CmaCh03G002810 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G002810
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr03: 3761793 .. 3764817 (-)
RNA-Seq ExpressionCmaCh03G002810
SyntenyCmaCh03G002810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTCTGTTGTATAACACGAGATCTTGGATTGAAAATAGTACAAAACGTTATTATTGATATGATCATTGTTGAAGTCTGTATATCCACTTCATAGTTATGAGTAGCAACACTAAGCTAAATGAACTTCACTTGTGTTTTCATAAGTACTAGGAGGCCGATGAGTTGGGCTCCTCTTAGCGTTCTATTTGGCCACTTCCCCCATAAGTATTTATAGATTTGAGTAAAAGAATGACCTAATACATACAAGGAAATAAACCAACACTCCCATTGCTTGACTCTGTTTTCTAAGTTTCTTAGAAGTTATGTATGTTTGATTTGTAGGTTTATTTGTCTCGAGTCATGGATTTCTAATGTACTGACTTCTATGAACTATACGTTTTTTTTTTTGTATGCTCGAATCGTTCTACTAGACTAAATGTCTTGTTTTAATTCATAGATTTTAATTTTTTTTCTAATCATATACGATCAAGAATTTGAAAATTTATCGAATCCTCAATACCCATCTTTGTCCATTCAAATATGTCTCGCTTCCTAAATTTATCTCTCTCCCACCAATGTTCCTAGGTTTTCGAAGATATTTCATGAAAGAATATGAATATCTTCTAGCGTACTACATGGATAAGTCGATATCAACATTAAGCTTCCTAGTTAGAGTATTTTCATGAATATGAAAATCTTCTAGTGTACTACATGGATAAGTTGATATCAACATTAAGCTTCCTAGTTAGAGTATTTTGTACTTTTAGGGACTTTTGGCATTTATGTTAGATATCTTAAGTTTAGATTGAAGATTTAGGAAGTGTTATGTATCTGAGTTTGAAGTAGAGATGGGCAGTGTGGAGATGGGGAAGCCTTACTCGACCCGTCCCCACCACCTATTTAATCCTCCATTCTTGCAAAATTCTTCAAGAGATTATTTGTGGATAATTTTTTCTCATATATATATATATATATATTGAAAATATATCTATATTAAGTGAAGGGGCGGGGACAGGAACTAGAATCTCGTCTCCAAACCCATTATCTAATAGGGAAAAATGTTTCCCCCTCTCTATCTCATTCTCTGTCTAATTGTAGAGGGGATTTCTTGTTTAGCGCGAGTCTTTGTCGGTAAAATGGACATCTTTTAGTTTACGATGTCTATTCATGTAATTTGAGTTTTTAAAGAGAGAAAATGAAAAAAAAAATGTAGGTCCTACTAAATTATAACAAATAAGTAGAAATTTATTGTTTAGATGATTACCCCGGGTTTTACTAAACCCATGCTCGGGCCAAATGACACCTTTGAAATAGCCAAATTTGAGAAAATAATTACCAAAACTACCCTTGGATTTTCTTAGATTTTAGTTGGATATATAATACAACAATAGTCAATGAACCCTTTTGTTGCCCTTTCCCATATCTTCTCAAAAGATAATAATAATAATAATAATCATAATTAAATGATTATGAAATTAGAGTAAAGCGATTATATAGAAGACTTTTAGGCATCCTCTTGATTATTCCTATTATAATATAATTAAAGAATGTTCAAATTTTCCTCCCACGTGCAAGACAACCTCTTTACGAGCTTCAATTGTCCCCCACGCGCCTTCTCACCAAGAAGAATTATTTAACAAACAATTATTTTTACCCAAATCATTTTATCATTTTTTTTTTCGTTTATTTAAATAAAATAATGGTAGACGTTGATAAAAATAATATATTTGAATTTTATATTTTGCTTAAAAATATATATTTAAATTTTTAATATTTTGATTTGGTCGTTATTTTTTAAATAAATCTAAATACGTGTTCGCATACCTTAAAAAAACACGTTATTCATCTATTAAATAATTTGTATTAAATTAAATACAAATAAATAAATTATAGTTTTTTGGTATATATAGTTTTCAAATGAGTATATATAGTTTTTTGGTCAAATATTTATTTACTAGTACTAACCTGACTTTAGGAGCGATTATGTTCATATTTTTAAAATAAAATAATATTAACGTAAATAATAATAAGGCTAAATTAATAAAAAAAAATAACATTTGAATATTTTTTAACTAAAAAAATTAAAAAACATTCTTAATGTAAACCATTAATATTTTATTTTAAAAATAATTTTAATGGTTAGAAGGGTAATAAATATTAAATTTTCAAAAATTTCATTAATACCAAACTTTAAAAAATATTCTTACGGTACCATATTTAAAAAATTCAGAAATATCTATAAGGATGGATAGATTATTATTATTATTATTATTATTATTTTATTATTTTATTTTTTAAAGTAAATGATATTTTTAAAATTTAATGATTGGTCTAATATTAACTATTATTATTATTATTATTATTATTTAGCTTTTAAAAAAATTTAAGCATGTTAAATGAATTTTTTTAAAGTTAAAATATATATTTGAAATATTTTGAAAGTTTAAATGGTATTTTTGATAGATGTAATTTTTTGTTTAAAAATAATTTAAAGTATTATCAGCATATTTGATAATAACAATTTAATAATAATACAAAACAAAGTTTTAATAATAATTTTAAAATGATGAATTTTAATGATTGGTTTGATAAGCCCACTCTCGAAAGAGCGCGTGGAGTTTACATCATCGTCGAGATACAGAAAAGTCAACAACAACCTCTGCGCTGGTTCAACTTCACAGAGAGAAGAGAGAGAGAGAGAGAATCGGCGATGGTGTTGCTGTCAATGGGTGGGCTCTAATGTGAAGCAAAAGCAAAAAAATATTAGTAAATTGGAAGCGCCAACGAAACCTCCACAATGTCGCTTTCCCCTTTCATCCGATGCCCCCATTTTCAAACTCACTTTCCTTTTCTACTGCCCATCCTTCTTACTTGCTCTAACCTTCAATCTCCTACAGGTCTCAATTCTATGAGTTTTTTTTCTGATTTCGATGGATTTTGTGTTGAATTTGTAGAATCTGATTGCGTATTTTTCTTTGTGGCTAATGGTTTGAAATTGGTAGGAATTCGTTTCTTTGCTTGTGATGCTGTTTGGAAGCTAA

mRNA sequence

ATGTTCTTCTGTTGTATAACACGAGATCTTGGATTGAAAATAGTACAAAACGTTATTATTGATATGATCATTGTTGAACAAAAGCAAAAAAATATTAGTAAATTGGAAGCGCCAACGAAACCTCCACAATGTCGCTTTCCCCTTTCATCCGATGCCCCCATTTTCAAACTCACTTTCCTTTTCTACTGCCCATCCTTCTTACTTGCTCTAACCTTCAATCTCCTACAGGAATTCGTTTCTTTGCTTGTGATGCTGTTTGGAAGCTAA

Coding sequence (CDS)

ATGTTCTTCTGTTGTATAACACGAGATCTTGGATTGAAAATAGTACAAAACGTTATTATTGATATGATCATTGTTGAACAAAAGCAAAAAAATATTAGTAAATTGGAAGCGCCAACGAAACCTCCACAATGTCGCTTTCCCCTTTCATCCGATGCCCCCATTTTCAAACTCACTTTCCTTTTCTACTGCCCATCCTTCTTACTTGCTCTAACCTTCAATCTCCTACAGGAATTCGTTTCTTTGCTTGTGATGCTGTTTGGAAGCTAA

Protein sequence

MFFCCITRDLGLKIVQNVIIDMIIVEQKQKNISKLEAPTKPPQCRFPLSSDAPIFKLTFLFYCPSFLLALTFNLLQEFVSLLVMLFGS
Homology
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BLAST of CmaCh03G002810 vs. NCBI nr
Match: KAG6603523.1 (putative acetyltransferase TAP2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107.5 bits (267), Expect = 6.1e-20
Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 34  KLEAPTKPPQCRFPLSSDAPIFKLTFLFYCPSFLLALTFNLLQEFVSLLVMLFGS 89
           KLEAPTKPPQCR+PLSSDAPIFKLTFLFYCPSFLLALTFNLLQEFVSLLVMLFGS
Sbjct: 270 KLEAPTKPPQCRYPLSSDAPIFKLTFLFYCPSFLLALTFNLLQEFVSLLVMLFGS 324

The following BLAST results are available for this feature:
BLAST of CmaCh03G002810 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G002810 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G002810 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6603523.16.1e-2098.18putative acetyltransferase TAP2, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of CmaCh03G002810 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G002810.1CmaCh03G002810.1mRNA