCTATGCATGAAAAAGGTGAACTTGCTGGTTTGTTCAAGAATTGA MSPTGSAFSETIQFPSSLARRLHLRFFSMAAINLPFIHSPPSLQIFSIKSPQSTSKFLLFSQSIASPLLSSSSKLYTTAKARASSLIAFAARNLSESELNSVPETAGEIAGKFPSDAGVYAVYDKDGDVQFIGITRSIAGSVATHWKSVPELCVSVKFGVVDEPDRTTLTQAWKSWMEEHIKATGKVPPGNESGNATWVRQPPKKKADLRLTPGRHVQLTVPLEELIDQLVKENKVVAFIKGSRSAPLCGFSQRVIGILEAEGVDYESVDVLDEEYNNGLRESLKTYSNWPTFPQIFVDGQLIGGCDILSSMHEKGELAGLFKN Homology
BLAST of CmaCh06G002210 vs. ExPASy Swiss-Prot
Match: Q8H7F6 (Bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS16 PE=1 SV=2) HSP 1 Score: 352.4 bits (903), Expect = 5.3e-96 Identity = 182/297 (61.28%), Postives = 231/297 (77.78%), Query Frame = 0
BLAST of CmaCh06G002210 vs. ExPASy Swiss-Prot
Match: Q2QX01 (Monothiol glutaredoxin-S12, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS12 PE=2 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 1.4e-85 Identity = 165/265 (62.26%), Postives = 199/265 (75.09%), Query Frame = 0
BLAST of CmaCh06G002210 vs. ExPASy Swiss-Prot
Match: Q0IWL9 (Monothiol glutaredoxin-S11 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS11 PE=2 SV=2) HSP 1 Score: 113.6 bits (283), Expect = 4.1e-24 Identity = 48/101 (47.52%), Postives = 73/101 (72.28%), Query Frame = 0
BLAST of CmaCh06G002210 vs. ExPASy Swiss-Prot
Match: Q6PBM1 (Glutaredoxin-related protein 5, mitochondrial OS=Danio rerio OX=7955 GN=glrx5 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 2.1e-23 Identity = 52/125 (41.60%), Postives = 84/125 (67.20%), Query Frame = 0
BLAST of CmaCh06G002210 vs. ExPASy Swiss-Prot
Match: Q68W05 (Probable monothiol glutaredoxin 2 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=grxC2 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 7.8e-23 Identity = 44/100 (44.00%), Postives = 71/100 (71.00%), Query Frame = 0
BLAST of CmaCh06G002210 vs. ExPASy TrEMBL
Match: A0A6J1I8B1 (bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470101 PE=3 SV=1) HSP 1 Score: 587.0 bits (1512), Expect = 4.7e-164 Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0
BLAST of CmaCh06G002210 vs. ExPASy TrEMBL
Match: A0A6J1GAT7 (bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452232 PE=3 SV=1) HSP 1 Score: 585.5 bits (1508), Expect = 1.4e-163 Identity = 294/296 (99.32%), Postives = 296/296 (100.00%), Query Frame = 0
BLAST of CmaCh06G002210 vs. ExPASy TrEMBL
Match: A0A0A0LF87 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731030 PE=3 SV=1) HSP 1 Score: 547.4 bits (1409), Expect = 4.1e-152 Identity = 272/295 (92.20%), Postives = 283/295 (95.93%), Query Frame = 0
BLAST of CmaCh06G002210 vs. ExPASy TrEMBL
Match: A0A5D3DMV3 (Bifunctional monothiol glutaredoxin-S16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00630 PE=3 SV=1) HSP 1 Score: 535.4 bits (1378), Expect = 1.6e-148 Identity = 268/295 (90.85%), Postives = 279/295 (94.58%), Query Frame = 0
BLAST of CmaCh06G002210 vs. ExPASy TrEMBL
Match: A0A1S3B6C9 (bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486275 PE=3 SV=1) HSP 1 Score: 535.4 bits (1378), Expect = 1.6e-148 Identity = 268/295 (90.85%), Postives = 279/295 (94.58%), Query Frame = 0
BLAST of CmaCh06G002210 vs. NCBI nr
Match: XP_022971349.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucurbita maxima]) HSP 1 Score: 587.0 bits (1512), Expect = 9.7e-164 Identity = 296/296 (100.00%), Postives = 296/296 (100.00%), Query Frame = 0
BLAST of CmaCh06G002210 vs. NCBI nr
Match: XP_022949016.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucurbita moschata] >KAG6596337.1 Bifunctional monothiol glutaredoxin-S16, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027889.1 Bifunctional monothiol glutaredoxin-S16, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 585.5 bits (1508), Expect = 2.8e-163 Identity = 294/296 (99.32%), Postives = 296/296 (100.00%), Query Frame = 0
BLAST of CmaCh06G002210 vs. NCBI nr
Match: XP_023538757.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 580.1 bits (1494), Expect = 1.2e-161 Identity = 290/296 (97.97%), Postives = 295/296 (99.66%), Query Frame = 0
BLAST of CmaCh06G002210 vs. NCBI nr
Match: XP_004137706.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucumis sativus] >KGN58741.1 hypothetical protein Csa_001627 [Cucumis sativus]) HSP 1 Score: 547.4 bits (1409), Expect = 8.6e-152 Identity = 272/295 (92.20%), Postives = 283/295 (95.93%), Query Frame = 0
BLAST of CmaCh06G002210 vs. NCBI nr
Match: XP_038906340.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Benincasa hispida]) HSP 1 Score: 547.0 bits (1408), Expect = 1.1e-151 Identity = 273/296 (92.23%), Postives = 283/296 (95.61%), Query Frame = 0
BLAST of CmaCh06G002210 vs. TAIR 10
Match: AT2G38270.1 (CAX-interacting protein 2 ) HSP 1 Score: 352.4 bits (903), Expect = 3.8e-97 Identity = 182/297 (61.28%), Postives = 231/297 (77.78%), Query Frame = 0
BLAST of CmaCh06G002210 vs. TAIR 10
Match: AT3G54900.1 (CAX interacting protein 1 ) HSP 1 Score: 104.4 bits (259), Expect = 1.8e-22 Identity = 47/100 (47.00%), Postives = 67/100 (67.00%), Query Frame = 0
BLAST of CmaCh06G002210 vs. TAIR 10
Match: AT4G04950.1 (thioredoxin family protein ) HSP 1 Score: 104.0 bits (258), Expect = 2.3e-22 Identity = 46/102 (45.10%), Postives = 69/102 (67.65%), Query Frame = 0
BLAST of CmaCh06G002210 vs. TAIR 10
Match: AT3G15660.1 (glutaredoxin 4 ) HSP 1 Score: 93.2 bits (230), Expect = 4.1e-19 Identity = 40/105 (38.10%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of CmaCh06G002210 vs. TAIR 10
Match: AT3G15660.2 (glutaredoxin 4 ) HSP 1 Score: 93.2 bits (230), Expect = 4.1e-19 Identity = 40/105 (38.10%), Postives = 71/105 (67.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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