CmaCh05G007190 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh05G007190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Basic helix-loop-helix (BHLH) DNA-binding superfamily protein
Location	Cma_Chr05: 3861355 .. 3863985 (+)
RNA-Seq Expression	CmaCh05G007190
Synteny	CmaCh05G007190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAACATTCTCGACGAGTATCAGTACTACTGGGAAACGAACATGTTTCTACAGACGGAAGAGTTCGACAGGTTCTTAAGCAGCTTTTGATATTCTCTGTTTTTTTTTTTTAAATCTCTGCGAATTATGTTCGTAACGAAATGGAAATTTCAGTTGGGGAGTGGACGAAGCGTTTTACGGTTCTTACGATTCAAGCTCGCCGGACGGAACGCCGTCGTCGTTAGAGGCGTCGAAGAACATCTTGTCGGAGAGGAATCGGAGGAAGAAGCTGAACGATAGGCTTCTGGCTCTCAGAGCTGTGGTCCCTAATATCACCAAAGTAAGTCAAATTCTTATTATTATTATTTAGTGAAGAAAGTAATTTAAATTGTATAAATTATAAAAATAAAATCTCTAATATCGATTTTCCCCCAATAATCAATCGTTCCTTGGGATCTGCGTTTACCGAAATAATTTTTCTGAGGATTTTAATAAAATAAAATAATGCTTTCTATATATACTTTTATTTAACTTATTAAAATCAACCCGAGATTTTAAATCTAATATTATATTATTTTTTTATTTAATATATTTTGGAACAACATGTCCCAATATGCATATTAAATTGGAAAGATTGTGTGAGTTGTTGAAACAGCACATAATCATTAAGATCTTATAATAATAATAATAATAATAATAATAATAATAACATGAAAATTTGAATATGTAGAATTAATTCGTAATAAAAATCTAATTTTATCATGTCCCAATAATTCAATTTTCAAGCTGCTTAAAATAATAATAATAATAATATAACAAATAATAGCTTAATGTATTGAAATTTTGTGTCAAACTTAGGTGTTCTATTAATCAAATTTAAGTAACAATCACATCTCATCAAAAGAAAAAATGATTTAAATCATTGTGATAAAAGGGTTTTAATTATTATTTCTTTGTCCAAATAATTAAAGAAAGAAATATTAAAATATTATAAATTATAGACTCCACGACAAAGTTATTCAAACAATCATTGAGCCAAGGTAAGTTCAAAGCTACACGTATGTGTTTTATTTATTTTCTTATTTTTTCTTTCAGGTCAATTAAATAAGGTGAAAGATTATAATAATATAATTAGGTGAGACAAAATAAAATTTAATATGAAAAATACATTTTGTAATTTATTTTACCACAACAAATTGGAATTTATTAACGCAGATGGACAAGGCATCGATAATAAAAGACGCGATCGAGTACATCCAAGAGCTGCGAGCGCAAGAGAAGAGAATCGAAGAGGAGATCTCAGATCTGGAATCAGGCAAAATCAAGAACAGAGCAACAAACGAAGATGACGACGGAATCTTGAGGGAGAAGAGAACGAATAAGAATGGGCAAGTACCGGAGCCGCCGCCGTCTTTCCCGATCGAAGTTCTCGACGTAAGGAAATTGAAATTTCTAGGGCTTTTCTGTGTGTTTTTAGTTTGAAATTGAGATTGTTGGGATTGTTTAAGCAGTTGAGGGTGAATTGCATGGGAGAGAAGACGATGGTGGTGAGCTTGACGTGCGGAAGAAGAAGCGACACCATAATGAAAATATGCCAAGTTATTGAATCGCTTAAGATGAAGATTATTACGGCCACTATCACCATTGTTGCCAACAAGCTTTTGATCACGCTCTTCCTTGAGGTCAGTCCTCTGTTTTTGTTTTTTATTTTCTAGAACCCCATCACCTGTAGTGCTCTGAGTTCTTTCTTTATTTTTTCCTCCCAAAACCTCTGCCCATTCTTTTATTTCCCCATTATTATTATTATTATTATTATTATAGATAGCTAAGGTTGCAGCCCCATTATTTAGATCAGGGGATATGGACTGAAGAATGATGGGGCGCCATGGGGTATTTGCTCACGCTTTTGTTCTATCAGATCCTGTTCTTGTCCTCCACTATCGTATCCTACCCTTTCATATGGTCAAAGAACAAATTCTTTTGAGCTTTTCCATAATATCCCAGCACTGCACTCCACCGTGAGCAGACATTTTCGTCTTTCGACTTTTCATTTCGAACTTTTCCTTAAATGTTGTCTATTAGGAAGACTTCGTCTCCCATTCCCCTCCTCATCCAACATTGGCATATCATCCTGTAATTAGTTCAATAGATTTAAATTGTTACATTACCATACTTATAAAAGAGACTTTATGAGGTTAGAGGATAAGAATCCTATCTCATGGGTATGTTATTGTGGTTTTTGGTGACAACAGGAGGAGATAGCGGAGGAAGAGGAAGTAAAGGTAAAAATAGAAGCAGCAATTGCAGCAATTAGTGACCCACAAAAGCCTATATGATGAGCATTTGGAGAACCACATGGACATGTTTTGTGTGTCTCGCAGCTTTGTCATCTAACTAATATCTAGTACAATTGTTTCTCCTTTCTCTCTCTTTCTCAATAGCTTTTTGTGGGAAAAAGTCAGAATATTCTTTCTCCCTCACCAGACCTAATAATTTTAGAGAGATAAAATGGTGAAAATGATTGTTTTGTTTATGACACTAAATACATGGTTCAATTATTGGAAAAAAACAATAGGAAGGACACCTACAAAAGTATTTGAGACCTCATAGAAAAATCAAATATTTTTCTTTTTTTAGAAATATTAGAAA

mRNA sequence

ATGGAGAACATTCTCGACGAGTATCAGTACTACTGGGAAACGAACATGTTTCTACAGACGGAAGAGTTCGACAGTTGGGGAGTGGACGAAGCGTTTTACGGTTCTTACGATTCAAGCTCGCCGGACGGAACGCCGTCGTCGTTAGAGGCGTCGAAGAACATCTTGTCGGAGAGGAATCGGAGGAAGAAGCTGAACGATAGGCTTCTGGCTCTCAGAGCTGTGGTCCCTAATATCACCAAAATGGACAAGGCATCGATAATAAAAGACGCGATCGAGTACATCCAAGAGCTGCGAGCGCAAGAGAAGAGAATCGAAGAGGAGATCTCAGATCTGGAATCAGGCAAAATCAAGAACAGAGCAACAAACGAAGATGACGACGGAATCTTGAGGGAGAAGAGAACGAATAAGAATGGGCAAGTACCGGAGCCGCCGCCGTCTTTCCCGATCGAAGTTCTCGACTTGAGGGTGAATTGCATGGGAGAGAAGACGATGGTGGTGAGCTTGACGTGCGGAAGAAGAAGCGACACCATAATGAAAATATGCCAAGTTATTGAATCGCTTAAGATGAAGATTATTACGGCCACTATCACCATTGTTGCCAACAAGCTTTTGATCACGCTCTTCCTTGAGGAGGAGATAGCGGAGGAAGAGGAAGTAAAGGTAAAAATAGAAGCAGCAATTGCAGCAATTAGTGACCCACAAAAGCCTATATGATGAGCATTTGGAGAACCACATGGACATGTTTTGTGTGTCTCGCAGCTTTGTCATCTAACTAATATCTAGTACAATTGTTTCTCCTTTCTCTCTCTTTCTCAATAGCTTTTTGTGGGAAAAAGTCAGAATATTCTTTCTCCCTCACCAGACCTAATAATTTTAGAGAGATAAAATGGTGAAAATGATTGTTTTGTTTATGACACTAAATACATGGTTCAATTATTGGAAAAAAACAATAGGAAGGACACCTACAAAAGTATTTGAGACCTCATAGAAAAATCAAATATTTTTCTTTTTTTAGAAATATTAGAAA

Coding sequence (CDS)

ATGGAGAACATTCTCGACGAGTATCAGTACTACTGGGAAACGAACATGTTTCTACAGACGGAAGAGTTCGACAGTTGGGGAGTGGACGAAGCGTTTTACGGTTCTTACGATTCAAGCTCGCCGGACGGAACGCCGTCGTCGTTAGAGGCGTCGAAGAACATCTTGTCGGAGAGGAATCGGAGGAAGAAGCTGAACGATAGGCTTCTGGCTCTCAGAGCTGTGGTCCCTAATATCACCAAAATGGACAAGGCATCGATAATAAAAGACGCGATCGAGTACATCCAAGAGCTGCGAGCGCAAGAGAAGAGAATCGAAGAGGAGATCTCAGATCTGGAATCAGGCAAAATCAAGAACAGAGCAACAAACGAAGATGACGACGGAATCTTGAGGGAGAAGAGAACGAATAAGAATGGGCAAGTACCGGAGCCGCCGCCGTCTTTCCCGATCGAAGTTCTCGACTTGAGGGTGAATTGCATGGGAGAGAAGACGATGGTGGTGAGCTTGACGTGCGGAAGAAGAAGCGACACCATAATGAAAATATGCCAAGTTATTGAATCGCTTAAGATGAAGATTATTACGGCCACTATCACCATTGTTGCCAACAAGCTTTTGATCACGCTCTTCCTTGAGGAGGAGATAGCGGAGGAAGAGGAAGTAAAGGTAAAAATAGAAGCAGCAATTGCAGCAATTAGTGACCCACAAAAGCCTATATGA

Protein sequence

MENILDEYQYYWETNMFLQTEEFDSWGVDEAFYGSYDSSSPDGTPSSLEASKNILSERNRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIEEEISDLESGKIKNRATNEDDDGILREKRTNKNGQVPEPPPSFPIEVLDLRVNCMGEKTMVVSLTCGRRSDTIMKICQVIESLKMKIITATITIVANKLLITLFLEEEIAEEEEVKVKIEAAIAAISDPQKPI

Homology

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BLAST of CmaCh05G007190 vs. ExPASy Swiss-Prot
Match: Q2HIV9 (Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.9e-51
Identity = 123/241 (51.04%), Postives = 172/241 (71.37%), Query Frame = 0


Query: 1   MENILD-EYQYYWETNMFLQTEEFD---SWGVDEAFYGSYDSSSPDGTPSSLEASKNILS 60
           ME+I+D E   YWE + FLQ E+F+   SW ++EA  GSYDSSSPDG  SS  ASKNI+S
Sbjct: 1   MEDIVDQELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGAASS-PASKNIVS 60

Query: 61  ERNRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIEEEISDLESGKI 120
           ERNRR+KLN RL ALR+VVPNITKMDKASIIKDAI YI+ L+ +EK++E EI +LES   
Sbjct: 61  ERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPK 120

Query: 121 KNRATNED-DDGILREKRTNKNGQVPEPPPSFPIEVLDLRVNCMGEKTMVVSLTCGRRSD 180
            + + ++D D  +L    + K  Q+     +  IEVL+L+V  MGE+TMVVS+TC +R+D
Sbjct: 121 SSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCNKRTD 180

Query: 181 TIMKICQVIESLKMKIITATITIVANKLLITLFLEEEIAEEEEVKVKIEAAIAAISDPQK 237
           T++K+C+V ESL +KI+T+ +T  +  +  T+F+E +  E+E +++KIE  I A ++ Q 
Sbjct: 181 TMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIETGIGAYNETQS 240

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BLAST of CmaCh05G007190 vs. ExPASy Swiss-Prot
Match: Q700E3 (Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.9e-44
Identity = 106/226 (46.90%), Postives = 154/226 (68.14%), Query Frame = 0


Query: 1   MENILDEYQYYWETNMFLQTE--EFDSWGVDEAFYGSYDSSSPDGTPSSLEASKNILSER 60
           ME++  EY+ YWET MF Q +  EFDSW ++EAF GS +SSSPDG  +S  +SKN++SER
Sbjct: 1   MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSER 60

Query: 61  NRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIEEEISDLESGK--I 120
           NRR+KLN RL ALR+VVPNI+K+DKAS+IKD+I+Y+QEL  QEK +E EI +LES    +
Sbjct: 61  NRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLL 120

Query: 121 KNRATNED------------DDGILREKRTNKNGQVPEPPPSFPIEVLDLRVNCMGEKTM 180
           +N   + D            D+  +R K+  K          +PIEVL+++V  MGEKT+
Sbjct: 121 ENPVRDYDCNFAETHLQDFSDNNDMRSKKF-KQMDYSTRVQHYPIEVLEMKVTWMGEKTV 180

Query: 181 VVSLTCGRRSDTIMKICQVIESLKMKIITATITIVANKLLITLFLE 211
           VV +TC ++ +T++++C+V+ESL + I+T   +   ++L  TLFL+
Sbjct: 181 VVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQ 225

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BLAST of CmaCh05G007190 vs. ExPASy Swiss-Prot
Match: Q0JEB7 (Transcription factor BHLH6 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH6 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.2e-34
Identity = 104/297 (35.02%), Postives = 162/297 (54.55%), Query Frame = 0


Query: 6   DEYQYYWETNMFLQTEEFDSWGVDEAFYGSYDSSSPDGTPSSLE---------------- 65
           + + YYWET  +L++EE DS  +      +Y+SSSPDG+ SS                  
Sbjct: 9   ESFAYYWETQRYLESEELDSMYLPTQDDSNYESSSPDGSHSSSAPAPAAVGGDAAAAVAG 68

Query: 66  ----------------------ASKNILSERNRRKKLNDRLLALRAVVPNITKMDKASII 125
                                 A+KNIL ER+RR+KLN++L ALR+VVPNITKMDKASII
Sbjct: 69  SGGGMTTMMMGGGGGGGDDAGGANKNILMERDRRRKLNEKLYALRSVVPNITKMDKASII 128

Query: 126 KDAIEYIQELRAQEKRIEEEISDLESGKIKNR------------ATNEDDDG----ILRE 185
           KDAIEYIQ L+A+E+++  E++ LES    +             A  E + G        
Sbjct: 129 KDAIEYIQRLQAEEQQMLREVAALESAAAASAAPAAANPFAGLGADEEHEYGHHHPSSSS 188

Query: 186 KRTNK-----------NGQVPEPPPSFPIEVLDLRVNCMGEKTMVVSLTCGRRSDTIMKI 238
           +RT K           +  +    P+ P+E+ +LRV+ +G++ +VVS+TC +R D + ++
Sbjct: 189 ERTKKVKRALSVSSISDALLAAAAPAPPVEIQELRVSEVGDRVLVVSVTCSKRRDAMARV 248

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BLAST of CmaCh05G007190 vs. ExPASy Swiss-Prot
Match: Q0V7X4 (Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Arabidopsis thaliana OX=3702 GN=FIT PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.5e-12
Identity = 58/169 (34.32%), Postives = 92/169 (54.44%), Query Frame = 0


Query: 29  DEAFYGSYDSSSP-----DGT-PSSLEASKNILSERNRRKKLNDRLLALRAVVPNITKMD 88
           DE  Y   D SS      DGT  +  + S+ ++SER RR ++ D+L ALR++VPNITKMD
Sbjct: 102 DEEDYNDGDDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMD 161

Query: 89  KASIIKDAIEYIQELRAQEKRIEEEISDLESGKIKNRATNEDDDGILREKRTNKNGQVP- 148
           KASI+ DA+ Y+QEL++Q K+++ +I+ LE+        + +  G  +E   +     P 
Sbjct: 162 KASIVGDAVLYVQELQSQAKKLKSDIAGLEA--------SLNSTGGYQEHAPDAQKTQPF 221

Query: 149 ---EPPPSFPIEVLDLRVNCMGEKTMVVSLTCGRRSDTIMKICQVIESL 188
               PP S   +++ + V  + EK   V L C +       + + +ESL
Sbjct: 222 RGINPPAS--KKIIQMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESL 260

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BLAST of CmaCh05G007190 vs. ExPASy Swiss-Prot
Match: A0A060KY90 (Transcription factor MYC1 OS=Solanum lycopersicum OX=4081 GN=MYC1 PE=1 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-11
Identity = 55/187 (29.41%), Postives = 109/187 (58.29%), Query Frame = 0


Query: 49  EASKNILSERNRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIEEEI 108
           E   ++ +ER RR+KLN R  ALRAVVPN++KMDKAS++ DAI YI EL+++ +      
Sbjct: 454 EPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVQN----- 513

Query: 109 SDLESGKIKNRATNEDDDGILREKRTNK--NGQVPEPPPSFPIEV--LDLRVNCMGEKTM 168
           SDL+  +++++         LR++ TNK  +     PP +  +++  +D+ V  +G   M
Sbjct: 514 SDLDKEELRSQIE------CLRKELTNKGSSNYSASPPLNQDVKIVDMDIDVKVIGWDAM 573

Query: 169 VVSLTCGRRSDTIMKICQVIESLKMKIITATITIVANKLLI---TLFLEEEIAEEEEVKV 228
            + + C +++    ++   ++ L + +  A++++V N L+I   T+ +   +  +E++++
Sbjct: 574 -IRIQCSKKNHPAARLMAALKDLDLDVHHASVSVV-NDLMIQQATVKMGSRLYAQEQLRI 627

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BLAST of CmaCh05G007190 vs. TAIR 10
Match: AT5G57150.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 205.3 bits (521), Expect = 5.4e-53
Identity = 124/240 (51.67%), Postives = 172/240 (71.67%), Query Frame = 0


Query: 1   MENILD-EYQYYWETNMFLQTE--EFDSWGVDEAFYGSYDSSSPDGTPSSLEASKNILSE 60
           ME+I+D E   YWE + FLQ E  E+DSW ++EA  GSYDSSSPDG  SS  ASKNI+SE
Sbjct: 1   MEDIVDQELSNYWEPSSFLQNEDFEYDSWPLEEAISGSYDSSSPDGAASS-PASKNIVSE 60

Query: 61  RNRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIEEEISDLESGKIK 120
           RNRR+KLN RL ALR+VVPNITKMDKASIIKDAI YI+ L+ +EK++E EI +LES    
Sbjct: 61  RNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPKS 120

Query: 121 NRATNED-DDGILREKRTNKNGQVPEPPPSFPIEVLDLRVNCMGEKTMVVSLTCGRRSDT 180
           + + ++D D  +L    + K  Q+     +  IEVL+L+V  MGE+TMVVS+TC +R+DT
Sbjct: 121 SLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCNKRTDT 180

Query: 181 IMKICQVIESLKMKIITATITIVANKLLITLFLEEEIAEEEEVKVKIEAAIAAISDPQKP 237
           ++K+C+V ESL +KI+T+ +T  +  +  T+F+E +  E+E +++KIE  I A ++ Q P
Sbjct: 181 MVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEADEEEQEVLRLKIETGIGAYNETQSP 239

[Close]

BLAST of CmaCh05G007190 vs. TAIR 10
Match: AT4G29930.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 195.3 bits (495), Expect = 5.6e-50
Identity = 115/235 (48.94%), Postives = 165/235 (70.21%), Query Frame = 0


Query: 1   MENILDEYQYYWETNMFLQTE--EFDSWGVDEAFYGSYDSSSPDGTPSSLEASKNILSER 60
           ME++  EY+ YWET MF Q +  EFDSW ++EAF GS +SSSPDG  +S  +SKN++SER
Sbjct: 1   MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSER 60

Query: 61  NRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIEEEISDLESGKIKN 120
           NRR+KLN RL ALR+VVPNI+K+DKAS+IKD+I+Y+QEL  QEK +E EI +LES     
Sbjct: 61  NRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELES----- 120

Query: 121 RATNEDDDGILREKRTNKNGQVPEPPPSFPIEVLDLRVNCMGEKTMVVSLTCGRRSDTIM 180
           R+T       L E   + + +V      +PIEVL+++V  MGEKT+VV +TC ++ +T++
Sbjct: 121 RST-------LLENPMDYSTRVQH----YPIEVLEMKVTWMGEKTVVVCITCSKKRETMV 180

Query: 181 KICQVIESLKMKIITATITIVANKLLITLFLEEEIAEEEEVKVKIEAAIAAISDP 234
           ++C+V+ESL + I+T   +   ++L  TLFL+ +  E   V+ KI+ AIAA +DP
Sbjct: 181 QLCKVLESLNLNILTTNFSSFTSRLSTTLFLQADEEESSAVEAKIQMAIAAYNDP 219

[Close]

BLAST of CmaCh05G007190 vs. TAIR 10
Match: AT4G29930.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 193.7 bits (491), Expect = 1.6e-49
Identity = 116/249 (46.59%), Postives = 168/249 (67.47%), Query Frame = 0


Query: 1   MENILDEYQYYWETNMFLQTE--EFDSWGVDEAFYGSYDSSSPDGTPSSLEASKNILSER 60
           ME++  EY+ YWET MF Q +  EFDSW ++EAF GS +SSSPDG  +S  +SKN++SER
Sbjct: 1   MEDLDHEYKNYWETTMFFQNQELEFDSWPMEEAFSGSGESSSPDGAATSPASSKNVVSER 60

Query: 61  NRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIEEEISDLESGK--I 120
           NRR+KLN RL ALR+VVPNI+K+DKAS+IKD+I+Y+QEL  QEK +E EI +LES    +
Sbjct: 61  NRRQKLNQRLFALRSVVPNISKLDKASVIKDSIDYMQELIDQEKTLEAEIRELESRSTLL 120

Query: 121 KNRATNED------------DDGILREKRTNKNGQVPEPPPSFPIEVLDLRVNCMGEKTM 180
           +N   + D            D+  +R K+  K          +PIEVL+++V  MGEKT+
Sbjct: 121 ENPVRDYDCNFAETHLQDFSDNNDMRSKKF-KQMDYSTRVQHYPIEVLEMKVTWMGEKTV 180

Query: 181 VVSLTCGRRSDTIMKICQVIESLKMKIITATITIVANKLLITLFLEEEIAEEEEVKVKIE 234
           VV +TC ++ +T++++C+V+ESL + I+T   +   ++L  TLFL+ +  E   V+ KI+
Sbjct: 181 VVCITCSKKRETMVQLCKVLESLNLNILTTNFSSFTSRLSTTLFLQADEEESSAVEAKIQ 240

[Close]

BLAST of CmaCh05G007190 vs. TAIR 10
Match: AT5G57150.3 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 2.4e-48
Identity = 116/219 (52.97%), Postives = 158/219 (72.15%), Query Frame = 0


Query: 1   MENILD-EYQYYWETNMFLQTEEFD---SWGVDEAFYGSYDSSSPDGTPSSLEASKNILS 60
           ME+I+D E   YWE + FLQ E+F+   SW ++EA  GSYDSSSPDG  SS  ASKNI+S
Sbjct: 1   MEDIVDQELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGAASS-PASKNIVS 60

Query: 61  ERNRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIEEEISDLESGKI 120
           ERNRR+KLN RL ALR+VVPNITKMDKASIIKDAI YI+ L+ +EK++E EI +LES   
Sbjct: 61  ERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPK 120

Query: 121 KNRATNED-DDGILREKRTNKNGQVPEPPPSFPIEVLDLRVNCMGEKTMVVSLTCGRRSD 180
            + + ++D D  +L    + K  Q+     +  IEVL+L+V  MGE+TMVVS+TC +R+D
Sbjct: 121 SSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCNKRTD 180

Query: 181 TIMKICQVIESLKMKIITATITIVANKLLITLFLEEEIA 215
           T++K+C+V ESL +KI+T+ +T  +  +  T+F+E  IA
Sbjct: 181 TMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEIAIA 218

[Close]

BLAST of CmaCh05G007190 vs. TAIR 10
Match: AT5G57150.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 189.1 bits (479), Expect = 4.0e-48
Identity = 115/218 (52.75%), Postives = 157/218 (72.02%), Query Frame = 0


Query: 1   MENILD-EYQYYWETNMFLQTEEFD---SWGVDEAFYGSYDSSSPDGTPSSLEASKNILS 60
           ME+I+D E   YWE + FLQ E+F+   SW ++EA  GSYDSSSPDG  SS  ASKNI+S
Sbjct: 1   MEDIVDQELSNYWEPSSFLQNEDFEYDRSWPLEEAISGSYDSSSPDGAASS-PASKNIVS 60

Query: 61  ERNRRKKLNDRLLALRAVVPNITKMDKASIIKDAIEYIQELRAQEKRIEEEISDLESGKI 120
           ERNRR+KLN RL ALR+VVPNITKMDKASIIKDAI YI+ L+ +EK++E EI +LES   
Sbjct: 61  ERNRRQKLNQRLFALRSVVPNITKMDKASIIKDAISYIEGLQYEEKKLEAEIRELESTPK 120

Query: 121 KNRATNED-DDGILREKRTNKNGQVPEPPPSFPIEVLDLRVNCMGEKTMVVSLTCGRRSD 180
            + + ++D D  +L    + K  Q+     +  IEVL+L+V  MGE+TMVVS+TC +R+D
Sbjct: 121 SSLSFSKDFDRDLLVPVTSKKMKQLDSGSSTSLIEVLELKVTFMGERTMVVSVTCNKRTD 180

Query: 181 TIMKICQVIESLKMKIITATITIVANKLLITLFLEEEI 214
           T++K+C+V ESL +KI+T+ +T  +  +  T+F+E  I
Sbjct: 181 TMVKLCEVFESLNLKILTSNLTSFSGMIFHTVFIEVSI 217

The following BLAST results are available for this feature:

BLAST of CmaCh05G007190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2HIV9	2.9e-51	51.04	Transcription factor bHLH35 OS=Arabidopsis thaliana OX=3702 GN=BHLH35 PE=2 SV=1	[more]
Q700E3	5.9e-44	46.90	Transcription factor bHLH27 OS=Arabidopsis thaliana OX=3702 GN=BHLH27 PE=2 SV=1	[more]
Q0JEB7	3.2e-34	35.02	Transcription factor BHLH6 OS=Oryza sativa subsp. japonica OX=39947 GN=BHLH6 PE=...	[more]
Q0V7X4	4.5e-12	34.32	Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR OS=Ar...	[more]
A0A060KY90	2.9e-11	29.41	Transcription factor MYC1 OS=Solanum lycopersicum OX=4081 GN=MYC1 PE=1 SV=1	[more]

BLAST of CmaCh05G007190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57150.1	5.4e-53	51.67	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G29930.2	5.6e-50	48.94	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G29930.1	1.6e-49	46.59	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G57150.3	2.4e-48	52.97	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G57150.2	4.0e-48	52.75	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..137
None	No IPR available	PANTHER	PTHR31945	TRANSCRIPTION FACTOR SCREAM2-RELATED	coord: 1..233
None	No IPR available	PANTHER	PTHR31945:SF26	TRANSCRIPTION FACTOR BHLH35	coord: 1..233
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 54..103 e-value: 2.2E-14 score: 63.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 55..97 e-value: 6.9E-11 score: 42.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 48..97 score: 16.18964
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 46..114 e-value: 7.8E-17 score: 62.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 45..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh05G007190.1	CmaCh05G007190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity