CmaCh04G000830 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G000830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	B box-type domain-containing protein
Location	Cma_Chr04: 414220 .. 416780 (+)
RNA-Seq Expression	CmaCh04G000830
Synteny	CmaCh04G000830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATCCTAAAGATTTCTGTTTCCATTTTCACTTTAATCTTCGTTCTTCCTCTTCTTCCTTCCTCCATTTGCAGAGCTTAATCCAATTTGTCCGCCGCTTCCTCTGTGTCCTTGTACTGGTTTCAGTCTTCGTCCTGCAATCGGAAGAATCTGTGAGTATTTTAGTCCTTTTCGGTGAATGTGTAGTTTTCGAACTCTTTTTCTTTCGTTTTTGTTTGATTCTTCCACGTGAATGAGTCTTGAATCCACTTGCTTACTGTTTTTTTTTTTTTTTGGGGGGGAGATTTTATGATGTGTACTTTATAGTGTCTGTTGGCTTCCTCGATTGATACTTTTGATTTTTGAATCTCTCTACTTATGCGATTGATTTTTATATTGTGTATATGAACTTCAATTCGAGCTCGGTTACTTGAATGGCCGTTAAATTAATTAGTTCAACTCTGAATTTGTCTGCAGTTTTTCTCAAGAATTGGATGAAATTTTGTGAAAGAGGATGGAATCTTACGGAGTAATGGATTTCTTTGGTTTTGTAGGTTATAATTATGCGAACTCTTTAGTGAAGAGAATGGAAACGGACTGGCTTGGTACGCTTTTGAATACGAAATTCTTCGTTTCTTGCGATCTTCATCCTAATCTCAGGAAAAATGAGAAAAATAAATTCTGCATTGATTGTAGTGTTAGCTTCTGCAAGAATTGTACAGTACATGATCTTCATCGGCAGGTTCATATCTGGAAATATGTCTATCATGAAGTTGTTCGCGTTCAGGACACGGAGAAATACTTTCGCTGTTCAGAGATTCATGTATAAAACATTTTTTCCCTTATTACAACTCCAGTAAGATATCGATTTAATAGTCTTCCATAGAAAAGATTTCTGAATTCAATCTTTGTGTTGCTGATCTTTTTGCTTTTATGTAGTTGAAATCATTGAGATTTGAGATAAGTTCTTATTTTATTCTAACACAACTTTTAATTCTTTAGCCGAATCTATCTGGTTTTCAACCACTTCTTGTAAGGATCGAATCCGAGGTGACTGTTTGTAGAGGAAATCTCAGAAGTTTGATTTTGATCTTTACCATTTTGAATGAACAAATCATATTGTTTTTGTTAATCTGAGTCCCGTCTGATTCCATTTTAGTTTTAGGAATAAAGTTCGTTTGTTATCAATTTGTTTGCTTTCTTTTCTACTTGTTGAAAATGATCAAACTGAACTATTAATAACATTCCCTTTCTCCTATGGCATTTCATCTCTATGTCTTCTAACTTGAAACCTCTTGCTTGATTCTGCAGACATATAAAGTCAATGGTGAAATATCTGTTCATCTAAACTCCCGTGGTCAATCCGTCGATGCCAAACCACCAAAAGCGAAGTCCGGTGGTTCTTGTGAAGACTGTGGTAGATATGTACAATATCCTAATCGCTTCTGTTCAATTGCTTGCAAGGTATATAAAAACATGAGCCTTATCACAACTCTGCTACTCGGTAGATTGCTTAGACTAAGCGACCATATCTTAAGCAATTTAATTACATCATGCACATATTGCTAACAATTGAACTGCTGCAAAAACATCAGGTTTCTGTGAACTCAAAGCTTAAGGACCAGAGCATAAGAACCATCGTATCTCTGAGCCCGGATTTTGGTAACTTATCGTTCAAGGAAAAAAATAGCGCTGAAACAAATGCAAGCGAATTGGAATCGACCATATCAATTGCAGAGTCCAGGGAAGAGACCAAAGCTAGCCCTTCATCTTCACAGCCAAGAAAACGCAGAAGGAAAGACACCCCTCACAGATCTCCATCCTTCTGATAAGATCCAACATTTCCATCTTCATTTTAACTTCCTTGTGGCTCTCAAATGGTATGCTTCTTAAATTTTATTTACCATGACTCTTTACATAAAATGCCTAGTAGTGAAATCATCAATATAAAAGTCTGAATTTTAGAACACAATGCATTATCACTACTCGCATGATTTCTAAAATTTCTTTCTACAGCTTTGACTAGAAACATTAGCTGTTAGAGAAAGCTGACATGAACAGACATTTTTGACCCATTCTGAAGAATTTTTAATGTCCATGTGATTGCATTTTCTGTCTGAAATGGTTAAACATAGCTATTCTTCATCACTACAATTAGCATGTGAGTATGGGTCTTATTATTGATGAGAATGTTTGTAGATGTGTTTACACGAAAGTTTGCTTTCCCACTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTCTCTTTTTGCTGTATGGCCGCCATGGAATTAGAGCTTCCTTTTGTCTTTGTTGACTAACTTGGGACTCACTTCCTTTTAGTTCATGTATTATTTAAATGTTTTATTAAATTTAATCTTTTTAGATCCAATAAATATTAAGTTTAGCCCAATATAAATACCTTTCTAAAGTTTAGGGAGGAGATGTTAGAGACTTTTTCAATAATTTTTAAGATTAAAAAAGAATAAAGTGGTACTAAACTTGAAGATAGGTAGAATAAATTTCAAAATAGTAATAAATTTTAGTTTTTGGGTTGGTGTGTCAATATTTGGTAGCTGTTAAAAG

mRNA sequence

AGATCCTAAAGATTTCTGTTTCCATTTTCACTTTAATCTTCGTTCTTCCTCTTCTTCCTTCCTCCATTTGCAGAGCTTAATCCAATTTGTCCGCCGCTTCCTCTGTGTCCTTGTACTGGTTTCAGTCTTCGTCCTGCAATCGGAAGAATCTGTTATAATTATGCGAACTCTTTAGTGAAGAGAATGGAAACGGACTGGCTTGGTACGCTTTTGAATACGAAATTCTTCGTTTCTTGCGATCTTCATCCTAATCTCAGGAAAAATGAGAAAAATAAATTCTGCATTGATTGTAGTGTTAGCTTCTGCAAGAATTGTACAGTACATGATCTTCATCGGCAGGTTCATATCTGGAAATATGTCTATCATGAAGTTGTTCGCGTTCAGGACACGGAGAAATACTTTCGCTGTTCAGAGATTCATACATATAAAGTCAATGGTGAAATATCTGTTCATCTAAACTCCCGTGGTCAATCCGTCGATGCCAAACCACCAAAAGCGAAGTCCGGTGGTTCTTGTGAAGACTGTGGTAGATATGTACAATATCCTAATCGCTTCTGTTCAATTGCTTGCAAGGTTTCTGTGAACTCAAAGCTTAAGGACCAGAGCATAAGAACCATCGTATCTCTGAGCCCGGATTTTGGTAACTTATCGTTCAAGGAAAAAAATAGCGCTGAAACAAATGCAAGCGAATTGGAATCGACCATATCAATTGCAGAGTCCAGGGAAGAGACCAAAGCTAGCCCTTCATCTTCACAGCCAAGAAAACGCAGAAGGAAAGACACCCCTCACAGATCTCCATCCTTCTGATAAGATCCAACATTTCCATCTTCATTTTAACTTCCTTGTGGCTCTCAAATGGTATGCTTCTTAAATTTTATTTACCATGACTCTTTACATAAAATGCCTAGTAGTGAAATCATCAATATAAAAGTCTGAATTTTAGAACACAATGCATTATCACTACTCGCATGATTTCTAAAATTTCTTTCTACAGCTTTGACTAGAAACATTAGCTGTTAGAGAAAGCTGACATGAACAGACATTTTTGACCCATTCTGAAGAATTTTTAATGTCCATGTGATTGCATTTTCTGTCTGAAATGGTTAAACATAGCTATTCTTCATCACTACAATTAGCATGTGAGTATGGGTCTTATTATTGATGAGAATGTTTGTAGATGTGTTTACACGAAAGTTTGCTTTCCCACTTTTTCTTTTTCTTTTTCTTTTTCTTTTTCTCTCTTTTTGCTGTATGGCCGCCATGGAATTAGAGCTTCCTTTTGTCTTTGTTGACTAACTTGGGACTCACTTCCTTTTAGTTCATGTATTATTTAAATGTTTTATTAAATTTAATCTTTTTAGATCCAATAAATATTAAGTTTAGCCCAATATAAATACCTTTCTAAAGTTTAGGGAGGAGATGTTAGAGACTTTTTCAATAATTTTTAAGATTAAAAAAGAATAAAGTGGTACTAAACTTGAAGATAGGTAGAATAAATTTCAAAATAGTAATAAATTTTAGTTTTTGGGTTGGTGTGTCAATATTTGGTAGCTGTTAAAAG

Coding sequence (CDS)

ATGGAAACGGACTGGCTTGGTACGCTTTTGAATACGAAATTCTTCGTTTCTTGCGATCTTCATCCTAATCTCAGGAAAAATGAGAAAAATAAATTCTGCATTGATTGTAGTGTTAGCTTCTGCAAGAATTGTACAGTACATGATCTTCATCGGCAGGTTCATATCTGGAAATATGTCTATCATGAAGTTGTTCGCGTTCAGGACACGGAGAAATACTTTCGCTGTTCAGAGATTCATACATATAAAGTCAATGGTGAAATATCTGTTCATCTAAACTCCCGTGGTCAATCCGTCGATGCCAAACCACCAAAAGCGAAGTCCGGTGGTTCTTGTGAAGACTGTGGTAGATATGTACAATATCCTAATCGCTTCTGTTCAATTGCTTGCAAGGTTTCTGTGAACTCAAAGCTTAAGGACCAGAGCATAAGAACCATCGTATCTCTGAGCCCGGATTTTGGTAACTTATCGTTCAAGGAAAAAAATAGCGCTGAAACAAATGCAAGCGAATTGGAATCGACCATATCAATTGCAGAGTCCAGGGAAGAGACCAAAGCTAGCCCTTCATCTTCACAGCCAAGAAAACGCAGAAGGAAAGACACCCCTCACAGATCTCCATCCTTCTGA

Protein sequence

METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVYHEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQYPNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESREETKASPSSSQPRKRRRKDTPHRSPSF

Homology

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BLAST of CmaCh04G000830 vs. ExPASy Swiss-Prot
Match: Q1G3Q4 (Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=RITF1 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 4.7e-21
Identity = 50/128 (39.06%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 5   WLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCT-VHDLHRQVHIWKYVYHEV 64
           WL  L   KFFV C  H   +KNE+N  C+DC  S C +C   H  HR + + +YVYH+V
Sbjct: 8   WLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYHDV 67

Query: 65  VRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQYPNR 124
           VR++D +K   CS +  Y +N    V +  R Q+   K     +G  C  C R +Q P  
Sbjct: 68  VRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFK----GAGNYCTSCDRSLQEPYI 127

Query: 125 FCSIACKV 132
            CS+ CKV
Sbjct: 128 HCSLGCKV 131

[Close]

BLAST of CmaCh04G000830 vs. ExPASy TrEMBL
Match: A0A6J1K8W8 (uncharacterized protein LOC111491731 OS=Cucurbita maxima OX=3661 GN=LOC111491731 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 8.3e-114
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60
           METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY
Sbjct: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60

Query: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120
           HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY
Sbjct: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120

Query: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR 180
           PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR
Sbjct: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR 180

Query: 181 EETKASPSSSQPRKRRRKDTPHRSPSF 208
           EETKASPSSSQPRKRRRKDTPHRSPSF
Sbjct: 181 EETKASPSSSQPRKRRRKDTPHRSPSF 207

[Close]

BLAST of CmaCh04G000830 vs. ExPASy TrEMBL
Match: A0A6J1FR06 (uncharacterized protein LOC111447662 OS=Cucurbita moschata OX=3662 GN=LOC111447662 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.2e-112
Identity = 205/207 (99.03%), Postives = 205/207 (99.03%), Query Frame = 0


Query: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60
           METDWLGTLLNTKFF SCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY
Sbjct: 1   METDWLGTLLNTKFFASCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60

Query: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120
           HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY
Sbjct: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120

Query: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR 180
           PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEK SAETNASELESTISIAESR
Sbjct: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKTSAETNASELESTISIAESR 180

Query: 181 EETKASPSSSQPRKRRRKDTPHRSPSF 208
           EETKASPSSSQPRKRRRKDTPHRSPSF
Sbjct: 181 EETKASPSSSQPRKRRRKDTPHRSPSF 207

[Close]

BLAST of CmaCh04G000830 vs. ExPASy TrEMBL
Match: A0A6J1D096 (uncharacterized protein LOC111015876 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111015876 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 7.6e-91
Identity = 172/206 (83.50%), Postives = 185/206 (89.81%), Query Frame = 0


Query: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60
           METDW+GTLLNTKFF SCDLHP LRKNEKNKFCIDCS+SFCKNC VHDLHRQV+IWKYVY
Sbjct: 1   METDWIGTLLNTKFFTSCDLHPTLRKNEKNKFCIDCSISFCKNCRVHDLHRQVNIWKYVY 60

Query: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120
           H+VVRVQD EK+FRCSEIHTYKVNGE+SVHLNSR QSVD K PKAKS GSCEDCGR+VQ 
Sbjct: 61  HDVVRVQDMEKFFRCSEIHTYKVNGEVSVHLNSRRQSVDTKSPKAKSRGSCEDCGRHVQD 120

Query: 121 PNRFCSIACKVSVNS-KLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAES 180
           P RFCS+ACKVSVNS K+K QSI TI+S S DFGNLS+KE+ S ETNASELESTISIAES
Sbjct: 121 PYRFCSVACKVSVNSVKVKGQSIGTIISPSLDFGNLSYKERTSPETNASELESTISIAES 180

Query: 181 REETKASPSSSQPRKRRRKDTPHRSP 206
            EE KASPSSS+PRKRRRK  PHRSP
Sbjct: 181 IEEIKASPSSSRPRKRRRKGIPHRSP 206

[Close]

BLAST of CmaCh04G000830 vs. ExPASy TrEMBL
Match: A0A0A0KL89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G023890 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.1e-81
Identity = 154/208 (74.04%), Postives = 177/208 (85.10%), Query Frame = 0


Query: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60
           ME++WLGTLLNTKF+ SCDLHPNL +N+K++FCIDCSVSFCKNCT+HDLHRQV+IWKYVY
Sbjct: 1   MESNWLGTLLNTKFYTSCDLHPNLWRNKKSRFCIDCSVSFCKNCTIHDLHRQVNIWKYVY 60

Query: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120
            EVVRVQD EKYF CSEIH YKVNG+++VH+NS GQSVD K PK KS   CE+CG+++  
Sbjct: 61  REVVRVQDMEKYFCCSEIHPYKVNGKLAVHINSCGQSVDTKSPKRKSSNPCEECGKHIHD 120

Query: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKE-KNSAETNASELESTISIAES 180
           P+RFCSIACKV VNSK+KD S+ T+VSLS D GNLSFK+ K S ETNASELESTISIAES
Sbjct: 121 PHRFCSIACKVCVNSKIKDHSVGTVVSLSQDSGNLSFKDNKRSPETNASELESTISIAES 180

Query: 181 REETKASPSSSQPRKRRRKDTPHRSPSF 208
            EETK S SS QPRKRR K  PHR+P F
Sbjct: 181 MEETKTSTSSLQPRKRRVKSIPHRAPFF 208

[Close]

BLAST of CmaCh04G000830 vs. ExPASy TrEMBL
Match: A0A6J1D0E9 (uncharacterized protein LOC111015876 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111015876 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.8e-71
Identity = 149/206 (72.33%), Postives = 159/206 (77.18%), Query Frame = 0


Query: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60
           METDW+GTLLNTKFF SCDLHP LRKNEKNKFCIDCS+SFCKNC VHDLHRQ        
Sbjct: 1   METDWIGTLLNTKFFTSCDLHPTLRKNEKNKFCIDCSISFCKNCRVHDLHRQ-------- 60

Query: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120
                              TYKVNGE+SVHLNSR QSVD K PKAKS GSCEDCGR+VQ 
Sbjct: 61  -------------------TYKVNGEVSVHLNSRRQSVDTKSPKAKSRGSCEDCGRHVQD 120

Query: 121 PNRFCSIACKVSVNS-KLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAES 180
           P RFCS+ACKVSVNS K+K QSI TI+S S DFGNLS+KE+ S ETNASELESTISIAES
Sbjct: 121 PYRFCSVACKVSVNSVKVKGQSIGTIISPSLDFGNLSYKERTSPETNASELESTISIAES 179

Query: 181 REETKASPSSSQPRKRRRKDTPHRSP 206
            EE KASPSSS+PRKRRRK  PHRSP
Sbjct: 181 IEEIKASPSSSRPRKRRRKGIPHRSP 179

[Close]

BLAST of CmaCh04G000830 vs. NCBI nr
Match: XP_022996504.1 (uncharacterized protein LOC111491731 [Cucurbita maxima])

HSP 1 Score: 419.5 bits (1077), Expect = 1.7e-113
Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0


Query: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60
           METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY
Sbjct: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60

Query: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120
           HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY
Sbjct: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120

Query: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR 180
           PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR
Sbjct: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR 180

Query: 181 EETKASPSSSQPRKRRRKDTPHRSPSF 208
           EETKASPSSSQPRKRRRKDTPHRSPSF
Sbjct: 181 EETKASPSSSQPRKRRRKDTPHRSPSF 207

[Close]

BLAST of CmaCh04G000830 vs. NCBI nr
Match: KAG6599925.1 (hypothetical protein SDJN03_05158, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 415.6 bits (1067), Expect = 2.5e-112
Identity = 205/207 (99.03%), Postives = 205/207 (99.03%), Query Frame = 0


Query: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60
           METDWLGTLLNTKFF SCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY
Sbjct: 44  METDWLGTLLNTKFFASCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 103

Query: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120
           HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY
Sbjct: 104 HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 163

Query: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR 180
           PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEK SAETNASELESTISIAESR
Sbjct: 164 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKTSAETNASELESTISIAESR 223

Query: 181 EETKASPSSSQPRKRRRKDTPHRSPSF 208
           EETKASPSSSQPRKRRRKDTPHRSPSF
Sbjct: 224 EETKASPSSSQPRKRRRKDTPHRSPSF 250

[Close]

BLAST of CmaCh04G000830 vs. NCBI nr
Match: KAG7030608.1 (hypothetical protein SDJN02_04645 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415.6 bits (1067), Expect = 2.5e-112
Identity = 205/207 (99.03%), Postives = 205/207 (99.03%), Query Frame = 0


Query: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60
           METDWLGTLLNTKFF SCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY
Sbjct: 52  METDWLGTLLNTKFFASCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 111

Query: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120
           HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY
Sbjct: 112 HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 171

Query: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR 180
           PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEK SAETNASELESTISIAESR
Sbjct: 172 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKTSAETNASELESTISIAESR 231

Query: 181 EETKASPSSSQPRKRRRKDTPHRSPSF 208
           EETKASPSSSQPRKRRRKDTPHRSPSF
Sbjct: 232 EETKASPSSSQPRKRRRKDTPHRSPSF 258

[Close]

BLAST of CmaCh04G000830 vs. NCBI nr
Match: XP_022942707.1 (uncharacterized protein LOC111447662 [Cucurbita moschata])

HSP 1 Score: 415.6 bits (1067), Expect = 2.5e-112
Identity = 205/207 (99.03%), Postives = 205/207 (99.03%), Query Frame = 0


Query: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60
           METDWLGTLLNTKFF SCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY
Sbjct: 1   METDWLGTLLNTKFFASCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60

Query: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120
           HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY
Sbjct: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120

Query: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR 180
           PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEK SAETNASELESTISIAESR
Sbjct: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKTSAETNASELESTISIAESR 180

Query: 181 EETKASPSSSQPRKRRRKDTPHRSPSF 208
           EETKASPSSSQPRKRRRKDTPHRSPSF
Sbjct: 181 EETKASPSSSQPRKRRRKDTPHRSPSF 207

[Close]

BLAST of CmaCh04G000830 vs. NCBI nr
Match: XP_023548890.1 (uncharacterized protein LOC111807405 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109
Identity = 203/208 (97.60%), Postives = 203/208 (97.60%), Query Frame = 0


Query: 1   METDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60
           METDWLGTLLNTKFF SCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY
Sbjct: 1   METDWLGTLLNTKFFGSCDLHPNLRKNEKNKFCIDCSVSFCKNCTVHDLHRQVHIWKYVY 60

Query: 61  HEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQY 120
           HEVVRVQD EKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPK KSGGSCEDCGRYVQY
Sbjct: 61  HEVVRVQDAEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKTKSGGSCEDCGRYVQY 120

Query: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR 180
           PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEK SAETNASELESTISIAESR
Sbjct: 121 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKTSAETNASELESTISIAESR 180

Query: 181 EETKASP-SSSQPRKRRRKDTPHRSPSF 208
           EETKASP SSSQPRKRRRKDTPHRSPSF
Sbjct: 181 EETKASPSSSSQPRKRRRKDTPHRSPSF 208

[Close]

BLAST of CmaCh04G000830 vs. TAIR 10
Match: AT2G01818.1 (PLATZ transcription factor family protein )

HSP 1 Score: 151.8 bits (382), Expect = 6.2e-37
Identity = 99/219 (45.21%), Postives = 137/219 (62.56%), Query Frame = 0


Query: 2   ETDWLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNC--TV---HDLHRQVHIW 61
           E  W+ TLLN++FF  C  H  LRKNEKN FCIDC+V  C++C  TV   H LHR++ I 
Sbjct: 10  EEVWIETLLNSEFFGICMNHKYLRKNEKNVFCIDCNVEICRHCCNTVTDSHFLHRRLQIC 69

Query: 62  KYVYHEVVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKP-PKAKSGGSCEDCG 121
           KYVY +V+R+ + + YF CSEI TYK+NGE ++HLNSR Q+ DA+P  KAK+G SC  C 
Sbjct: 70  KYVYQDVIRLLEIQNYFDCSEIQTYKINGEKAIHLNSRPQAKDARPSTKAKNGASCVTCK 129

Query: 122 RYVQ-YPNRFCSIACKVSVNSKLKDQSIRTIVSLSPDF-GNLSFKEKNSAETNASELES- 181
           RY+Q +PN FCSI+CK+S  SK      +     SP    ++  KE ++ E +  E +S 
Sbjct: 130 RYIQDHPNLFCSISCKISTPSK------KHKFCFSPKLEQSVLEKEHSTQEGSLEEKKSC 189

Query: 182 TISIAESREETKA--SPSSSQPRKR--RRKDTPHRSPSF 208
           T S+ +  E+++   S  S +P  R  +RK    RSP +
Sbjct: 190 TSSLTDVSEDSEVLLSDFSFRPLLRILKRKGISRRSPFY 222

[Close]

BLAST of CmaCh04G000830 vs. TAIR 10
Match: AT1G31040.1 (PLATZ transcription factor family protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.5e-22
Identity = 55/129 (42.64%), Postives = 73/129 (56.59%), Query Frame = 0


Query: 5   WLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNC-TVHDLHRQVHIWKYVYHEV 64
           WL  L+   FF SC +H   RK+EKN FC+ C +S C +C   H  H  + + +YVYH+V
Sbjct: 21  WLEGLMAETFFSSCGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVYHDV 80

Query: 65  VRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAK-SGGSCEDCGRYVQYPN 124
           VR+ D EK   CS +  Y +NG   + LN R QS      +AK S   C  C R +Q P 
Sbjct: 81  VRLSDLEKLIDCSYVQPYTINGAKVIFLNQRQQS------RAKVSSNVCFTCDRILQEPF 140

Query: 125 RFCSIACKV 132
            FCS++CKV
Sbjct: 141 HFCSLSCKV 143

[Close]

BLAST of CmaCh04G000830 vs. TAIR 10
Match: AT2G12646.1 (PLATZ transcription factor family protein )

HSP 1 Score: 102.8 bits (255), Expect = 3.3e-22
Identity = 50/128 (39.06%), Postives = 68/128 (53.12%), Query Frame = 0


Query: 5   WLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNCT-VHDLHRQVHIWKYVYHEV 64
           WL  L   KFFV C  H   +KNE+N  C+DC  S C +C   H  HR + + +YVYH+V
Sbjct: 8   WLDALYAEKFFVGCPYHETAKKNERNVCCLDCCTSLCPHCVPSHRFHRLLQVRRYVYHDV 67

Query: 65  VRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQYPNR 124
           VR++D +K   CS +  Y +N    V +  R Q+   K     +G  C  C R +Q P  
Sbjct: 68  VRLEDLQKLIDCSNVQAYTINSAKVVFIKKRPQNRQFK----GAGNYCTSCDRSLQEPYI 127

Query: 125 FCSIACKV 132
            CS+ CKV
Sbjct: 128 HCSLGCKV 131

[Close]

BLAST of CmaCh04G000830 vs. TAIR 10
Match: AT3G60670.1 (PLATZ transcription factor family protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-21
Identity = 54/129 (41.86%), Postives = 72/129 (55.81%), Query Frame = 0


Query: 5   WLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVSFCKNC-TVHDLHRQVHIWKYVYHEV 64
           WL  LL  KFF +C  H + +KNEKN  CIDC ++ C +C + H  HR + I +YVY +V
Sbjct: 9   WLEVLLKDKFFNACLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYRDV 68

Query: 65  VRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSGGSCEDCGRYVQYPNR 124
           +RV+D  K   CS I  Y  N    V +N R QS   +     SG  C  C R +Q P  
Sbjct: 69  LRVEDGSKLMDCSLIQPYTTNSSKVVFINERPQSRQFR----GSGNICITCDRSLQSPYL 128

Query: 125 FCSIACKVS 133
           FC ++CK+S
Sbjct: 129 FCCLSCKIS 133

[Close]

BLAST of CmaCh04G000830 vs. TAIR 10
Match: AT1G32700.1 (PLATZ transcription factor family protein )

HSP 1 Score: 91.7 bits (226), Expect = 7.6e-19
Identity = 68/207 (32.85%), Postives = 100/207 (48.31%), Query Frame = 0


Query: 5   WLGTLLNTKFFVSCDLHPNLRKNEKNKFCIDCSVS-FCKNC-TVHDLHRQVHIWKYVYHE 64
           WL  LL  KFFV C LH +  K+E N +C+DC+    C  C + H  H  + I +  YH+
Sbjct: 14  WLKPLLREKFFVQCKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYHD 73

Query: 65  VVRVQDTEKYFRCSEIHTYKVNGEISVHLNSRGQSVDAKPPKAKSG--GSCEDCGRYVQY 124
           V+RV + +K+   + + TY +N    V LN R Q      P+   G   +CE C R +  
Sbjct: 74  VIRVSEIQKFLDITGVQTYVINSAKVVFLNERPQ------PRPGKGVINTCEVCYRSLVD 133

Query: 125 PNRFCSIACKVSVNSKLKDQSIRTIVSLSPDFGNLSFKEKNSAETNASELESTISIAESR 184
             RFCS+ CK+S  SK K +             NLS  + + + T+   L+    I  + 
Sbjct: 134 SFRFCSLGCKISGISKKKRKEWT---------NNLSDSDDSYSSTSIGRLKKNDDIMNNS 193

Query: 185 EETKASPSSSQPRK--RRRKDTPHRSP 206
                 P S+  R+  +RRK  PHR+P
Sbjct: 194 FTPSTPPLSAVNRRIAKRRKGIPHRAP 205

The following BLAST results are available for this feature:

BLAST of CmaCh04G000830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G3Q4	4.7e-21	39.06	Protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CmaCh04G000830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K8W8	8.3e-114	100.00	uncharacterized protein LOC111491731 OS=Cucurbita maxima OX=3661 GN=LOC111491731...	[more]
A0A6J1FR06	1.2e-112	99.03	uncharacterized protein LOC111447662 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]
A0A6J1D096	7.6e-91	83.50	uncharacterized protein LOC111015876 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0KL89	1.1e-81	74.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G023890 PE=4 SV=1	[more]
A0A6J1D0E9	1.8e-71	72.33	uncharacterized protein LOC111015876 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CmaCh04G000830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022996504.1	1.7e-113	100.00	uncharacterized protein LOC111491731 [Cucurbita maxima]	[more]
KAG6599925.1	2.5e-112	99.03	hypothetical protein SDJN03_05158, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7030608.1	2.5e-112	99.03	hypothetical protein SDJN02_04645 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022942707.1	2.5e-112	99.03	uncharacterized protein LOC111447662 [Cucurbita moschata]	[more]
XP_023548890.1	1.5e-109	97.60	uncharacterized protein LOC111807405 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh04G000830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01818.1	6.2e-37	45.21	PLATZ transcription factor family protein	[more]
AT1G31040.1	2.5e-22	42.64	PLATZ transcription factor family protein	[more]
AT2G12646.1	3.3e-22	39.06	PLATZ transcription factor family protein	[more]
AT3G60670.1	1.6e-21	41.86	PLATZ transcription factor family protein	[more]
AT1G32700.1	7.6e-19	32.85	PLATZ transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 160..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..207
None	No IPR available	PANTHER	PTHR31065:SF41	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 3..206
None	No IPR available	PANTHER	PTHR31065	PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 3..206
IPR006734	PLATZ transcription factor	PFAM	PF04640	PLATZ	coord: 57..131 e-value: 8.1E-20 score: 71.3
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 13..66 score: 8.545968

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G000830.1	CmaCh04G000830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding