CmaCh04G004300 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTTTTCTTATTTTTGGAAAACTAAAATGAAACTATTTATTCTTCTTCTCCCGTTGAATTCCTTGGGAGGAAGAAAGTTCCAGCTCTGCTTCTAGTTCTACCTATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTACTCTTTCGTTCTCTCAGACGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAGGAGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATTCTCATAAGGAAAGCAATGGTAAGTTTTAGCCGGTTTTTCTTCTTCTTCTTCTTCTGATTCTGCTTGTTGCGGTCTTGTTTTTTGTTCTGTGTCTTTTTTTTCGTTCTCAGTGCATTTGCCTTGCTTGGATCTTCTTCATGAATTGATTTTCGTTATCATGGACTTCGTGTTGCTTATATTGAAGGCGAGAGATCGATTAGGCTACTAATTAACTTGTTTAGGTGAGGCAATAGTTCCATGGTGTGTGTTGTTCGGATGTTCCATCACTCTCACTCGTGAATGATCTTGCTCTTTTGAGACTCGTGCGAGCATTCATTCGGCTATTCTTTCGTCACTTCTGGTTTATCTTTCTCTGTGCATTTGCCTTGCTCGGATGTCTTGATGAATTGATGCTAGTGATCATTGACTTGAGCGAGAGATAGAGAGGCAATAAGTAGCTTAAGCCTTCGTTGAGGCAGAAGTTGCGTGGTGTAGTTTGTTGTTCAGATTGTCCGTCACTTCCGAATTTTCTTGTTCTGTTGATATTAGCTCAATCATGTAGCAAAATCGTACGAGACAAGATCCTTCCAGCCATTCGTCCGTCATTCCTTAAATCTCATTCTCTGTGCATTTTCCTTGTTTGGATATCTTGATGAATTGATGTTCGTTATTGTAGACATCGTTCTGCTTATTTATTTCGGAAGCGAGAAATGGAAACACAAAGGCATCAAGAGAGAGAATTCGGGAAGAACGGACGAATGGTTGGATGGACCTCGTACTATCTTGTTTTACCACATGCTTGTGCTACAGTCCACAGAATAAGGAAGTAGATGTTCATTATCATAGAGCTCATCTTGCTTAGTTTCAAAAGGCGAGAGTTAGGAGAGGCATCTAACTTTCTTAGAAGAGGCGGAAGTTGCACGGTGAAGTTTATTCAGCTGGTCCTAAATTTCTTAGTAATCATGTAGCAAAATTGTGCTAGTGTCCATCAAGCTATTTGAGTAAATGAGGAACGGAAGATGCTTGGGGGTACGCATAAGGATCGCTTAGTTGGCACTCTAATTCTGTTTGGAGCTTTATTTCTTGAGTCAACATATGCACAGCCGCAAAGATGAAATTTAAACCGGAATCTGAAAATTTAAGCTAAGAGTTTTGATGATGTTTATCATATTTTTAAAATTTAACCAAAATTTTTGTTCTTCAGCCAGAGAACACTTGGTAAATGGATAGAACCATCATTCCTACCAATATCTGTGTTAACCATGAATCTTAACTTGGTTTTTTATTGATCCAGTTGTTATAGTTAAAGCTTTTAGGGAGCTACATATCTGTACCAAGCCAACAGTTCTAGTACCCGTACTTGTATTAGAAGTGGTAGCTGGTTATGCTTGTTTAGATTGCTTGAACAGCTTGCTAAAGGTCGAATTGCTCCTTTGAGAAGCATTTCCATTTCGGACATTAGAGCTTTGTTCAGCCAGCGTAACAGTGGCATGGTTTCTGTAAGGCTTCCAAGTTTATCTTCCATGAACTTTCCAGGCAAGTCTCTTTTGAGTGCGTTATCTTCTTACCATGTTCATACTTGGCCTTTCTTCTTCGGTCTCATATAGAAGAACTTTTTTGTATTAGAGCATAGCTTTTAGAGTTCACCTGATTTGATGTTCCAAGAAAGTTTGTTTCTGCGTCAGTAGTAATGCTTCTACTAGTAGGTCTTTGTAGTCGGAATCTTTCACATTCTGAATCTTAGTTTTTGTTGATTCTAGGAGCCTGAAAATTCTCTTTTCTTGACTATTTTCTTGTACGTTTTTTTATGCATAAGCCGTACCTTCCCACTCAAGTTTGCCACAAGTAGCATACAAGAAGACTATATTGTTGATTTAGGGACCGGTTAAATCACCTTATTGCAGTTTATGGACAATGCTTTCAATTTCGAAAGACTCCTAGTATTTTCCAAGGTTAGTGAAAGCTTTATTTGGCTCTCCCACGATCTCTATAGAGGTCTGGTATGATAGAAATCTTTTGCCAATCTTATTTGTCATCAAGTTGACCAATCATAATATGCCCATATTATTCTCTGTTGTAGTTTGAATCAGTCAAACTATTGTAAAAGGTTTCCCCATTTCATTTGTGACTATTAATGGGCATGCATCACCTTCAAAAACCATCACAGCCGTGTGTGTGTATTCAGTATTATTACTTGAGTTGAATGTATTGAAGAATGTTTTCTGTTTGAGACCTTCGGTTATGTTAATTTAAGGTGTTATACATTACTTTTCTCAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAAAAGCACTGAATTTGAACTTGGTGGTGAGACGACGGGAGAAAACATAGATTTCTCTGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTATGATTTTATTTATTCGAGTTTATGAGTTATTCAAATTTCTAATTCATTATATCTGATCTGTTTTGATTTCTATTGTTCCCTTGCTTGAAGAGTTGTGACCAAAATAACCAGAATTTGGTGAACAATTAATGAAAATATTATTATCATTCACCAAGAACAATGAAAGACTGGCCGGCCATACAAACCAAAAGCTAAAGACGTAAGGAATCTATAAAAAAGAATTACAATAAGTTGTCGGCTCCAAAGTTGATAATCATCCAAAACAATTGGACGACCAAAAACTCTCTGGAGCAAAAGCATAAAGAAAAGCATTGTAGTGAGCCAAGCTCCAAAATATCCTACCATTATCTTTTTTTTCCCCATAAAAATCCTCATAAGTCTTTCTAACTTAATACTCCAAACAGCAACAAAGTAATCCACCTGCTGACTGCTGATGAACCTTTCCTTCGTTGGTAAAGGGAGGATGAAAATAATCTCAATTCTCATCCACACATCAGTGATTAGAAATGAAAGAAACACTCCAGATAATACACTAGATGTATTGAAAATTTTCTACCAAAGCTTCTCAGGAAACATGCATCCAAGAATGCTCTTTGGATGTGCCTGCTTGCAAAGATCACACCATTGAAGTCAAACTACCCAAGACAATTTTGAAGAAGTCCTTGATATTGATTCTCCCAAGGCAACCAGCCAAGAGCAGAATCTAAGGGTGTTGTTTGTTGGTGATATGATGGTATCTTCATAAAATATAAAATTACTAGTAGTTGCCGACTAAATATTAGGTTGAATATAAAGTTGTATTAATTAATTGATGAACATATTTTATGTCTCAACCACAAACTTTCCTCCATCCCTATAGCTCAACTAGAAAGATTTACTTTCTATAGGTATAGAAAAGCACCATCAAACATGAAGGCCAAGATAATCGAGAAATAATTAGTCAAGTTGTATTAGTTCTTATAAAAACAAAACGTACTTGTAAATTTTTTTTAAAGAGGTGTTACTTTGATACGCCAAGGATTGTAATCGGAATCCATCATAGAGAGGTTTGAAATTGAAGTATGCAGTATTTGAGCCTTCTACATGTCACTGGAACTGTATTCTATTATCAATCAAAAACCTAGGAAAAACTGGGGAAGTTCATTCCTAATTTTGTGCTGGAATGAACACAATCTGTGTGATCCATTCGTTAACATTATAACGATATCATTGGCAGAAGATCACCCTAGTTAAGAATGATTCTTGGCTCACTTCTAAAAGAGAGAACAGTTGCTATATGATTGCTTTAATTTCTTCTTTCTTGCATAATTTGCTCTACTTATTTCGTACTTTTTTCATTCCAATTTCAAGTGCTTATCATTTCTACGGCATATTTCAATCATCTATATTGTAGTTTGTGTTAGTAATCACAACCCTACACAATGATATAACATCATCCACTTTGAGAATAAACTCTCCTGATTTTGCTTTTCGCTCTCCTGAAAGGCTTCATACCAATAGAGATAGTATTTCTTACTTATAAACTCATAATCAATCCCTTAATTAGCCGATGTGGGACTCTTCACCCAACAATCCTCAACCGTTCGAACATGTTTAAGGTTAACATTGTTTTATTTGGTTTCAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACACTTGGAGGAACATTTTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTGCATTCTTTTTTGCTTTTTACTTTGTAAGGCTTCTTGAATTCTATATTAACATCCAAGTACTAAAGAGGAGCTAGACTTTGTGCTTGATTGCAAAGCCCTAGCTGAAAACTAACCATTCTGAAATATTTTGTTCCAATGCAGTTTTTTGGATCATCTTTTGTTCACGACGGCACCCAAACGCCACCCTCTCCTCCACCGTATGTTTATCCATATGCTCCTTTAGAAGACGAAAGGATTTCACAAATAGCTCCTCGTGTAAATTGACTGGTACCCATATAATCCTAATTGGTTGGTTTTCTGCTACTTACTTTTCCCTTTCGCAATATTGATTCCTGTCCTTGCAATATTATGTATATATGAAAATGATTTTTAGCTAGAATTTTCTTGTTTACACTTTTTTTGGTTAGGATCTTTTTGTTTACTCTATGCGGGTGAGAATTTGAATATCTGACGACTTTTATGAGGAGC TGTTTTCTTATTTTTGGAAAACTAAAATGAAACTATTTATTCTTCTTCTCCCGTTGAATTCCTTGGGAGGAAGAAAGTTCCAGCTCTGCTTCTAGTTCTACCTATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTACTCTTTCGTTCTCTCAGACGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAGGAGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATTCTCATAAGGAAAGCAATGACATCGTTCTGCTTATTTATTTCGGAAGCGAGAAATGGAAACACAAAGGCATCAAGAGAGAGAATTCGGGAAGAACGGACGAATGATTGCTTGAACAGCTTGCTAAAGGTCGAATTGCTCCTTTGAGAAGCATTTCCATTTCGGACATTAGAGCTTTGTTCAGCCAGCGTAACAGTGGCATGGTTTCTGTAAGGCTTCCAAGTTTATCTTCCATGAACTTTCCAGGCAAGGACCGGTTAAATCACCTTATTGCAGTTTATGGACAATGCTTTCAATTTCGAAAGACTCCTAGTATTTTCCAAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAAAAGCACTGAATTTGAACTTGGTGGTGAGACGACGGGAGAAAACATAGATTTCTCTGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACACTTGGAGGAACATTTTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTGCATTCTTTTTTGCTTTTTACTTTTTTTTTGGATCATCTTTTGTTCACGACGGCACCCAAACGCCACCCTCTCCTCCACCGTATGTTTATCCATATGCTCCTTTAGAAGACGAAAGGATTTCACAAATAGCTCCTCGTGTAAATTGACTGGTACCCATATAATCCTAATTGGTTGGTTTTCTGCTACTTACTTTTCCCTTTCGCAATATTGATTCCTGTCCTTGCAATATTATGTATATATGAAAATGATTTTTAGCTAGAATTTTCTTGTTTACACTTTTTTTGGTTAGGATCTTTTTGTTTACTCTATGCGGGTGAGAATTTGAATATCTGACGACTTTTATGAGGAGC ATGGTTTCTGTAAGGCTTCCAAGTTTATCTTCCATGAACTTTCCAGGCAAGGACCGGTTAAATCACCTTATTGCAGTTTATGGACAATGCTTTCAATTTCGAAAGACTCCTAGTATTTTCCAAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAAAAGCACTGAATTTGAACTTGGTGGTGAGACGACGGGAGAAAACATAGATTTCTCTGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACACTTGGAGGAACATTTTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTGCATTCTTTTTTGCTTTTTACTTTTTTTTTGGATCATCTTTTGTTCACGACGGCACCCAAACGCCACCCTCTCCTCCACCGTATGTTTATCCATATGCTCCTTTAGAAGACGAAAGGATTTCACAAATAGCTCCTCGTGTAAATTGA MVSVRLPSLSSMNFPGKDRLNHLIAVYGQCFQFRKTPSIFQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN Homology
BLAST of CmaCh04G004300 vs. ExPASy TrEMBL
Match: A0A6J1JSC6 (uncharacterized protein LOC111488465 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111488465 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 3.3e-80 Identity = 166/192 (86.46%), Postives = 166/192 (86.46%), Query Frame = 0
BLAST of CmaCh04G004300 vs. ExPASy TrEMBL
Match: A0A6J1JUF8 (uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488465 PE=4 SV=1) HSP 1 Score: 293.5 bits (750), Expect = 6.4e-76 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of CmaCh04G004300 vs. ExPASy TrEMBL
Match: A0A6J1FP04 (uncharacterized protein LOC111447509 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111447509 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 5.8e-69 Identity = 140/153 (91.50%), Postives = 143/153 (93.46%), Query Frame = 0
BLAST of CmaCh04G004300 vs. ExPASy TrEMBL
Match: A0A6J1FRG9 (uncharacterized protein LOC111447509 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447509 PE=4 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 2.2e-68 Identity = 139/151 (92.05%), Postives = 142/151 (94.04%), Query Frame = 0
BLAST of CmaCh04G004300 vs. ExPASy TrEMBL
Match: A0A6J1JBV1 (uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.4e-62 Identity = 130/151 (86.09%), Postives = 137/151 (90.73%), Query Frame = 0
BLAST of CmaCh04G004300 vs. NCBI nr
Match: XP_022991996.1 (uncharacterized protein LOC111488465 isoform X3 [Cucurbita maxima]) HSP 1 Score: 307.8 bits (787), Expect = 6.8e-80 Identity = 166/192 (86.46%), Postives = 166/192 (86.46%), Query Frame = 0
BLAST of CmaCh04G004300 vs. NCBI nr
Match: XP_022991980.1 (uncharacterized protein LOC111488465 isoform X1 [Cucurbita maxima]) HSP 1 Score: 293.5 bits (750), Expect = 1.3e-75 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of CmaCh04G004300 vs. NCBI nr
Match: XP_023532257.1 (uncharacterized protein LOC111794456 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 281.2 bits (718), Expect = 6.8e-72 Identity = 144/151 (95.36%), Postives = 147/151 (97.35%), Query Frame = 0
BLAST of CmaCh04G004300 vs. NCBI nr
Match: XP_022942491.1 (uncharacterized protein LOC111447509 isoform X3 [Cucurbita moschata]) HSP 1 Score: 270.4 bits (690), Expect = 1.2e-68 Identity = 140/153 (91.50%), Postives = 143/153 (93.46%), Query Frame = 0
BLAST of CmaCh04G004300 vs. NCBI nr
Match: XP_022942489.1 (uncharacterized protein LOC111447509 isoform X1 [Cucurbita moschata]) HSP 1 Score: 268.5 bits (685), Expect = 4.5e-68 Identity = 139/151 (92.05%), Postives = 142/151 (94.04%), Query Frame = 0
BLAST of CmaCh04G004300 vs. TAIR 10
Match: AT1G50020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 185.3 bits (469), Expect = 4.7e-47 Identity = 98/153 (64.05%), Postives = 123/153 (80.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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