CmaCh04G004710 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G004710
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor MYB44-like
Location	Cma_Chr04: 2404852 .. 2405871 (-)
RNA-Seq Expression	CmaCh04G004710
Synteny	CmaCh04G004710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTCTGAAGAGTGGGACATCGATCGGGTCAAGGGCCAATGGAGCCCGGAGGAAGACCAGTTGCTAAGGATTCTAGTGCAGCGCTACGGCGCTCGGAACTGGTCCGTTATCGGTCAGTCGATTCACGGCCGGTCGGGGAAATCCTGCCGTCTGCGGTGGTTTAATCAGCTCTGTCCTGACGTGGAGCGCCAGGCGTTCACTGCGGAGGAGGACGAGGTCATCGTCGAAGCACACGCTAAGCACGGGAACAAGTGGGCGACAATCGCGAGACTACTCAACGGACGCACAGACAACGCGATTAAGAATCACTGGAATTCAACATTGAAGCGTAAGTTCTCTTCGATTGCTGAGATAAAAACTGAGTGTACGAGTCATGGATCGACGATTTCGATTGGAAATCAGTGTTTGAGTTCATCAAGATCGGATACGAACGATTCGATTCCGAGTCAGAACAAAAGGCCTTCGACTCGTCTAAGCCTATCTCTTCCAGGAACAGAATCATCGCCTCCGCGACAGCAGCAGCAGAGTATTTCATCATTGCCGGAGGAGGCGAAAGCGAAATCGGCGCGTTGTGGTAAGGAATTTCTGTCTGTAATGCAATTGATGATTAAAGAAGAGGTGAGGAATTACATAGCGGAATATAGAAAACGGCAACGAATGAGTGAGAAAGAAGATAGAAAGGCAGGGTAAAAAGGAATCAGAAATTAAGGAAGAAGATGATGATAATTAGGGTTTGAAACTTTGAATTTCTGTGATTCTGTATAAACCATTGGAGCCATTAGTCATGTGTTGAATTTGTTTTGAACAGGAAGGAATGCACACACTTCCTTTGTTTCAGAAATTTGAGACAATTTTCACTTTCTGATTATTCCTTTGTGGGTTTCGGTCATTCTTGTTGTGTTCATATTTGTTTGATCTTTTTCTGTATATTACGTAATTGGGTTATCTTGATGCTCATTATGGCCCCTCATATATTGGGCTCCTTAGCATACGCATAGCAGCCATGGTGAGTATTAG

mRNA sequence

ATGACGTCTGAAGAGTGGGACATCGATCGGGTCAAGGGCCAATGGAGCCCGGAGGAAGACCAGTTGCTAAGGATTCTAGTGCAGCGCTACGGCGCTCGGAACTGGTCCGTTATCGGTCAGTCGATTCACGGCCGGTCGGGGAAATCCTGCCGTCTGCGGTGGTTTAATCAGCTCTGTCCTGACGTGGAGCGCCAGGCGTTCACTGCGGAGGAGGACGAGGTCATCGTCGAAGCACACGCTAAGCACGGGAACAAGTGGGCGACAATCGCGAGACTACTCAACGGACGCACAGACAACGCGATTAAGAATCACTGGAATTCAACATTGAAGCGTAAGTTCTCTTCGATTGCTGAGATAAAAACTGAGTGTACGAGTCATGGATCGACGATTTCGATTGGAAATCAGTGTTTGAGTTCATCAAGATCGGATACGAACGATTCGATTCCGAGTCAGAACAAAAGGCCTTCGACTCGTCTAAGCCTATCTCTTCCAGGAACAGAATCATCGCCTCCGCGACAGCAGCAGCAGAGTATTTCATCATTGCCGGAGGAGGCGAAAGCGAAATCGGCGCGTTGTGGTAAGGAATTTCTGTCTGTAATGCAATTGATGATTAAAGAAGAGCATACGCATAGCAGCCATGGTGAGTATTAG

Coding sequence (CDS)

ATGACGTCTGAAGAGTGGGACATCGATCGGGTCAAGGGCCAATGGAGCCCGGAGGAAGACCAGTTGCTAAGGATTCTAGTGCAGCGCTACGGCGCTCGGAACTGGTCCGTTATCGGTCAGTCGATTCACGGCCGGTCGGGGAAATCCTGCCGTCTGCGGTGGTTTAATCAGCTCTGTCCTGACGTGGAGCGCCAGGCGTTCACTGCGGAGGAGGACGAGGTCATCGTCGAAGCACACGCTAAGCACGGGAACAAGTGGGCGACAATCGCGAGACTACTCAACGGACGCACAGACAACGCGATTAAGAATCACTGGAATTCAACATTGAAGCGTAAGTTCTCTTCGATTGCTGAGATAAAAACTGAGTGTACGAGTCATGGATCGACGATTTCGATTGGAAATCAGTGTTTGAGTTCATCAAGATCGGATACGAACGATTCGATTCCGAGTCAGAACAAAAGGCCTTCGACTCGTCTAAGCCTATCTCTTCCAGGAACAGAATCATCGCCTCCGCGACAGCAGCAGCAGAGTATTTCATCATTGCCGGAGGAGGCGAAAGCGAAATCGGCGCGTTGTGGTAAGGAATTTCTGTCTGTAATGCAATTGATGATTAAAGAAGAGCATACGCATAGCAGCCATGGTGAGTATTAG

Protein sequence

MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIKTECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISSLPEEAKAKSARCGKEFLSVMQLMIKEEHTHSSHGEY

Homology

[Close]

BLAST of CmaCh04G004710 vs. ExPASy Swiss-Prot
Match: O23160 (Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.2e-42
Identity = 112/261 (42.91%), Postives = 146/261 (55.94%), Query Frame = 0


Query: 7   DIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQA 66
           +++R+KG WSPEED LL+ LVQ++G RNWS+I +SI GRSGKSCRLRW NQL P+VE +A
Sbjct: 8   NMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRA 67

Query: 67  FTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFS------------ 126
           F+ EEDE I+ AHA+ GNKWATI+RLLNGRTDNAIKNHWNSTLKRK S            
Sbjct: 68  FSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSCDFGGNG 127

Query: 127 ----SIAEIK--TECTSHGSTISIGNQCL--SSSRSDTND-----------------SIP 186
               ++ E +      S G  +S G      S S SD ++                 +  
Sbjct: 128 GYDGNLGEEQPLKRTASGGGGVSTGLYMSPGSPSGSDVSEQSSGGAHVFKPTVRSEVTAS 187

Query: 187 SQNKRPSTRLSLSLPGTESSP-----------------------PRQQQQSISSLPEEAK 208
           S  + P T LSLSLP T+ +                        P ++++ +    EEAK
Sbjct: 188 SSGEDPPTYLSLSLPWTDETVRVNEPVQLNQNTVMDGGYTAELFPVRKEEQVEVEEEEAK 247

[Close]

BLAST of CmaCh04G004710 vs. ExPASy Swiss-Prot
Match: Q9FDW1 (Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.5e-42
Identity = 79/104 (75.96%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 9   DRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFT 68
           DR+KG WSPEED+ LR LV +YG RNW+VI +SI GRSGKSCRLRW NQL P VE + F+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
           AEEDE I  AHA+ GNKWATIARLLNGRTDNA+KNHWNSTLKRK
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of CmaCh04G004710 vs. ExPASy Swiss-Prot
Match: Q9SN12 (Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 9.4e-41
Identity = 79/113 (69.91%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 9   DRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFT 68
           DRVKG WS EED+ LR +V++YG RNWS I +SI GRSGKSCRLRW NQL P+VE + F+
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIKT 122
            EEDE IV A A+ GNKWATIARLLNGRTDNA+KNHWNSTLKRK S    + T
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSGGVAVTT 115

[Close]

BLAST of CmaCh04G004710 vs. ExPASy Swiss-Prot
Match: Q42575 (Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35
Identity = 84/176 (47.73%), Postives = 107/176 (60.80%), Query Frame = 0


Query: 9   DRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFT 68
           DRVKG WS EED +L  LV+R GARNWS I +SI GRSGKSCRLRW NQL P++ R +FT
Sbjct: 52  DRVKGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRNSFT 111

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIKTECTSHGS 128
             ED+ I+ AHA HGNKWA IA+LL GRTDNAIKNHWNS L+R+F    + K        
Sbjct: 112 EVEDQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALRRRFIDFEKAK-------- 171

Query: 129 TISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISSLPEE 185
            I  G+  +  S  D   ++ S  +  S+     +     SP  ++  +   + EE
Sbjct: 172 NIGTGSLVVDDSGFDRTTTVASSEETLSSGGGCHVTTPIVSPEGKEATTSMEMSEE 219

[Close]

BLAST of CmaCh04G004710 vs. ExPASy Swiss-Prot
Match: Q8H1P9 (Transcription factor MYB3R-3 OS=Arabidopsis thaliana OX=3702 GN=MYB3R3 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.8e-31
Identity = 59/104 (56.73%), Postives = 77/104 (74.04%), Query Frame = 0


Query: 9   DRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFT 68
           D +KG W+ EED+ +  LV++YG   WS+I QS+ GR GK CR RW N L PD+ + A+T
Sbjct: 127 DLIKGPWTHEEDEKIVELVEKYGPAKWSIIAQSLPGRIGKQCRERWHNHLNPDINKDAWT 186

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
            EE+  ++ AH  HGNKWA IA++L GRTDNAIKNHWNS+LK+K
Sbjct: 187 TEEEVALMNAHRSHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKK 230

[Close]

BLAST of CmaCh04G004710 vs. ExPASy TrEMBL
Match: A0A6J1IWV0 (transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111481371 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.8e-111
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120

Query: 121 TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS 180
           TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS
Sbjct: 121 TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS 180

Query: 181 LPEEAKAKSARCGKEFLSVMQLMIKEE 208
           LPEEAKAKSARCGKEFLSVMQLMIKEE
Sbjct: 181 LPEEAKAKSARCGKEFLSVMQLMIKEE 207

[Close]

BLAST of CmaCh04G004710 vs. ExPASy TrEMBL
Match: A0A6J1FV84 (transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111447156 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107
Identity = 203/209 (97.13%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKG WSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120

Query: 121 TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS 180
           TECTSHGSTISIGNQCLS SRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPR QQQSISS
Sbjct: 121 TECTSHGSTISIGNQCLSPSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRPQQQSISS 180

Query: 181 LPE--EAKAKSARCGKEFLSVMQLMIKEE 208
           LPE  EAKAKSARCGKEFLSVMQLMI+EE
Sbjct: 181 LPEDREAKAKSARCGKEFLSVMQLMIREE 209

[Close]

BLAST of CmaCh04G004710 vs. ExPASy TrEMBL
Match: A0A6J1JCR2 (transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111483237 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.7e-75
Identity = 153/210 (72.86%), Postives = 172/210 (81.90%), Query Frame = 0


Query: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           M S + +IDRVKG WSPEED++LR+LVQ  GARNWS+I QSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MGSRKGNIDRVKGPWSPEEDEMLRMLVQSQGARNWSIISQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120
            VER+AFTAEEDEVI EAHAK+GNKWATIARLLNGRTDNAIKNHWNSTLKRKF SIAE K
Sbjct: 61  GVERRAFTAEEDEVITEAHAKYGNKWATIARLLNGRTDNAIKNHWNSTLKRKFCSIAEKK 120

Query: 121 TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS 180
           T+C S GSTIS+ NQCLS S S+T+DSI S +  PST+L+LSLPG+E  P   QQQSISS
Sbjct: 121 TDCASQGSTISVSNQCLSPSGSETSDSIRSSDMEPSTQLTLSLPGSELWPV-TQQQSISS 180

Query: 181 LP---EEAKAKSARCGKEFLSVMQLMIKEE 208
            P   E+ K K    G+E L VMQ M+KEE
Sbjct: 181 SPRSEEKQKGKRTCFGEELLCVMQKMVKEE 209

[Close]

BLAST of CmaCh04G004710 vs. ExPASy TrEMBL
Match: A0A6J1E4J2 (transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111430691 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 2.0e-73
Identity = 153/211 (72.51%), Postives = 169/211 (80.09%), Query Frame = 0


Query: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           M S +  IDRVKG WSPEED++LR+LVQ  GARNWS+I QSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MGSRKGKIDRVKGPWSPEEDEMLRMLVQSQGARNWSIISQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120
            VER+AFTAEEDEVI EAHAK+GNKWATIARLLNGRTDNAIKNHWNSTLKRKF SIAE K
Sbjct: 61  GVERRAFTAEEDEVITEAHAKYGNKWATIARLLNGRTDNAIKNHWNSTLKRKFCSIAEKK 120

Query: 121 TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS 180
           T+C S GSTISI NQCLS S S+T+DSI S +  PST+L+LSLPG+E  P   QQQ ISS
Sbjct: 121 TDCASQGSTISISNQCLSPSGSETSDSIRSSDMEPSTQLTLSLPGSELWPV-TQQQCISS 180

Query: 181 LP----EEAKAKSARCGKEFLSVMQLMIKEE 208
            P    E+ K K     +E L VMQ MIKEE
Sbjct: 181 SPVKSEEKQKGKRTCFREELLCVMQKMIKEE 210

[Close]

BLAST of CmaCh04G004710 vs. ExPASy TrEMBL
Match: A0A6J1D686 (transcription factor MYB44-like OS=Momordica charantia OX=3673 GN=LOC111017660 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.8e-72
Identity = 151/212 (71.23%), Postives = 168/212 (79.25%), Query Frame = 0


Query: 7   DIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQA 66
           D+DRVKG WSPEED+LLR+LVQR+GARNWS I QSIHGRSGKSCRLRW NQL P +E + 
Sbjct: 3   DVDRVKGPWSPEEDELLRMLVQRHGARNWSAISQSIHGRSGKSCRLRWCNQLSPGLEHRP 62

Query: 67  FTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIA--------- 126
           FTAEEDE+IV AH ++GNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSI+         
Sbjct: 63  FTAEEDEIIVGAHTRYGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSISDYGGTAADE 122

Query: 127 --EIKTECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQ 186
             E KTECTS GSTIS+ N+CLS S SDT+DS PS N  PST+L+LSLPGT SSPPR +Q
Sbjct: 123 PPEKKTECTSQGSTISVSNRCLSPSGSDTSDSTPSLNIEPSTQLTLSLPGTYSSPPR-RQ 182

Query: 187 QSISSLPEEAKAKSARCGKEFLSVMQLMIKEE 208
           QSISS  EE   K    G EFLS MQ MI+EE
Sbjct: 183 QSISSPAEE---KRPNFGPEFLSAMQEMIREE 210

[Close]

BLAST of CmaCh04G004710 vs. NCBI nr
Match: XP_022982532.1 (transcription factor MYB44-like [Cucurbita maxima])

HSP 1 Score: 411.8 bits (1057), Expect = 3.7e-111
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120

Query: 121 TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS 180
           TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS
Sbjct: 121 TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS 180

Query: 181 LPEEAKAKSARCGKEFLSVMQLMIKEE 208
           LPEEAKAKSARCGKEFLSVMQLMIKEE
Sbjct: 181 LPEEAKAKSARCGKEFLSVMQLMIKEE 207

[Close]

BLAST of CmaCh04G004710 vs. NCBI nr
Match: XP_022941945.1 (transcription factor MYB44-like [Cucurbita moschata])

HSP 1 Score: 399.1 bits (1024), Expect = 2.5e-107
Identity = 203/209 (97.13%), Postives = 204/209 (97.61%), Query Frame = 0


Query: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKG WSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120

Query: 121 TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS 180
           TECTSHGSTISIGNQCLS SRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPR QQQSISS
Sbjct: 121 TECTSHGSTISIGNQCLSPSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRPQQQSISS 180

Query: 181 LPE--EAKAKSARCGKEFLSVMQLMIKEE 208
           LPE  EAKAKSARCGKEFLSVMQLMI+EE
Sbjct: 181 LPEDREAKAKSARCGKEFLSVMQLMIREE 209

[Close]

BLAST of CmaCh04G004710 vs. NCBI nr
Match: KAG7030966.1 (Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 395.6 bits (1015), Expect = 2.8e-106
Identity = 201/209 (96.17%), Postives = 203/209 (97.13%), Query Frame = 0


Query: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKG WSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120

Query: 121 TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS 180
           TECTSHGSTISIGNQCLS SRS TNDSIPSQNKRPSTRLSLSLPGTESSPPR QQQSISS
Sbjct: 121 TECTSHGSTISIGNQCLSPSRSGTNDSIPSQNKRPSTRLSLSLPGTESSPPRPQQQSISS 180

Query: 181 LPE--EAKAKSARCGKEFLSVMQLMIKEE 208
           LPE  EAKAKSARCGKEF+SVMQLMI+EE
Sbjct: 181 LPEDREAKAKSARCGKEFMSVMQLMIREE 209

[Close]

BLAST of CmaCh04G004710 vs. NCBI nr
Match: XP_023512939.1 (transcription factor MYB73-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 393.7 bits (1010), Expect = 1.1e-105
Identity = 201/209 (96.17%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKG WSPEEDQLLRILVQRYGARNWSVIGQSI GRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIQGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120

Query: 121 TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS 180
           TEC SHGSTISIGNQCLS SRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPR QQQSISS
Sbjct: 121 TECMSHGSTISIGNQCLSPSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRPQQQSISS 180

Query: 181 LPE--EAKAKSARCGKEFLSVMQLMIKEE 208
           LPE  EAKAKSARCGKEFLSVMQLMI+EE
Sbjct: 181 LPEDREAKAKSARCGKEFLSVMQLMIREE 209

[Close]

BLAST of CmaCh04G004710 vs. NCBI nr
Match: KAG6600306.1 (Transcription factor MYB73, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 346.3 bits (887), Expect = 1.9e-91
Identity = 180/209 (86.12%), Postives = 182/209 (87.08%), Query Frame = 0


Query: 1   MTSEEWDIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60
           MTSEEWDIDRVKG WSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP
Sbjct: 1   MTSEEWDIDRVKGPWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCP 60

Query: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120
           DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK
Sbjct: 61  DVERQAFTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIK 120

Query: 121 TECTSHGSTISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISS 180
           TECTSHGSTISIGNQCLS SRS                      GTESSPPR QQQSISS
Sbjct: 121 TECTSHGSTISIGNQCLSPSRS----------------------GTESSPPRPQQQSISS 180

Query: 181 LPE--EAKAKSARCGKEFLSVMQLMIKEE 208
           LPE  EAKAKSARCGKEF+SVMQLMI+EE
Sbjct: 181 LPEDREAKAKSARCGKEFMSVMQLMIREE 187

[Close]

BLAST of CmaCh04G004710 vs. TAIR 10
Match: AT4G37260.1 (myb domain protein 73 )

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-43
Identity = 112/261 (42.91%), Postives = 146/261 (55.94%), Query Frame = 0


Query: 7   DIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQA 66
           +++R+KG WSPEED LL+ LVQ++G RNWS+I +SI GRSGKSCRLRW NQL P+VE +A
Sbjct: 8   NMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRA 67

Query: 67  FTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFS------------ 126
           F+ EEDE I+ AHA+ GNKWATI+RLLNGRTDNAIKNHWNSTLKRK S            
Sbjct: 68  FSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRKCSVEGQSCDFGGNG 127

Query: 127 ----SIAEIK--TECTSHGSTISIGNQCL--SSSRSDTND-----------------SIP 186
               ++ E +      S G  +S G      S S SD ++                 +  
Sbjct: 128 GYDGNLGEEQPLKRTASGGGGVSTGLYMSPGSPSGSDVSEQSSGGAHVFKPTVRSEVTAS 187

Query: 187 SQNKRPSTRLSLSLPGTESSP-----------------------PRQQQQSISSLPEEAK 208
           S  + P T LSLSLP T+ +                        P ++++ +    EEAK
Sbjct: 188 SSGEDPPTYLSLSLPWTDETVRVNEPVQLNQNTVMDGGYTAELFPVRKEEQVEVEEEEAK 247

[Close]

BLAST of CmaCh04G004710 vs. TAIR 10
Match: AT2G23290.1 (myb domain protein 70 )

HSP 1 Score: 172.6 bits (436), Expect = 3.6e-43
Identity = 108/257 (42.02%), Postives = 143/257 (55.64%), Query Frame = 0


Query: 7   DIDRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQA 66
           ++DR+KG WSPEED LL+ LVQ++G RNWS+I +SI GRSGKSCRLRW NQL P+VE + 
Sbjct: 8   EMDRIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRG 67

Query: 67  FTAEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFS------------ 126
           FTAEED+ I+ AHA+ GNKWATIARLLNGRTDNAIKNHWNSTLKRK S            
Sbjct: 68  FTAEEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSGGGGGGEEGQSC 127

Query: 127 ------------------------------------SIAEIKTECTSHGSTISIGNQC-- 186
                                               + +++  +  S GS + + + C  
Sbjct: 128 DFGGNGGYDGNLTDEKPLKRRASGGGGVVVVTALSPTGSDVSEQSQSSGSVLPVSSSCHV 187

Query: 187 -LSSSRSD----TNDSIPSQNKRPSTRLSLSLPG-TESSPPRQQQQSISSLPEEAKAKSA 208
              ++R+      + S   + K P T L LSLP   ES+ P +         EE + + +
Sbjct: 188 FKPTARAGGVVIESSSPEEEEKDPMTCLRLSLPWVNESTTPPELFPVKREEEEEKEREIS 247

[Close]

BLAST of CmaCh04G004710 vs. TAIR 10
Match: AT5G67300.1 (myb domain protein r1 )

HSP 1 Score: 172.2 bits (435), Expect = 4.6e-43
Identity = 79/104 (75.96%), Postives = 88/104 (84.62%), Query Frame = 0


Query: 9   DRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFT 68
           DR+KG WSPEED+ LR LV +YG RNW+VI +SI GRSGKSCRLRW NQL P VE + F+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113
           AEEDE I  AHA+ GNKWATIARLLNGRTDNA+KNHWNSTLKRK
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]

BLAST of CmaCh04G004710 vs. TAIR 10
Match: AT3G50060.1 (myb domain protein 77 )

HSP 1 Score: 168.3 bits (425), Expect = 6.7e-42
Identity = 79/113 (69.91%), Postives = 90/113 (79.65%), Query Frame = 0


Query: 9   DRVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFT 68
           DRVKG WS EED+ LR +V++YG RNWS I +SI GRSGKSCRLRW NQL P+VE + F+
Sbjct: 3   DRVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFS 62

Query: 69  AEEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIKT 122
            EEDE IV A A+ GNKWATIARLLNGRTDNA+KNHWNSTLKRK S    + T
Sbjct: 63  PEEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSGGVAVTT 115

[Close]

BLAST of CmaCh04G004710 vs. TAIR 10
Match: AT3G55730.1 (myb domain protein 109 )

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-37
Identity = 83/176 (47.16%), Postives = 110/176 (62.50%), Query Frame = 0


Query: 10  RVKGQWSPEEDQLLRILVQRYGARNWSVIGQSIHGRSGKSCRLRWFNQLCPDVERQAFTA 69
           +VKG WS EED +L  LV++ G RNWS+I + I GRSGKSCRLRW NQL P ++R+ F+ 
Sbjct: 54  KVKGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSD 113

Query: 70  EEDEVIVEAHAKHGNKWATIARLLNGRTDNAIKNHWNSTLKRKFSSIAEIKTECTSHGST 129
           EED +I+ AHA HGNKWA IA+LL GRTDNAIKNHWNSTL+RK++ +        +  +T
Sbjct: 114 EEDRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRKYADLWNNGQWMANSVTT 173

Query: 130 ISIGNQCLSSSRSDTNDSIPSQNKRPSTRLSLSLPGTESSPPRQQQQSISSLPEEA 186
            S+            N+++      PS++  L      SSPP+  Q S   + E A
Sbjct: 174 ASV-----------KNENVDETTNPPSSKQQLPQGDINSSPPKPPQVSDVVMEEAA 218

The following BLAST results are available for this feature:

BLAST of CmaCh04G004710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23160	2.2e-42	42.91	Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1	[more]
Q9FDW1	6.5e-42	75.96	Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1	[more]
Q9SN12	9.4e-41	69.91	Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1	[more]
Q42575	2.0e-35	47.73	Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1	[more]
Q8H1P9	1.8e-31	56.73	Transcription factor MYB3R-3 OS=Arabidopsis thaliana OX=3702 GN=MYB3R3 PE=1 SV=1	[more]

BLAST of CmaCh04G004710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IWV0	1.8e-111	100.00	transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111481371 PE=4...	[more]
A0A6J1FV84	1.2e-107	97.13	transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111447156 PE...	[more]
A0A6J1JCR2	4.7e-75	72.86	transcription factor MYB44-like OS=Cucurbita maxima OX=3661 GN=LOC111483237 PE=4...	[more]
A0A6J1E4J2	2.0e-73	72.51	transcription factor MYB44-like OS=Cucurbita moschata OX=3662 GN=LOC111430691 PE...	[more]
A0A6J1D686	4.8e-72	71.23	transcription factor MYB44-like OS=Momordica charantia OX=3673 GN=LOC111017660 P...	[more]

BLAST of CmaCh04G004710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982532.1	3.7e-111	100.00	transcription factor MYB44-like [Cucurbita maxima]	[more]
XP_022941945.1	2.5e-107	97.13	transcription factor MYB44-like [Cucurbita moschata]	[more]
KAG7030966.1	2.8e-106	96.17	Transcription factor MYB44, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023512939.1	1.1e-105	96.17	transcription factor MYB73-like [Cucurbita pepo subsp. pepo]	[more]
KAG6600306.1	1.9e-91	86.12	Transcription factor MYB73, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh04G004710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37260.1	1.6e-43	42.91	myb domain protein 73	[more]
AT2G23290.1	3.6e-43	42.02	myb domain protein 70	[more]
AT5G67300.1	4.6e-43	75.96	myb domain protein r1	[more]
AT3G50060.1	6.7e-42	69.91	myb domain protein 77	[more]
AT3G55730.1	1.3e-37	47.16	myb domain protein 109	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 11..60 e-value: 7.5E-10 score: 48.7 coord: 63..111 e-value: 4.5E-16 score: 69.4
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 59..109 score: 9.779049
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 7..58 score: 11.207374
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 15..56 e-value: 6.66743E-12 score: 56.4298
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 66..109 e-value: 4.17728E-12 score: 56.815
None	No IPR available	GENE3D	1.10.10.60		coord: 11..63 e-value: 2.5E-21 score: 77.4
None	No IPR available	GENE3D	1.10.10.60		coord: 66..112 e-value: 1.7E-21 score: 77.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..187
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 5..191
None	No IPR available	PANTHER	PTHR45614:SF145	TRANSCRIPTION FACTOR MYB44-LIKE	coord: 5..191
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 64..107 e-value: 2.2E-16 score: 59.8 coord: 12..57 e-value: 8.0E-15 score: 54.8
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 60..113 score: 24.870438
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 7..58 score: 20.145815
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 9..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G004710.1	CmaCh04G004710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding