CmaCh04G004300 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G004300
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionTubulin alpha chain
LocationCma_Chr04: 2200956 .. 2205924 (+)
RNA-Seq ExpressionCmaCh04G004300
SyntenyCmaCh04G004300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTTTCTTATTTTTGGAAAACTAAAATGAAACTATTTATTCTTCTTCTCCCGTTGAATTCCTTGGGAGGAAGAAAGTTCCAGCTCTGCTTCTAGTTCTACCTATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTACTCTTTCGTTCTCTCAGACGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAGGAGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATTCTCATAAGGAAAGCAATGGTAAGTTTTAGCCGGTTTTTCTTCTTCTTCTTCTTCTGATTCTGCTTGTTGCGGTCTTGTTTTTTGTTCTGTGTCTTTTTTTTCGTTCTCAGTGCATTTGCCTTGCTTGGATCTTCTTCATGAATTGATTTTCGTTATCATGGACTTCGTGTTGCTTATATTGAAGGCGAGAGATCGATTAGGCTACTAATTAACTTGTTTAGGTGAGGCAATAGTTCCATGGTGTGTGTTGTTCGGATGTTCCATCACTCTCACTCGTGAATGATCTTGCTCTTTTGAGACTCGTGCGAGCATTCATTCGGCTATTCTTTCGTCACTTCTGGTTTATCTTTCTCTGTGCATTTGCCTTGCTCGGATGTCTTGATGAATTGATGCTAGTGATCATTGACTTGAGCGAGAGATAGAGAGGCAATAAGTAGCTTAAGCCTTCGTTGAGGCAGAAGTTGCGTGGTGTAGTTTGTTGTTCAGATTGTCCGTCACTTCCGAATTTTCTTGTTCTGTTGATATTAGCTCAATCATGTAGCAAAATCGTACGAGACAAGATCCTTCCAGCCATTCGTCCGTCATTCCTTAAATCTCATTCTCTGTGCATTTTCCTTGTTTGGATATCTTGATGAATTGATGTTCGTTATTGTAGACATCGTTCTGCTTATTTATTTCGGAAGCGAGAAATGGAAACACAAAGGCATCAAGAGAGAGAATTCGGGAAGAACGGACGAATGGTTGGATGGACCTCGTACTATCTTGTTTTACCACATGCTTGTGCTACAGTCCACAGAATAAGGAAGTAGATGTTCATTATCATAGAGCTCATCTTGCTTAGTTTCAAAAGGCGAGAGTTAGGAGAGGCATCTAACTTTCTTAGAAGAGGCGGAAGTTGCACGGTGAAGTTTATTCAGCTGGTCCTAAATTTCTTAGTAATCATGTAGCAAAATTGTGCTAGTGTCCATCAAGCTATTTGAGTAAATGAGGAACGGAAGATGCTTGGGGGTACGCATAAGGATCGCTTAGTTGGCACTCTAATTCTGTTTGGAGCTTTATTTCTTGAGTCAACATATGCACAGCCGCAAAGATGAAATTTAAACCGGAATCTGAAAATTTAAGCTAAGAGTTTTGATGATGTTTATCATATTTTTAAAATTTAACCAAAATTTTTGTTCTTCAGCCAGAGAACACTTGGTAAATGGATAGAACCATCATTCCTACCAATATCTGTGTTAACCATGAATCTTAACTTGGTTTTTTATTGATCCAGTTGTTATAGTTAAAGCTTTTAGGGAGCTACATATCTGTACCAAGCCAACAGTTCTAGTACCCGTACTTGTATTAGAAGTGGTAGCTGGTTATGCTTGTTTAGATTGCTTGAACAGCTTGCTAAAGGTCGAATTGCTCCTTTGAGAAGCATTTCCATTTCGGACATTAGAGCTTTGTTCAGCCAGCGTAACAGTGGCATGGTTTCTGTAAGGCTTCCAAGTTTATCTTCCATGAACTTTCCAGGCAAGTCTCTTTTGAGTGCGTTATCTTCTTACCATGTTCATACTTGGCCTTTCTTCTTCGGTCTCATATAGAAGAACTTTTTTGTATTAGAGCATAGCTTTTAGAGTTCACCTGATTTGATGTTCCAAGAAAGTTTGTTTCTGCGTCAGTAGTAATGCTTCTACTAGTAGGTCTTTGTAGTCGGAATCTTTCACATTCTGAATCTTAGTTTTTGTTGATTCTAGGAGCCTGAAAATTCTCTTTTCTTGACTATTTTCTTGTACGTTTTTTTATGCATAAGCCGTACCTTCCCACTCAAGTTTGCCACAAGTAGCATACAAGAAGACTATATTGTTGATTTAGGGACCGGTTAAATCACCTTATTGCAGTTTATGGACAATGCTTTCAATTTCGAAAGACTCCTAGTATTTTCCAAGGTTAGTGAAAGCTTTATTTGGCTCTCCCACGATCTCTATAGAGGTCTGGTATGATAGAAATCTTTTGCCAATCTTATTTGTCATCAAGTTGACCAATCATAATATGCCCATATTATTCTCTGTTGTAGTTTGAATCAGTCAAACTATTGTAAAAGGTTTCCCCATTTCATTTGTGACTATTAATGGGCATGCATCACCTTCAAAAACCATCACAGCCGTGTGTGTGTATTCAGTATTATTACTTGAGTTGAATGTATTGAAGAATGTTTTCTGTTTGAGACCTTCGGTTATGTTAATTTAAGGTGTTATACATTACTTTTCTCAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAAAAGCACTGAATTTGAACTTGGTGGTGAGACGACGGGAGAAAACATAGATTTCTCTGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGTTAATTTCCTTATGATTTTATTTATTCGAGTTTATGAGTTATTCAAATTTCTAATTCATTATATCTGATCTGTTTTGATTTCTATTGTTCCCTTGCTTGAAGAGTTGTGACCAAAATAACCAGAATTTGGTGAACAATTAATGAAAATATTATTATCATTCACCAAGAACAATGAAAGACTGGCCGGCCATACAAACCAAAAGCTAAAGACGTAAGGAATCTATAAAAAAGAATTACAATAAGTTGTCGGCTCCAAAGTTGATAATCATCCAAAACAATTGGACGACCAAAAACTCTCTGGAGCAAAAGCATAAAGAAAAGCATTGTAGTGAGCCAAGCTCCAAAATATCCTACCATTATCTTTTTTTTCCCCATAAAAATCCTCATAAGTCTTTCTAACTTAATACTCCAAACAGCAACAAAGTAATCCACCTGCTGACTGCTGATGAACCTTTCCTTCGTTGGTAAAGGGAGGATGAAAATAATCTCAATTCTCATCCACACATCAGTGATTAGAAATGAAAGAAACACTCCAGATAATACACTAGATGTATTGAAAATTTTCTACCAAAGCTTCTCAGGAAACATGCATCCAAGAATGCTCTTTGGATGTGCCTGCTTGCAAAGATCACACCATTGAAGTCAAACTACCCAAGACAATTTTGAAGAAGTCCTTGATATTGATTCTCCCAAGGCAACCAGCCAAGAGCAGAATCTAAGGGTGTTGTTTGTTGGTGATATGATGGTATCTTCATAAAATATAAAATTACTAGTAGTTGCCGACTAAATATTAGGTTGAATATAAAGTTGTATTAATTAATTGATGAACATATTTTATGTCTCAACCACAAACTTTCCTCCATCCCTATAGCTCAACTAGAAAGATTTACTTTCTATAGGTATAGAAAAGCACCATCAAACATGAAGGCCAAGATAATCGAGAAATAATTAGTCAAGTTGTATTAGTTCTTATAAAAACAAAACGTACTTGTAAATTTTTTTTAAAGAGGTGTTACTTTGATACGCCAAGGATTGTAATCGGAATCCATCATAGAGAGGTTTGAAATTGAAGTATGCAGTATTTGAGCCTTCTACATGTCACTGGAACTGTATTCTATTATCAATCAAAAACCTAGGAAAAACTGGGGAAGTTCATTCCTAATTTTGTGCTGGAATGAACACAATCTGTGTGATCCATTCGTTAACATTATAACGATATCATTGGCAGAAGATCACCCTAGTTAAGAATGATTCTTGGCTCACTTCTAAAAGAGAGAACAGTTGCTATATGATTGCTTTAATTTCTTCTTTCTTGCATAATTTGCTCTACTTATTTCGTACTTTTTTCATTCCAATTTCAAGTGCTTATCATTTCTACGGCATATTTCAATCATCTATATTGTAGTTTGTGTTAGTAATCACAACCCTACACAATGATATAACATCATCCACTTTGAGAATAAACTCTCCTGATTTTGCTTTTCGCTCTCCTGAAAGGCTTCATACCAATAGAGATAGTATTTCTTACTTATAAACTCATAATCAATCCCTTAATTAGCCGATGTGGGACTCTTCACCCAACAATCCTCAACCGTTCGAACATGTTTAAGGTTAACATTGTTTTATTTGGTTTCAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACACTTGGAGGAACATTTTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTGCATTCTTTTTTGCTTTTTACTTTGTAAGGCTTCTTGAATTCTATATTAACATCCAAGTACTAAAGAGGAGCTAGACTTTGTGCTTGATTGCAAAGCCCTAGCTGAAAACTAACCATTCTGAAATATTTTGTTCCAATGCAGTTTTTTGGATCATCTTTTGTTCACGACGGCACCCAAACGCCACCCTCTCCTCCACCGTATGTTTATCCATATGCTCCTTTAGAAGACGAAAGGATTTCACAAATAGCTCCTCGTGTAAATTGACTGGTACCCATATAATCCTAATTGGTTGGTTTTCTGCTACTTACTTTTCCCTTTCGCAATATTGATTCCTGTCCTTGCAATATTATGTATATATGAAAATGATTTTTAGCTAGAATTTTCTTGTTTACACTTTTTTTGGTTAGGATCTTTTTGTTTACTCTATGCGGGTGAGAATTTGAATATCTGACGACTTTTATGAGGAGC

mRNA sequence

TGTTTTCTTATTTTTGGAAAACTAAAATGAAACTATTTATTCTTCTTCTCCCGTTGAATTCCTTGGGAGGAAGAAAGTTCCAGCTCTGCTTCTAGTTCTACCTATGGCTGCTCTGCAAATTCTCAAATCAACTGTCTCTACTCTTTCGTTCTCTCAGACGAGTTTTGGCGTCCAATCGAGCCGGTTCTTCACGGAGTTGGATTCCTCGAGGAGGTCTGTACGGTTCCATGGCCGTCGGAGAAGTTTGAGATATGGCTGCGTTTGTAGGAGGTTGAGTTTCCGTTGCGCTGCTCAGGATTCTCATAAGGAAAGCAATGACATCGTTCTGCTTATTTATTTCGGAAGCGAGAAATGGAAACACAAAGGCATCAAGAGAGAGAATTCGGGAAGAACGGACGAATGATTGCTTGAACAGCTTGCTAAAGGTCGAATTGCTCCTTTGAGAAGCATTTCCATTTCGGACATTAGAGCTTTGTTCAGCCAGCGTAACAGTGGCATGGTTTCTGTAAGGCTTCCAAGTTTATCTTCCATGAACTTTCCAGGCAAGGACCGGTTAAATCACCTTATTGCAGTTTATGGACAATGCTTTCAATTTCGAAAGACTCCTAGTATTTTCCAAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAAAAGCACTGAATTTGAACTTGGTGGTGAGACGACGGGAGAAAACATAGATTTCTCTGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACACTTGGAGGAACATTTTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTGCATTCTTTTTTGCTTTTTACTTTTTTTTTGGATCATCTTTTGTTCACGACGGCACCCAAACGCCACCCTCTCCTCCACCGTATGTTTATCCATATGCTCCTTTAGAAGACGAAAGGATTTCACAAATAGCTCCTCGTGTAAATTGACTGGTACCCATATAATCCTAATTGGTTGGTTTTCTGCTACTTACTTTTCCCTTTCGCAATATTGATTCCTGTCCTTGCAATATTATGTATATATGAAAATGATTTTTAGCTAGAATTTTCTTGTTTACACTTTTTTTGGTTAGGATCTTTTTGTTTACTCTATGCGGGTGAGAATTTGAATATCTGACGACTTTTATGAGGAGC

Coding sequence (CDS)

ATGGTTTCTGTAAGGCTTCCAAGTTTATCTTCCATGAACTTTCCAGGCAAGGACCGGTTAAATCACCTTATTGCAGTTTATGGACAATGCTTTCAATTTCGAAAGACTCCTAGTATTTTCCAAGGAGAAGAACCTCCAGAATCATTATTCATGAAGGAGCTGAAGAAGAGAGGTATAACTCCCACTTCCTTGCTTGAGGATACTAAAAGCACTGAATTTGAACTTGGTGGTGAGACGACGGGAGAAAACATAGATTTCTCTGGTACAAGTGCTGTTTCAACTGAAGTTAGCAAGAGCCTATCCAATCAAAGGGAGCGTTCCATGCAATTGAACAGTGAAGGCCTTGAGGGGTTGATCCCTCGTGCTAAACTTTTGCTAACACTTGGAGGAACATTTTTCTTAGGATTCTGGCCGTTGATCGTCATCACTGTTGCATTCTTTTTTGCTTTTTACTTTTTTTTTGGATCATCTTTTGTTCACGACGGCACCCAAACGCCACCCTCTCCTCCACCGTATGTTTATCCATATGCTCCTTTAGAAGACGAAAGGATTTCACAAATAGCTCCTCGTGTAAATTGA

Protein sequence

MVSVRLPSLSSMNFPGKDRLNHLIAVYGQCFQFRKTPSIFQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Homology
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BLAST of CmaCh04G004300 vs. ExPASy TrEMBL
Match: A0A6J1JSC6 (uncharacterized protein LOC111488465 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111488465 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.3e-80
Identity = 166/192 (86.46%), Postives = 166/192 (86.46%), Query Frame = 0 

Query: 1   MVSVRLPSLSSMNFPGKDRLNHLIAVYGQCFQFRKTPSIFQGEEPPESLFMKELKKRGIT 60
           MVSVRLPSLSSMNFP                          GEEPPESLFMKELKKRGIT
Sbjct: 1   MVSVRLPSLSSMNFP--------------------------GEEPPESLFMKELKKRGIT 60

Query: 61  PTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIP 120
           PTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIP
Sbjct: 61  PTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIP 120

Query: 121 RAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLE 180
           RAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLE
Sbjct: 121 RAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLE 166

Query: 181 DERISQIAPRVN 193
           DERISQIAPRVN
Sbjct: 181 DERISQIAPRVN 166

[Close]
BLAST of CmaCh04G004300 vs. ExPASy TrEMBL
Match: A0A6J1JUF8 (uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488465 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 6.4e-76
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 42  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS 101
           GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS
Sbjct: 72  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS 131

Query: 102 NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHD 161
           NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHD
Sbjct: 132 NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHD 191

Query: 162 GTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           GTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Sbjct: 192 GTQTPPSPPPYVYPYAPLEDERISQIAPRVN 222

[Close]
BLAST of CmaCh04G004300 vs. ExPASy TrEMBL
Match: A0A6J1FP04 (uncharacterized protein LOC111447509 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111447509 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 5.8e-69
Identity = 140/153 (91.50%), Postives = 143/153 (93.46%), Query Frame = 0 

Query: 40  FQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKS 99
           F GEEPPESLFMKELKKRGI PTSLLEDT STEFELG E TG ++D SGTSAVSTEVSKS
Sbjct: 3   FPGEEPPESLFMKELKKRGIAPTSLLEDTNSTEFELGVEATGGSLDLSGTSAVSTEVSKS 62

Query: 100 LSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFV 159
           LSNQ ERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITV+ FFA YFFFGSSFV
Sbjct: 63  LSNQMERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVSLFFALYFFFGSSFV 122

Query: 160 HDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           HDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Sbjct: 123 HDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN 155

[Close]
BLAST of CmaCh04G004300 vs. ExPASy TrEMBL
Match: A0A6J1FRG9 (uncharacterized protein LOC111447509 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447509 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 2.2e-68
Identity = 139/151 (92.05%), Postives = 142/151 (94.04%), Query Frame = 0 

Query: 42  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS 101
           GEEPPESLFMKELKKRGI PTSLLEDT STEFELG E TG ++D SGTSAVSTEVSKSLS
Sbjct: 72  GEEPPESLFMKELKKRGIAPTSLLEDTNSTEFELGVEATGGSLDLSGTSAVSTEVSKSLS 131

Query: 102 NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHD 161
           NQ ERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITV+ FFA YFFFGSSFVHD
Sbjct: 132 NQMERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVSLFFALYFFFGSSFVHD 191

Query: 162 GTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           GTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Sbjct: 192 GTQTPPSPPPYVYPYAPLEDERISQIAPRVN 222

[Close]
BLAST of CmaCh04G004300 vs. ExPASy TrEMBL
Match: A0A6J1JBV1 (uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048 PE=4 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 1.4e-62
Identity = 130/151 (86.09%), Postives = 137/151 (90.73%), Query Frame = 0 

Query: 42  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS 101
           GEEPPESLFMKELKKRGITPTSLLEDT +T+F LGGE  GEN DFS  SAVSTEV KSLS
Sbjct: 72  GEEPPESLFMKELKKRGITPTSLLEDTSNTDFGLGGEMKGENRDFSRRSAVSTEVDKSLS 131

Query: 102 NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHD 161
           NQRERSMQLNSEGLEGLIPRAKLLLT+GGTFFLGFWPLIV+TV+FFFA YFF G SFVHD
Sbjct: 132 NQRERSMQLNSEGLEGLIPRAKLLLTIGGTFFLGFWPLIVVTVSFFFALYFFLGPSFVHD 191

Query: 162 GTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           GT+TP SPPPYV PYA LEDERISQ+APRVN
Sbjct: 192 GTKTPISPPPYVDPYALLEDERISQMAPRVN 222

[Close]
BLAST of CmaCh04G004300 vs. NCBI nr
Match: XP_022991996.1 (uncharacterized protein LOC111488465 isoform X3 [Cucurbita maxima])

HSP 1 Score: 307.8 bits (787), Expect = 6.8e-80
Identity = 166/192 (86.46%), Postives = 166/192 (86.46%), Query Frame = 0 

Query: 1   MVSVRLPSLSSMNFPGKDRLNHLIAVYGQCFQFRKTPSIFQGEEPPESLFMKELKKRGIT 60
           MVSVRLPSLSSMNFP                          GEEPPESLFMKELKKRGIT
Sbjct: 1   MVSVRLPSLSSMNFP--------------------------GEEPPESLFMKELKKRGIT 60

Query: 61  PTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIP 120
           PTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIP
Sbjct: 61  PTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLSNQRERSMQLNSEGLEGLIP 120

Query: 121 RAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLE 180
           RAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLE
Sbjct: 121 RAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHDGTQTPPSPPPYVYPYAPLE 166

Query: 181 DERISQIAPRVN 193
           DERISQIAPRVN
Sbjct: 181 DERISQIAPRVN 166

[Close]
BLAST of CmaCh04G004300 vs. NCBI nr
Match: XP_022991980.1 (uncharacterized protein LOC111488465 isoform X1 [Cucurbita maxima])

HSP 1 Score: 293.5 bits (750), Expect = 1.3e-75
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0 

Query: 42  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS 101
           GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS
Sbjct: 72  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS 131

Query: 102 NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHD 161
           NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHD
Sbjct: 132 NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHD 191

Query: 162 GTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           GTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Sbjct: 192 GTQTPPSPPPYVYPYAPLEDERISQIAPRVN 222

[Close]
BLAST of CmaCh04G004300 vs. NCBI nr
Match: XP_023532257.1 (uncharacterized protein LOC111794456 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281.2 bits (718), Expect = 6.8e-72
Identity = 144/151 (95.36%), Postives = 147/151 (97.35%), Query Frame = 0 

Query: 42  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS 101
           GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS
Sbjct: 72  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS 131

Query: 102 NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHD 161
           NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIV+T++ FFA  FFFGSSFVHD
Sbjct: 132 NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVVTISLFFALDFFFGSSFVHD 191

Query: 162 GTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           G QTPPSPPPYVYPYAPLEDERISQIAPRVN
Sbjct: 192 GNQTPPSPPPYVYPYAPLEDERISQIAPRVN 222

[Close]
BLAST of CmaCh04G004300 vs. NCBI nr
Match: XP_022942491.1 (uncharacterized protein LOC111447509 isoform X3 [Cucurbita moschata])

HSP 1 Score: 270.4 bits (690), Expect = 1.2e-68
Identity = 140/153 (91.50%), Postives = 143/153 (93.46%), Query Frame = 0 

Query: 40  FQGEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKS 99
           F GEEPPESLFMKELKKRGI PTSLLEDT STEFELG E TG ++D SGTSAVSTEVSKS
Sbjct: 3   FPGEEPPESLFMKELKKRGIAPTSLLEDTNSTEFELGVEATGGSLDLSGTSAVSTEVSKS 62

Query: 100 LSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFV 159
           LSNQ ERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITV+ FFA YFFFGSSFV
Sbjct: 63  LSNQMERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVSLFFALYFFFGSSFV 122

Query: 160 HDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           HDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Sbjct: 123 HDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN 155

[Close]
BLAST of CmaCh04G004300 vs. NCBI nr
Match: XP_022942489.1 (uncharacterized protein LOC111447509 isoform X1 [Cucurbita moschata])

HSP 1 Score: 268.5 bits (685), Expect = 4.5e-68
Identity = 139/151 (92.05%), Postives = 142/151 (94.04%), Query Frame = 0 

Query: 42  GEEPPESLFMKELKKRGITPTSLLEDTKSTEFELGGETTGENIDFSGTSAVSTEVSKSLS 101
           GEEPPESLFMKELKKRGI PTSLLEDT STEFELG E TG ++D SGTSAVSTEVSKSLS
Sbjct: 72  GEEPPESLFMKELKKRGIAPTSLLEDTNSTEFELGVEATGGSLDLSGTSAVSTEVSKSLS 131

Query: 102 NQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFVHD 161
           NQ ERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITV+ FFA YFFFGSSFVHD
Sbjct: 132 NQMERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVSLFFALYFFFGSSFVHD 191

Query: 162 GTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           GTQTPPSPPPYVYPYAPLEDERISQIAPRVN
Sbjct: 192 GTQTPPSPPPYVYPYAPLEDERISQIAPRVN 222

[Close]
BLAST of CmaCh04G004300 vs. TAIR 10
Match: AT1G50020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 185.3 bits (469), Expect = 4.7e-47
Identity = 98/153 (64.05%), Postives = 123/153 (80.39%), Query Frame = 0 

Query: 41  QGEEPPESLFMKELKKRGITPTSLLEDTKSTEFEL-GGETTGENIDFSGTSAVSTEVSKS 100
           +GEEPPESLFMKELK+RG+TPTSLL+D +  + E+  G+ TG +   S T+A +    KS
Sbjct: 60  KGEEPPESLFMKELKRRGMTPTSLLQDYEVDQDEIKTGKETGNS---SKTTATTPAFDKS 119

Query: 101 LSNQRERSMQLNSEGLEGLIPRAKLLLTLGGTFFLGFWPLIVITVAFFFAFYFFFGSSFV 160
           L NQRERS+ LNSEGLEGLIPRA++LLT+GGTFFLGFWPLIV+T+  F A Y +FG+ F+
Sbjct: 120 LLNQRERSLALNSEGLEGLIPRARILLTIGGTFFLGFWPLIVLTLGAFSALYLYFGADFI 179

Query: 161 HDGTQTPPSPPPYVYPYAPLEDERISQIAPRVN 193
           HDG++TP SPPPY+ PYA LEDERIS + PR+N
Sbjct: 180 HDGSRTPVSPPPYIDPYALLEDERISGMDPRLN 209

The following BLAST results are available for this feature:
BLAST of CmaCh04G004300 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh04G004300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JSC63.3e-8086.46uncharacterized protein LOC111488465 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1JUF86.4e-76100.00uncharacterized protein LOC111488465 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FP045.8e-6991.50uncharacterized protein LOC111447509 isoform X3 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1FRG92.2e-6892.05uncharacterized protein LOC111447509 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JBV11.4e-6286.09uncharacterized protein LOC111483048 OS=Cucurbita maxima OX=3661 GN=LOC111483048... [more]
BLAST of CmaCh04G004300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022991996.16.8e-8086.46uncharacterized protein LOC111488465 isoform X3 [Cucurbita maxima][more]
XP_022991980.11.3e-75100.00uncharacterized protein LOC111488465 isoform X1 [Cucurbita maxima][more]
XP_023532257.16.8e-7295.36uncharacterized protein LOC111794456 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022942491.11.2e-6891.50uncharacterized protein LOC111447509 isoform X3 [Cucurbita moschata][more]
XP_022942489.14.5e-6892.05uncharacterized protein LOC111447509 isoform X1 [Cucurbita moschata][more]
BLAST of CmaCh04G004300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G50020.14.7e-4764.05unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35699F2J10.10 PROTEINcoord: 39..192

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G004300.1CmaCh04G004300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane