CmaCh05G013460 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G013460
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	cyclin-dependent kinase F-1
Location	Cma_Chr05: 10166568 .. 10168775 (-)
RNA-Seq Expression	CmaCh05G013460
Synteny	CmaCh05G013460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTAATCACGGCGGCATTTCCCTTCGGTTGTTCACCGTCCGGCGACTTGTTCCTTTTCACCTTCCGGCGAAAATTAACTGTAACTGTAAGGATTTTCCATAACCCCTTTCTTCAAAAACCCTAGAACGCACACTCCAAAATCGTTCACAAATGGAACCTCCACCGGCCAAGAGCTGGAGCATCCACACTCGGCCGGATATCATCCAGAAGTACCAGATCCTCGAGCGAGTCGGATCCGGTGCTTATTCCGATGTTCACCGTGCGCGACGGCTCTCCGACGGCGTCATCGTCGCTTTGAAGGAGATCCACGATTATCAATCGGCGTTCCGCGAAATCGAGGCGCTCCAAATCCTTCAAGGTTCGCCTAATATCGTCGTTCTGCACGAGTACTTTTGGCGCGAAGATGAAGATGCCGTGCTTGTTCTCGAGTTTATGAGAACGGATTTGGCCACCGTTATAGCGGAGGCGAAGAAGCGAGGGTCGGACGGGGTAGAATCCGGGCGTGGGCTAGCGGTCGGTGAGGTGAAGCGGTGGATGATCCAGATTTTGAGTGGTCTTGATGCTTGTCATAGGAATATGATCGTGCATAGGGATTTGAAACCTAGCAATTTGTTGATATCCGATGATGGCGTGCTCAAGCTTGCCGATTTTGGACAGGTTATTCTCTTTCAATCTTCTTTTTAGTATAAGATCCGCAAGGAAAGAGCTTACCGAATATAATTACAGTCGAATGTGGAGATTCTTTACACACTCTGTTCCTCAAATTTAGCTCGTTTTTGTGAGGAACCACTTTGAAAGGTCCATTCAACTCATTGCTTGTAGATTGTTCCCCGCAGAATTTTGAGAGAAGTAACCTGAAATTTTGATTAAATGCAGTATTCATCTGTTCATATTGAAGGTTTTTTATCTTTTTTTTAATACCAAATTCTAGCAGAAGATCCATGATGCTGAATTTTACTTGATATGCTGTAGGTGTGATTTCTGGACATTGATGCTTCTGTTCTTACCCGTTTTCTAACCATTTGGTTTTTCTTTTTGAAAATCAAGCTTATGAACAATATTTCCACCTAGGAATTTTTTGTTTTTGTTTTGTCATCTACTTTCTATGTTTTGAATTTCAAGCACAAAAAACCAAATGGTTATCAAAATGAAGATCGTTGTAAATAATTTCAAAAACTAAATGGTTATCAATGTTTTGAATCTGGAGTAAGAGTATGATATTGGTTTCTTGTTCATAAAAGAATGAGTTTGATGTTGGTTTTCAGGCAAGAATACTCATGGAGCCTGAATATGTTGAACCAAATGGGATCTCTCAACCATGTGAGATGAACTCTTCAGATCAAGTACCTGCTTCTCAGCCCTCTGCAATTTTTCCTGGAACGGAAAGCTCGGTTCGAGAAGGTAACAGAACTGAAGAGCAAGAACCAATTGGCAAGGAGGAATATTTTAGCGATTTAGGCGAGCTGAAAGCAAAAAATTCAGCAAATGAATTTGACAAGGAAACATATACTTATGATGGAGATACATCTTGCTTAGCAACATGTACCACGAGTGACCTTGAAGATGATCCATTTAAAGGTTCATCATATTCTTATGAAACTGAAGGAGGAGTTCCAGCAGATGATAGCCAAGGTTCGCTCACTTCATCCGTCGGTACTCGCTGGTTCAGGGCCCCCGAATTACTCTATGGCTCAACGAGCTACGGTTTGGAGATCGACTTATGGTCGTTGGGCTGCATTTTTGCTGAACTTTTTACATTGGAACCCCTTTTTCCAGGAACTGCTGACATTGATCAAATGAGCAAAATTTTCACTACTCTTGGCAACTTGACTGAAGATTCATGGCCAGGTTGTTCTGAACTTCCTGATTTCCATATTATATCATTCAACACAATAGAAAAGCCAATCGGTTTAGAAGCATGTCTTCCCAACTGCTCTCCTGATGAAATTTCTATTGTTAAAAGACTGCTTTGTTACGACCCGGCTAATCGAGCGACCGCTATGGAATTGCTCCAAGATAAGTATTTCACTGAGGATCCATTCCCAGTTCCGTTGGCTGAGCTTCGTGTTCCTTTGACCAGAAGTGGACAGGACGAGGATTCTCCTGCTGGATGGTACGATTACGATGAGTCCGATTCCGATATGGATGAACTCGGCCCCATGAACGTTACCACCAGTGCCACTGGTTACTCCATACAATTTGATTGA

mRNA sequence

AATTAATCACGGCGGCATTTCCCTTCGGTTGTTCACCGTCCGGCGACTTGTTCCTTTTCACCTTCCGGCGAAAATTAACTGTAACTGTAAGGATTTTCCATAACCCCTTTCTTCAAAAACCCTAGAACGCACACTCCAAAATCGTTCACAAATGGAACCTCCACCGGCCAAGAGCTGGAGCATCCACACTCGGCCGGATATCATCCAGAAGTACCAGATCCTCGAGCGAGTCGGATCCGGTGCTTATTCCGATGTTCACCGTGCGCGACGGCTCTCCGACGGCGTCATCGTCGCTTTGAAGGAGATCCACGATTATCAATCGGCGTTCCGCGAAATCGAGGCGCTCCAAATCCTTCAAGGTTCGCCTAATATCGTCGTTCTGCACGAGTACTTTTGGCGCGAAGATGAAGATGCCGTGCTTGTTCTCGAGTTTATGAGAACGGATTTGGCCACCGTTATAGCGGAGGCGAAGAAGCGAGGGTCGGACGGGGTAGAATCCGGGCGTGGGCTAGCGGTCGGTGAGGTGAAGCGGTGGATGATCCAGATTTTGAGTGGTCTTGATGCTTGTCATAGGAATATGATCGTGCATAGGGATTTGAAACCTAGCAATTTGTTGATATCCGATGATGGCGTGCTCAAGCTTGCCGATTTTGGACAGGCAAGAATACTCATGGAGCCTGAATATGTTGAACCAAATGGGATCTCTCAACCATGTGAGATGAACTCTTCAGATCAAGTACCTGCTTCTCAGCCCTCTGCAATTTTTCCTGGAACGGAAAGCTCGGTTCGAGAAGGTAACAGAACTGAAGAGCAAGAACCAATTGGCAAGGAGGAATATTTTAGCGATTTAGGCGAGCTGAAAGCAAAAAATTCAGCAAATGAATTTGACAAGGAAACATATACTTATGATGGAGATACATCTTGCTTAGCAACATGTACCACGAGTGACCTTGAAGATGATCCATTTAAAGGTTCATCATATTCTTATGAAACTGAAGGAGGAGTTCCAGCAGATGATAGCCAAGGTTCGCTCACTTCATCCGTCGGTACTCGCTGGTTCAGGGCCCCCGAATTACTCTATGGCTCAACGAGCTACGGTTTGGAGATCGACTTATGGTCGTTGGGCTGCATTTTTGCTGAACTTTTTACATTGGAACCCCTTTTTCCAGGAACTGCTGACATTGATCAAATGAGCAAAATTTTCACTACTCTTGGCAACTTGACTGAAGATTCATGGCCAGGTTGTTCTGAACTTCCTGATTTCCATATTATATCATTCAACACAATAGAAAAGCCAATCGGTTTAGAAGCATGTCTTCCCAACTGCTCTCCTGATGAAATTTCTATTGTTAAAAGACTGCTTTGTTACGACCCGGCTAATCGAGCGACCGCTATGGAATTGCTCCAAGATAAGTATTTCACTGAGGATCCATTCCCAGTTCCGTTGGCTGAGCTTCGTGTTCCTTTGACCAGAAGTGGACAGGACGAGGATTCTCCTGCTGGATGGTACGATTACGATGAGTCCGATTCCGATATGGATGAACTCGGCCCCATGAACGTTACCACCAGTGCCACTGGTTACTCCATACAATTTGATTGA

Coding sequence (CDS)

ATGGAACCTCCACCGGCCAAGAGCTGGAGCATCCACACTCGGCCGGATATCATCCAGAAGTACCAGATCCTCGAGCGAGTCGGATCCGGTGCTTATTCCGATGTTCACCGTGCGCGACGGCTCTCCGACGGCGTCATCGTCGCTTTGAAGGAGATCCACGATTATCAATCGGCGTTCCGCGAAATCGAGGCGCTCCAAATCCTTCAAGGTTCGCCTAATATCGTCGTTCTGCACGAGTACTTTTGGCGCGAAGATGAAGATGCCGTGCTTGTTCTCGAGTTTATGAGAACGGATTTGGCCACCGTTATAGCGGAGGCGAAGAAGCGAGGGTCGGACGGGGTAGAATCCGGGCGTGGGCTAGCGGTCGGTGAGGTGAAGCGGTGGATGATCCAGATTTTGAGTGGTCTTGATGCTTGTCATAGGAATATGATCGTGCATAGGGATTTGAAACCTAGCAATTTGTTGATATCCGATGATGGCGTGCTCAAGCTTGCCGATTTTGGACAGGCAAGAATACTCATGGAGCCTGAATATGTTGAACCAAATGGGATCTCTCAACCATGTGAGATGAACTCTTCAGATCAAGTACCTGCTTCTCAGCCCTCTGCAATTTTTCCTGGAACGGAAAGCTCGGTTCGAGAAGGTAACAGAACTGAAGAGCAAGAACCAATTGGCAAGGAGGAATATTTTAGCGATTTAGGCGAGCTGAAAGCAAAAAATTCAGCAAATGAATTTGACAAGGAAACATATACTTATGATGGAGATACATCTTGCTTAGCAACATGTACCACGAGTGACCTTGAAGATGATCCATTTAAAGGTTCATCATATTCTTATGAAACTGAAGGAGGAGTTCCAGCAGATGATAGCCAAGGTTCGCTCACTTCATCCGTCGGTACTCGCTGGTTCAGGGCCCCCGAATTACTCTATGGCTCAACGAGCTACGGTTTGGAGATCGACTTATGGTCGTTGGGCTGCATTTTTGCTGAACTTTTTACATTGGAACCCCTTTTTCCAGGAACTGCTGACATTGATCAAATGAGCAAAATTTTCACTACTCTTGGCAACTTGACTGAAGATTCATGGCCAGGTTGTTCTGAACTTCCTGATTTCCATATTATATCATTCAACACAATAGAAAAGCCAATCGGTTTAGAAGCATGTCTTCCCAACTGCTCTCCTGATGAAATTTCTATTGTTAAAAGACTGCTTTGTTACGACCCGGCTAATCGAGCGACCGCTATGGAATTGCTCCAAGATAAGTATTTCACTGAGGATCCATTCCCAGTTCCGTTGGCTGAGCTTCGTGTTCCTTTGACCAGAAGTGGACAGGACGAGGATTCTCCTGCTGGATGGTACGATTACGATGAGTCCGATTCCGATATGGATGAACTCGGCCCCATGAACGTTACCACCAGTGCCACTGGTTACTCCATACAATTTGATTGA

Protein sequence

MEPPPAKSWSIHTRPDIIQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGLAVGEVKRWMIQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYVEPNGISQPCEMNSSDQVPASQPSAIFPGTESSVREGNRTEEQEPIGKEEYFSDLGELKAKNSANEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYETEGGVPADDSQGSLTSSVGTRWFRAPELLYGSTSYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDSWPGCSELPDFHIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQDKYFTEDPFPVPLAELRVPLTRSGQDEDSPAGWYDYDESDSDMDELGPMNVTTSATGYSIQFD

Homology

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BLAST of CmaCh05G013460 vs. ExPASy Swiss-Prot
Match: O80345 (Cyclin-dependent kinase F-1 OS=Arabidopsis thaliana OX=3702 GN=CDKF-1 PE=1 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 8.0e-173
Identity = 299/484 (61.78%), Postives = 378/484 (78.10%), Query Frame = 0


Query: 1   MEPPPAKSWSIHTRPDIIQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFR 60
           M+  PA SWSIHTRP+II KY+I ERVGSGAY+DV+RARRLSDG+IVALKEI DYQSAFR
Sbjct: 1   MDKQPATSWSIHTRPEIIAKYEIFERVGSGAYADVYRARRLSDGLIVALKEIFDYQSAFR 60

Query: 61  EIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGL 120
           EI+AL IL GSPN+VV+HEYFWRE+E+AVLVLEF+R+DLA VI + K++    VE G G 
Sbjct: 61  EIDALTILNGSPNVVVMHEYFWREEENAVLVLEFLRSDLAAVIRDGKRKKK--VEGGDGF 120

Query: 121 AVGEVKRWMIQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYVE 180
           +VGE+KRWMIQIL+G+DACHRN+IVHRDLKP N+LISDDGVLKLADFGQARILME + V 
Sbjct: 121 SVGEIKRWMIQILTGVDACHRNLIVHRDLKPGNMLISDDGVLKLADFGQARILMEHDIVA 180

Query: 181 PNGISQPCEMNSSDQVPASQPSAIFPGTESSVREGNRTEEQEPIGKEEYFSDLGELKAKN 240
            +   Q  ++   D    S+P  + P  E+S R+G+  +E+E + K+EYF  + ELKAK 
Sbjct: 181 SDENQQAYKLEDKDG-ETSEPPEVIPDYENSPRQGSDGQEREAMSKDEYFRQVEELKAKQ 240

Query: 241 SA-NEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYETEGGVPADDSQGSLTSSVG 300
              ++ DK++  +DGD SCLATCT S+++DD    +S+SY+ +  V  DD+QG +TS VG
Sbjct: 241 VVRDDTDKDSNVHDGDISCLATCTVSEMDDD-LGRNSFSYDADEAV--DDTQGLMTSCVG 300

Query: 301 TRWFRAPELLYGSTSYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTE 360
           TRWFR PELLYGST YGLE+DLWSLGC+FAEL +LEPLFPG +DIDQ+S++   LGNL E
Sbjct: 301 TRWFRPPELLYGSTMYGLEVDLWSLGCVFAELLSLEPLFPGISDIDQISRVTNVLGNLNE 360

Query: 361 DSWPGCSELPDFHIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQ 420
           + WPGC +LPD+  ISF  +E P+G+E CLPN S D IS++K+L+CYDPA+RAT ME+L 
Sbjct: 361 EVWPGCVDLPDYKSISFAKVESPLGIEGCLPNHSGDVISLLKKLICYDPASRATTMEMLN 420

Query: 421 DKYFTEDPFPVPLAELRVPLTRSGQDEDSPAGWYDYDE--SDSDMDELGPMNVTTSATGY 480
           DKY +E+P PVP++EL VP T SG DEDSP  W DY E  SDSD D  GPMNV  +++G+
Sbjct: 421 DKYLSEEPLPVPVSELYVPPTMSGPDEDSPRKWNDYREMDSDSDFDGFGPMNVKPTSSGF 478

Query: 481 SIQF 482
           +I+F
Sbjct: 481 TIEF 478

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BLAST of CmaCh05G013460 vs. ExPASy Swiss-Prot
Match: Q5Z754 (Cyclin-dependent kinase F-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-1 PE=2 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 1.1e-129
Identity = 248/482 (51.45%), Postives = 334/482 (69.29%), Query Frame = 0


Query: 8   SWSIHTRPDIIQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQI 67
           SWSIH RPD+  +Y++L R GSGAY+DV+R RR SDG  VALKE+HD  SA RE +AL  
Sbjct: 11  SWSIHGRPDVTSRYEVLGRAGSGAYADVYRGRRRSDGAPVALKEVHDAVSARREADALLA 70

Query: 68  LQGSPNIVVLHEYFWRED-EDAVLVLEFMRTDLATVI-AEAKKRGSDGVESGRGLAVGEV 127
              S ++V L ++F   D +D VLVLE++  DL+ V+ A A  R S        L   + 
Sbjct: 71  AAPSRHVVALLDHFPGGDHDDDVLVLEWLPLDLSAVVRAAAAARPS-------ALPAAQR 130

Query: 128 KRWMIQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYVEPNGIS 187
           KRWM+Q+L G+ ACH   +VHRDLKP+NLLIS+DGVLK+AD GQARIL E    +     
Sbjct: 131 KRWMLQVLEGVAACHSAGVVHRDLKPANLLISEDGVLKVADLGQARILQETGTYQG---M 190

Query: 188 QPCEMNSSDQVPASQPSAIFPGTE----SSVREGNRTEEQEPIGKEEYFSDLGELKAKNS 247
            P E +S  +   SQ  A+  G +    S   E    +E E +   +Y  ++ +L+AK++
Sbjct: 191 HPYEQSSGVEPWVSQQRAVLHGVKENHPSHDSETQTGQEPERLTAADYLHEMDQLRAKST 250

Query: 248 ANEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYETEGGVPADDSQGSLTSSVGTR 307
             + DK +   DG+ SCLATC+T+D++DDPF+ +SYSY+ E G+  ++S G+ TS VGTR
Sbjct: 251 HGDVDKMS-LQDGNASCLATCSTADIDDDPFR-ASYSYDAEEGMLEEES-GAFTSCVGTR 310

Query: 308 WFRAPELLYGSTSYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDS 367
           WFRAPELLYGST+YG E+DLWSLGCI AELF LEP+FPGT+DIDQ+ +I + LGN+TE++
Sbjct: 311 WFRAPELLYGSTNYGQEVDLWSLGCILAELFNLEPIFPGTSDIDQIGRIISVLGNITEET 370

Query: 368 WPGCSELPDFHIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQDK 427
           +PGCS LPD++ I FN +EKPIGLEACLP+ S  E+SI+KRLLCYDP  RA+A +LL D 
Sbjct: 371 FPGCSNLPDYNKIFFNKVEKPIGLEACLPDRSASEVSIIKRLLCYDPTKRASAADLLNDP 430

Query: 428 YFTEDPFPVPLAELRVPLTRSGQDEDSPAGWYDY--DESDSDMDELGPMNVTTSATGYSI 482
           YF E+P PVP+  L+VP ++  +D+DS   W ++   +SDSD DE G M+VT +  G+SI
Sbjct: 431 YFAEEPLPVPIEGLQVPESKD-EDDDSTEEWANFRGGDSDSDFDEFGSMDVTKTDKGFSI 478

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BLAST of CmaCh05G013460 vs. ExPASy Swiss-Prot
Match: A2YCH5 (Cyclin-dependent kinase F-1 OS=Oryza sativa subsp. indica OX=39946 GN=CDKF-1 PE=3 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 4.1e-129
Identity = 248/482 (51.45%), Postives = 334/482 (69.29%), Query Frame = 0


Query: 8   SWSIHTRPDIIQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQI 67
           SWSIH RPD+  +Y++L R GSGAY+DV+R RR SDG  VALKE+HD  SA RE +AL  
Sbjct: 11  SWSIHGRPDVTSRYEVLGRAGSGAYADVYRGRRRSDGAPVALKEVHDAVSARREADALLA 70

Query: 68  LQGSPNIVVLHEYFWRED-EDAVLVLEFMRTDLATVI-AEAKKRGSDGVESGRGLAVGEV 127
              S ++V L ++F   D +D VLVLE++  DL+ V+ A A  R S    + R       
Sbjct: 71  AAPSRHVVALLDHFPGGDHDDDVLVLEWLPLDLSAVVRAAAAARPSAPPAAQR------- 130

Query: 128 KRWMIQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYVEPNGIS 187
           KRWM+Q+L G+ ACH   +VHRDLKP+NLLIS+DGVLK+AD GQARIL E    +     
Sbjct: 131 KRWMLQVLEGVAACHSAGVVHRDLKPANLLISEDGVLKVADLGQARILQETGTYQG---M 190

Query: 188 QPCEMNSSDQVPASQPSAIFPGTE----SSVREGNRTEEQEPIGKEEYFSDLGELKAKNS 247
            P E +S  +   SQ  A+  G +    S   E    +E E +   +Y  ++ +L+AK++
Sbjct: 191 HPYEQSSGVEPWVSQQRAVLHGVKENHPSHDSETQTGQEPERLTAADYLHEMDQLRAKST 250

Query: 248 ANEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYETEGGVPADDSQGSLTSSVGTR 307
             + DK +   DG+ SCLATC+T+D++DDPF+ +SYSY+ E G+  ++S G+ TS VGTR
Sbjct: 251 HGDVDKMS-LQDGNASCLATCSTADIDDDPFR-ASYSYDAEEGMLEEES-GAFTSCVGTR 310

Query: 308 WFRAPELLYGSTSYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDS 367
           WFRAPELLYGST+YG E+DLWSLGCI AELF LEP+FPGT+DIDQ+ +I + LGN+TE++
Sbjct: 311 WFRAPELLYGSTNYGQEVDLWSLGCILAELFNLEPIFPGTSDIDQIGRIISVLGNITEET 370

Query: 368 WPGCSELPDFHIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQDK 427
           +PGCS LPD++ I FN +EKPIGLEACLP+ S  E+SI+KRLLCYDP  RA+A +LL D 
Sbjct: 371 FPGCSNLPDYNKIFFNKVEKPIGLEACLPDRSASEVSIIKRLLCYDPTKRASAADLLNDP 430

Query: 428 YFTEDPFPVPLAELRVPLTRSGQDEDSPAGWYDY--DESDSDMDELGPMNVTTSATGYSI 482
           YF E+P PVP+  L+VP ++  +D+DS   W ++   +SDSD DE G M+VT +  G+SI
Sbjct: 431 YFAEEPLPVPIEGLQVPESKD-EDDDSTEEWANFRGGDSDSDFDEFGSMDVTKTDKGFSI 478

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BLAST of CmaCh05G013460 vs. ExPASy Swiss-Prot
Match: A8WIP6 (Cyclin-dependent kinase 20 OS=Danio rerio OX=7955 GN=cdk20 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.8e-47
Identity = 131/428 (30.61%), Postives = 186/428 (43.46%), Query Frame = 0


Query: 18  IQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQ-------SAFREIEALQILQG 77
           + +Y IL R+G GA+  V +A+ +  G  VALK++   +        A REI+ALQ ++ 
Sbjct: 1   MDQYSILGRIGEGAHGIVFKAKHIETGETVALKKVALRRLEDGIPNQALREIKALQEIED 60

Query: 78  SPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGLAVGEVKRWMI 137
           +  +V L + F       VLV E+M +DL+ VI            S R L   +VK +M+
Sbjct: 61  NQYVVKLKDVF-PHGTGFVLVFEYMLSDLSEVIR----------NSQRPLTASQVKSYMM 120

Query: 138 QILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYVEPNGISQPCEM 197
            +L G+  CH N I+HRDLKP+NLLIS  G LK+ADFG AR+                  
Sbjct: 121 MLLKGVAFCHENSIMHRDLKPANLLISSTGHLKIADFGLARLF----------------- 180

Query: 198 NSSDQVPASQPSAIFPGTESSVREGNRTEEQEPIGKEEYFSDLGELKAKNSANEFDKETY 257
                                                              +NE D+   
Sbjct: 181 ---------------------------------------------------SNEGDR--- 240

Query: 258 TYDGDTSCLATCTTSDLEDDPFKGSSYSYETEGGVPADDSQGSLTSSVGTRWFRAPELLY 317
                                     YS++                 V TRW+RAPELLY
Sbjct: 241 -------------------------LYSHQ-----------------VATRWYRAPELLY 300

Query: 318 GSTSYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDSWPGCSELPD 377
           G+  Y   +DLW++GCIF EL    PLFPG  DI+Q+  +   LG   +  WP  +ELPD
Sbjct: 301 GARKYDEGVDLWAVGCIFGELLNNSPLFPGENDIEQLCCVLRVLGTPNQKVWPEITELPD 303

Query: 378 FHIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQDKYFTEDPFPV 437
           ++ I+F     PI LE  +P+ SP  + ++K+ L Y    R +A + L   YF  DP P 
Sbjct: 361 YNKITFKE-NPPIPLEEIVPDTSPQAVDLLKKFLVYPSKQRISARQALLHPYFFTDPLPA 303

Query: 438 PLAELRVP 439
             +EL +P
Sbjct: 421 HHSELPIP 303

[Close]

BLAST of CmaCh05G013460 vs. ExPASy Swiss-Prot
Match: Q9JHU3 (Cyclin-dependent kinase 20 OS=Mus musculus OX=10090 GN=Cdk20 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-46
Identity = 133/433 (30.72%), Postives = 185/433 (42.73%), Query Frame = 0


Query: 18  IQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQ-------SAFREIEALQILQG 77
           + +Y IL R+G GA+  V +A+ +  G IVALK++   +        A REI+ALQ ++ 
Sbjct: 1   MDQYCILGRIGEGAHGIVFKAKHVETGEIVALKKVALRRLEDGIPNQALREIKALQEIED 60

Query: 78  SPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGLAVGEVKRWMI 137
           S  +V L   F       VL  EFM +DLA V+  A+          R LA  +VK ++ 
Sbjct: 61  SQYVVQLKAVF-PHGAGFVLAFEFMLSDLAEVVRHAQ----------RPLAPAQVKSYLQ 120

Query: 138 QILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYVEPNGISQPCEM 197
            +L G+  CH N IVHRDLKP+NLLIS  G LK+ADFG AR+        P+G       
Sbjct: 121 MLLKGVAFCHANNIVHRDLKPANLLISASGQLKIADFGLARVF------SPDG------- 180

Query: 198 NSSDQVPASQPSAIFPGTESSVREGNRTEEQEPIGKEEYFSDLGELKAKNSANEFDKETY 257
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 258 TYDGDTSCLATCTTSDLEDDPFKGSSYSYETEGGVPADDSQGSLTSSVGTRWFRAPELLY 317
                                  G  Y+++                 V TRW+RAPELLY
Sbjct: 241 -----------------------GRLYTHQ-----------------VATRWYRAPELLY 300

Query: 318 GSTSYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDSWPGCSELPD 377
           G+  Y   +DLW++GCI  EL    PLFPG  DI+Q+  +   LG  +   WP  +ELPD
Sbjct: 301 GARQYDQGVDLWAVGCIMGELLNGSPLFPGENDIEQLCCVLRILGTPSPRVWPEITELPD 308

Query: 378 FHIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQDKYFTEDPFPV 437
           ++ ISF   + P+ LE  LP+ SP  + ++ + L Y P  R  A + L  +YF   P P 
Sbjct: 361 YNKISFKE-QAPVPLEEVLPDASPQALDLLGQFLLYPPRQRIAASQALLHQYFFTAPLPA 308

Query: 438 PLAELRVPLTRSG 444
             +EL +P    G
Sbjct: 421 HPSELPIPQRPGG 308

[Close]

BLAST of CmaCh05G013460 vs. TAIR 10
Match: AT4G28980.2 (CDK-activating kinase 1AT )

HSP 1 Score: 608.2 bits (1567), Expect = 5.7e-174
Identity = 299/484 (61.78%), Postives = 378/484 (78.10%), Query Frame = 0


Query: 1   MEPPPAKSWSIHTRPDIIQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFR 60
           M+  PA SWSIHTRP+II KY+I ERVGSGAY+DV+RARRLSDG+IVALKEI DYQSAFR
Sbjct: 1   MDKQPATSWSIHTRPEIIAKYEIFERVGSGAYADVYRARRLSDGLIVALKEIFDYQSAFR 60

Query: 61  EIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGL 120
           EI+AL IL GSPN+VV+HEYFWRE+E+AVLVLEF+R+DLA VI + K++    VE G G 
Sbjct: 61  EIDALTILNGSPNVVVMHEYFWREEENAVLVLEFLRSDLAAVIRDGKRKKK--VEGGDGF 120

Query: 121 AVGEVKRWMIQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYVE 180
           +VGE+KRWMIQIL+G+DACHRN+IVHRDLKP N+LISDDGVLKLADFGQARILME + V 
Sbjct: 121 SVGEIKRWMIQILTGVDACHRNLIVHRDLKPGNMLISDDGVLKLADFGQARILMEHDIVA 180

Query: 181 PNGISQPCEMNSSDQVPASQPSAIFPGTESSVREGNRTEEQEPIGKEEYFSDLGELKAKN 240
            +   Q  ++   D    S+P  + P  E+S R+G+  +E+E + K+EYF  + ELKAK 
Sbjct: 181 SDENQQAYKLEDKDG-ETSEPPEVIPDYENSPRQGSDGQEREAMSKDEYFRQVEELKAKQ 240

Query: 241 SA-NEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYETEGGVPADDSQGSLTSSVG 300
              ++ DK++  +DGD SCLATCT S+++DD    +S+SY+ +  V  DD+QG +TS VG
Sbjct: 241 VVRDDTDKDSNVHDGDISCLATCTVSEMDDD-LGRNSFSYDADEAV--DDTQGLMTSCVG 300

Query: 301 TRWFRAPELLYGSTSYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTE 360
           TRWFR PELLYGST YGLE+DLWSLGC+FAEL +LEPLFPG +DIDQ+S++   LGNL E
Sbjct: 301 TRWFRPPELLYGSTMYGLEVDLWSLGCVFAELLSLEPLFPGISDIDQISRVTNVLGNLNE 360

Query: 361 DSWPGCSELPDFHIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQ 420
           + WPGC +LPD+  ISF  +E P+G+E CLPN S D IS++K+L+CYDPA+RAT ME+L 
Sbjct: 361 EVWPGCVDLPDYKSISFAKVESPLGIEGCLPNHSGDVISLLKKLICYDPASRATTMEMLN 420

Query: 421 DKYFTEDPFPVPLAELRVPLTRSGQDEDSPAGWYDYDE--SDSDMDELGPMNVTTSATGY 480
           DKY +E+P PVP++EL VP T SG DEDSP  W DY E  SDSD D  GPMNV  +++G+
Sbjct: 421 DKYLSEEPLPVPVSELYVPPTMSGPDEDSPRKWNDYREMDSDSDFDGFGPMNVKPTSSGF 478

Query: 481 SIQF 482
           +I+F
Sbjct: 481 TIEF 478

[Close]

BLAST of CmaCh05G013460 vs. TAIR 10
Match: AT4G28980.1 (CDK-activating kinase 1AT )

HSP 1 Score: 608.2 bits (1567), Expect = 5.7e-174
Identity = 299/484 (61.78%), Postives = 378/484 (78.10%), Query Frame = 0


Query: 1   MEPPPAKSWSIHTRPDIIQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFR 60
           M+  PA SWSIHTRP+II KY+I ERVGSGAY+DV+RARRLSDG+IVALKEI DYQSAFR
Sbjct: 1   MDKQPATSWSIHTRPEIIAKYEIFERVGSGAYADVYRARRLSDGLIVALKEIFDYQSAFR 60

Query: 61  EIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGL 120
           EI+AL IL GSPN+VV+HEYFWRE+E+AVLVLEF+R+DLA VI + K++    VE G G 
Sbjct: 61  EIDALTILNGSPNVVVMHEYFWREEENAVLVLEFLRSDLAAVIRDGKRKKK--VEGGDGF 120

Query: 121 AVGEVKRWMIQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYVE 180
           +VGE+KRWMIQIL+G+DACHRN+IVHRDLKP N+LISDDGVLKLADFGQARILME + V 
Sbjct: 121 SVGEIKRWMIQILTGVDACHRNLIVHRDLKPGNMLISDDGVLKLADFGQARILMEHDIVA 180

Query: 181 PNGISQPCEMNSSDQVPASQPSAIFPGTESSVREGNRTEEQEPIGKEEYFSDLGELKAKN 240
            +   Q  ++   D    S+P  + P  E+S R+G+  +E+E + K+EYF  + ELKAK 
Sbjct: 181 SDENQQAYKLEDKDG-ETSEPPEVIPDYENSPRQGSDGQEREAMSKDEYFRQVEELKAKQ 240

Query: 241 SA-NEFDKETYTYDGDTSCLATCTTSDLEDDPFKGSSYSYETEGGVPADDSQGSLTSSVG 300
              ++ DK++  +DGD SCLATCT S+++DD    +S+SY+ +  V  DD+QG +TS VG
Sbjct: 241 VVRDDTDKDSNVHDGDISCLATCTVSEMDDD-LGRNSFSYDADEAV--DDTQGLMTSCVG 300

Query: 301 TRWFRAPELLYGSTSYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTE 360
           TRWFR PELLYGST YGLE+DLWSLGC+FAEL +LEPLFPG +DIDQ+S++   LGNL E
Sbjct: 301 TRWFRPPELLYGSTMYGLEVDLWSLGCVFAELLSLEPLFPGISDIDQISRVTNVLGNLNE 360

Query: 361 DSWPGCSELPDFHIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQ 420
           + WPGC +LPD+  ISF  +E P+G+E CLPN S D IS++K+L+CYDPA+RAT ME+L 
Sbjct: 361 EVWPGCVDLPDYKSISFAKVESPLGIEGCLPNHSGDVISLLKKLICYDPASRATTMEMLN 420

Query: 421 DKYFTEDPFPVPLAELRVPLTRSGQDEDSPAGWYDYDE--SDSDMDELGPMNVTTSATGY 480
           DKY +E+P PVP++EL VP T SG DEDSP  W DY E  SDSD D  GPMNV  +++G+
Sbjct: 421 DKYLSEEPLPVPVSELYVPPTMSGPDEDSPRKWNDYREMDSDSDFDGFGPMNVKPTSSGF 478

Query: 481 SIQF 482
           +I+F
Sbjct: 481 TIEF 478

[Close]

BLAST of CmaCh05G013460 vs. TAIR 10
Match: AT1G73690.1 (cyclin-dependent kinase D1;1 )

HSP 1 Score: 164.9 bits (416), Expect = 1.7e-40
Identity = 124/439 (28.25%), Postives = 179/439 (40.77%), Query Frame = 0


Query: 17  IIQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQ-------SAFREIEALQILQ 76
           +  +Y   E +G G Y  V +A    +G  VA+K+I   +       +A REI+ L+ L+
Sbjct: 7   VADRYLKREVLGQGTYGVVFKATDTKNGETVAIKKIRLGKEKEGVNVTALREIKLLKELK 66

Query: 77  GSPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGLAVGEVKRWM 136
             P+I+ L + F    E+  +V EFM TDL  VI +              L+ G+VK ++
Sbjct: 67  -HPHIIELIDAF-PHKENLHIVFEFMETDLEAVIRDRNLY----------LSPGDVKSYL 126

Query: 137 IQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYVEPNGISQPCE 196
             IL GL+ CH   ++HRD+KP+NLLI  +G LKLADFG ARI   P             
Sbjct: 127 QMILKGLEYCHGKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSP------------- 186

Query: 197 MNSSDQVPASQPSAIFPGTESSVREGNRTEEQEPIGKEEYFSDLGELKAKNSANEFDKET 256
                                              G++                      
Sbjct: 187 -----------------------------------GRK---------------------- 246

Query: 257 YTYDGDTSCLATCTTSDLEDDPFKGSSYSYETEGGVPADDSQGSLTSSVGTRWFRAPELL 316
                                                        T  V  RW+RAPELL
Sbjct: 247 --------------------------------------------FTHQVFARWYRAPELL 306

Query: 317 YGSTSYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDSWPGCSELP 376
           +G+  Y   +D+W+ GCIFAEL    P   G +DIDQ+SKIF   G    D WP    LP
Sbjct: 307 FGAKQYDGAVDVWAAGCIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDMICLP 314

Query: 377 DFHIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQDKYFTEDPFP 436
           D+  + +  +  P  L + LP  S D + ++ ++  YDP +R +  + L+ +YFT  P P
Sbjct: 367 DY--VEYQFVPAP-SLRSLLPTVSEDALDLLSKMFTYDPKSRISIQQALKHRYFTSAPSP 314

Query: 437 VPLAELRVPLTRSGQDEDS 449
                L++P   S QD  S
Sbjct: 427 TD--PLKLPRPVSKQDAKS 314

[Close]

BLAST of CmaCh05G013460 vs. TAIR 10
Match: AT1G18040.1 (cyclin-dependent kinase D1;3 )

HSP 1 Score: 164.9 bits (416), Expect = 1.7e-40
Identity = 123/445 (27.64%), Postives = 180/445 (40.45%), Query Frame = 0


Query: 17  IIQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQ-------SAFREIEALQILQ 76
           +  +Y   E +G G Y  V +A        VA+K+I   +       +A REI+ L+ L+
Sbjct: 8   VADRYLKQEVLGQGTYGVVFKATDTKTEQTVAIKKIRLGKQREGVNITALREIKMLKELK 67

Query: 77  GSPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGLAVGEVKRWM 136
             P+I++L + F    E+  LV EFM TDL  VI           +S   L+  ++K ++
Sbjct: 68  -HPHIILLIDAF-PHKENLHLVFEFMETDLEAVIR----------DSNIFLSPADIKSYL 127

Query: 137 IQILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYVEPNGISQPCE 196
           +    GL  CH   ++HRD+KP+NLLI  DG LKLADFG ARI   P             
Sbjct: 128 LMTFKGLAYCHDKWVLHRDMKPNNLLIGVDGQLKLADFGLARIFGSP------------- 187

Query: 197 MNSSDQVPASQPSAIFPGTESSVREGNRTEEQEPIGKEEYFSDLGELKAKNSANEFDKET 256
                                     NR                                
Sbjct: 188 --------------------------NR-------------------------------- 247

Query: 257 YTYDGDTSCLATCTTSDLEDDPFKGSSYSYETEGGVPADDSQGSLTSSVGTRWFRAPELL 316
                                                        T  V  RW+RAPELL
Sbjct: 248 -------------------------------------------KFTHQVFARWYRAPELL 307

Query: 317 YGSTSYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDSWPGCSELP 376
           +G+  YG  +D+W++ CIFAEL    P   G +DIDQ+SKIF   G    D WP  ++LP
Sbjct: 308 FGAKQYGAAVDVWAVACIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWPDLTKLP 321

Query: 377 DFHIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQDKYFTEDPFP 436
           D+  + +  +  P  L +  P  S D + ++ ++  YDP  R +  + L+ +YFT  P P
Sbjct: 368 DY--VEYQFVPAP-SLRSLFPAVSDDALDLLSKMFTYDPKARISIKQALEHRYFTSAPAP 321

Query: 437 VPLAELRVPLTRSGQDEDSPAGWYD 455
              A+L  P+ +  QD  S  G ++
Sbjct: 428 TDPAKLPKPVPK--QDGKSSYGKHE 321

[Close]

BLAST of CmaCh05G013460 vs. TAIR 10
Match: AT1G66750.1 (CDK-activating kinase 4 )

HSP 1 Score: 163.3 bits (412), Expect = 4.8e-40
Identity = 123/468 (26.28%), Postives = 182/468 (38.89%), Query Frame = 0


Query: 18  IQKYQILERVGSGAYSDVHRARRLSDGVIVALKEIHDYQ-------SAFREIEALQILQG 77
           + +Y   + +G G Y  V++A     G  VA+K+I           +A REI+ L+ L  
Sbjct: 10  VDRYLRRQILGEGTYGVVYKATDTKTGKTVAVKKIRLGNQKEGVNFTALREIKLLKEL-N 69

Query: 78  SPNIVVLHEYFWREDEDAVLVLEFMRTDLATVIAEAKKRGSDGVESGRGLAVGEVKRWMI 137
            P+IV L + F   D    LV E+M+TDL  VI           +    L+ G++K +M+
Sbjct: 70  HPHIVELIDAF-PHDGSLHLVFEYMQTDLEAVIR----------DRNIFLSPGDIKSYML 129

Query: 138 QILSGLDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMEPEYVEPNGISQPCEM 197
             L GL  CH+  ++HRD+KP+NLLI ++G+LKLADFG AR+   P              
Sbjct: 130 MTLKGLAYCHKKWVLHRDMKPNNLLIGENGLLKLADFGLARLFGSP-------------- 189

Query: 198 NSSDQVPASQPSAIFPGTESSVREGNRTEEQEPIGKEEYFSDLGELKAKNSANEFDKETY 257
                                    NR                                 
Sbjct: 190 -------------------------NR--------------------------------- 249

Query: 258 TYDGDTSCLATCTTSDLEDDPFKGSSYSYETEGGVPADDSQGSLTSSVGTRWFRAPELLY 317
                                                       T  V   W+RAPELL+
Sbjct: 250 ------------------------------------------RFTHQVFATWYRAPELLF 309

Query: 318 GSTSYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSKIFTTLGNLTEDSWPGCSELPD 377
           GS  YG  +D+W+ GCIFAEL    P  PG+ +IDQ+ KIF   G      W     LPD
Sbjct: 310 GSRQYGAGVDVWAAGCIFAELLLRRPFLPGSTEIDQLGKIFQAFGTPVPSQWSDMIYLPD 348

Query: 378 FHIISFNTIEKPIGLEACLPNCSPDEISIVKRLLCYDPANRATAMELLQDKYFTEDPFPV 437
           +   S+ T   P  L    P  S D + ++ ++  YDP  R T  + L  +YF+  P P 
Sbjct: 370 YMEFSY-TPAPP--LRTIFPMASDDALDLLAKMFIYDPRQRITIQQALDHRYFSSSPSPT 348

Query: 438 PLAELRVPLTRSGQDEDSPAGWYDYDESDSDMDELGPMNVTTSATGYS 479
              +L++P ++    E   +    +  S + +   G M       G++
Sbjct: 430 EPGKLQIPASKGDALEPKASEQNQHGNSPAVLSPPGKMRRVMGPEGFT 348

The following BLAST results are available for this feature:

BLAST of CmaCh05G013460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80345	8.0e-173	61.78	Cyclin-dependent kinase F-1 OS=Arabidopsis thaliana OX=3702 GN=CDKF-1 PE=1 SV=1	[more]
Q5Z754	1.1e-129	51.45	Cyclin-dependent kinase F-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-1 P...	[more]
A2YCH5	4.1e-129	51.45	Cyclin-dependent kinase F-1 OS=Oryza sativa subsp. indica OX=39946 GN=CDKF-1 PE=...	[more]
A8WIP6	1.8e-47	30.61	Cyclin-dependent kinase 20 OS=Danio rerio OX=7955 GN=cdk20 PE=2 SV=1	[more]
Q9JHU3	1.2e-46	30.72	Cyclin-dependent kinase 20 OS=Mus musculus OX=10090 GN=Cdk20 PE=1 SV=1	[more]

BLAST of CmaCh05G013460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28980.2	5.7e-174	61.78	CDK-activating kinase 1AT	[more]
AT4G28980.1	5.7e-174	61.78	CDK-activating kinase 1AT	[more]
AT1G73690.1	1.7e-40	28.25	cyclin-dependent kinase D1;1	[more]
AT1G18040.1	1.7e-40	27.64	cyclin-dependent kinase D1;3	[more]
AT1G66750.1	4.8e-40	26.28	CDK-activating kinase 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000719	Protein kinase domain	SMART	SM00220	serkin_6	coord: 21..423 e-value: 5.9E-78 score: 275.0
IPR000719	Protein kinase domain	PFAM	PF00069	Pkinase	coord: 291..423 e-value: 4.4E-22 score: 78.7 coord: 21..177 e-value: 6.1E-32 score: 111.0
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 21..423 score: 39.354015
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 13..111 e-value: 2.3E-19 score: 71.3
None	No IPR available	GENE3D	1.10.510.10	Transferase(Phosphotransferase) domain 1	coord: 114..229 e-value: 1.3E-19 score: 72.5 coord: 259..428 e-value: 9.2E-37 score: 128.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 439..471
None	No IPR available	PANTHER	PTHR24056:SF107	CYCLIN-DEPENDENT KINASE 10	coord: 18..439
None	No IPR available	PANTHER	PTHR24056	CELL DIVISION PROTEIN KINASE	coord: 18..439
IPR008271	Serine/threonine-protein kinase, active site	PROSITE	PS00108	PROTEIN_KINASE_ST	coord: 144..156
IPR017441	Protein kinase, ATP binding site	PROSITE	PS00107	PROTEIN_KINASE_ATP	coord: 27..50
IPR011009	Protein kinase-like domain superfamily	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 7..439

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G013460.1	CmaCh05G013460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010078	maintenance of root meristem identity
biological_process	GO:1904031	positive regulation of cyclin-dependent protein kinase activity
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0019912	cyclin-dependent protein kinase activating kinase activity
molecular_function	GO:0008353	RNA polymerase II CTD heptapeptide repeat kinase activity
molecular_function	GO:0004672	protein kinase activity