CmaCh03G007030 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G007030
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Zinc finger, B-box
Location	Cma_Chr03: 5739510 .. 5740812 (+)
RNA-Seq Expression	CmaCh03G007030
Synteny	CmaCh03G007030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCTGACAATTCCAGCCACCTAATCCTTTTATCCTCTGTTTATATTATATTATCTTCTCTTCTTTTCTTTCTCTCTCTCTATTATTGTCATAACCTAACAGCAGCAGCCGACACCAAAGAAAGAACATCATCACATATCTGAAACTGGCCCGGGACGATAAAAACCCGACGAAACTTTAAAGATACCCTTAATTTTCAGGGCTTCATTGAGAGTTATGTGTTTTTTGTGAAGTTTACGAGGTGGGTTTTTGAAATTGAACGTAAAGTTTTGATCTTTTTGATGGGTTTTGTTGTGGGTGGCAATGAGTGAGGAGGATAAAAGCCATCAGTTTTGATGAGGATACTCTGTGATTCCTGCGAAACTGCTGCAGCAACTTTGTTTTGTGCTGCTGACGAGGCTGCTCTCTGCACAGCCTGCGATGCAAAGGTATATAAAACCAAAGTGTGTGCGTGTATTAATTTTGGAAGTCTTTTGCTGATATATGTGTTTGGGCAGGTGCACATGTGCAACAAGCTTGCGAGCCGCCATGTAAGGGTTGGGCTCGCAAATCCAAGCGAAGTTCCTCGCTGTGATATATGTGAGAATGCACCAGGTATAATCATTTTGTCTTGTTTTTTTTCTGTGATGTTTTTGTAAAGGTTAACATTCGGCGAGAAATTTATAAAATTTGCGCAGCTTTCTTTTGGTGTGAGATAGATGGGAGTTCTTTGTGTTTACAATGCGATGTGATTGTTCATGTGGGAGGTAAAAGAATGCACAAGAGATATCTTCGGCTGAGGCAGAGAGTTGAGGTTGGTGATTTTATCACATCCTTCTCTCTTTACATTCATACAAGATTAAGCTTTGTTTGTTTGATTGGTTTGCAGTTTCCAGGGGATACACAAAATGATGTGAAGGGCTCAAATGCAAAGCCGATGGAACAGGTTGAGACAGTGAGAGGCCAAAATCAAGAAAGGGGTGAGGAGAATGAGAAGCAGGAAGAAGATTTGAGATTCTCTGGTGTTAAAGGGTATTCCAATGGAGATAGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTGAACATTTAGCAGCTTTAGTACTACTTTGTATTGCTACAATTTTCAATTTTAACTTTGATAATGAGTATCTGAACATTGTAAACTCATGATTCTAAAATTGCTACCCAAACCAGGAATTGGATGCTCAGGAACTAAGCCTCATCTAACCAAAGCTCACTTCATTGAATTGAATTAAGTGTAAGAAGCAATCTTTTGTAACTCCATGATTAGCTTGGAACAAAGCGACATGGAGCCGCAAG

mRNA sequence

CTCCCTGACAATTCCAGCCACCTAATCCTTTTATCCTCTGTTTATATTATATTATCTTCTCTTCTTTTCTTTCTCTCTCTCTATTATTGTCATAACCTAACAGCAGCAGCCGACACCAAAGAAAGAACATCATCACATATCTGAAACTGGCCCGGGACGATAAAAACCCGACGAAACTTTAAAGATACCCTTAATTTTCAGGGCTTCATTGAGAGTTATGTGTTTTTTGTGAAGTTTACGAGGTGGGTTTTTGAAATTGAACGTAAAGTTTTGATCTTTTTGATGGGTTTTGTTGTGGGTGGCAATGAGTGAGGAGGATAAAAGCCATCAGTTTTGATGAGGATACTCTGTGATTCCTGCGAAACTGCTGCAGCAACTTTGTTTTGTGCTGCTGACGAGGCTGCTCTCTGCACAGCCTGCGATGCAAAGGTGCACATGTGCAACAAGCTTGCGAGCCGCCATGTAAGGGTTGGGCTCGCAAATCCAAGCGAAGTTCCTCGCTGTGATATATGTGAGAATGCACCAGCTTTCTTTTGGTGTGAGATAGATGGGAGTTCTTTGTGTTTACAATGCGATGTGATTGTTCATGTGGGAGGTAAAAGAATGCACAAGAGATATCTTCGGCTGAGGCAGAGAGTTGAGTTTCCAGGGGATACACAAAATGATGTGAAGGGCTCAAATGCAAAGCCGATGGAACAGGTTGAGACAGTGAGAGGCCAAAATCAAGAAAGGGGTGAGGAGAATGAGAAGCAGGAAGAAGATTTGAGATTCTCTGGTGTTAAAGGGTATTCCAATGGAGATAGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTGAACATTTAGCAGCTTTAGTACTACTTTGTATTGCTACAATTTTCAATTTTAACTTTGATAATGAGTATCTGAACATTGTAAACTCATGATTCTAAAATTGCTACCCAAACCAGGAATTGGATGCTCAGGAACTAAGCCTCATCTAACCAAAGCTCACTTCATTGAATTGAATTAAGTGTAAGAAGCAATCTTTTGTAACTCCATGATTAGCTTGGAACAAAGCGACATGGAGCCGCAAG

Coding sequence (CDS)

ATGAGGATACTCTGTGATTCCTGCGAAACTGCTGCAGCAACTTTGTTTTGTGCTGCTGACGAGGCTGCTCTCTGCACAGCCTGCGATGCAAAGGTGCACATGTGCAACAAGCTTGCGAGCCGCCATGTAAGGGTTGGGCTCGCAAATCCAAGCGAAGTTCCTCGCTGTGATATATGTGAGAATGCACCAGCTTTCTTTTGGTGTGAGATAGATGGGAGTTCTTTGTGTTTACAATGCGATGTGATTGTTCATGTGGGAGGTAAAAGAATGCACAAGAGATATCTTCGGCTGAGGCAGAGAGTTGAGTTTCCAGGGGATACACAAAATGATGTGAAGGGCTCAAATGCAAAGCCGATGGAACAGGTTGAGACAGTGAGAGGCCAAAATCAAGAAAGGGGTGAGGAGAATGAGAAGCAGGAAGAAGATTTGAGATTCTCTGGTGTTAAAGGGTATTCCAATGGAGATAGGCATTCCAAGCGGCCTAATAAAGTGATTGATTTGAACATTTAG

Protein sequence

MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICENAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPMEQVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI

Homology

[Close]

BLAST of CmaCh03G007030 vs. ExPASy Swiss-Prot
Match: Q9SJU5 (B-box zinc finger protein 18 OS=Arabidopsis thaliana OX=3702 GN=BBX18 PE=1 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 6.9e-47
Identity = 96/168 (57.14%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCD+CE+AAA +FCAADEAALC +CD KVH CNKLASRH+RVGLA+PS  P CDICE
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAPAFF+CEIDGSSLCLQCD++VHVGGKR H+R+L LRQR+EFPGD  N       +  +
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLR-CQ 120

Query: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLN 169
           +  + RGQ      +++    DL  +  + +  G   S    + ID+N
Sbjct: 121 KASSGRGQESNGNGDHDHNMIDLNSNPQRVHEPG---SHNQEEGIDVN 164

[Close]

BLAST of CmaCh03G007030 vs. ExPASy Swiss-Prot
Match: C0SVM5 (B-box zinc finger protein 19 OS=Arabidopsis thaliana OX=3702 GN=BBX19 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 6.9e-47
Identity = 93/143 (65.03%), Postives = 107/143 (74.83%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCD+CE AAA +FCAADEAALC  CD KVHMCNKLASRHVRVGLA PS  P CDICE
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAPAFF+CEIDGSSLCLQCD++VHVGGKR H R+L LRQR+EFPGD     K       +
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGD-----KPKENNTRD 120

Query: 121 QVETVRGQNQERGEENEKQEEDL 144
            ++  R      GE N K ++++
Sbjct: 121 NLQNQRVSTNGNGEANGKIDDEM 138

[Close]

BLAST of CmaCh03G007030 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 1.7e-21
Identity = 57/128 (44.53%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGL-ANPSEVPRCDIC 60
           M+I C+ CE A AT+ C ADEAALC ACD K+H  NKLA +H RV L A+ S +P+CDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  ENAPAFFWCEIDGSSLCLQCDVIVHVGGKRM--HKRYLRLRQRVEFPG-DTQNDVKGSNA 120
           + A  FF+C  D + LC +CDV +H     +  H+R+L    +V     DT    K S  
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120

Query: 121 KPMEQVET 125
              + +ET
Sbjct: 121 NDDKTMET 128

[Close]

BLAST of CmaCh03G007030 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.2e-20
Identity = 49/98 (50.00%), Postives = 63/98 (64.29%), Query Frame = 0


Query: 1  MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPS-EVPRCDIC 60
          M+I CD CE A AT+ C ADEAALC  CD ++H  NKLAS+H R+ L + S + PRCDIC
Sbjct: 1  MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61 ENAPAFFWCEIDGSSLCLQCDVIVHVGGKRM--HKRYL 96
          +   AF +C  D + LC  CD  +HV   R   H+R+L
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFL 98

[Close]

BLAST of CmaCh03G007030 vs. ExPASy Swiss-Prot
Match: Q0IGM7 (B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.5e-17
Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 0


Query: 1  MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPS--EVPRCDI 60
          M+I C  C+   A++FC ADEAALC  CD  VH  NKLA +H+R  L +P+  + P CDI
Sbjct: 1  MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60

Query: 61 CENAPAFFWCEIDGSSLCLQCDVIVHVGGK--RMHKRYL 96
          C    A  +C+ D + LC +CD+ +H   +  + H R+L
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFL 99

[Close]

BLAST of CmaCh03G007030 vs. ExPASy TrEMBL
Match: A0A6J1IVH8 (B-box zinc finger protein 18-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478764 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 7.3e-92
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME
Sbjct: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120

Query: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 170
           QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI
Sbjct: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 169

[Close]

BLAST of CmaCh03G007030 vs. ExPASy TrEMBL
Match: A0A6J1GE89 (B-box zinc finger protein 19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453156 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 4.4e-89
Identity = 165/169 (97.63%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPS+VPRCDICE
Sbjct: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSQVPRCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKG NAKPME
Sbjct: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGPNAKPME 120

Query: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 170
           QVETVRGQNQERGEE EKQEEDLRFSGVKGYSNGD HSKRPNKVIDLNI
Sbjct: 121 QVETVRGQNQERGEEIEKQEEDLRFSGVKGYSNGDGHSKRPNKVIDLNI 169

[Close]

BLAST of CmaCh03G007030 vs. ExPASy TrEMBL
Match: A0A6J1IRU8 (B-box zinc finger protein 18-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478764 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.9e-84
Identity = 162/169 (95.86%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAP       DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME
Sbjct: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120

Query: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 170
           QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI
Sbjct: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 162

[Close]

BLAST of CmaCh03G007030 vs. ExPASy TrEMBL
Match: A0A6J1GE32 (B-box zinc finger protein 19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453156 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 158/169 (93.49%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPS+VPRCDICE
Sbjct: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSQVPRCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAP       DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKG NAKPME
Sbjct: 61  NAP-------DGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGPNAKPME 120

Query: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 170
           QVETVRGQNQERGEE EKQEEDLRFSGVKGYSNGD HSKRPNKVIDLNI
Sbjct: 121 QVETVRGQNQERGEEIEKQEEDLRFSGVKGYSNGDGHSKRPNKVIDLNI 162

[Close]

BLAST of CmaCh03G007030 vs. ExPASy TrEMBL
Match: A0A5A7SKM7 (B-box zinc finger protein 19-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G001490 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.0e-74
Identity = 144/170 (84.71%), Postives = 153/170 (90.00%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCE+AAATLFCAADEAALC  CD KVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCESAAATLFCAADEAALCAVCDTKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAPAFF+CEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGD +ND K  N KPME
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDKRNDGKDQNVKPME 120

Query: 121 QVETVRGQNQERGEENEKQEEDLRFSGV-KGYSNGDRHSKRPNKVIDLNI 170
           QVE V+GQN+ERGE   ++ E+LR SGV K YSNGD HSKRPNKVIDLN+
Sbjct: 121 QVEKVKGQNEERGE--IEKHEELRVSGVEKDYSNGDGHSKRPNKVIDLNM 168

[Close]

BLAST of CmaCh03G007030 vs. NCBI nr
Match: XP_022978974.1 (B-box zinc finger protein 18-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 346.3 bits (887), Expect = 1.5e-91
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME
Sbjct: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120

Query: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 170
           QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI
Sbjct: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 169

[Close]

BLAST of CmaCh03G007030 vs. NCBI nr
Match: KAG6603926.1 (B-box zinc finger protein 19, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034106.1 B-box zinc finger protein 19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 340.9 bits (873), Expect = 6.3e-90
Identity = 167/169 (98.82%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKG NAKPME
Sbjct: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGPNAKPME 120

Query: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 170
           QVETVRGQNQERGEE EKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI
Sbjct: 121 QVETVRGQNQERGEEIEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 169

[Close]

BLAST of CmaCh03G007030 vs. NCBI nr
Match: XP_023522538.1 (B-box zinc finger protein 18-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339.7 bits (870), Expect = 1.4e-89
Identity = 166/169 (98.22%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKG NAKPME
Sbjct: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGPNAKPME 120

Query: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 170
           QVETVRGQNQERGEE EKQEEDLRFSGVKGYSN DRHSKRPNKVIDLNI
Sbjct: 121 QVETVRGQNQERGEETEKQEEDLRFSGVKGYSNADRHSKRPNKVIDLNI 169

[Close]

BLAST of CmaCh03G007030 vs. NCBI nr
Match: XP_023543376.1 (B-box zinc finger protein 19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339.3 bits (869), Expect = 1.8e-89
Identity = 166/169 (98.22%), Postives = 167/169 (98.82%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE
Sbjct: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKG NAKP+E
Sbjct: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGPNAKPVE 120

Query: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 170
           QVETVRGQNQERGEE EKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI
Sbjct: 121 QVETVRGQNQERGEEIEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 169

[Close]

BLAST of CmaCh03G007030 vs. NCBI nr
Match: XP_022949899.1 (B-box zinc finger protein 19-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 337.0 bits (863), Expect = 9.2e-89
Identity = 165/169 (97.63%), Postives = 166/169 (98.22%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPS+VPRCDICE
Sbjct: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSQVPRCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKG NAKPME
Sbjct: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGPNAKPME 120

Query: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLNI 170
           QVETVRGQNQERGEE EKQEEDLRFSGVKGYSNGD HSKRPNKVIDLNI
Sbjct: 121 QVETVRGQNQERGEEIEKQEEDLRFSGVKGYSNGDGHSKRPNKVIDLNI 169

[Close]

BLAST of CmaCh03G007030 vs. TAIR 10
Match: AT2G21320.1 (B-box zinc finger family protein )

HSP 1 Score: 188.3 bits (477), Expect = 4.9e-48
Identity = 96/168 (57.14%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCD+CE+AAA +FCAADEAALC +CD KVH CNKLASRH+RVGLA+PS  P CDICE
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAPAFF+CEIDGSSLCLQCD++VHVGGKR H+R+L LRQR+EFPGD  N       +  +
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLR-CQ 120

Query: 121 QVETVRGQNQERGEENEKQEEDLRFSGVKGYSNGDRHSKRPNKVIDLN 169
           +  + RGQ      +++    DL  +  + +  G   S    + ID+N
Sbjct: 121 KASSGRGQESNGNGDHDHNMIDLNSNPQRVHEPG---SHNQEEGIDVN 164

[Close]

BLAST of CmaCh03G007030 vs. TAIR 10
Match: AT4G38960.1 (B-box type zinc finger family protein )

HSP 1 Score: 188.3 bits (477), Expect = 4.9e-48
Identity = 93/143 (65.03%), Postives = 107/143 (74.83%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGLANPSEVPRCDICE 60
           MRILCD+CE AAA +FCAADEAALC  CD KVHMCNKLASRHVRVGLA PS  P CDICE
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60

Query: 61  NAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPME 120
           NAPAFF+CEIDGSSLCLQCD++VHVGGKR H R+L LRQR+EFPGD     K       +
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGD-----KPKENNTRD 120

Query: 121 QVETVRGQNQERGEENEKQEEDL 144
            ++  R      GE N K ++++
Sbjct: 121 NLQNQRVSTNGNGEANGKIDDEM 138

[Close]

BLAST of CmaCh03G007030 vs. TAIR 10
Match: AT4G38960.3 (B-box type zinc finger family protein )

HSP 1 Score: 167.5 bits (423), Expect = 9.0e-42
Identity = 93/186 (50.00%), Postives = 107/186 (57.53%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAK----------------------------- 60
           MRILCD+CE AAA +FCAADEAALC  CD K                             
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKALHMRLDISKCSESVKRVQIVETSSLIWW 60

Query: 61  --------------VHMCNKLASRHVRVGLANPSEVPRCDICENAPAFFWCEIDGSSLCL 120
                         VHMCNKLASRHVRVGLA PS  P CDICENAPAFF+CEIDGSSLCL
Sbjct: 61  IKMGTFCLQSLHLVVHMCNKLASRHVRVGLAEPSNAPCCDICENAPAFFYCEIDGSSLCL 120

Query: 121 QCDVIVHVGGKRMHKRYLRLRQRVEFPGDTQNDVKGSNAKPMEQVETVRGQNQERGEENE 144
           QCD++VHVGGKR H R+L LRQR+EFPGD     K       + ++  R      GE N 
Sbjct: 121 QCDMVVHVGGKRTHGRFLLLRQRIEFPGD-----KPKENNTRDNLQNQRVSTNGNGEANG 180

[Close]

BLAST of CmaCh03G007030 vs. TAIR 10
Match: AT4G38960.2 (B-box type zinc finger family protein )

HSP 1 Score: 137.5 bits (345), Expect = 9.9e-33
Identity = 67/110 (60.91%), Postives = 79/110 (71.82%), Query Frame = 0


Query: 34  MCNKLASRHVRVGLANPSEVPRCDICENAPAFFWCEIDGSSLCLQCDVIVHVGGKRMHKR 93
           MCNKLASRHVRVGLA PS  P CDICENAPAFF+CEIDGSSLCLQCD++VHVGGKR H R
Sbjct: 1   MCNKLASRHVRVGLAEPSNAPCCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGR 60

Query: 94  YLRLRQRVEFPGDTQNDVKGSNAKPMEQVETVRGQNQERGEENEKQEEDL 144
           +L LRQR+EFPGD     K       + ++  R      GE N K ++++
Sbjct: 61  FLLLRQRIEFPGD-----KPKENNTRDNLQNQRVSTNGNGEANGKIDDEM 105

[Close]

BLAST of CmaCh03G007030 vs. TAIR 10
Match: AT1G78600.1 (light-regulated zinc finger protein 1 )

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-22
Identity = 57/128 (44.53%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 1   MRILCDSCETAAATLFCAADEAALCTACDAKVHMCNKLASRHVRVGL-ANPSEVPRCDIC 60
           M+I C+ CE A AT+ C ADEAALC ACD K+H  NKLA +H RV L A+ S +P+CDIC
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  ENAPAFFWCEIDGSSLCLQCDVIVHVGGKRM--HKRYLRLRQRVEFPG-DTQNDVKGSNA 120
           + A  FF+C  D + LC +CDV +H     +  H+R+L    +V     DT    K S  
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKSSPT 120

Query: 121 KPMEQVET 125
              + +ET
Sbjct: 121 NDDKTMET 128

The following BLAST results are available for this feature:

BLAST of CmaCh03G007030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJU5	6.9e-47	57.14	B-box zinc finger protein 18 OS=Arabidopsis thaliana OX=3702 GN=BBX18 PE=1 SV=2	[more]
C0SVM5	6.9e-47	65.03	B-box zinc finger protein 19 OS=Arabidopsis thaliana OX=3702 GN=BBX19 PE=1 SV=1	[more]
Q9SYM2	1.7e-21	44.53	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
Q96288	7.2e-20	50.00	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]
Q0IGM7	1.5e-17	42.42	B-box zinc finger protein 20 OS=Arabidopsis thaliana OX=3702 GN=BBX20 PE=1 SV=1	[more]

BLAST of CmaCh03G007030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IVH8	7.3e-92	100.00	B-box zinc finger protein 18-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1GE89	4.4e-89	97.63	B-box zinc finger protein 19-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1IRU8	1.9e-84	95.86	B-box zinc finger protein 18-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1GE32	1.2e-81	93.49	B-box zinc finger protein 19-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A5A7SKM7	4.0e-74	84.71	B-box zinc finger protein 19-like isoform X1 OS=Cucumis melo var. makuwa OX=1194...	[more]

BLAST of CmaCh03G007030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978974.1	1.5e-91	100.00	B-box zinc finger protein 18-like isoform X1 [Cucurbita maxima]	[more]
KAG6603926.1	6.3e-90	98.82	B-box zinc finger protein 19, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_023522538.1	1.4e-89	98.22	B-box zinc finger protein 18-like [Cucurbita pepo subsp. pepo]	[more]
XP_023543376.1	1.8e-89	98.22	B-box zinc finger protein 19-like [Cucurbita pepo subsp. pepo]	[more]
XP_022949899.1	9.2e-89	97.63	B-box zinc finger protein 19-like isoform X1 [Cucurbita moschata]	[more]

BLAST of CmaCh03G007030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21320.1	4.9e-48	57.14	B-box zinc finger family protein	[more]
AT4G38960.1	4.9e-48	65.03	B-box type zinc finger family protein	[more]
AT4G38960.3	9.0e-42	50.00	B-box type zinc finger family protein	[more]
AT4G38960.2	9.9e-33	60.91	B-box type zinc finger family protein	[more]
AT1G78600.1	1.2e-22	44.53	light-regulated zinc finger protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 4..47 e-value: 2.3E-5 score: 33.8 coord: 51..96 e-value: 1.8E-8 score: 44.1
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 4..34 e-value: 7.8E-6 score: 25.9 coord: 52..85 e-value: 9.5E-6 score: 25.7
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 10.508935
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 1..94 e-value: 1.5E-6 score: 30.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 105..169
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..126
None	No IPR available	PANTHER	PTHR31832:SF5	B-BOX ZINC FINGER PROTEIN 19	coord: 1..168
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..168
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 4..47 e-value: 9.75149E-18 score: 70.4043

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G007030.1	CmaCh03G007030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding