Homology
BLAST of CmaCh03G004370 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 985.7 bits (2547), Expect = 2.9e-286
Identity = 486/775 (62.71%), Postives = 617/775 (79.61%), Query Frame = 0
Query: 1 MAF-TCVKCYPW------PLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSP 60
MAF +C+K YP+ L H S + P S++ F S H A+ SS
Sbjct: 1 MAFSSCLKFYPFSISQAVTLTHHSFSLNLTPPSSTISF----ASPHSAALSS-------- 60
Query: 61 NVHHLPPDFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSF 120
T +L+++LR Q D+ AALR+FN ASK+PNF P + Y+EIL +LG++GSF
Sbjct: 61 ---------TDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSF 120
Query: 121 EYMRCVLEEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNV 180
+ M+ +LE+MK CE+ FLI ++SYA+FEL DE++ +V M DE+ +KPDT FYN
Sbjct: 121 DDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNR 180
Query: 181 LLNVLVDGSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYG 240
+LN+LVDG+ LKLVE +H+ M I+ D+STFN+LIKALC+AHQ+RPAILM+E+MPSYG
Sbjct: 181 MLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 240
Query: 241 LSPDETTFTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQAL 300
L PDE TFTT+MQG+IEEG+LDGALRI+E MVE+GC ++++VNV+++GFCK+GR++ AL
Sbjct: 241 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 300
Query: 301 SFIQESEN-EGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISG 360
+FIQE N +GF PDQ+T+NTLVNGLCK G KHA+E++D ML G+DPD YTYNS+ISG
Sbjct: 301 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 360
Query: 361 LCKLGEIDEAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPD 420
LCKLGE+ EA ++LD M++RDCSPN VTYNT+IS+LCK +VEEATE+A L+ KG+LPD
Sbjct: 361 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 420
Query: 421 VCTFNFLIQGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLK 480
VCTFN LIQGLCL+ NHR AMELFEEM+ KG +PDE TYNMLIDSLCS GK +EAL +LK
Sbjct: 421 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 480
Query: 481 EMESSGCAHNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSR 540
+ME SGCA +V+ YNTLIDGFCK + EAEEIFDEME+ G+SRNSVTYNTLIDGLCKSR
Sbjct: 481 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 540
Query: 541 RMADAAHLMDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYG 600
R+ DAA LMDQMIMEG K DK+TYNS LTHFC+ GDI+KA+DIV+ MT +GC PDIVTYG
Sbjct: 541 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 600
Query: 601 TLISGLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEK 660
TLISGLCKAGR++VAS+LLRSIQMKG+ LTP AYNPVIQ LF++ +T EA+ L REMLE+
Sbjct: 601 TLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 660
Query: 661 AD-PPDSLTYKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMED 720
+ PPD+++Y+IV+RGLCNGGG I EAVDF +E++EKG +PEFSS MLAEGL +L+ME+
Sbjct: 661 NEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEE 720
Query: 721 TLVKLVDMIMEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 767
TLVKLV+M+M++ARFS+ E+S ++G LKIRKF DAL+TLGG+L+ P +TYR R
Sbjct: 721 TLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTYRSR 754
BLAST of CmaCh03G004370 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 342.0 bits (876), Expect = 1.7e-92
Identity = 190/638 (29.78%), Postives = 322/638 (50.47%), Query Frame = 0
Query: 63 TPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVLEE 122
TP QL + L + ++ +F+W Q + S Y+ ++ KLG G F+ + +L +
Sbjct: 77 TPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQ 136
Query: 123 MKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVDGS 182
MK G +F+ ++ Y K + ++ EM + Y +P YNV+L +LV G+
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGN 196
Query: 183 KLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFT 242
K+ + M+ R+I + TF +++KA C +++ A+ ++ +M +G P+ +
Sbjct: 197 CHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQ 256
Query: 243 TIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESENE 302
T++ + ++ AL++ E M GC+ T N +I G CK RI++A +
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
Query: 303 GFRPDQFTYNTLVNGLCKVGCAKHAMEVV------------------------------- 362
GF PD TY L+NGLCK+G A ++
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 363 -DAMLLGGFDPDTYTYNSLISGLCKLGEIDEAAKILDHMVSRDCSPNAVTYNTIISSLCK 422
D + G PD TYNSLI G K G + A ++L M ++ C PN +Y ++ CK
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 423 TKRVEEATEIACFLSRKGVLPDVCTFNFLIQGLCLSNNHRNAMELFEEMKGKGSQPDELT 482
+++EA + +S G+ P+ FN LI C + A+E+F EM KG +PD T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 483 YNMLIDSLCSSGKPEEALKLLKEMESSGCAHNVVIYNTLIDGFCKNKRIEEAEEIFDEME 542
+N LI LC + + AL LL++M S G N V YNTLI+ F + I+EA ++ +EM
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 543 LQGISRNSVTYNTLIDGLCKSRRMADAAHLMDQMIMEGLKLDKFTYNSFLTHFCKTGDIQ 602
QG + +TYN+LI GLC++ + A L ++M+ +G + N + C++G ++
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 603 KASDIVETMTLSGCNPDIVTYGTLISGLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVI 662
+A + + M L G PDIVT+ +LI+GLC+AGR++ + R +Q +G+ +N ++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 663 QALFKRNRTHEAMRLVREMLEKADPPDSLTYKIVYRGL 669
L K ++A L+ E +E P+ T+ I+ + +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
BLAST of CmaCh03G004370 vs. ExPASy Swiss-Prot
Match:
Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)
HSP 1 Score: 336.7 bits (862), Expect = 7.1e-91
Identity = 211/699 (30.19%), Postives = 330/699 (47.21%), Query Frame = 0
Query: 60 PDFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCV 119
P PK + ++ Q+D + AL +FN K+ F + S Y+ ++ KLG G FE M V
Sbjct: 3 PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV 62
Query: 120 LEEMK-LIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVL 179
L +M+ +G + G+++ +K+Y + E + + + M D Y +P YN +++VL
Sbjct: 63 LVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVL 122
Query: 180 VDGSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 239
VD + M R I D+ +F I +K+ CK + A+ ++ M S G +
Sbjct: 123 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 182
Query: 240 TTFTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQE 299
+ T++ GF EE + M+ G T N L+ CK+G + + + +
Sbjct: 183 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 242
Query: 300 SENEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGE 359
G P+ FTYN + GLC+ G A+ +V ++ G PD TYN+LI GLCK +
Sbjct: 243 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 302
Query: 360 IDEAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNF 419
EA L MV+ P++ TYNT+I+ CK V+ A I G +PD T+
Sbjct: 303 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 362
Query: 420 LIQGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSG 479
LI GLC A+ LF E GKG +P+ + YN LI L + G EA +L EM G
Sbjct: 363 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 422
Query: 480 CAHNVVIYNTLIDGFCK-----------------------------------NKRIEEAE 539
V +N L++G CK ++E A
Sbjct: 423 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 482
Query: 540 EIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHLMDQMIMEGLKLDKFTYNSFLTHF 599
EI D M G+ + TYN+L++GLCK+ + D M+ +G + FT+N L
Sbjct: 483 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 542
Query: 600 CKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCKAGRLQVASRLLRSIQ--MKGMVL 659
C+ + +A ++E M NPD VT+GTLI G CK G L A L R ++ K
Sbjct: 543 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 602
Query: 660 TPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLTYKIVYRGLCNGGGSIGEAVDF 719
TP YN +I A ++ A +L +EM+++ PD TY+++ G C G++ F
Sbjct: 603 TP-TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK-TGNVNLGYKF 662
Query: 720 TIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 721
+E++E G IP ++ + LC +ED + + +I
Sbjct: 663 LLEMMENGFIPSLTTLGRVINCLC---VEDRVYEAAGII 695
BLAST of CmaCh03G004370 vs. ExPASy Swiss-Prot
Match:
Q9SS81 (Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX=3702 GN=At3g09060 PE=2 SV=1)
HSP 1 Score: 320.9 bits (821), Expect = 4.0e-86
Identity = 189/659 (28.68%), Postives = 332/659 (50.38%), Query Frame = 0
Query: 59 PPDFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRC 118
P +PK +++ L+ +++ AA +F+ A++ P + S+ Y ILR+L + ++
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 119 VLEEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVL 178
++E ++ C+ D + L +K+Y K + D+ + + K M + + +P YN LLN
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 179 VDGSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 238
V+ + VES + + ++ T+N+LIK CK + A ++ M G PD
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 239 TTFTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDIT-VNVLINGFCKQGRIDQALSFIQ 298
+++T++ + G LD AL + + M E G + D+T N+LI+GF K+ A+
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERG-VAPDVTCYNILIDGFLKEKDHKTAMELWD 244
Query: 299 E-SENEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKL 358
E+ P+ T+N +++GL K G +++ + M + D YTY+SLI GLC
Sbjct: 245 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 304
Query: 359 GEIDEAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTF 418
G +D+A + + + R S + VTYNT++ C+ +++E+ E+ + K + ++ ++
Sbjct: 305 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSY 364
Query: 419 NFLIQGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMES 478
N LI+GL + A ++ M KG D+ TY + I LC +G +AL +++E+ES
Sbjct: 365 NILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 424
Query: 479 SGCAHNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMAD 538
SG +V Y ++ID CK KR+EEA + EM G+ NS N LI GL + R+ +
Sbjct: 425 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 484
Query: 539 AAHLMDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLIS 598
A+ + +M G + +YN + CK G +AS V+ M +G PD+ TY L+
Sbjct: 485 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 544
Query: 599 GLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPP 658
GLC+ ++ +A L G+ +N +I L + +AM ++ M +
Sbjct: 545 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 604
Query: 659 DSLTYKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLC-----SLAME 711
+ +TY + G G S A + + G P+ S+ + +GLC S AME
Sbjct: 605 NLVTYNTLMEGFFKVGDS-NRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAME 660
BLAST of CmaCh03G004370 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 312.8 bits (800), Expect = 1.1e-83
Identity = 206/745 (27.65%), Postives = 349/745 (46.85%), Query Frame = 0
Query: 25 ISNSSIFFSASVSDHLASTSSSNSVSCSP-NVHHLPPDFTPKQLIE-TLRRQRDEVAALR 84
I S F++S SD L + + + P +HHL +FTP+ L+ Q D+ L+
Sbjct: 8 IRRSLSTFASSPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILK 67
Query: 85 VFNWASKQPNF-----------VPSSSFYK--EILRK--LGKAGSFEYMRCVLEEMKLIG 144
NWA+ F + YK +IL + K EY V + ++
Sbjct: 68 FLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETY 127
Query: 145 --CEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVDGSK-L 204
C +F + VKSY++ L D+ + IV + + P YN +L+ + + +
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIV-HLAQAHGFMPGVLSYNAVLDATIRSKRNI 187
Query: 205 KLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTI 264
E+ M+ ++ ++ T+NILI+ C A
Sbjct: 188 SFAENVFKEMLESQVSPNVFTYNILIRGFCFA---------------------------- 247
Query: 265 MQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESENEGF 324
GN+D AL + + M GCL +T N LI+G+CK +ID ++ +G
Sbjct: 248 -------GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 307
Query: 325 RPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEIDEAAK 384
P+ +YN ++NGLC+ G K V+ M G+ D TYN+LI G CK G +A
Sbjct: 308 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 367
Query: 385 ILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLIQGLC 444
+ M+ +P+ +TY ++I S+CK + A E + +G+ P+ T+ L+ G
Sbjct: 368 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 427
Query: 445 LSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCAHNVV 504
A + EM G P +TYN LI+ C +GK E+A+ +L++M+ G + +VV
Sbjct: 428 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 487
Query: 505 IYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHLMDQM 564
Y+T++ GFC++ ++EA + EM +GI +++TY++LI G C+ RR +A L ++M
Sbjct: 488 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 547
Query: 565 IMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCKAGRL 624
+ GL D+FTY + + +C GD++KA + M G PD+VTY LI+GL K R
Sbjct: 548 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 607
Query: 625 QVASRLLRSIQMKGMVLTPQAYNPVIQ-----------ALFK----RNRTHEAMRLVREM 684
+ A RLL + + V + Y+ +I+ +L K + EA ++ M
Sbjct: 608 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 667
Query: 685 LEKADPPDSLTYKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAM 735
L K PD Y I+ G C G I +A E+++ G + + + L + L
Sbjct: 668 LGKNHKPDGTAYNIMIHGHCR-AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 715
BLAST of CmaCh03G004370 vs. ExPASy TrEMBL
Match:
A0A6J1IU01 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478408 PE=4 SV=1)
HSP 1 Score: 1538.5 bits (3982), Expect = 0.0e+00
Identity = 766/766 (100.00%), Postives = 766/766 (100.00%), Query Frame = 0
Query: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP
Sbjct: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL
Sbjct: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
Query: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD
Sbjct: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
Query: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT
Sbjct: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE
Sbjct: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
Query: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI
Sbjct: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA
Sbjct: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
Query: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL
Sbjct: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
Query: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK
Sbjct: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT
Sbjct: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
Query: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
Query: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 767
MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR
Sbjct: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 766
BLAST of CmaCh03G004370 vs. ExPASy TrEMBL
Match:
A0A6J1IQ10 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478408 PE=4 SV=1)
HSP 1 Score: 1468.4 bits (3800), Expect = 0.0e+00
Identity = 738/766 (96.34%), Postives = 738/766 (96.34%), Query Frame = 0
Query: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP
Sbjct: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL
Sbjct: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
Query: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD
Sbjct: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
Query: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAH
Sbjct: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAH----------------------- 240
Query: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
QGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE
Sbjct: 241 -----QGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
Query: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI
Sbjct: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA
Sbjct: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
Query: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL
Sbjct: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
Query: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK
Sbjct: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT
Sbjct: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
Query: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
Query: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 767
MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR
Sbjct: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 738
BLAST of CmaCh03G004370 vs. ExPASy TrEMBL
Match:
A0A6J1GDD5 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453158 PE=4 SV=1)
HSP 1 Score: 1421.0 bits (3677), Expect = 0.0e+00
Identity = 719/766 (93.86%), Postives = 723/766 (94.39%), Query Frame = 0
Query: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVS SPNVHHLPP
Sbjct: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSSSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL
Sbjct: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
Query: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD
Sbjct: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
Query: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAH
Sbjct: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAH----------------------- 240
Query: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
QGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE
Sbjct: 241 -----QGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
NEGFRPDQFTYNTLVNGLCKVG AKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGRAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
Query: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
EA KILDHMVSRDCSPNAVTYNTIIS+LCKTKRVEEATEIA FLSRKGVLPDVCTFN LI
Sbjct: 361 EAVKILDHMVSRDCSPNAVTYNTIISALCKTKRVEEATEIARFLSRKGVLPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
QGLCLSNNHRNAMELFEEMKGKGS+PDELTYNMLIDSLCSSGKPEEALKLLKEME SGCA
Sbjct: 421 QGLCLSNNHRNAMELFEEMKGKGSRPDELTYNMLIDSLCSSGKPEEALKLLKEMELSGCA 480
Query: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
NVV+YNTLIDGFCK KRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL
Sbjct: 481 RNVVMYNTLIDGFCKKKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
Query: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKLDKFTYNS LTHFCKTGDIQKASDIVETMT SGCNPDIVTYGTL SGLCK
Sbjct: 541 MDQMIMEGLKLDKFTYNSLLTHFCKTGDIQKASDIVETMTSSGCNPDIVTYGTLSSGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRL REMLEKADPPDSLT
Sbjct: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKADPPDSLT 660
Query: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
YKIVYRGLCNGGG IGEAVDFTIEIIE+GNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGLIGEAVDFTIEIIERGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
Query: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 767
MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIK RGR
Sbjct: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKPCRGR 738
BLAST of CmaCh03G004370 vs. ExPASy TrEMBL
Match:
A0A5A7SQ06 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00010 PE=4 SV=1)
HSP 1 Score: 1346.6 bits (3484), Expect = 0.0e+00
Identity = 668/766 (87.21%), Postives = 713/766 (93.08%), Query Frame = 0
Query: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
MAFTCVKCYPW LPH PLSFSSKPISNSSIFFSASVSD LAS+SSSN S SPNVH LPP
Sbjct: 1 MAFTCVKCYPWSLPHVPLSFSSKPISNSSIFFSASVSDQLASSSSSNFTSSSPNVHQLPP 60
Query: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
DFTPKQLIETLRRQ DEVAALRVFNWASKQPNFVPSSS Y+EILRKLGKAGSFEYMR VL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
EEMKL GCE DRGIFLIFV+SY KFELYDEVMGIVK MEDEYRIKPDT FYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
+KLKLVESAHSSMVRRRIRHD+STFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
FTTIMQG+IE GNLDGALRIKE M+EYGC CTD+TVNVLINGFCKQGRIDQALSFIQE+
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
NEGFRPDQFTYNTLVNGLCKVG AKHAMEVVDAMLLGG DPD YTYNSLISG CKLGEI+
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGFCKLGEIE 360
Query: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
EA KILD MVSRDCSPNAVTYNTIISSLCK RVEEATEIA L+ KGVLPDVCTFN LI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
QGLCLS+NH+NAMELFEEMKGKG +PDE TYNMLI+SLCSS K EEAL LLKEME SGCA
Sbjct: 421 QGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG+SR+SVTYN LIDGLCKS+R+ DAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
MDQMIMEGL+ DKFTYNS LTHFCKTGDI+KA+DIV+TMT SGCNPDIVTYGTLISGLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
AGR+QVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRL REMLEK++PPD++T
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
YKIVYRGLCNGGG IGEAVDFT+E+IE+GNIPE+SSF+MLAEGL +L+M+DTL+KLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEYSSFIMLAEGLYTLSMDDTLLKLVDMI 720
Query: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 767
ME+A+F + EIS IRG+LKIRKF DALSTLGGIL+D+YP ++YRGR
Sbjct: 721 MEKAKFKEREISTIRGFLKIRKFQDALSTLGGILDDMYPRRSYRGR 766
BLAST of CmaCh03G004370 vs. ExPASy TrEMBL
Match:
A0A1S3BHC3 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490047 PE=4 SV=1)
HSP 1 Score: 1346.6 bits (3484), Expect = 0.0e+00
Identity = 668/766 (87.21%), Postives = 713/766 (93.08%), Query Frame = 0
Query: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
MAFTCVKCYPW LPH PLSFSSKPISNSSIFFSASVSD LAS+SSSN S SPNVH LPP
Sbjct: 1 MAFTCVKCYPWSLPHVPLSFSSKPISNSSIFFSASVSDQLASSSSSNFTSSSPNVHQLPP 60
Query: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
DFTPKQLIETLRRQ DEVAALRVFNWASKQPNFVPSSS Y+EILRKLGKAGSFEYMR VL
Sbjct: 61 DFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVL 120
Query: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
EEMKL GCE DRGIFLIFV+SY KFELYDEVMGIVK MEDEYRIKPDT FYNVLLNVLVD
Sbjct: 121 EEMKLSGCEFDRGIFLIFVESYGKFELYDEVMGIVKVMEDEYRIKPDTRFYNVLLNVLVD 180
Query: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
+KLKLVESAHSSMVRRRIRHD+STFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT
Sbjct: 181 ANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
FTTIMQG+IE GNLDGALRIKE M+EYGC CTD+TVNVLINGFCKQGRIDQALSFIQE+
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMIEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
NEGFRPDQFTYNTLVNGLCKVG AKHAMEVVDAMLLGG DPD YTYNSLISG CKLGEI+
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGFCKLGEIE 360
Query: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
EA KILD MVSRDCSPNAVTYNTIISSLCK RVEEATEIA L+ KGVLPDVCTFN LI
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNTIISSLCKENRVEEATEIARLLTSKGVLPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
QGLCLS+NH+NAMELFEEMKGKG +PDE TYNMLI+SLCSS K EEAL LLKEME SGCA
Sbjct: 421 QGLCLSSNHKNAMELFEEMKGKGCRPDEFTYNMLIESLCSSRKLEEALNLLKEMELSGCA 480
Query: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQG+SR+SVTYN LIDGLCKS+R+ DAA L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNILIDGLCKSKRVEDAAQL 540
Query: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
MDQMIMEGL+ DKFTYNS LTHFCKTGDI+KA+DIV+TMT SGCNPDIVTYGTLISGLCK
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
AGR+QVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRL REMLEK++PPD++T
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKSEPPDAIT 660
Query: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
YKIVYRGLCNGGG IGEAVDFT+E+IE+GNIPE+SSF+MLAEGL +L+M+DTL+KLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEYSSFIMLAEGLYTLSMDDTLLKLVDMI 720
Query: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 767
ME+A+F + EIS IRG+LKIRKF DALSTLGGIL+D+YP ++YRGR
Sbjct: 721 MEKAKFKEREISTIRGFLKIRKFQDALSTLGGILDDMYPRRSYRGR 766
BLAST of CmaCh03G004370 vs. NCBI nr
Match:
XP_022978409.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like isoform X1 [Cucurbita maxima])
HSP 1 Score: 1538.5 bits (3982), Expect = 0.0e+00
Identity = 766/766 (100.00%), Postives = 766/766 (100.00%), Query Frame = 0
Query: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP
Sbjct: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL
Sbjct: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
Query: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD
Sbjct: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
Query: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT
Sbjct: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE
Sbjct: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
Query: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI
Sbjct: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA
Sbjct: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
Query: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL
Sbjct: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
Query: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK
Sbjct: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT
Sbjct: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
Query: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
Query: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 767
MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR
Sbjct: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 766
BLAST of CmaCh03G004370 vs. NCBI nr
Match:
KAG7033847.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1493.4 bits (3865), Expect = 0.0e+00
Identity = 747/766 (97.52%), Postives = 752/766 (98.17%), Query Frame = 0
Query: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
MAFTCVKCYPWP PHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVS SPNVHHLPP
Sbjct: 1 MAFTCVKCYPWPFPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSSSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL
Sbjct: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
Query: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD
Sbjct: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
Query: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEE+PSYGLSPDETT
Sbjct: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEIPSYGLSPDETT 240
Query: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE
Sbjct: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
NEGFRPDQFTYNTLVNGLCKVG AKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGRAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
Query: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
EA KILDHMVSRDCSPNAVTYNTIIS+LCKTKRVEEATEIA FLSRKGVLPDVCTFN LI
Sbjct: 361 EAVKILDHMVSRDCSPNAVTYNTIISALCKTKRVEEATEIARFLSRKGVLPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
QGLCLSNNHRNAMELFEEMKGKGS+PDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA
Sbjct: 421 QGLCLSNNHRNAMELFEEMKGKGSRPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
Query: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
NVV+YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL
Sbjct: 481 RNVVMYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
Query: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKLDKFTYNS LTHFCKTGDIQKASDIVETMT SGCNPDIVTYGTLISGLCK
Sbjct: 541 MDQMIMEGLKLDKFTYNSLLTHFCKTGDIQKASDIVETMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRL REMLEKADPPDSLT
Sbjct: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKADPPDSLT 660
Query: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
YKIVY GLCNGGG IGEAVDFTIEIIE+GNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI
Sbjct: 661 YKIVYHGLCNGGGPIGEAVDFTIEIIERGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
Query: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 767
MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIK RGR
Sbjct: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKPCRGR 766
BLAST of CmaCh03G004370 vs. NCBI nr
Match:
XP_023544844.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1475.7 bits (3819), Expect = 0.0e+00
Identity = 739/766 (96.48%), Postives = 748/766 (97.65%), Query Frame = 0
Query: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVS SPNVHHLPP
Sbjct: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSSSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
DFTPKQL+ETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL
Sbjct: 61 DFTPKQLVETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
Query: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD
Sbjct: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
Query: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT
Sbjct: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE
Sbjct: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
NEGFRPDQFTYNTL+NGLCKVG AKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEI+
Sbjct: 301 NEGFRPDQFTYNTLMNGLCKVGRAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEIN 360
Query: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
EA KILD MVSRDCSPNAVTYNTIISSLCK KRVEEATEIA FLSRKGVLPDVCTFN LI
Sbjct: 361 EAVKILDLMVSRDCSPNAVTYNTIISSLCKKKRVEEATEIARFLSRKGVLPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
QGLCLSNNHRNAMELFEEMKGKGS+PDELTYNMLIDSLCSSGK EEALKLLKEME SGCA
Sbjct: 421 QGLCLSNNHRNAMELFEEMKGKGSRPDELTYNMLIDSLCSSGKLEEALKLLKEMELSGCA 480
Query: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
NVV+YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL
Sbjct: 481 RNVVMYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
Query: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKLDKFTYNS LTHFCKTGDIQKASDIVETMT SGCNPDIVTYGTLISGLCK
Sbjct: 541 MDQMIMEGLKLDKFTYNSLLTHFCKTGDIQKASDIVETMTSSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQ+LFKRNRTHEAMRL REMLEK PPDS+T
Sbjct: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQSLFKRNRTHEAMRLFREMLEKGYPPDSIT 660
Query: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
YKIVYRGLCNGGG IGEAVDFTIEIIE+GNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGPIGEAVDFTIEIIERGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
Query: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 767
MEE RFSKSEISRIRGYLKIRKFHDALSTLGGILE+LYPIKT RGR
Sbjct: 721 MEEGRFSKSEISRIRGYLKIRKFHDALSTLGGILEELYPIKTCRGR 766
BLAST of CmaCh03G004370 vs. NCBI nr
Match:
XP_022978410.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like isoform X2 [Cucurbita maxima])
HSP 1 Score: 1468.4 bits (3800), Expect = 0.0e+00
Identity = 738/766 (96.34%), Postives = 738/766 (96.34%), Query Frame = 0
Query: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP
Sbjct: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL
Sbjct: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
Query: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD
Sbjct: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
Query: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAH
Sbjct: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAH----------------------- 240
Query: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
QGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE
Sbjct: 241 -----QGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
Query: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI
Sbjct: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA
Sbjct: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
Query: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL
Sbjct: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
Query: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK
Sbjct: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT
Sbjct: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
Query: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
Query: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 767
MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR
Sbjct: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 738
BLAST of CmaCh03G004370 vs. NCBI nr
Match:
XP_022949902.1 (pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like [Cucurbita moschata])
HSP 1 Score: 1421.0 bits (3677), Expect = 0.0e+00
Identity = 719/766 (93.86%), Postives = 723/766 (94.39%), Query Frame = 0
Query: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSPNVHHLPP 60
MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVS SPNVHHLPP
Sbjct: 1 MAFTCVKCYPWPLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSSSPNVHHLPP 60
Query: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL
Sbjct: 61 DFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVL 120
Query: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD
Sbjct: 121 EEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVD 180
Query: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAH
Sbjct: 181 GSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAH----------------------- 240
Query: 241 FTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
QGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE
Sbjct: 241 -----QGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESE 300
Query: 301 NEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
NEGFRPDQFTYNTLVNGLCKVG AKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID
Sbjct: 301 NEGFRPDQFTYNTLVNGLCKVGRAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEID 360
Query: 361 EAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLI 420
EA KILDHMVSRDCSPNAVTYNTIIS+LCKTKRVEEATEIA FLSRKGVLPDVCTFN LI
Sbjct: 361 EAVKILDHMVSRDCSPNAVTYNTIISALCKTKRVEEATEIARFLSRKGVLPDVCTFNSLI 420
Query: 421 QGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCA 480
QGLCLSNNHRNAMELFEEMKGKGS+PDELTYNMLIDSLCSSGKPEEALKLLKEME SGCA
Sbjct: 421 QGLCLSNNHRNAMELFEEMKGKGSRPDELTYNMLIDSLCSSGKPEEALKLLKEMELSGCA 480
Query: 481 HNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
NVV+YNTLIDGFCK KRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL
Sbjct: 481 RNVVMYNTLIDGFCKKKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHL 540
Query: 541 MDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCK 600
MDQMIMEGLKLDKFTYNS LTHFCKTGDIQKASDIVETMT SGCNPDIVTYGTL SGLCK
Sbjct: 541 MDQMIMEGLKLDKFTYNSLLTHFCKTGDIQKASDIVETMTSSGCNPDIVTYGTLSSGLCK 600
Query: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLT 660
AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRL REMLEKADPPDSLT
Sbjct: 601 AGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLFREMLEKADPPDSLT 660
Query: 661 YKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
YKIVYRGLCNGGG IGEAVDFTIEIIE+GNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI
Sbjct: 661 YKIVYRGLCNGGGLIGEAVDFTIEIIERGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 720
Query: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 767
MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIK RGR
Sbjct: 721 MEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKPCRGR 738
BLAST of CmaCh03G004370 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 985.7 bits (2547), Expect = 2.1e-287
Identity = 486/775 (62.71%), Postives = 617/775 (79.61%), Query Frame = 0
Query: 1 MAF-TCVKCYPW------PLPHAPLSFSSKPISNSSIFFSASVSDHLASTSSSNSVSCSP 60
MAF +C+K YP+ L H S + P S++ F S H A+ SS
Sbjct: 1 MAFSSCLKFYPFSISQAVTLTHHSFSLNLTPPSSTISF----ASPHSAALSS-------- 60
Query: 61 NVHHLPPDFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSF 120
T +L+++LR Q D+ AALR+FN ASK+PNF P + Y+EIL +LG++GSF
Sbjct: 61 ---------TDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSF 120
Query: 121 EYMRCVLEEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNV 180
+ M+ +LE+MK CE+ FLI ++SYA+FEL DE++ +V M DE+ +KPDT FYN
Sbjct: 121 DDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNR 180
Query: 181 LLNVLVDGSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYG 240
+LN+LVDG+ LKLVE +H+ M I+ D+STFN+LIKALC+AHQ+RPAILM+E+MPSYG
Sbjct: 181 MLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYG 240
Query: 241 LSPDETTFTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQAL 300
L PDE TFTT+MQG+IEEG+LDGALRI+E MVE+GC ++++VNV+++GFCK+GR++ AL
Sbjct: 241 LVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDAL 300
Query: 301 SFIQESEN-EGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISG 360
+FIQE N +GF PDQ+T+NTLVNGLCK G KHA+E++D ML G+DPD YTYNS+ISG
Sbjct: 301 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 360
Query: 361 LCKLGEIDEAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPD 420
LCKLGE+ EA ++LD M++RDCSPN VTYNT+IS+LCK +VEEATE+A L+ KG+LPD
Sbjct: 361 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 420
Query: 421 VCTFNFLIQGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLK 480
VCTFN LIQGLCL+ NHR AMELFEEM+ KG +PDE TYNMLIDSLCS GK +EAL +LK
Sbjct: 421 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 480
Query: 481 EMESSGCAHNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSR 540
+ME SGCA +V+ YNTLIDGFCK + EAEEIFDEME+ G+SRNSVTYNTLIDGLCKSR
Sbjct: 481 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 540
Query: 541 RMADAAHLMDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYG 600
R+ DAA LMDQMIMEG K DK+TYNS LTHFC+ GDI+KA+DIV+ MT +GC PDIVTYG
Sbjct: 541 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 600
Query: 601 TLISGLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEK 660
TLISGLCKAGR++VAS+LLRSIQMKG+ LTP AYNPVIQ LF++ +T EA+ L REMLE+
Sbjct: 601 TLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQ 660
Query: 661 AD-PPDSLTYKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAMED 720
+ PPD+++Y+IV+RGLCNGGG I EAVDF +E++EKG +PEFSS MLAEGL +L+ME+
Sbjct: 661 NEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEE 720
Query: 721 TLVKLVDMIMEEARFSKSEISRIRGYLKIRKFHDALSTLGGILEDLYPIKTYRGR 767
TLVKLV+M+M++ARFS+ E+S ++G LKIRKF DAL+TLGG+L+ P +TYR R
Sbjct: 721 TLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTYRSR 754
BLAST of CmaCh03G004370 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 342.0 bits (876), Expect = 1.2e-93
Identity = 190/638 (29.78%), Postives = 322/638 (50.47%), Query Frame = 0
Query: 63 TPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCVLEE 122
TP QL + L + ++ +F+W Q + S Y+ ++ KLG G F+ + +L +
Sbjct: 77 TPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQ 136
Query: 123 MKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVDGS 182
MK G +F+ ++ Y K + ++ EM + Y +P YNV+L +LV G+
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGN 196
Query: 183 KLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFT 242
K+ + M+ R+I + TF +++KA C +++ A+ ++ +M +G P+ +
Sbjct: 197 CHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQ 256
Query: 243 TIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESENE 302
T++ + ++ AL++ E M GC+ T N +I G CK RI++A +
Sbjct: 257 TLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIR 316
Query: 303 GFRPDQFTYNTLVNGLCKVGCAKHAMEVV------------------------------- 362
GF PD TY L+NGLCK+G A ++
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 363 -DAMLLGGFDPDTYTYNSLISGLCKLGEIDEAAKILDHMVSRDCSPNAVTYNTIISSLCK 422
D + G PD TYNSLI G K G + A ++L M ++ C PN +Y ++ CK
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 423 TKRVEEATEIACFLSRKGVLPDVCTFNFLIQGLCLSNNHRNAMELFEEMKGKGSQPDELT 482
+++EA + +S G+ P+ FN LI C + A+E+F EM KG +PD T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 483 YNMLIDSLCSSGKPEEALKLLKEMESSGCAHNVVIYNTLIDGFCKNKRIEEAEEIFDEME 542
+N LI LC + + AL LL++M S G N V YNTLI+ F + I+EA ++ +EM
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 543 LQGISRNSVTYNTLIDGLCKSRRMADAAHLMDQMIMEGLKLDKFTYNSFLTHFCKTGDIQ 602
QG + +TYN+LI GLC++ + A L ++M+ +G + N + C++G ++
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 603 KASDIVETMTLSGCNPDIVTYGTLISGLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVI 662
+A + + M L G PDIVT+ +LI+GLC+AGR++ + R +Q +G+ +N ++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 663 QALFKRNRTHEAMRLVREMLEKADPPDSLTYKIVYRGL 669
L K ++A L+ E +E P+ T+ I+ + +
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSI 714
BLAST of CmaCh03G004370 vs. TAIR 10
Match:
AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 336.7 bits (862), Expect = 5.0e-92
Identity = 211/699 (30.19%), Postives = 330/699 (47.21%), Query Frame = 0
Query: 60 PDFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRCV 119
P PK + ++ Q+D + AL +FN K+ F + S Y+ ++ KLG G FE M V
Sbjct: 3 PPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEV 62
Query: 120 LEEMK-LIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVL 179
L +M+ +G + G+++ +K+Y + E + + + M D Y +P YN +++VL
Sbjct: 63 LVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVL 122
Query: 180 VDGSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 239
VD + M R I D+ +F I +K+ CK + A+ ++ M S G +
Sbjct: 123 VDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNV 182
Query: 240 TTFTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQE 299
+ T++ GF EE + M+ G T N L+ CK+G + + + +
Sbjct: 183 VAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDK 242
Query: 300 SENEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGE 359
G P+ FTYN + GLC+ G A+ +V ++ G PD TYN+LI GLCK +
Sbjct: 243 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSK 302
Query: 360 IDEAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNF 419
EA L MV+ P++ TYNT+I+ CK V+ A I G +PD T+
Sbjct: 303 FQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 362
Query: 420 LIQGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSG 479
LI GLC A+ LF E GKG +P+ + YN LI L + G EA +L EM G
Sbjct: 363 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 422
Query: 480 CAHNVVIYNTLIDGFCK-----------------------------------NKRIEEAE 539
V +N L++G CK ++E A
Sbjct: 423 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 482
Query: 540 EIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHLMDQMIMEGLKLDKFTYNSFLTHF 599
EI D M G+ + TYN+L++GLCK+ + D M+ +G + FT+N L
Sbjct: 483 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 542
Query: 600 CKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCKAGRLQVASRLLRSIQ--MKGMVL 659
C+ + +A ++E M NPD VT+GTLI G CK G L A L R ++ K
Sbjct: 543 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSS 602
Query: 660 TPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPPDSLTYKIVYRGLCNGGGSIGEAVDF 719
TP YN +I A ++ A +L +EM+++ PD TY+++ G C G++ F
Sbjct: 603 TP-TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK-TGNVNLGYKF 662
Query: 720 TIEIIEKGNIPEFSSFVMLAEGLCSLAMEDTLVKLVDMI 721
+E++E G IP ++ + LC +ED + + +I
Sbjct: 663 LLEMMENGFIPSLTTLGRVINCLC---VEDRVYEAAGII 695
BLAST of CmaCh03G004370 vs. TAIR 10
Match:
AT3G09060.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 320.9 bits (821), Expect = 2.9e-87
Identity = 189/659 (28.68%), Postives = 332/659 (50.38%), Query Frame = 0
Query: 59 PPDFTPKQLIETLRRQRDEVAALRVFNWASKQPNFVPSSSFYKEILRKLGKAGSFEYMRC 118
P +PK +++ L+ +++ AA +F+ A++ P + S+ Y ILR+L + ++
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSR 64
Query: 119 VLEEMKLIGCEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVL 178
++E ++ C+ D + L +K+Y K + D+ + + K M + + +P YN LLN
Sbjct: 65 IVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF 124
Query: 179 VDGSKLKLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDE 238
V+ + VES + + ++ T+N+LIK CK + A ++ M G PD
Sbjct: 125 VEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDV 184
Query: 239 TTFTTIMQGFIEEGNLDGALRIKEHMVEYGCLCTDIT-VNVLINGFCKQGRIDQALSFIQ 298
+++T++ + G LD AL + + M E G + D+T N+LI+GF K+ A+
Sbjct: 185 FSYSTVINDLAKAGKLDDALELFDEMSERG-VAPDVTCYNILIDGFLKEKDHKTAMELWD 244
Query: 299 E-SENEGFRPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKL 358
E+ P+ T+N +++GL K G +++ + M + D YTY+SLI GLC
Sbjct: 245 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDA 304
Query: 359 GEIDEAAKILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTF 418
G +D+A + + + R S + VTYNT++ C+ +++E+ E+ + K + ++ ++
Sbjct: 305 GNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSY 364
Query: 419 NFLIQGLCLSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMES 478
N LI+GL + A ++ M KG D+ TY + I LC +G +AL +++E+ES
Sbjct: 365 NILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 424
Query: 479 SGCAHNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMAD 538
SG +V Y ++ID CK KR+EEA + EM G+ NS N LI GL + R+ +
Sbjct: 425 SGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE 484
Query: 539 AAHLMDQMIMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLIS 598
A+ + +M G + +YN + CK G +AS V+ M +G PD+ TY L+
Sbjct: 485 ASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLC 544
Query: 599 GLCKAGRLQVASRLLRSIQMKGMVLTPQAYNPVIQALFKRNRTHEAMRLVREMLEKADPP 658
GLC+ ++ +A L G+ +N +I L + +AM ++ M +
Sbjct: 545 GLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTA 604
Query: 659 DSLTYKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLC-----SLAME 711
+ +TY + G G S A + + G P+ S+ + +GLC S AME
Sbjct: 605 NLVTYNTLMEGFFKVGDS-NRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAME 660
BLAST of CmaCh03G004370 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 312.8 bits (800), Expect = 7.8e-85
Identity = 206/745 (27.65%), Postives = 349/745 (46.85%), Query Frame = 0
Query: 25 ISNSSIFFSASVSDHLASTSSSNSVSCSP-NVHHLPPDFTPKQLIE-TLRRQRDEVAALR 84
I S F++S SD L + + + P +HHL +FTP+ L+ Q D+ L+
Sbjct: 8 IRRSLSTFASSPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILK 67
Query: 85 VFNWASKQPNF-----------VPSSSFYK--EILRK--LGKAGSFEYMRCVLEEMKLIG 144
NWA+ F + YK +IL + K EY V + ++
Sbjct: 68 FLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETY 127
Query: 145 --CEVDRGIFLIFVKSYAKFELYDEVMGIVKEMEDEYRIKPDTCFYNVLLNVLVDGSK-L 204
C +F + VKSY++ L D+ + IV + + P YN +L+ + + +
Sbjct: 128 DLCYSTSSVFDLVVKSYSRLSLIDKALSIV-HLAQAHGFMPGVLSYNAVLDATIRSKRNI 187
Query: 205 KLVESAHSSMVRRRIRHDISTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTI 264
E+ M+ ++ ++ T+NILI+ C A
Sbjct: 188 SFAENVFKEMLESQVSPNVFTYNILIRGFCFA---------------------------- 247
Query: 265 MQGFIEEGNLDGALRIKEHMVEYGCLCTDITVNVLINGFCKQGRIDQALSFIQESENEGF 324
GN+D AL + + M GCL +T N LI+G+CK +ID ++ +G
Sbjct: 248 -------GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGL 307
Query: 325 RPDQFTYNTLVNGLCKVGCAKHAMEVVDAMLLGGFDPDTYTYNSLISGLCKLGEIDEAAK 384
P+ +YN ++NGLC+ G K V+ M G+ D TYN+LI G CK G +A
Sbjct: 308 EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALV 367
Query: 385 ILDHMVSRDCSPNAVTYNTIISSLCKTKRVEEATEIACFLSRKGVLPDVCTFNFLIQGLC 444
+ M+ +P+ +TY ++I S+CK + A E + +G+ P+ T+ L+ G
Sbjct: 368 MHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 427
Query: 445 LSNNHRNAMELFEEMKGKGSQPDELTYNMLIDSLCSSGKPEEALKLLKEMESSGCAHNVV 504
A + EM G P +TYN LI+ C +GK E+A+ +L++M+ G + +VV
Sbjct: 428 QKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 487
Query: 505 IYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNSVTYNTLIDGLCKSRRMADAAHLMDQM 564
Y+T++ GFC++ ++EA + EM +GI +++TY++LI G C+ RR +A L ++M
Sbjct: 488 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 547
Query: 565 IMEGLKLDKFTYNSFLTHFCKTGDIQKASDIVETMTLSGCNPDIVTYGTLISGLCKAGRL 624
+ GL D+FTY + + +C GD++KA + M G PD+VTY LI+GL K R
Sbjct: 548 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 607
Query: 625 QVASRLLRSIQMKGMVLTPQAYNPVIQ-----------ALFK----RNRTHEAMRLVREM 684
+ A RLL + + V + Y+ +I+ +L K + EA ++ M
Sbjct: 608 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 667
Query: 685 LEKADPPDSLTYKIVYRGLCNGGGSIGEAVDFTIEIIEKGNIPEFSSFVMLAEGLCSLAM 735
L K PD Y I+ G C G I +A E+++ G + + + L + L
Sbjct: 668 LGKNHKPDGTAYNIMIHGHCR-AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGK 715
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LFF1 | 2.9e-286 | 62.71 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9FMF6 | 1.7e-92 | 29.78 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q9CA58 | 7.1e-91 | 30.19 | Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... | [more] |
Q9SS81 | 4.0e-86 | 28.68 | Pentatricopeptide repeat-containing protein At3g09060 OS=Arabidopsis thaliana OX... | [more] |
Q9FIX3 | 1.1e-83 | 27.65 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1IU01 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like isofor... | [more] |
A0A6J1IQ10 | 0.0e+00 | 96.34 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like isofor... | [more] |
A0A6J1GDD5 | 0.0e+00 | 93.86 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like OS=Cuc... | [more] |
A0A5A7SQ06 | 0.0e+00 | 87.21 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BHC3 | 0.0e+00 | 87.21 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Cucumis ... | [more] |
Match Name | E-value | Identity | Description | |
XP_022978409.1 | 0.0e+00 | 100.00 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like isofor... | [more] |
KAG7033847.1 | 0.0e+00 | 97.52 | Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... | [more] |
XP_023544844.1 | 0.0e+00 | 96.48 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like isofor... | [more] |
XP_022978410.1 | 0.0e+00 | 96.34 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like isofor... | [more] |
XP_022949902.1 | 0.0e+00 | 93.86 | pentatricopeptide repeat-containing protein At3g53700, chloroplastic-like [Cucur... | [more] |
Match Name | E-value | Identity | Description | |
AT3G53700.1 | 2.1e-287 | 62.71 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G64320.1 | 1.2e-93 | 29.78 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G74580.1 | 5.0e-92 | 30.19 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G09060.1 | 2.9e-87 | 28.68 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 7.8e-85 | 27.65 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |