CmaCh06G001600 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G001600
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	C2H2-type domain-containing protein
Location	Cma_Chr06: 801423 .. 802112 (-)
RNA-Seq Expression	CmaCh06G001600
Synteny	CmaCh06G001600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAATGCCAATACCAATGTCCCACCGGAGACCTCTTCCGACCAATGCCACGGCGGAGAAAGGTCTCCGACGGGGCCGACTTCTCCTCCACCAACTCACAACCGCGATAATAACCCTAACCCCACCACCGGACACTCATCCTACTCCGACACGCTACTGGTACCTCCCGCCGCCGACACTAGCCGGCGGGATGCCCTTCTCGACATCGGAACGTCGTACGAGAACGTCGTAGGAAGTTCCGATGGCGAGCCAGGGAAAAAGAGAGGACGAGGTGACGGAGAAGAGGAGGAGGAGGAGCAGCAGCCGCAGCAGCAGGTGAAAGCTGCAAAGAAGAAAGGGGAGCTGACGGAGGTTCCAAAAGGGGAGCCTAGATGTGCGACTTGCAACAAAGTGTTCAAATCGTGGAAAGCACTTTTTGGGCACTTGAGGTCTCACCCGGAACGGACCTACCGTGGGGCTCTTCCGCCACCAACCGCCGCAGAGCTCGACATTCGCCGCTGTCAGCAACAGCTCGCTTCCACTTTGCTGACTGTGGCTCAGGAAGTGGCGGCGTCGCGAAGAGGGCTGGATATTGATCTCAACCAGCCCTCCACTGCTGACGACGGTGACTGGCCGGAGAAGACCGGCGGCGTGGGGTTCGATCTGAACGCCGATCCGCCGCCGGGAAGTGATGACGAGGACTGA

mRNA sequence

ATGGAGAAGAATGCCAATACCAATGTCCCACCGGAGACCTCTTCCGACCAATGCCACGGCGGAGAAAGGTCTCCGACGGGGCCGACTTCTCCTCCACCAACTCACAACCGCGATAATAACCCTAACCCCACCACCGGACACTCATCCTACTCCGACACGCTACTGGTACCTCCCGCCGCCGACACTAGCCGGCGGGATGCCCTTCTCGACATCGGAACGTCGTACGAGAACGTCGTAGGAAGTTCCGATGGCGAGCCAGGGAAAAAGAGAGGACGAGGTGACGGAGAAGAGGAGGAGGAGGAGCAGCAGCCGCAGCAGCAGGTGAAAGCTGCAAAGAAGAAAGGGGAGCTGACGGAGGTTCCAAAAGGGGAGCCTAGATGTGCGACTTGCAACAAAGTGTTCAAATCGTGGAAAGCACTTTTTGGGCACTTGAGGTCTCACCCGGAACGGACCTACCGTGGGGCTCTTCCGCCACCAACCGCCGCAGAGCTCGACATTCGCCGCTGTCAGCAACAGCTCGCTTCCACTTTGCTGACTGTGGCTCAGGAAGTGGCGGCGTCGCGAAGAGGGCTGGATATTGATCTCAACCAGCCCTCCACTGCTGACGACGGTGACTGGCCGGAGAAGACCGGCGGCGTGGGGTTCGATCTGAACGCCGATCCGCCGCCGGGAAGTGATGACGAGGACTGA

Coding sequence (CDS)

ATGGAGAAGAATGCCAATACCAATGTCCCACCGGAGACCTCTTCCGACCAATGCCACGGCGGAGAAAGGTCTCCGACGGGGCCGACTTCTCCTCCACCAACTCACAACCGCGATAATAACCCTAACCCCACCACCGGACACTCATCCTACTCCGACACGCTACTGGTACCTCCCGCCGCCGACACTAGCCGGCGGGATGCCCTTCTCGACATCGGAACGTCGTACGAGAACGTCGTAGGAAGTTCCGATGGCGAGCCAGGGAAAAAGAGAGGACGAGGTGACGGAGAAGAGGAGGAGGAGGAGCAGCAGCCGCAGCAGCAGGTGAAAGCTGCAAAGAAGAAAGGGGAGCTGACGGAGGTTCCAAAAGGGGAGCCTAGATGTGCGACTTGCAACAAAGTGTTCAAATCGTGGAAAGCACTTTTTGGGCACTTGAGGTCTCACCCGGAACGGACCTACCGTGGGGCTCTTCCGCCACCAACCGCCGCAGAGCTCGACATTCGCCGCTGTCAGCAACAGCTCGCTTCCACTTTGCTGACTGTGGCTCAGGAAGTGGCGGCGTCGCGAAGAGGGCTGGATATTGATCTCAACCAGCCCTCCACTGCTGACGACGGTGACTGGCCGGAGAAGACCGGCGGCGTGGGGTTCGATCTGAACGCCGATCCGCCGCCGGGAAGTGATGACGAGGACTGA

Protein sequence

MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAADTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED

Homology

[Close]

BLAST of CmaCh06G001600 vs. ExPASy Swiss-Prot
Match: O65499 (Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.8e-05
Identity = 32/79 (40.51%), Postives = 38/79 (48.10%), Query Frame = 0


Query: 81  SSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKAL 140
           S D  P KKR +          +   + K  KK       PK    C  C + F SWKAL
Sbjct: 35  SYDHSPKKKRTKTVASSSSSSPKSASKPKYTKKPD--PNAPKITRPCTECGRKFWSWKAL 94

Query: 141 FGHLRSHPERTYRGALPPP 160
           FGH+R HPER +RG  PPP
Sbjct: 95  FGHMRCHPERQWRGINPPP 111

[Close]

BLAST of CmaCh06G001600 vs. ExPASy TrEMBL
Match: A0A6J1I5D3 (uncharacterized protein LOC111470063 OS=Cucurbita maxima OX=3661 GN=LOC111470063 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 2.0e-124
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA 60
           MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA
Sbjct: 1   MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA 60

Query: 61  DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEV 120
           DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEV
Sbjct: 61  DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEV 120

Query: 121 PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV 180
           PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV
Sbjct: 121 PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV 180

Query: 181 AQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED 230
           AQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED
Sbjct: 181 AQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED 229

[Close]

BLAST of CmaCh06G001600 vs. ExPASy TrEMBL
Match: A0A6J1HF26 (uncharacterized protein LOC111462854 OS=Cucurbita moschata OX=3662 GN=LOC111462854 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.1e-114
Identity = 217/230 (94.35%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA 60
           MEKNANTNVP ETSSDQ HGGERSPTGPTSPPPTHNRDNNPNPTT HSSYSDTL VPPAA
Sbjct: 1   MEKNANTNVPSETSSDQRHGGERSPTGPTSPPPTHNRDNNPNPTTEHSSYSDTLRVPPAA 60

Query: 61  DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQ-PQQQVKAAKKKGELTE 120
           +TSRRDALLD+GTSY+N+VGSS+GEPGKKRGRGDGEEEEE+QQ PQQQVKAAKKKGELTE
Sbjct: 61  ETSRRDALLDVGTSYQNIVGSSEGEPGKKRGRGDGEEEEEQQQPPQQQVKAAKKKGELTE 120

Query: 121 VPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLT 180
           VPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLT
Sbjct: 121 VPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLT 180

Query: 181 VAQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED 230
           VAQEVAASRRGLDIDLNQPSTADDGD PEKTGGVGFDLNADPPP SDDED
Sbjct: 181 VAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPESDDED 230

[Close]

BLAST of CmaCh06G001600 vs. ExPASy TrEMBL
Match: A0A5D3CLS0 (Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00180 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 4.2e-74
Identity = 171/248 (68.95%), Postives = 183/248 (73.79%), Query Frame = 0


Query: 1   MEKNANTN----------VPPETSSDQCHGGERSPTGPTSPPPTHNRD--NNPNPTTGHS 60
           MEKN NTN             ETS DQ HGGERSP   +  PP  N D  NNP PT    
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHGGERSPMAASPLPPARNIDDINNP-PTVVIE 60

Query: 61  SYSDTLLVPPAA----DTSRR---DALLDIGT-SYENVVGSSDGEPGKKRGRGDGEEEEE 120
             S TL+  P +    D  RR   DA+ D+GT S+E+V GSSD E GKKRGRGDG E+  
Sbjct: 61  PSSSTLVAAPESATPGDVRRRQSVDAMFDVGTSSHEHVGGSSDAEAGKKRGRGDGGEQ-- 120

Query: 121 EQQPQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPT 180
               QQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPT
Sbjct: 121 ----QQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPT 180

Query: 181 AAELDIRRCQQQLASTLLTVAQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNAD 229
           AAELDIRRCQQQLASTLLTVAQ+VAA+RRGLDIDLNQPSTADDGD P+ T   GFDLN +
Sbjct: 181 AAELDIRRCQQQLASTLLTVAQQVAATRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLE 240

[Close]

BLAST of CmaCh06G001600 vs. ExPASy TrEMBL
Match: A0A1S3BLF2 (uncharacterized protein LOC103491103 OS=Cucumis melo OX=3656 GN=LOC103491103 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 4.2e-74
Identity = 171/248 (68.95%), Postives = 183/248 (73.79%), Query Frame = 0


Query: 1   MEKNANTN----------VPPETSSDQCHGGERSPTGPTSPPPTHNRD--NNPNPTTGHS 60
           MEKN NTN             ETS DQ HGGERSP   +  PP  N D  NNP PT    
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHGGERSPMAASPLPPARNIDDINNP-PTVVIE 60

Query: 61  SYSDTLLVPPAA----DTSRR---DALLDIGT-SYENVVGSSDGEPGKKRGRGDGEEEEE 120
             S TL+  P +    D  RR   DA+ D+GT S+E+V GSSD E GKKRGRGDG E+  
Sbjct: 61  PSSSTLVAAPESATPGDVRRRQSVDAMFDVGTSSHEHVGGSSDAEAGKKRGRGDGGEQ-- 120

Query: 121 EQQPQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPT 180
               QQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPT
Sbjct: 121 ----QQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPT 180

Query: 181 AAELDIRRCQQQLASTLLTVAQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNAD 229
           AAELDIRRCQQQLASTLLTVAQ+VAA+RRGLDIDLNQPSTADDGD P+ T   GFDLN +
Sbjct: 181 AAELDIRRCQQQLASTLLTVAQQVAATRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLE 240

[Close]

BLAST of CmaCh06G001600 vs. ExPASy TrEMBL
Match: A0A0A0L0X7 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G001720 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 9.6e-71
Identity = 164/247 (66.40%), Postives = 179/247 (72.47%), Query Frame = 0


Query: 1   MEKNANTN----------VPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSY 60
           MEKN NTN             ETS DQ H  ERSP   + PPP    D+  NP T     
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60

Query: 61  SDTLLVP-----PAADTSRR---DALLDIGT-SYENVVGSSDGEPGKKRGRGDGEEEEEE 120
           S +++V         D  RR   +A+ D+GT S+E+V GSSD E GKKRGRGDG E+   
Sbjct: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQ--- 120

Query: 121 QQPQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTA 180
              QQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTA
Sbjct: 121 ---QQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTA 180

Query: 181 AELDIRRCQQQLASTLLTVAQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADP 229
           AELDIRRCQQQLASTLLTVAQ+V+ASRRGLDIDLNQPSTADDGD P+ T   GFDLN +P
Sbjct: 181 AELDIRRCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEP 240

[Close]

BLAST of CmaCh06G001600 vs. NCBI nr
Match: XP_022971305.1 (uncharacterized protein LOC111470063 [Cucurbita maxima])

HSP 1 Score: 454.9 bits (1169), Expect = 4.1e-124
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA 60
           MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA
Sbjct: 1   MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA 60

Query: 61  DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEV 120
           DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEV
Sbjct: 61  DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEV 120

Query: 121 PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV 180
           PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV
Sbjct: 121 PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV 180

Query: 181 AQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED 230
           AQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED
Sbjct: 181 AQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED 229

[Close]

BLAST of CmaCh06G001600 vs. NCBI nr
Match: XP_022962440.1 (uncharacterized protein LOC111462854 [Cucurbita moschata])

HSP 1 Score: 422.5 bits (1085), Expect = 2.2e-114
Identity = 217/230 (94.35%), Postives = 223/230 (96.96%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA 60
           MEKNANTNVP ETSSDQ HGGERSPTGPTSPPPTHNRDNNPNPTT HSSYSDTL VPPAA
Sbjct: 1   MEKNANTNVPSETSSDQRHGGERSPTGPTSPPPTHNRDNNPNPTTEHSSYSDTLRVPPAA 60

Query: 61  DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQ-PQQQVKAAKKKGELTE 120
           +TSRRDALLD+GTSY+N+VGSS+GEPGKKRGRGDGEEEEE+QQ PQQQVKAAKKKGELTE
Sbjct: 61  ETSRRDALLDVGTSYQNIVGSSEGEPGKKRGRGDGEEEEEQQQPPQQQVKAAKKKGELTE 120

Query: 121 VPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLT 180
           VPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLT
Sbjct: 121 VPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLT 180

Query: 181 VAQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED 230
           VAQEVAASRRGLDIDLNQPSTADDGD PEKTGGVGFDLNADPPP SDDED
Sbjct: 181 VAQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPESDDED 230

[Close]

BLAST of CmaCh06G001600 vs. NCBI nr
Match: XP_023539548.1 (uncharacterized protein LOC111800191 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 418.3 bits (1074), Expect = 4.2e-113
Identity = 213/229 (93.01%), Postives = 218/229 (95.20%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA 60
           MEKNANTNVPPETSSDQ HGGERSPTGPTSP PTHNRDNNPNPTT HSSYSD L VPPAA
Sbjct: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSPQPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60

Query: 61  DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEV 120
           +TSRRD L D+GTSYEN+VGSS+GEPGKKRGRG GEEEEE+Q P QQVKAAKKKGELTEV
Sbjct: 61  ETSRRDGLFDVGTSYENIVGSSEGEPGKKRGRGGGEEEEEQQPPPQQVKAAKKKGELTEV 120

Query: 121 PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV 180
           PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV
Sbjct: 121 PKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTV 180

Query: 181 AQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED 230
           AQEVAASRRGLDIDLNQPSTADDGD PEKTGGVGFDLNADPPPGSDDED
Sbjct: 181 AQEVAASRRGLDIDLNQPSTADDGDSPEKTGGVGFDLNADPPPGSDDED 229

[Close]

BLAST of CmaCh06G001600 vs. NCBI nr
Match: KAG6596278.1 (Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 417.2 bits (1071), Expect = 9.4e-113
Identity = 216/231 (93.51%), Postives = 221/231 (95.67%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA 60
           MEKNANTNVPPETSSDQ HGGERSPTGPTS PPTHNRDNNPNPTT HSSYSD L VPPAA
Sbjct: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSSPPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60

Query: 61  DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQP--QQQVKAAKKKGELT 120
           +T+RRDALLD+GTSYENVVGSS+GEPGKKRGRGDGEEEEE+QQP  QQQVKAAKKKGELT
Sbjct: 61  ETNRRDALLDVGTSYENVVGSSEGEPGKKRGRGDGEEEEEQQQPPQQQQVKAAKKKGELT 120

Query: 121 EVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLL 180
           EVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLL
Sbjct: 121 EVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLL 180

Query: 181 TVAQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED 230
           TVAQEVAASRRGLDIDLNQPSTADDG  PEKTGGVGFDLNADPPP SDDED
Sbjct: 181 TVAQEVAASRRGLDIDLNQPSTADDGHSPEKTGGVGFDLNADPPPESDDED 231

[Close]

BLAST of CmaCh06G001600 vs. NCBI nr
Match: KAG7027829.1 (Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414.8 bits (1065), Expect = 4.7e-112
Identity = 216/232 (93.10%), Postives = 220/232 (94.83%), Query Frame = 0


Query: 1   MEKNANTNVPPETSSDQCHGGERSPTGPTSPPPTHNRDNNPNPTTGHSSYSDTLLVPPAA 60
           MEKNANTNVPPETSSDQ HGGERSPTGPTS PPTHNRDNNPNPTT HSSYSD L VPPAA
Sbjct: 1   MEKNANTNVPPETSSDQRHGGERSPTGPTSSPPTHNRDNNPNPTTEHSSYSDRLPVPPAA 60

Query: 61  DTSRRDALLDIGTSYENVVGSSDGEPGKKRGRGDGEEEEEEQQ---PQQQVKAAKKKGEL 120
           +TSRRDALLD+GTSYENVVGSS+GEPGKKRGRGDGEEEEE+QQ    QQQVKAAKKKGEL
Sbjct: 61  ETSRRDALLDVGTSYENVVGSSEGEPGKKRGRGDGEEEEEQQQQPPQQQQVKAAKKKGEL 120

Query: 121 TEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTL 180
           TEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTL
Sbjct: 121 TEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTL 180

Query: 181 LTVAQEVAASRRGLDIDLNQPSTADDGDWPEKTGGVGFDLNADPPPGSDDED 230
           LTVAQEVAASRRGLDIDLNQPSTADDG  PEKTGGVGFDLNADPPP SDDED
Sbjct: 181 LTVAQEVAASRRGLDIDLNQPSTADDGHSPEKTGGVGFDLNADPPPESDDED 232

[Close]

BLAST of CmaCh06G001600 vs. TAIR 10
Match: AT4G35700.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 75.9 bits (185), Expect = 4.8e-14
Identity = 59/152 (38.82%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 108 VKAAKKKG--ELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPT--AAE 167
           VK  +KKG  +LT +P+G P C  C K F SWKA+FGHLR H +R Y G LPPPT  AAE
Sbjct: 123 VKKPRKKGSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHKDRGYLGFLPPPTFNAAE 182

Query: 168 LDI----RRCQQQLASTLLTVAQEVAASRRG------------------LDIDLNQPSTA 227
                          +T ++V +   AS  G                    IDLN    A
Sbjct: 183 EGFGGVATASTGGAVATAISVGEVPTASSAGGLATASSDGEGLVSSIGRARIDLN----A 242

Query: 228 DDGDWPEKTGGVG----FDLNADPPPGSDDED 230
           D  +  +K  GVG    FDLN  PPP  D+E+
Sbjct: 243 DPVEEEDKVIGVGSKRKFDLNRSPPPDGDEEN 270

[Close]

BLAST of CmaCh06G001600 vs. TAIR 10
Match: AT4G35610.1 (zinc finger (C2H2 type) family protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 58/158 (36.71%), Postives = 75/158 (47.47%), Query Frame = 0


Query: 79  VGSSDGEPGKKRGR----------GDGEEEEEEQQPQQQVKAAKKKGELTEVPKGEPRCA 138
           +    G  GKK+ R          GDG  E E ++P+      KK  ELT  PKG P C 
Sbjct: 88  MNEGSGSGGKKKSRPRISTQTDDEGDGLGEGEAKKPK------KKAKELTHPPKGPPVCH 147

Query: 139 TCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQEVAASR 198
            C + F SWKA+FGH+R+H +R Y+G LPPPT +    R     L S   T+A     S 
Sbjct: 148 ICGRGFGSWKAVFGHMRAHRDRNYQGFLPPPTFSAGAERFVIPGLRSA-FTIATVGGGSS 207

Query: 199 RGLDI---DLNQPSTADDGDWPEKTG--GVGFDLNADP 222
            G+ +        S +  GD P   G  G G DLN +P
Sbjct: 208 GGVAVGGRSSGDFSGSGGGDAPGSEGGRGSGIDLNVEP 238

[Close]

BLAST of CmaCh06G001600 vs. TAIR 10
Match: AT2G26940.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.6e-07
Identity = 19/45 (42.22%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 122 KGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDI 167
           +G+ RC  C K F++  +LFGH+R HP+RT++G  PPP + + ++
Sbjct: 116 EGKIRCCLCGKEFQTMHSLFGHMRRHPDRTWKGIRPPPPSEKFNL 160

[Close]

BLAST of CmaCh06G001600 vs. TAIR 10
Match: AT4G35280.1 (C2H2-like zinc finger protein )

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06
Identity = 32/79 (40.51%), Postives = 38/79 (48.10%), Query Frame = 0


Query: 81  SSDGEPGKKRGRGDGEEEEEEQQPQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKAL 140
           S D  P KKR +          +   + K  KK       PK    C  C + F SWKAL
Sbjct: 35  SYDHSPKKKRTKTVASSSSSSPKSASKPKYTKKPD--PNAPKITRPCTECGRKFWSWKAL 94

Query: 141 FGHLRSHPERTYRGALPPP 160
           FGH+R HPER +RG  PPP
Sbjct: 95  FGHMRCHPERQWRGINPPP 111

[Close]

BLAST of CmaCh06G001600 vs. TAIR 10
Match: AT5G56200.1 (C2H2 type zinc finger transcription factor family )

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06
Identity = 20/36 (55.56%), Postives = 25/36 (69.44%), Query Frame = 0


Query: 124 EPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPP 160
           E  C  C K F S KAL+GH+R HP+R ++G LPPP
Sbjct: 129 EVACCVCYKKFTSMKALYGHMRFHPDRGWKGVLPPP 164

The following BLAST results are available for this feature:

BLAST of CmaCh06G001600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65499	1.8e-05	40.51	Zinc finger protein ZAT3 OS=Arabidopsis thaliana OX=3702 GN=ZAT3 PE=1 SV=1	[more]

BLAST of CmaCh06G001600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I5D3	2.0e-124	100.00	uncharacterized protein LOC111470063 OS=Cucurbita maxima OX=3661 GN=LOC111470063...	[more]
A0A6J1HF26	1.1e-114	94.35	uncharacterized protein LOC111462854 OS=Cucurbita moschata OX=3662 GN=LOC1114628...	[more]
A0A5D3CLS0	4.2e-74	68.95	Zinc finger family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BLF2	4.2e-74	68.95	uncharacterized protein LOC103491103 OS=Cucumis melo OX=3656 GN=LOC103491103 PE=...	[more]
A0A0A0L0X7	9.6e-71	66.40	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G001720 P...	[more]

BLAST of CmaCh06G001600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971305.1	4.1e-124	100.00	uncharacterized protein LOC111470063 [Cucurbita maxima]	[more]
XP_022962440.1	2.2e-114	94.35	uncharacterized protein LOC111462854 [Cucurbita moschata]	[more]
XP_023539548.1	4.2e-113	93.01	uncharacterized protein LOC111800191 [Cucurbita pepo subsp. pepo]	[more]
KAG6596278.1	9.4e-113	93.51	Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7027829.1	4.7e-112	93.10	Zinc finger protein ZAT3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh06G001600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35700.1	4.8e-14	38.82	zinc finger (C2H2 type) family protein	[more]
AT4G35610.1	1.5e-12	36.71	zinc finger (C2H2 type) family protein	[more]
AT2G26940.1	2.6e-07	42.22	C2H2-type zinc finger family protein	[more]
AT4G35280.1	1.3e-06	40.51	C2H2-like zinc finger protein	[more]
AT5G56200.1	1.3e-06	55.56	C2H2 type zinc finger transcription factor family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 126..149 e-value: 8.1E-8 score: 32.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..121
None	No IPR available	PANTHER	PTHR47591	ZINC FINGER PROTEIN ZAT2-RELATED	coord: 14..229
None	No IPR available	PANTHER	PTHR47591:SF4	TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE	coord: 14..229
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 127..147
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 125..147 score: 8.64193

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G001600.1	CmaCh06G001600.1	mRNA