CmaCh06G000900 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh06G000900
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	50S ribosomal protein L22, chloroplastic
Location	Cma_Chr06: 505326 .. 511234 (+)
RNA-Seq Expression	CmaCh06G000900
Synteny	CmaCh06G000900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGTATGTTGCAAATTTTCACGGGAAATTGTTTGGTATAATCTATGTCAATGGTGTTTAATATTTTTCTCGAACAATAAAATTCATATTTTCAAAATTTTCTACTGTGTTTCTCGAATTTATGAGTGTATAAATCCAAGTCTACCGATAGAAGAGATTTCCACATTTTAAGGACGTTCGTTCTTCTCCACGAGATATGATTTTTTATTTATTTTTATTTTTTTTGTTAATTTAAAAAAACAATGAAATTATTAATTCTATAATTTTGAGTTTAGAATTTACCGATAAAAATAAATAAAAATTGGAAGTTAACCTTAACGGTAAATTCATTTACCCATATGAACATTTTGTTTTAACCTAATAAAATTACATTGTGTATTCCATATGGGAGAAGTTTAGGGCTGTAGCGTTTATACCCACGACTCACACGCATCGCTAGGCTTCTTCCTCTAACACTTCCGCGCACTTTCCTCTCCCGATTCTCTGCTCAGTTCAGCTCGCGCCTCTTCTTCCCTCTCGACTTGCGAAGGCCATTTGTCGAATCCCCATCGTTTGCTGGCGATAAAGCAAGAGTGATCGAAGTGTGCAACCATTCCACAACCAGCACGAGTTCTTCCATTACGATCAGATTCATTTCCCGTTTGGTATGGCTTTCGTATTCGTTTATTGTTCCATCTGCTGACAAACTAGCTCGACGTTCTTCCTTGACCCATTTCAAAGATCAATTGCATTCAGAAAATTAGCATAATCAATTGAGTTTCTGGATTTGGACTCTTTTCTGTCAGCTACTCTGAGACATTGGTTGAAGTGCAGAAATACAAGGATAATTTGGATTATTTAGTACCTTAAATTTAGGAATTAATCCGGCAGATTGTTGATTGCAATGTGGATTGAGCTGCTGTCGTTTTGATTGTGTTGGGTTTTTTTTTTTTGTACCCCTGTTGAGGAAAATGTTGATTCGTAGTTTCTCCTTTATGTTATACGAGTCATAAAGTTTGAGAAATGATGTGATATGAGATGAAATTGTGGATTTGCCGTAATAGGAAGTTTAGTGATGAAGTTCTCTTCTTTGTAATTTCTTATGTTGGATCTCTATTTATCTGTTGGGTGACTAATTATCTTCAGTATTCAAAGATTACGTTGTCTTTCTTTTTGGTTTTCAGGACTTCCGCAGTATTGTTTTTGATCATGGGTGGTTGGCAAAGATGTATTCGGTCCATGCTTGGGCATGTGCAGAAGAGAGTGGAATTGAGTTATAATGCAGCTGTCAACTCTAAATGTTATCGCTCGCAATCCACTCTTTCATATGGTCAGTGATACTTTCTTTTGGACGAGTGTATGAATCATATAAGACCTTCTAGCCCATTCAAGCATCAACATATCGTACATATAATAGAAACAGAAAATTATTTGCTAAGTTGTTCTACCTTGCAGAATCATTAAGCGTGAATATTGATTTGATGAAGTATGTAATAACTATATAACCTTTACAATCTGCCTTAAAGTTATTCTTAAAAGTTGAAAGTGGTGGAGAAAAGAAAGCATAAAAATGTTTTCAAAACAGCTTCCAAATAACTTCTTGATCAATTTGATTAGAGCTTTCTTTTGGGTTGTGTGGAACAAGAGGAACCAAAGGTTTTCGTGAACAATGAGGTGTTGATCATTAAAATGAAGAACCCATAATATTACATTACTTAATAGCATTAATTACCCAAAACCTTATGATAGACTTGTTCATAACATTACTTGGCTATAGTGTAAATTGTCTTCTTTATTCAATCTTATAACTTGTTCCTCTTCTCCAATATGGAATCCAAAATGCGATTAAATAGGTTGCAATCCTGGTAATTTGTGTTTTTGAGAGGACTCCCTCTTCATAATGTTTATCATATTATTTGTTCATTACAAACTGTTTTGCATCTGACTAAAATCAGTAGAACCACAGAATCTACAAAACTGAAGTTCCTGAGTTGAATCATTTTCTTATGCAGGGCAGTTGCCTTATTTACAGAGACTTTTGAAGCCATCCTCAACGGGCCTTACACAGCCTTACTATCGGTGTCTCCAACAGATGGTACACATACCAACCATAACATCCACTAAATCTTTATGATAATAATTTTGATAAAACACTTGTAATCATTATATTTTCTGAAAAATGTCTTCACTGTATTATCATTTTTTTTTTCCTTTTATAGGGAATTTCCAGTTCAAGGATGTTATTAGCAGATAAATCCGAGGAACCAATTTCATCTCCTCTGACTTCTGCTTTGGCTATAAGCAGTGGAAAAGATGGAGATACAGACCAGAAAGTAGTCTCTAAACCTTCCAAAGTCCAAGCTATATTGAAGGGAATCAAACAGGTGAAATCTTTAGACTCATTCTTGTTGTTACTCACCAAAAGCTGAAGTAAAAAGAGATGAAAGTCATAATGGAGTGAAACTTGCAAATTTTTTGAAGTTTTTGATTTTGTATTTATAGAACTTGATAAAATTTGAAGTTTTTATGATTTTCAATTCATACATTATCAACTTATTATATTTTAGGACAAAAAACACTTTTCATGTTTGAAGTTTGAGTTTGATGTCTACGTGGTCTGTGAAGTTTGAGGTTGTTGCCCATTTGCGCTTCAAAATTTCAAAAGTGACACTTTTAGTCTGTGAGGTTTAGAAAACAGTTCAAAATGGTTCTTGAGCTCATTTGACTGTTGGTTTACTTAGAGAGAGATGATGTCGATGTGCTAATTACTCGCTTGCTCACTGGGTAGATCTTTCTTTCCTATTTTTAGTTGGTCATCACATTTCTCTCTCTTTCCTATTTTTCTTTCTTTTTCTCATTAGCGAACTTTGCTAGCACTGTGTTGACATTCACTGTCCGCTTTCCTATGGCCTCTTTTCTCTTCTCTTTCTTCTTCTAATTTGCCTCCATCAAACGTGCACCACTATCTCCTCTTCCTTGTCTCATCTGCCACTGCCACTTGTTGTAGCTCACGTCTGGAACAACCTTTCGTAGATTTGAAACAAAGTTGAGCTACATGTTGCTGACGAGATGGTAGAAGATGTGACAAAGGGGGAGGGAGATGGTGATCTTTTCATTAGTCAACTTCCAGCCAAATGACCTTAGGGATCATTTTGAACCTTTTCCAAACCTTAGGGACAAGCCTCCTTTGAAACTTTGAGGACCAAGCTGAAATAACCCAAGCCCACCGCTAGCAAATATTGTCCACTTTGGTCCGTTACGTATCGCCATCAACCACACGGTTTTAAAATGCATCTACTAGGGAGAAGTTTTCACACCCTTATAAGAAATGCTTTGTTCCCTCTCCAACCAATGTGAGATCGCACAATCCACCTGCCTTGGGTGCCTAGCATTCTTGCAGGCACACCGGCCGGTGTCTGGCTCTGATACCATTTGTAACAGTCCAAGCCCACCACTAGCTGATATTGTCCACTTTGGCCCGTTGTGTATTGCCGTCAACTTCACGGTTTTGAAACACATCTAATATGGAGAAGTTTCCACACCCTTATAAGAAATGATTCATTCCCTCTCCAACCGATGTGAGATCTCACAAAACAAACATCAAACTCAAACTTCAAGGACCACAAATGTATTTTATACATTGGTTAAGTGCGATAACTCATTTTTTGTTGATTGAAGTAGTTTCCACGAGGTGTTGCAACTCATTTGGTTTGCCTTCTATTTTAAAAGAATTAATATAACTATTACATTTAAATTGTTCTACCAGAGTCCCAAAAAAGTCAACTTGGTTGCTGCTTTAGTTCGAGGCATGCGTGTTGAAGATGCACTGATGCAGTTACAATTGACTGTAAAACGAGCTTCAAAAACTGTTTATCAGGTGAAACACTATCTTACAGTGCTCGATGTACACCTCGTTTACCAACCACTGTGATCGAATATTATTTGATTTCATTATTTGGGATAGTCTGCTAGACTTGAGCATACAAATGCTTGAGTTTAATGAATGATTTTGGAGCGGGAGACCATTTTATTCTTAGAAATTTCAAGTTAATGCGAGTTTCATGTCATAAATTGTTCTCCCATTTCTTTTGCAATATGCAACTCCTTTGGTATTGATAGAAGTTACCGATGATTTAAAAATTTGTGTTGTGACATTTCGAAGGTCATTCACTCAGCCAAAGCAAATGCAACCCACAATCATGGACTGGATTCAGATCGGCTCCTTGTTGGTAAATGAAGCAATCAAAGACACACCATTGGTTATATTTTATGGTTTTGTTTATTTAACTTCACTTCCTGTTATATCTTGTACAGCTGAGGCATTTGTAGGCAAGGGATTATTCAAGAAAAGAATATCATATCATGCCAAAGGAAAATGTGGGATCAAAGTTAGACCAGAATGTCGGCTAACAGTTGTTCTTAGGGAAACAACCCCTGAAGAAGAGGCAGAGATTGCGAAGCTGCGAGTTAGAAAATTCCGCAAGCTTTCCAAGCGTGAAAGTCGACTCGTACCCCATAAGCTTATCGAAACCACACCTATCTGGAACCGAAAGGGCAAAGCTAGAGCAAACGAAGAAGGTCAAATGGCTTCATAATCTCGTCTCTTTCTTCTTGTCATTTCTTACTTTCATGTCCTTTTGTTCTAGACAATGTAGGCAGGATAAGTGATTTTAATGTGGTAGGAACCCAAGGGATAGCTTTTGCACAAGGAAGCCTTTGCTGCAATCACGTTCTGTTGTTTTTCTGGCATTCTTGTATAAAAATCATGTGTCCTCATTTTGTGGAGGATTTTCTTTTATTTCGCTTATACAATCTTCACAACTTTTTTGGATTTGAATGGAAGACTGTCCCCGAAAAATGTAATGACTTGTTTCACTTACATCTTTCTTTTTGGTGACTAATGAAAAAAATTATTCATGTGTTCGAGTTACCGACCAAAATTAAGACCGAATATGATAAATTTATATACATTTTTAATTGTTATATTAATGAAGAGTAATCTATAAGATTTTTGACTAATGACATGTCGACCTTTCGTCCTTCTGTTTTTTAATTCTCCCAGTTGAATTATGATGGATCTCTCAAAATTAGTTGATAAGTGATGGTTTTTAGCGATTCAAGTGATGTTGCCCCATATGCTCGTATAGTTCACTCCATATGCTCGTTTTCTACCAAATTAACATGTCCATAATTGAAAGTACAATTAAGCCACAAAATTAGCACAAAAATATGACTTTAAAATAAGGCGTTTTATAATATGTTTGCTTTAAAACAAGATAGTCGAGAATATATATATATTTTTTTATCATTTATATCTTAAAAAAAAATAATGTTTTTCTTTAAAAATAACATTTAGTTGTGTAATTCTAATAATTTGGAACAATTCTATTCGGGATGATTTGGAAAGGGCACTATTGCAATTTTTAAAGTAATAAATTATATATATATATATATATATATATATTAAAATGTGAAGGATTAAATATAAAAGATTTATAAAATGCACGCTAAATTAGAAGGAAAAAAAAATATTAAAAATAAGAGAAAAAAAAAACATATATTTAGCCAAAATTTAAAATATATTTTGTAATTTAGATAATATATTTTCGTTATAGGGGGAAGTTGTTTGGAGCTTCGGGGCGTTTGGCGTTATTGTGCAGGTTCGGTTTTCATATTCATTGGGGACGAACACCATACCTTTCTTCTGAACATAATCATCAAGCACCAGTAAGCATTCAGTTCTTCCCCAGAACTCTCCATCTCTCTTTATATTCCTGATTAATCTCTCGTTTTGTCCATACCCTTTTCCATTTTTCACTCTTGCAGTTCCCTATCGATCGATTCGCCTCACTGCCATTGATAAAGATCCCGTCTTCTCTTCCGTCCAATCCACTTCTCAGCTTCTTCCCTGCTGAAAATCTTCCCTAA

mRNA sequence

ATGCTGCTTCTTCCTCTAACACTTCCGCGCACTTTCCTCTCCCGATTCTCTGCTCAGTTCAGCTCGCGCCTCTTCTTCCCTCTCGACTTGCGAAGGCCATTTGTCGAATCCCCATCGTTTGCTGGCGATAAAGCAAGAGTGATCGAAGTGTGCAACCATTCCACAACCAGCACGAGTTCTTCCATTACGATCAGATTCATTTCCCGTTTGGTATGGCTTTCGACTTCCGCAGTATTGTTTTTGATCATGGGTGGTTGGCAAAGATGTATTCGGTCCATGCTTGGGCATGTGCAGAAGAGAGTGGAATTGAGTTATAATGCAGCTGTCAACTCTAAATGTTATCGCTCGCAATCCACTCTTTCATATGGGCAGTTGCCTTATTTACAGAGACTTTTGAAGCCATCCTCAACGGGCCTTACACAGCCTTACTATCGGTGTCTCCAACAGATGGGAATTTCCAGTTCAAGGATGTTATTAGCAGATAAATCCGAGGAACCAATTTCATCTCCTCTGACTTCTGCTTTGGCTATAAGCAGTGGAAAAGATGGAGATACAGACCAGAAAGTAGTCTCTAAACCTTCCAAAGTCCAAGCTATATTGAAGGGAATCAAACAGAGTCCCAAAAAAGTCAACTTGGTTGCTGCTTTAGTTCGAGGCATGCGTGTTGAAGATGCACTGATGCAGTTACAATTGACTGTAAAACGAGCTTCAAAAACTGTTTATCAGGTCATTCACTCAGCCAAAGCAAATGCAACCCACAATCATGGACTGGATTCAGATCGGCTCCTTGTTGCTGAGGCATTTGTAGGCAAGGGATTATTCAAGAAAAGAATATCATATCATGCCAAAGGAAAATGTGGGATCAAAGTTAGACCAGAATGTCGGCTAACAGTTGTTCTTAGGGAAACAACCCCTGAAGAAGAGGCAGAGATTGCGAAGCTGCGAGTTAGAAAATTCCGCAAGCTTTCCAAGCGTGAAAGTCGACTCGTACCCCATAAGCTTATCGAAACCACACCTATCTGGAACCGAAAGGGCAAAGCTAGAGCAAACGAAGAAGACAATGTAGGCAGGATAAGTGATTTTAATGTGGTAGGAACCCAAGGGATAGCTTTTGCACAAGGAAGCCTTTGCTGCAATCACGTTCTGTTGTTTTTCTGGCATTCTTGTATAAAAATCATGTGTCCTCATTTTGTGGAGGATTTTCTTTTATTTCGCTTATACAATCTTCACAACTTTTTTGGATTTGAATGGAAGACTGTCCCCGAAAAATGTAATGACTTGTTTCACTTACATCTTTCTTTTTGGTTCGGTTTTCATATTCATTGGGGACGAACACCATACCTTTCTTCTGAACATAATCATCAAGCACCATTCCCTATCGATCGATTCGCCTCACTGCCATTGATAAAGATCCCGTCTTCTCTTCCGTCCAATCCACTTCTCAGCTTCTTCCCTGCTGAAAATCTTCCCTAA

Coding sequence (CDS)

ATGCTGCTTCTTCCTCTAACACTTCCGCGCACTTTCCTCTCCCGATTCTCTGCTCAGTTCAGCTCGCGCCTCTTCTTCCCTCTCGACTTGCGAAGGCCATTTGTCGAATCCCCATCGTTTGCTGGCGATAAAGCAAGAGTGATCGAAGTGTGCAACCATTCCACAACCAGCACGAGTTCTTCCATTACGATCAGATTCATTTCCCGTTTGGTATGGCTTTCGACTTCCGCAGTATTGTTTTTGATCATGGGTGGTTGGCAAAGATGTATTCGGTCCATGCTTGGGCATGTGCAGAAGAGAGTGGAATTGAGTTATAATGCAGCTGTCAACTCTAAATGTTATCGCTCGCAATCCACTCTTTCATATGGGCAGTTGCCTTATTTACAGAGACTTTTGAAGCCATCCTCAACGGGCCTTACACAGCCTTACTATCGGTGTCTCCAACAGATGGGAATTTCCAGTTCAAGGATGTTATTAGCAGATAAATCCGAGGAACCAATTTCATCTCCTCTGACTTCTGCTTTGGCTATAAGCAGTGGAAAAGATGGAGATACAGACCAGAAAGTAGTCTCTAAACCTTCCAAAGTCCAAGCTATATTGAAGGGAATCAAACAGAGTCCCAAAAAAGTCAACTTGGTTGCTGCTTTAGTTCGAGGCATGCGTGTTGAAGATGCACTGATGCAGTTACAATTGACTGTAAAACGAGCTTCAAAAACTGTTTATCAGGTCATTCACTCAGCCAAAGCAAATGCAACCCACAATCATGGACTGGATTCAGATCGGCTCCTTGTTGCTGAGGCATTTGTAGGCAAGGGATTATTCAAGAAAAGAATATCATATCATGCCAAAGGAAAATGTGGGATCAAAGTTAGACCAGAATGTCGGCTAACAGTTGTTCTTAGGGAAACAACCCCTGAAGAAGAGGCAGAGATTGCGAAGCTGCGAGTTAGAAAATTCCGCAAGCTTTCCAAGCGTGAAAGTCGACTCGTACCCCATAAGCTTATCGAAACCACACCTATCTGGAACCGAAAGGGCAAAGCTAGAGCAAACGAAGAAGACAATGTAGGCAGGATAAGTGATTTTAATGTGGTAGGAACCCAAGGGATAGCTTTTGCACAAGGAAGCCTTTGCTGCAATCACGTTCTGTTGTTTTTCTGGCATTCTTGTATAAAAATCATGTGTCCTCATTTTGTGGAGGATTTTCTTTTATTTCGCTTATACAATCTTCACAACTTTTTTGGATTTGAATGGAAGACTGTCCCCGAAAAATGTAATGACTTGTTTCACTTACATCTTTCTTTTTGGTTCGGTTTTCATATTCATTGGGGACGAACACCATACCTTTCTTCTGAACATAATCATCAAGCACCATTCCCTATCGATCGATTCGCCTCACTGCCATTGATAAAGATCCCGTCTTCTCTTCCGTCCAATCCACTTCTCAGCTTCTTCCCTGCTGAAAATCTTCCCTAA

Protein sequence

MLLLPLTLPRTFLSRFSAQFSSRLFFPLDLRRPFVESPSFAGDKARVIEVCNHSTTSTSSSITIRFISRLVWLSTSAVLFLIMGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQPYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRLLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKLSKRESRLVPHKLIETTPIWNRKGKARANEEDNVGRISDFNVVGTQGIAFAQGSLCCNHVLLFFWHSCIKIMCPHFVEDFLLFRLYNLHNFFGFEWKTVPEKCNDLFHLHLSFWFGFHIHWGRTPYLSSEHNHQAPFPIDRFASLPLIKIPSSLPSNPLLSFFPAENLP

Homology

[Close]

BLAST of CmaCh06G000900 vs. ExPASy Swiss-Prot
Match: Q92QG5 (50S ribosomal protein L22 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=rplV PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.6e-19
Identity = 53/118 (44.92%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 192 KPSKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANA 251
           K ++ QA+ + I+ SP+K+NLVAAL+RG +V+ AL +L+ + KR + TV + + SA ANA
Sbjct: 11  KDNEAQAVARTIRVSPQKLNLVAALIRGKKVDRALAELEFSRKRIAGTVKKTLESAIANA 70

Query: 252 THNHGLDSDRLLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEA 310
            +NH LD D L+VAEAFVGK +  KR     +G+     +P   LT+V+RE   + EA
Sbjct: 71  ENNHDLDVDSLIVAEAFVGKSIVMKRFHARGRGRASRVEKPFAHLTIVVREVEAKGEA 128

[Close]

BLAST of CmaCh06G000900 vs. ExPASy Swiss-Prot
Match: A6U864 (50S ribosomal protein L22 OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=rplV PE=3 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 3.6e-19
Identity = 53/118 (44.92%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 192 KPSKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANA 251
           K ++ QA+ + I+ SP+K+NLVAAL+RG +V+ AL +L+ + KR + TV + + SA ANA
Sbjct: 11  KDNEAQAVARTIRVSPQKLNLVAALIRGKKVDRALAELEFSRKRIAGTVRKTLESAIANA 70

Query: 252 THNHGLDSDRLLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEA 310
            +NH LD D L+VAEAFVGK +  KR     +G+     +P   LT+V+RE   + EA
Sbjct: 71  ENNHDLDVDSLIVAEAFVGKSIVMKRFHARGRGRASRVEKPFAHLTIVVREVEAKGEA 128

[Close]

BLAST of CmaCh06G000900 vs. ExPASy Swiss-Prot
Match: Q0ANQ5 (50S ribosomal protein L22 OS=Maricaulis maris (strain MCS10) OX=394221 GN=rplV PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 4.6e-19
Identity = 54/109 (49.54%), Postives = 76/109 (69.72%), Query Frame = 0


Query: 194 SKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATH 253
           ++ +A L+ I+ SP+K+NLVAAL+RG +VE AL  L+ + KR SK V + + SA ANA +
Sbjct: 13  NEARAKLRMIRTSPQKLNLVAALIRGKKVERALADLEFSRKRISKEVKKTLESAIANAEN 72

Query: 254 NHGLDSDRLLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRE 303
           NHGLD D L+V+EAFVGK L  KR    A+G+    ++P   LT+V+RE
Sbjct: 73  NHGLDIDSLVVSEAFVGKNLVMKRFRARARGRGAKILKPFSELTIVVRE 121

[Close]

BLAST of CmaCh06G000900 vs. ExPASy Swiss-Prot
Match: Q8UE23 (50S ribosomal protein L22 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=rplV PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.3e-18
Identity = 52/118 (44.07%), Postives = 78/118 (66.10%), Query Frame = 0


Query: 192 KPSKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANA 251
           K ++ QAI + ++ SP+K+NLVAAL+RG +V+ AL +L+ + KR + TV + + SA ANA
Sbjct: 11  KDNEAQAIARTLRVSPQKLNLVAALIRGKKVDRALAELEFSRKRIAGTVKKTLESAIANA 70

Query: 252 THNHGLDSDRLLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEA 310
            +NH LD D L+VAEA+VGK +  KR     +G+     +P   LT+V+RE   + EA
Sbjct: 71  ENNHDLDVDALVVAEAYVGKSITMKRFHARGRGRASRIEKPFAHLTIVVREVEEKGEA 128

[Close]

BLAST of CmaCh06G000900 vs. ExPASy Swiss-Prot
Match: Q98N52 (50S ribosomal protein L22 OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=rplV PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 2.3e-18
Identity = 52/116 (44.83%), Postives = 76/116 (65.52%), Query Frame = 0


Query: 194 SKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATH 253
           ++ +A+L+ I+ SP+K+NLVAAL+RG +V  AL  L+ + KR S TV + + SA ANA +
Sbjct: 13  NEARAVLRTIRISPQKLNLVAALIRGKKVATALSDLEFSAKRISGTVKKTLESAIANAEN 72

Query: 254 NHGLDSDRLLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEA 310
           NH LD D L+VAEA+VGK +  KR     +G+     +P   LT+V+RE   + EA
Sbjct: 73  NHDLDVDALVVAEAYVGKSIVMKRFHARGRGRASRIEKPFSHLTIVVREVEEKGEA 128

[Close]

BLAST of CmaCh06G000900 vs. ExPASy TrEMBL
Match: A0A6J1I573 (50S ribosomal protein L22, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470023 PE=3 SV=1)

HSP 1 Score: 519.2 bits (1336), Expect = 1.8e-143
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 83  MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 142
           MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 143 YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 202
           YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 120

Query: 203 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 262
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 180

Query: 263 LVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 322
           LVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL
Sbjct: 181 LVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 240

Query: 323 SKRESRLVPHKLIETTPIWNRKGKARANEE 353
           SKRESRLVPHKLIETTPIWNRKGKARANEE
Sbjct: 241 SKRESRLVPHKLIETTPIWNRKGKARANEE 270

[Close]

BLAST of CmaCh06G000900 vs. ExPASy TrEMBL
Match: A0A6J1GU02 (50S ribosomal protein L22, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457075 PE=3 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 5.9e-142
Identity = 267/270 (98.89%), Postives = 267/270 (98.89%), Query Frame = 0


Query: 83  MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 142
           MGGWQRCIRSMLGHVQKRVELSYNAA NS CYRSQSTLSYGQLPYLQRLLKPSSTGLTQP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 143 YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 202
           YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 120

Query: 203 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 262
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 180

Query: 263 LVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 322
           LVAEAFVGKG FKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL
Sbjct: 181 LVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 240

Query: 323 SKRESRLVPHKLIETTPIWNRKGKARANEE 353
           SKRESRLVPHKLIETTPIWNRKGKARANEE
Sbjct: 241 SKRESRLVPHKLIETTPIWNRKGKARANEE 270

[Close]

BLAST of CmaCh06G000900 vs. ExPASy TrEMBL
Match: A0A6J1DVK1 (50S ribosomal protein L22, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024848 PE=3 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 1.3e-128
Identity = 244/271 (90.04%), Postives = 256/271 (94.46%), Query Frame = 0


Query: 83  MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 142
           M GWQR +RSMLGHVQKRVELSYN A NS CYR QS+LSYG+LPYLQRLLKPSS G+TQP
Sbjct: 1   MVGWQRYVRSMLGHVQKRVELSYNVAANSNCYRLQSSLSYGELPYLQRLLKPSSAGITQP 60

Query: 143 YYRCLQQMGISSSRMLLADKSEE-PISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILK 202
           YY+CLQQMGISSSR LLADKSEE  +SSPLTSALA+SSGK+GD DQKVVSKPSKVQAILK
Sbjct: 61  YYQCLQQMGISSSRFLLADKSEEAAVSSPLTSALALSSGKEGDKDQKVVSKPSKVQAILK 120

Query: 203 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 262
           GIKQSPKKVNLVAALVRGMRVEDAL+QLQLTVKRASKTVYQVIHSAKANATHNHG+DSDR
Sbjct: 121 GIKQSPKKVNLVAALVRGMRVEDALLQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDR 180

Query: 263 LLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 322
           LLVAEAFVGKG FKKRISYHAKGKCGIKVRPECRLTVV+RE TPEEEAEIAKLRV  FRK
Sbjct: 181 LLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVVREITPEEEAEIAKLRVSNFRK 240

Query: 323 LSKRESRLVPHKLIETTPIWNRKGKARANEE 353
           L+KRESRLVPHKLIETTPIWNRKGKARANEE
Sbjct: 241 LTKRESRLVPHKLIETTPIWNRKGKARANEE 271

[Close]

BLAST of CmaCh06G000900 vs. ExPASy TrEMBL
Match: A0A1S4E5G5 (50S ribosomal protein L22, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107992071 PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 5.4e-119
Identity = 229/271 (84.50%), Postives = 251/271 (92.62%), Query Frame = 0


Query: 83  MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 142
           M  WQRC+RS+LGH+Q +VELSYNAA NS  YR QS+LS G+LPYLQRLLKPSS G+ QP
Sbjct: 1   MVSWQRCLRSILGHLQNKVELSYNAASNSS-YRLQSSLSNGELPYLQRLLKPSSAGIAQP 60

Query: 143 YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGD-TDQKVVSKPSKVQAILK 202
            +RCLQQMGISSSRMLLADK EE +SSPLTSALA+SSGKDGD TDQKVV K SKVQA+LK
Sbjct: 61  DFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVVCKRSKVQAVLK 120

Query: 203 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 262
           GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHG+D+DR
Sbjct: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDADR 180

Query: 263 LLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 322
           LLVAEAFVGKGLF+KR+SYHAKG+CGI+V+PECRLTVVLRETTPEEEA+IAKL+V  FRK
Sbjct: 181 LLVAEAFVGKGLFRKRLSYHAKGRCGIEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRK 240

Query: 323 LSKRESRLVPHKLIETTPIWNRKGKARANEE 353
           L+KRE+RLVPHKLIETTPIWNRKGKARA  E
Sbjct: 241 LTKRENRLVPHKLIETTPIWNRKGKARATTE 270

[Close]

BLAST of CmaCh06G000900 vs. ExPASy TrEMBL
Match: A0A0A0LVB7 (50S ribosomal protein L22, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G153000 PE=3 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-118
Identity = 227/271 (83.76%), Postives = 251/271 (92.62%), Query Frame = 0


Query: 83  MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 142
           M GWQRC+RSMLGH+Q +VELSYNAA NS  YR QS+LS G+LPYLQRLLKPSS  + QP
Sbjct: 1   MVGWQRCLRSMLGHLQNKVELSYNAASNSS-YRLQSSLSNGELPYLQRLLKPSSAVIAQP 60

Query: 143 YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGD-TDQKVVSKPSKVQAILK 202
            +RCLQQMGISSSRMLLADK EE +SSPLTSALA+SSGKDGD TDQKV+ K S+VQA+LK
Sbjct: 61  DFRCLQQMGISSSRMLLADKPEEAVSSPLTSALALSSGKDGDKTDQKVICKRSQVQAVLK 120

Query: 203 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 262
           GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHG+DSDR
Sbjct: 121 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGMDSDR 180

Query: 263 LLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 322
           LLVAEAFVGKGLF+KR+SYHAKG+CG++V+PECRLTVVLRETTPEEEA+IAKL+V  FRK
Sbjct: 181 LLVAEAFVGKGLFRKRLSYHAKGRCGVEVKPECRLTVVLRETTPEEEAKIAKLKVSNFRK 240

Query: 323 LSKRESRLVPHKLIETTPIWNRKGKARANEE 353
           L+KRE +LVPHKLIETTPIWNRKGKA+AN E
Sbjct: 241 LTKREHQLVPHKLIETTPIWNRKGKAKANTE 270

[Close]

BLAST of CmaCh06G000900 vs. NCBI nr
Match: KAG6596231.1 (hypothetical protein SDJN03_09411, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 564.7 bits (1454), Expect = 7.8e-157
Identity = 305/350 (87.14%), Postives = 313/350 (89.43%), Query Frame = 0


Query: 33  PFVESPSFAGDKARVIEVCNHSTTSTSSSITIRFISRLVWLSTSAVLFLIMGGWQRCIRS 92
           PFVESPSFAGDKARVIEVCNHS    +  + +R  S  VW  TSAV F IMGGWQRCIRS
Sbjct: 3   PFVESPSFAGDKARVIEVCNHS--QPARVLPLRSDSFPVW--TSAVFFFIMGGWQRCIRS 62

Query: 93  MLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQPYYRCLQQMGI 152
           MLGHVQKRVELSYNAA NS CYRSQSTLSYGQLPYLQRLLKPSSTGLTQPYYRCLQQMGI
Sbjct: 63  MLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQPYYRCLQQMGI 122

Query: 153 SSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKGIKQSPKKVNL 212
           SSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKGIKQSPKKVNL
Sbjct: 123 SSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKGIKQSPKKVNL 182

Query: 213 VAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRLLVAEAFVGKG 272
           VAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRLLVAEAFVGKG
Sbjct: 183 VAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRLLVAEAFVGKG 242

Query: 273 LFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKLSKRESRLVPH 332
            FKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKLSKRESRLVPH
Sbjct: 243 FFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKLSKRESRLVPH 302

Query: 333 KLIETTPIWNRKGKARANEEDNVGRISDFNVVGTQGIAFAQGSLCCNHVL 383
           KLIETTPIWNRKGKARANEE +V     F  +G +   F    +  +H L
Sbjct: 303 KLIETTPIWNRKGKARANEEGSV-----FIFIGDEHHTFLPNIIIKHHSL 343

[Close]

BLAST of CmaCh06G000900 vs. NCBI nr
Match: KAG7027774.1 (rplV [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 523.1 bits (1346), Expect = 2.6e-144
Identity = 277/293 (94.54%), Postives = 279/293 (95.22%), Query Frame = 0


Query: 60  SSITIRFISRLVWLSTSAVLFLIMGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQST 119
           S IT+ F    +   TSAV F IMGGWQRCIRSMLGHVQKRVELSYNAA NS CYRSQST
Sbjct: 38  SKITLSF---FLVFRTSAVFFFIMGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQST 97

Query: 120 LSYGQLPYLQRLLKPSSTGLTQPYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISS 179
           LSYGQLPYLQRLLKPSSTGLTQPYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISS
Sbjct: 98  LSYGQLPYLQRLLKPSSTGLTQPYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISS 157

Query: 180 GKDGDTDQKVVSKPSKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKT 239
           GKDGDTDQKVVSKPSKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKT
Sbjct: 158 GKDGDTDQKVVSKPSKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKT 217

Query: 240 VYQVIHSAKANATHNHGLDSDRLLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVV 299
           VYQVIHSAKANATHNHGLDSDRLLVAEAFVGKG FKKRISYHAKGKCGIKVRPECRLTVV
Sbjct: 218 VYQVIHSAKANATHNHGLDSDRLLVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVV 277

Query: 300 LRETTPEEEAEIAKLRVRKFRKLSKRESRLVPHKLIETTPIWNRKGKARANEE 353
           LRETTPEEEAEIAKLRVRKFRKLSKRESRLVPHKLIETTPIWNRKGKARANEE
Sbjct: 278 LRETTPEEEAEIAKLRVRKFRKLSKRESRLVPHKLIETTPIWNRKGKARANEE 327

[Close]

BLAST of CmaCh06G000900 vs. NCBI nr
Match: XP_022971240.1 (uncharacterized protein LOC111470023 [Cucurbita maxima])

HSP 1 Score: 519.2 bits (1336), Expect = 3.8e-143
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 83  MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 142
           MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 143 YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 202
           YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 120

Query: 203 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 262
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 180

Query: 263 LVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 322
           LVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL
Sbjct: 181 LVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 240

Query: 323 SKRESRLVPHKLIETTPIWNRKGKARANEE 353
           SKRESRLVPHKLIETTPIWNRKGKARANEE
Sbjct: 241 SKRESRLVPHKLIETTPIWNRKGKARANEE 270

[Close]

BLAST of CmaCh06G000900 vs. NCBI nr
Match: XP_022955020.1 (uncharacterized protein LOC111457075 [Cucurbita moschata])

HSP 1 Score: 514.2 bits (1323), Expect = 1.2e-141
Identity = 267/270 (98.89%), Postives = 267/270 (98.89%), Query Frame = 0


Query: 83  MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 142
           MGGWQRCIRSMLGHVQKRVELSYNAA NS CYRSQSTLSYGQLPYLQRLLKPSSTGLTQP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 143 YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 202
           YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 120

Query: 203 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 262
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 180

Query: 263 LVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 322
           LVAEAFVGKG FKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL
Sbjct: 181 LVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 240

Query: 323 SKRESRLVPHKLIETTPIWNRKGKARANEE 353
           SKRESRLVPHKLIETTPIWNRKGKARANEE
Sbjct: 241 SKRESRLVPHKLIETTPIWNRKGKARANEE 270

[Close]

BLAST of CmaCh06G000900 vs. NCBI nr
Match: XP_023540568.1 (uncharacterized protein LOC111800895 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 514.2 bits (1323), Expect = 1.2e-141
Identity = 267/270 (98.89%), Postives = 267/270 (98.89%), Query Frame = 0


Query: 83  MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 142
           MGGWQRCIRSMLGHVQKRVELSYNAA NS CYRSQSTLSYGQLPYLQRLLKPSSTGLTQP
Sbjct: 1   MGGWQRCIRSMLGHVQKRVELSYNAAANSNCYRSQSTLSYGQLPYLQRLLKPSSTGLTQP 60

Query: 143 YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 202
           YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG
Sbjct: 61  YYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILKG 120

Query: 203 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 262
           IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL
Sbjct: 121 IKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDRL 180

Query: 263 LVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 322
           LVAEAFVGKG FKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL
Sbjct: 181 LVAEAFVGKGFFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRKL 240

Query: 323 SKRESRLVPHKLIETTPIWNRKGKARANEE 353
           SKRESRLVPHKLIETTPIWNRKGKARANEE
Sbjct: 241 SKRESRLVPHKLIETTPIWNRKGKARANEE 270

[Close]

BLAST of CmaCh06G000900 vs. TAIR 10
Match: AT4G28360.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 299.7 bits (766), Expect = 4.4e-81
Identity = 168/274 (61.31%), Postives = 214/274 (78.10%), Query Frame = 0


Query: 83  MGGWQRCIRSMLGHVQKRVELSYNAAVN--SKCYRSQSTLSYGQLPYLQRLLKPSSTGLT 142
           M GW+R +++++  V +RV+ S+ +  N  S     +S  S G   YLQ LL+PS +  +
Sbjct: 1   MVGWKRNLQTVIRQVGRRVKNSHISTANYSSSTRNLESPFSQG---YLQSLLRPSYS--S 60

Query: 143 QPYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAIL 202
           +P Y  LQQ+GIS+SR L A  SEEP+SSPL+S   + SGK  + +QK++ K  KVQA+L
Sbjct: 61  RPLYHHLQQLGISTSRQLQA--SEEPVSSPLSSPALLGSGK--EEEQKIIPKRQKVQAVL 120

Query: 203 KGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSD 262
           K IKQSPKKVNLVAALVRGMRVEDAL+QLQ+TVKRA++TVY+VIH+A+ANATHNHGLD D
Sbjct: 121 KSIKQSPKKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVIHAARANATHNHGLDPD 180

Query: 263 RLLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFR 322
           RLLVAEAFVGKGLF K+++YHAKG+ GI   P CRLTV++RETTPEEEAEIA+L+V  F+
Sbjct: 181 RLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTPEEEAEIARLKVHNFK 240

Query: 323 KLSKRESRLVPHKLIETTPIWNRKGKARANEEDN 355
           K SKRE +LVPHKLIET+PIWNR+G  +AN   +
Sbjct: 241 KKSKRERQLVPHKLIETSPIWNRRG-TKANHRSS 264

[Close]

BLAST of CmaCh06G000900 vs. TAIR 10
Match: AT1G52370.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 296.6 bits (758), Expect = 3.7e-80
Identity = 166/264 (62.88%), Postives = 208/264 (78.79%), Query Frame = 0


Query: 83  MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRS-QSTLSYGQLPYLQRLLKPSSTGLTQ 142
           M GWQ+ ++ ++  V KRV+ S+ +  N    R+ +S  S G   YLQ LL+  ST  ++
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQG---YLQSLLR--STYSSR 60

Query: 143 PYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILK 202
           P Y  LQQ+GIS+SR L A   EEP+SSPL+S   + SGK  + +QK++ K  KVQA+LK
Sbjct: 61  PLYYHLQQLGISTSRQLQA--GEEPVSSPLSSPALLGSGK--EEEQKIIPKRQKVQAVLK 120

Query: 203 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 262
            IKQSPKKVNLVAALVRGMRVEDALMQLQ+TVKRAS+TVY+VIH+A+ANATHNHGLD DR
Sbjct: 121 SIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPDR 180

Query: 263 LLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 322
           LLVAEAFVGKGLF K+++YHAKG+ GI   P CRLTV++RETT EEEAEIA+L+V  F+K
Sbjct: 181 LLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFKK 240

Query: 323 LSKRESRLVPHKLIETTPIWNRKG 346
           L+KR+ +LVPHKLIET+PIWNR+G
Sbjct: 241 LNKRQRQLVPHKLIETSPIWNRRG 255

[Close]

BLAST of CmaCh06G000900 vs. TAIR 10
Match: AT1G52370.2 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 296.6 bits (758), Expect = 3.7e-80
Identity = 166/264 (62.88%), Postives = 208/264 (78.79%), Query Frame = 0


Query: 83  MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRS-QSTLSYGQLPYLQRLLKPSSTGLTQ 142
           M GWQ+ ++ ++  V KRV+ S+ +  N    R+ +S  S G   YLQ LL+  ST  ++
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQG---YLQSLLR--STYSSR 60

Query: 143 PYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILK 202
           P Y  LQQ+GIS+SR L A   EEP+SSPL+S   + SGK  + +QK++ K  KVQA+LK
Sbjct: 61  PLYYHLQQLGISTSRQLQA--GEEPVSSPLSSPALLGSGK--EEEQKIIPKRQKVQAVLK 120

Query: 203 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 262
            IKQSPKKVNLVAALVRGMRVEDALMQLQ+TVKRAS+TVY+VIH+A+ANATHNHGLD DR
Sbjct: 121 SIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPDR 180

Query: 263 LLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 322
           LLVAEAFVGKGLF K+++YHAKG+ GI   P CRLTV++RETT EEEAEIA+L+V  F+K
Sbjct: 181 LLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFKK 240

Query: 323 LSKRESRLVPHKLIETTPIWNRKG 346
           L+KR+ +LVPHKLIET+PIWNR+G
Sbjct: 241 LNKRQRQLVPHKLIETSPIWNRRG 255

[Close]

BLAST of CmaCh06G000900 vs. TAIR 10
Match: AT1G52370.3 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 296.6 bits (758), Expect = 3.7e-80
Identity = 166/264 (62.88%), Postives = 208/264 (78.79%), Query Frame = 0


Query: 83  MGGWQRCIRSMLGHVQKRVELSYNAAVNSKCYRS-QSTLSYGQLPYLQRLLKPSSTGLTQ 142
           M GWQ+ ++ ++  V KRV+ S+ +  N    R+ +S  S G   YLQ LL+  ST  ++
Sbjct: 1   MAGWQKNLQIVIRQVGKRVKDSHISTANYSSTRNLESPFSQG---YLQSLLR--STYSSR 60

Query: 143 PYYRCLQQMGISSSRMLLADKSEEPISSPLTSALAISSGKDGDTDQKVVSKPSKVQAILK 202
           P Y  LQQ+GIS+SR L A   EEP+SSPL+S   + SGK  + +QK++ K  KVQA+LK
Sbjct: 61  PLYYHLQQLGISTSRQLQA--GEEPVSSPLSSPALLGSGK--EEEQKIIPKRQKVQAVLK 120

Query: 203 GIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATHNHGLDSDR 262
            IKQSPKKVNLVAALVRGMRVEDALMQLQ+TVKRAS+TVY+VIH+A+ANATHNHGLD DR
Sbjct: 121 SIKQSPKKVNLVAALVRGMRVEDALMQLQVTVKRASQTVYRVIHAARANATHNHGLDPDR 180

Query: 263 LLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAKLRVRKFRK 322
           LLVAEAFVGKGLF K+++YHAKG+ GI   P CRLTV++RETT EEEAEIA+L+V  F+K
Sbjct: 181 LLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTAEEEAEIARLKVHNFKK 240

Query: 323 LSKRESRLVPHKLIETTPIWNRKG 346
           L+KR+ +LVPHKLIET+PIWNR+G
Sbjct: 241 LNKRQRQLVPHKLIETSPIWNRRG 255

[Close]

BLAST of CmaCh06G000900 vs. TAIR 10
Match: ATCG00810.1 (ribosomal protein L22 )

HSP 1 Score: 59.7 bits (143), Expect = 7.6e-09
Identity = 41/151 (27.15%), Postives = 78/151 (51.66%), Query Frame = 0


Query: 194 SKVQAILKGIKQSPKKVNLVAALVRGMRVEDALMQLQLTVKRASKTVYQVIHSAKANATH 253
           ++V A+ + I  S  K   V   +RG   E+ALM L+L   R    ++++++SA ANA+H
Sbjct: 11  TEVYALGQYISMSAHKARRVIDQIRGRSYEEALMILELMPYRGCYPIFKLVYSAAANASH 70

Query: 254 NHGLDSDRLLVAEAFVGKGLFKKRISYHAKGKCGIKVRPECRLTVVLRETTPEEEAEIAK 313
           N G     L++++A V +G   K++   A+G+     R  C +T+VL + +  ++ E   
Sbjct: 71  NKGFKETNLVISKAEVNQGNTVKKLKPRARGRSYPIKRSTCHITIVLEDISFYQQYEEYL 130

Query: 314 LRVRKFRKLSKRESRLVPHKLIETTPIWNRK 345
           + ++K    S     L  +    +  +W++K
Sbjct: 131 MYLKK-PGCSNENRNLTCYDTYSSGGLWDKK 160

The following BLAST results are available for this feature:

BLAST of CmaCh06G000900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q92QG5	3.6e-19	44.92	50S ribosomal protein L22 OS=Rhizobium meliloti (strain 1021) OX=266834 GN=rplV ...	[more]
A6U864	3.6e-19	44.92	50S ribosomal protein L22 OS=Sinorhizobium medicae (strain WSM419) OX=366394 GN=...	[more]
Q0ANQ5	4.6e-19	49.54	50S ribosomal protein L22 OS=Maricaulis maris (strain MCS10) OX=394221 GN=rplV P...	[more]
Q8UE23	2.3e-18	44.07	50S ribosomal protein L22 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=1...	[more]
Q98N52	2.3e-18	44.83	50S ribosomal protein L22 OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 91...	[more]

BLAST of CmaCh06G000900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I573	1.8e-143	100.00	50S ribosomal protein L22, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1GU02	5.9e-142	98.89	50S ribosomal protein L22, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1DVK1	1.3e-128	90.04	50S ribosomal protein L22, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A1S4E5G5	5.4e-119	84.50	50S ribosomal protein L22, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107992071...	[more]
A0A0A0LVB7	2.0e-118	83.76	50S ribosomal protein L22, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G153...	[more]

BLAST of CmaCh06G000900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6596231.1	7.8e-157	87.14	hypothetical protein SDJN03_09411, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7027774.1	2.6e-144	94.54	rplV [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022971240.1	3.8e-143	100.00	uncharacterized protein LOC111470023 [Cucurbita maxima]	[more]
XP_022955020.1	1.2e-141	98.89	uncharacterized protein LOC111457075 [Cucurbita moschata]	[more]
XP_023540568.1	1.2e-141	98.89	uncharacterized protein LOC111800895 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh06G000900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28360.1	4.4e-81	61.31	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.1	3.7e-80	62.88	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.2	3.7e-80	62.88	Ribosomal protein L22p/L17e family protein	[more]
AT1G52370.3	3.7e-80	62.88	Ribosomal protein L22p/L17e family protein	[more]
ATCG00810.1	7.6e-09	27.15	ribosomal protein L22	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	TIGRFAM	TIGR01044	TIGR01044	coord: 199..299 e-value: 7.2E-23 score: 78.8
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	PANTHER	PTHR13501	CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED	coord: 117..340
IPR005727	Ribosomal protein L22, bacterial/chloroplast-type	HAMAP	MF_01331_B	Ribosomal_L22_B	coord: 194..303 score: 20.380047
IPR036394	Ribosomal protein L22/L17 superfamily	GENE3D	3.90.470.10	Ribosomal protein L22/L17	coord: 181..334 e-value: 8.5E-48 score: 164.1
IPR036394	Ribosomal protein L22/L17 superfamily	SUPERFAMILY	54843	Ribosomal protein L22	coord: 188..303
IPR001063	Ribosomal protein L22/L17	PFAM	PF00237	Ribosomal_L22	coord: 200..301 e-value: 2.4E-25 score: 88.8
IPR001063	Ribosomal protein L22/L17	CDD	cd00336	Ribosomal_L22	coord: 196..300 e-value: 3.3635E-36 score: 127.607
None	No IPR available	PANTHER	PTHR13501:SF8	39S RIBOSOMAL PROTEIN L22, MITOCHONDRIAL	coord: 117..340

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G000900.1	CmaCh06G000900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042255	ribosome assembly
biological_process	GO:0006412	translation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome