CmaCh03G008970 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCACACGCATGTCCGATTCTTCTTTGATTTCTTTTATATACCATTTCTTTCATTACTTTCTCTTTATCCTTTAATTTCCAACCCTTTCCTTACTTTCAAATCCACTAATGCCTTCTAAATTCTTCTCTTTCCGCTGCCTTATCTTTCTCCTCCTCCTCCTCCTCTGCAACAGGCTACCACCAGCTCATGCTGCCCGCCCTGCTCCCGTCTTTGCATCACTGCCCACTCAGGTTTGTTATCGTAATCTATTCGCTTCAGTGTTATTGTTCTACCAAGAGTAAGAACAAAGTGTTGGGTCATATTTTTCTCCAACTAAATTGTATTCATTTGTACATCTTGTTGATATTGAGATGGTTGTTTATTTGGGTTTTGTAGGGATTGGATGAGAACCAAACTGATAGCGAGAATATGGATGAGAAGTGCAGTGGAGTAAGCGAAGAAGAGTGTTTGATCAGACGAACTCTAGCTGCTCACTTAGATTACGTCTATACTCAAAAGCATACCCCGTAATTTCAACACCTTTTCATTCTAATTTCTTCCTTTTATGTATCTACAAACTTCCATTCATGCCACTTATATATCTATTGAATTAGCTTCACTGGGTCTCAATGAAAGAAAAAAACAGAGCATTTTTAGATGATCCCAGACAGGACAAATTAATGAAATTGATTATGATTCTGAACATGAGCATCTGACTTTTCTGCACACTTCACAACAAATTGAATCGGTGGGGTATTACAAAT TCACACGCATGTCCGATTCTTCTTTGATTTCTTTTATATACCATTTCTTTCATTACTTTCTCTTTATCCTTTAATTTCCAACCCTTTCCTTACTTTCAAATCCACTAATGCCTTCTAAATTCTTCTCTTTCCGCTGCCTTATCTTTCTCCTCCTCCTCCTCCTCTGCAACAGGCTACCACCAGCTCATGCTGCCCGCCCTGCTCCCGTCTTTGCATCACTGCCCACTCAGGGATTGGATGAGAACCAAACTGATAGCGAGAATATGGATGAGAAGTGCAGTGGAGTAAGCGAAGAAGAGTGTTTGATCAGACGAACTCTAGCTGCTCACTTAGATTACGTCTATACTCAAAAGCATACCCCGTAATTTCAACACCTTTTCATTCTAATTTCTTCCTTTTATGTATCTACAAACTTCCATTCATGCCACTTATATATCTATTGAATTAGCTTCACTGGGTCTCAATGAAAGAAAAAAACAGAGCATTTTTAGATGATCCCAGACAGGACAAATTAATGAAATTGATTATGATTCTGAACATGAGCATCTGACTTTTCTGCACACTTCACAACAAATTGAATCGGTGGGGTATTACAAAT ATGCCTTCTAAATTCTTCTCTTTCCGCTGCCTTATCTTTCTCCTCCTCCTCCTCCTCTGCAACAGGCTACCACCAGCTCATGCTGCCCGCCCTGCTCCCGTCTTTGCATCACTGCCCACTCAGGGATTGGATGAGAACCAAACTGATAGCGAGAATATGGATGAGAAGTGCAGTGGAGTAAGCGAAGAAGAGTGTTTGATCAGACGAACTCTAGCTGCTCACTTAGATTACGTCTATACTCAAAAGCATACCCCGTAA MPSKFFSFRCLIFLLLLLLCNRLPPAHAARPAPVFASLPTQGLDENQTDSENMDEKCSGVSEEECLIRRTLAAHLDYVYTQKHTP Homology
BLAST of CmaCh03G008970 vs. ExPASy Swiss-Prot
Match: Q9M2Y0 (Phytosulfokines 3 OS=Arabidopsis thaliana OX=3702 GN=PSK3 PE=2 SV=2) HSP 1 Score: 62.0 bits (149), Expect = 3.7e-09 Identity = 31/75 (41.33%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of CmaCh03G008970 vs. ExPASy Swiss-Prot
Match: Q9FS10 (Phytosulfokines OS=Asparagus officinalis OX=4686 GN=PSK PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.4e-08 Identity = 36/75 (48.00%), Postives = 41/75 (54.67%), Query Frame = 0
BLAST of CmaCh03G008970 vs. ExPASy Swiss-Prot
Match: Q9FEB4 (Phytosulfokines 5 OS=Arabidopsis thaliana OX=3702 GN=PSK5 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 3.5e-07 Identity = 39/85 (45.88%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of CmaCh03G008970 vs. ExPASy Swiss-Prot
Match: O81003 (Phytosulfokines 2 OS=Arabidopsis thaliana OX=3702 GN=PSK2 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.5e-05 Identity = 30/79 (37.97%), Postives = 42/79 (53.16%), Query Frame = 0
BLAST of CmaCh03G008970 vs. ExPASy Swiss-Prot
Match: Q9SZG4 (Putative phytosulfokines 4 OS=Arabidopsis thaliana OX=3702 GN=PSK4 PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 4.3e-05 Identity = 31/79 (39.24%), Postives = 41/79 (51.90%), Query Frame = 0
BLAST of CmaCh03G008970 vs. ExPASy TrEMBL
Match: A0A6J1ILJ9 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111478122 PE=3 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 8.6e-41 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CmaCh03G008970 vs. ExPASy TrEMBL
Match: A0A6J1GEZ6 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111453331 PE=3 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.4e-35 Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 0
BLAST of CmaCh03G008970 vs. ExPASy TrEMBL
Match: A0A6J1KP44 (Phytosulfokine-beta OS=Cucurbita maxima OX=3661 GN=LOC111497011 PE=3 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 9.9e-21 Identity = 58/91 (63.74%), Postives = 67/91 (73.63%), Query Frame = 0
BLAST of CmaCh03G008970 vs. ExPASy TrEMBL
Match: A0A6J1HJ90 (Phytosulfokine-beta OS=Cucurbita moschata OX=3662 GN=LOC111463441 PE=3 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19 Identity = 56/91 (61.54%), Postives = 66/91 (72.53%), Query Frame = 0
BLAST of CmaCh03G008970 vs. ExPASy TrEMBL
Match: A0A5A7T4W2 (Phytosulfokine-beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G003840 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 4.6e-18 Identity = 55/88 (62.50%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of CmaCh03G008970 vs. NCBI nr
Match: XP_022978001.1 (phytosulfokines-like [Cucurbita maxima]) HSP 1 Score: 175.6 bits (444), Expect = 1.8e-40 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CmaCh03G008970 vs. NCBI nr
Match: XP_023545097.1 (phytosulfokines-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 161.4 bits (407), Expect = 3.5e-36 Identity = 80/88 (90.91%), Postives = 82/88 (93.18%), Query Frame = 0
BLAST of CmaCh03G008970 vs. NCBI nr
Match: KAG6604111.1 (Phytosulfokine, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 159.5 bits (402), Expect = 1.3e-35 Identity = 80/87 (91.95%), Postives = 81/87 (93.10%), Query Frame = 0
BLAST of CmaCh03G008970 vs. NCBI nr
Match: XP_022950154.1 (phytosulfokines-like [Cucurbita moschata] >KAG7034274.1 Phytosulfokine, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 158.3 bits (399), Expect = 2.9e-35 Identity = 79/87 (90.80%), Postives = 81/87 (93.10%), Query Frame = 0
BLAST of CmaCh03G008970 vs. NCBI nr
Match: KAG6594959.1 (Phytosulfokines 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 112.1 bits (279), Expect = 2.4e-21 Identity = 59/91 (64.84%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of CmaCh03G008970 vs. TAIR 10
Match: AT3G49780.1 (phytosulfokine 4 precursor ) HSP 1 Score: 62.0 bits (149), Expect = 2.7e-10 Identity = 31/75 (41.33%), Postives = 48/75 (64.00%), Query Frame = 0
BLAST of CmaCh03G008970 vs. TAIR 10
Match: AT5G65870.1 (phytosulfokine 5 precursor ) HSP 1 Score: 55.5 bits (132), Expect = 2.5e-08 Identity = 39/85 (45.88%), Postives = 46/85 (54.12%), Query Frame = 0
BLAST of CmaCh03G008970 vs. TAIR 10
Match: AT2G22860.1 (phytosulfokine 2 precursor ) HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06 Identity = 30/79 (37.97%), Postives = 42/79 (53.16%), Query Frame = 0
BLAST of CmaCh03G008970 vs. TAIR 10
Match: AT4G37720.1 (phytosulfokine 6 precursor ) HSP 1 Score: 48.5 bits (114), Expect = 3.0e-06 Identity = 31/79 (39.24%), Postives = 41/79 (51.90%), Query Frame = 0
BLAST of CmaCh03G008970 vs. TAIR 10
Match: AT2G22942.1 (growth factors ) HSP 1 Score: 40.8 bits (94), Expect = 6.4e-04 Identity = 18/35 (51.43%), Postives = 23/35 (65.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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