CmaCh03G008420 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAAAGAGAGATTCCAGATCAGGAAGATCGATAACGCTACTGCGAGACAAGTCACCTTCTCCAAGCGCCGGAGGGGACTGTTTAAGAAAGCAAAAGAGCTATCCGTTCTATGCGATGCTGATGTCGCCCTCATTGTCTTCTCCGCTACCGGAAAGCTGTTTGAGTTCTCCAGCTCAAGGTTTTTCTCTGCTTCTCACTCACTCCTCTTTTTTTGGTAGAAACCAAAACTTTAATCGGTCTATCACGATTTCTGAGTTCTTCTGCGTTTTCTGATACTTCTTTAATTCCATTTACAAAGGTCACTTTGTTACTAAAAATGACGAGAACCATGACAGAAATAAAAAAACAAACTGCAGAAAACATGTGTATTTTGCTTTCAACGATCTTACGGAAAACGATTCGAACATAAGAGAAAACAATCACTAATTCGATAATGGATATAAGAGGAAATTTTTTGAAAAGTAGCGCCTTATAAAATTTGTCATATGCCTCGAGCTTCGCCCTTTCATCAGCAACGAGGTTTATGGTAGCAGCGATGACTGAAATTTTGGTTCACTCAATTAAAACTTACTGCAGTTATTGTATCGAGGTTATGCTTAACTTTAGCTGTTTATGTTTGTCCATATATTTCTTTACCTACATCAGAGTAACAGACATGTGTTCATTATCATTAATTTCTTCTTGTTTAGTCATCTGCTTCACTGACTGCTATCTGCATTTGACTTTCTGAAGCATGAAGGGAATCATAGAAAGACATAATTTGCACTCTAAGAACCTTCAGAAATTGGAACAACCATCCCTTGAACTACAGGTTTGGCGTTTCTTTCCAGATATTTCCTTTAAAAAATGGTCATCATTTTTTTTTTTTTTTTTCCAACGGTTTTCAAAGGATAAAAATAATATTATTATGGAAGCCGAAAAACATCGATCATAATTTGTCATTTTTTTAATATGAGAAACTGCTTAATCTTGTCATTTTAAAACTGAAGCGACTTTATTTGTTTTAAGAACACAAATTATTATGGAAACTTATTAAAGCAAAAAACCCTCCCTTAAAAAACAGTTATTTTTACACTGATTTTTATTCTAAAAATAGAAATCCATTTTAAAAGTAGTTTCTCAACAATCACCGTTGAAAACCACTTTTCTCATCCTGAAGTCTACTTTATATCCTGTTAAAACAGTAGCTCCAGATTTTGCAGTGAAATGGCATTTACTTGATGTCTTAATAATTTTTTTTTAAGAACTCAACTAATTTTGATATAATTTAATATAGTTCATTCTATTTCTTTAAATTTGAAATTACGTTCGAATCTCTAAAATATATTTTGAAGATTCCAGAAAGCATATGCTCAGAAGAAGGGTAAGAAGCTTATGTTTTGCTATATTAGTATGTTGAGGACGACTTGGATTCTTTCAACTCGGTAGTGGTTCCCATTCATTAGTTTGCTGAAACATTGCTTACTACTGTCAATGATTTCAGCTGGTTGAAAACAGCAATTACACCCGACTAAACAAGGAAATTGCTGAGAAAACTCAGCAGCTAAGGTATTTACACGAGAAGTTTTGTTTTTGTTTAATTTTTAAATTTTTTTTGAATGAAGATAACTTGAACTTTTGACTTTACGAAGGGTATTTGTTTGAGTTGGAGTCTGCAGTCTTTAAACCACAAAAATATATGGTTTTTTAATCACATTAATGGTGTAATTAATCCGTCAATTTGTTACGTTTTTTTTTTCTTTAAAAATATCTACAGGTTGGGGACTTCTTTTATGGTTGGATGAGGCTATCTTTACGGGTGTTGCTTAATTAATTAAATAGTTGGATTTGGATAGTTTGTTTGATAAATTTGCCAAAATTTCCCATACTCGATTTTGTTGTTAGATTTGAGTATTTTCGTGATTAGGTTCGAGTCTTCTCATAATTAACCTTTGCTGTGTTTTTATGATTATGATTGGACATTTCTTTTGTCCACCATGTTCGGTGTTTAGATATGAGTATTTTCTTGATTATATTTAGTCGTTTTTTATATGATTTTAGTGTGAGAAGGTATTCACTATAACACAAGTTCAAGGATTTAAATGAATGAAATTAAAATCAACTCCCACCTGAAATCTCATCACATGTTAGGAAATTCAGATTATAATGGTTTCTTCAGACTAATTTCTCTCACACACAGTTAAATTTGTTGACAATTTAGGCAGATGAGGGGAGAAGAGCTCCAAACATTGAATATAGAGGAACTCCAGCAGCTAGAGAAGTCACTGGAGTGTGGATTGAGCCGTGTGATGGAGAAAAAGGTATTTTCCATTCCACTGTCCATAAGAAAATCCCCTTTTCTTCTCCTCATATACAGTTTCGTTTTGATGTCCTAGGGCGAACGAATCATGACAGAAATATCTGATCTTCAAAGAAAGGTTAAGTACAGTTTCGTAGTGCAAATCAAAATGCATTAATTTCTAGTATATTACTCGGAATATGAATGAATGTGCTATTTAATTACAATTATCAAACGAGGTGAAGGTAAATTCAAACTTTTATGTGCATGCAGTCGGCTGAGTTGATGGAAGAGAATAGGCGACTGAAACAAGTAGGAAGAATAACCCTTTCCGCAGCACTTTAATATAAAATGTGTCCTTTAAAACCCTATGTAACTTATAGTCGTGGTGGTTTGCAGGCGCAAAAAATGAATTGCGTGAGGAACCTTGGCGTTGAGCCGGAGAATTTGGTCGTGGAAGATGGCCAGTCGTCGAACTCCGTCACTGAAGCTTGTGTCTCCAACTCCAATGGCCCGCCTCAAGATCTGGATAGCTCAGACACATCTCTGAAACTAGGGTAACCTCACTGCTTGAAAGTTTATTGCATCTATTTTCTAGTAATGTTCATTTAGACTGGTCAAGTTTTATATGATCGAGTGGACCCAATGGTTGCAGGCTGCCGTATTCCGGGTGACGGCGACGGTAATGGCGATCGGGAAGATGAACACGTACTGCAGCTAG ATGGCGAAAGAGAGATTCCAGATCAGGAAGATCGATAACGCTACTGCGAGACAAGTCACCTTCTCCAAGCGCCGGAGGGGACTGTTTAAGAAAGCAAAAGAGCTATCCGTTCTATGCGATGCTGATGTCGCCCTCATTGTCTTCTCCGCTACCGGAAAGCTGTTTGAGTTCTCCAGCTCAAGCATGAAGGGAATCATAGAAAGACATAATTTGCACTCTAAGAACCTTCAGAAATTGGAACAACCATCCCTTGAACTACAGCTGGTTGAAAACAGCAATTACACCCGACTAAACAAGGAAATTGCTGAGAAAACTCAGCAGCTAAGGCAGATGAGGGGAGAAGAGCTCCAAACATTGAATATAGAGGAACTCCAGCAGCTAGAGAAGTCACTGGAGTGTGGATTGAGCCGTGTGATGGAGAAAAAGGGCGAACGAATCATGACAGAAATATCTGATCTTCAAAGAAAGTCGGCTGAGTTGATGGAAGAGAATAGGCGACTGAAACAAGCGCAAAAAATGAATTGCGTGAGGAACCTTGGCGTTGAGCCGGAGAATTTGGTCGTGGAAGATGGCCAGTCGTCGAACTCCGTCACTGAAGCTTGTGTCTCCAACTCCAATGGCCCGCCTCAAGATCTGGATAGCTCAGACACATCTCTGAAACTAGGACTGGTCAAGTTTTATATGATCGAGTGGACCCAATGGTTGCAGGCTGCCGTATTCCGGGTGACGGCGACGGTAATGGCGATCGGGAAGATGAACACGTACTGCAGCTAG ATGGCGAAAGAGAGATTCCAGATCAGGAAGATCGATAACGCTACTGCGAGACAAGTCACCTTCTCCAAGCGCCGGAGGGGACTGTTTAAGAAAGCAAAAGAGCTATCCGTTCTATGCGATGCTGATGTCGCCCTCATTGTCTTCTCCGCTACCGGAAAGCTGTTTGAGTTCTCCAGCTCAAGCATGAAGGGAATCATAGAAAGACATAATTTGCACTCTAAGAACCTTCAGAAATTGGAACAACCATCCCTTGAACTACAGCTGGTTGAAAACAGCAATTACACCCGACTAAACAAGGAAATTGCTGAGAAAACTCAGCAGCTAAGGCAGATGAGGGGAGAAGAGCTCCAAACATTGAATATAGAGGAACTCCAGCAGCTAGAGAAGTCACTGGAGTGTGGATTGAGCCGTGTGATGGAGAAAAAGGGCGAACGAATCATGACAGAAATATCTGATCTTCAAAGAAAGTCGGCTGAGTTGATGGAAGAGAATAGGCGACTGAAACAAGCGCAAAAAATGAATTGCGTGAGGAACCTTGGCGTTGAGCCGGAGAATTTGGTCGTGGAAGATGGCCAGTCGTCGAACTCCGTCACTGAAGCTTGTGTCTCCAACTCCAATGGCCCGCCTCAAGATCTGGATAGCTCAGACACATCTCTGAAACTAGGACTGGTCAAGTTTTATATGATCGAGTGGACCCAATGGTTGCAGGCTGCCGTATTCCGGGTGACGGCGACGGTAATGGCGATCGGGAAGATGAACACGTACTGCAGCTAG MAKERFQIRKIDNATARQVTFSKRRRGLFKKAKELSVLCDADVALIVFSATGKLFEFSSSSMKGIIERHNLHSKNLQKLEQPSLELQLVENSNYTRLNKEIAEKTQQLRQMRGEELQTLNIEELQQLEKSLECGLSRVMEKKGERIMTEISDLQRKSAELMEENRRLKQAQKMNCVRNLGVEPENLVVEDGQSSNSVTEACVSNSNGPPQDLDSSDTSLKLGLVKFYMIEWTQWLQAAVFRVTATVMAIGKMNTYCS Homology
BLAST of CmaCh03G008420 vs. ExPASy Swiss-Prot
Match: Q9FUY6 (MADS-box protein JOINTLESS OS=Solanum lycopersicum OX=4081 GN=J PE=1 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 5.9e-74 Identity = 163/239 (68.20%), Postives = 193/239 (80.75%), Query Frame = 0
BLAST of CmaCh03G008420 vs. ExPASy Swiss-Prot
Match: Q9FVC1 (MADS-box protein SVP OS=Arabidopsis thaliana OX=3702 GN=SVP PE=1 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 7.2e-72 Identity = 157/238 (65.97%), Postives = 191/238 (80.25%), Query Frame = 0
BLAST of CmaCh03G008420 vs. ExPASy Swiss-Prot
Match: Q9XJ66 (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS22 PE=2 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 5.0e-57 Identity = 134/224 (59.82%), Postives = 171/224 (76.34%), Query Frame = 0
BLAST of CmaCh03G008420 vs. ExPASy Swiss-Prot
Match: Q5K4R0 (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS47 PE=1 SV=3) HSP 1 Score: 216.5 bits (550), Expect = 3.6e-55 Identity = 128/228 (56.14%), Postives = 169/228 (74.12%), Query Frame = 0
BLAST of CmaCh03G008420 vs. ExPASy Swiss-Prot
Match: O82794 (MADS-box protein AGL24 OS=Arabidopsis thaliana OX=3702 GN=AGL24 PE=1 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 3.0e-54 Identity = 126/224 (56.25%), Postives = 170/224 (75.89%), Query Frame = 0
BLAST of CmaCh03G008420 vs. ExPASy TrEMBL
Match: A0A6J1IM49 (MADS-box protein SVP-like OS=Cucurbita maxima OX=3661 GN=LOC111478667 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 7.4e-112 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of CmaCh03G008420 vs. ExPASy TrEMBL
Match: A0A6J1GF16 (MADS-box protein SVP-like OS=Cucurbita moschata OX=3662 GN=LOC111453602 PE=4 SV=1) HSP 1 Score: 409.5 bits (1051), Expect = 1.1e-110 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of CmaCh03G008420 vs. ExPASy TrEMBL
Match: A0A1S3B1C2 (MADS-box protein SVP-like OS=Cucumis melo OX=3656 GN=LOC103484931 PE=4 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 3.4e-101 Identity = 207/224 (92.41%), Postives = 216/224 (96.43%), Query Frame = 0
BLAST of CmaCh03G008420 vs. ExPASy TrEMBL
Match: A0A6J1HEK8 (MADS-box protein JOINTLESS-like OS=Cucurbita moschata OX=3662 GN=LOC111463267 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.6e-98 Identity = 202/224 (90.18%), Postives = 214/224 (95.54%), Query Frame = 0
BLAST of CmaCh03G008420 vs. ExPASy TrEMBL
Match: A0A6J1BWE4 (MADS-box protein JOINTLESS-like OS=Momordica charantia OX=3673 GN=LOC111005943 PE=4 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 2.1e-98 Identity = 203/225 (90.22%), Postives = 214/225 (95.11%), Query Frame = 0
BLAST of CmaCh03G008420 vs. NCBI nr
Match: XP_022978822.1 (MADS-box protein SVP-like [Cucurbita maxima] >XP_022978823.1 MADS-box protein SVP-like [Cucurbita maxima] >XP_022978824.1 MADS-box protein SVP-like [Cucurbita maxima]) HSP 1 Score: 413.3 bits (1061), Expect = 1.5e-111 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
BLAST of CmaCh03G008420 vs. NCBI nr
Match: XP_023544268.1 (MADS-box protein SVP-like [Cucurbita pepo subsp. pepo] >XP_023544269.1 MADS-box protein SVP-like [Cucurbita pepo subsp. pepo] >XP_023544270.1 MADS-box protein SVP-like [Cucurbita pepo subsp. pepo] >XP_023544271.1 MADS-box protein SVP-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 411.0 bits (1055), Expect = 7.6e-111 Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of CmaCh03G008420 vs. NCBI nr
Match: KAG6604063.1 (O-fucosyltransferase 39, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 409.5 bits (1051), Expect = 2.2e-110 Identity = 221/223 (99.10%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of CmaCh03G008420 vs. NCBI nr
Match: XP_022950516.1 (MADS-box protein SVP-like [Cucurbita moschata] >XP_022950517.1 MADS-box protein SVP-like [Cucurbita moschata] >XP_022950519.1 MADS-box protein SVP-like [Cucurbita moschata]) HSP 1 Score: 409.5 bits (1051), Expect = 2.2e-110 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of CmaCh03G008420 vs. NCBI nr
Match: XP_008440538.1 (PREDICTED: MADS-box protein SVP-like [Cucumis melo] >XP_008440540.1 PREDICTED: MADS-box protein SVP-like [Cucumis melo]) HSP 1 Score: 377.9 bits (969), Expect = 7.1e-101 Identity = 207/224 (92.41%), Postives = 216/224 (96.43%), Query Frame = 0
BLAST of CmaCh03G008420 vs. TAIR 10
Match: AT2G22540.1 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 271.9 bits (694), Expect = 5.1e-73 Identity = 157/238 (65.97%), Postives = 191/238 (80.25%), Query Frame = 0
BLAST of CmaCh03G008420 vs. TAIR 10
Match: AT2G22540.2 (K-box region and MADS-box transcription factor family protein ) HSP 1 Score: 258.5 bits (659), Expect = 5.9e-69 Identity = 152/238 (63.87%), Postives = 187/238 (78.57%), Query Frame = 0
BLAST of CmaCh03G008420 vs. TAIR 10
Match: AT4G24540.1 (AGAMOUS-like 24 ) HSP 1 Score: 213.4 bits (542), Expect = 2.2e-55 Identity = 126/224 (56.25%), Postives = 170/224 (75.89%), Query Frame = 0
BLAST of CmaCh03G008420 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 ) HSP 1 Score: 122.9 bits (307), Expect = 3.8e-28 Identity = 86/219 (39.27%), Postives = 126/219 (57.53%), Query Frame = 0
BLAST of CmaCh03G008420 vs. TAIR 10
Match: AT4G37940.1 (AGAMOUS-like 21 ) HSP 1 Score: 122.5 bits (306), Expect = 5.0e-28 Identity = 74/182 (40.66%), Postives = 117/182 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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