CmaCh03G001950 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGGTATTCATATTATAAATCTTACTAGAACTGCTCGTTTTTTATCAGAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGGGCTGCAACAAGGGCTCGGTGTCATTATGTTAATAANAGGAAGTGGGGGGAGAAATGACAAGAAGATATTGGAACATCCATTTGGAAGAGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAATGTAAAGGTATTCATATTATGAATCTTACTAGAACTGCTCGTTTTTTATCATAAGCTTGTGATTTAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTGTTAATTGTTGGTACCAAAAATAAAGCAGCAGATTCAGTAGCCCGGGCTGCAACAAGAGCTCGGTGTCATTAT ATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGGGCTGCAACAAGGGCTCGGTGTCATTATGAAGTGGGGGGAGAAATGACAAGAAGATATTGGAACATCCATTTGGAAGAGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAATGTAAAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTGTTAATTGTTGGTACCAAAAATAAAGCAGCAGATTCAGTAGCCCGGGCTGCAACAAGAGCTCGGTGTCATTAT ATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAACGTAAAGCAAGTAGGGGCAAACAATTCTTAATTGTTGGTACCAAAAATAAAGCAGCGGATTCAGTAGCCCGGGCTGCAACAAGGGCTCGGTGTCATTATGAAGTGGGGGGAGAAATGACAAGAAGATATTGGAACATCCATTTGGAAGAGATGATGGAAGCAGGAGTTCATTTTGGTCATGGTACTAGGAAATGGAATCCTAGAATGGCACCTTATATCTCTGCAAAATGTAAAGTTTTTGATGCAGCAAGTAGGGGCAAACAATTGTTAATTGTTGGTACCAAAAATAAAGCAGCAGATTCAGTAGCCCGGGCTGCAACAAGAGCTCGGTGTCATTAT MMEAGVHFGHGTRKWNPRMAPYISAKRKASRGKQFLIVGTKNKAADSVARAATRARCHYEVGGEMTRRYWNIHLEEMMEAGVHFGHGTRKWNPRMAPYISAKCKVFDAASRGKQLLIVGTKNKAADSVARAATRARCHY Homology
BLAST of CmaCh03G001950 vs. ExPASy Swiss-Prot
Match: Q4VZP4 (30S ribosomal protein S2, chloroplastic OS=Cucumis sativus OX=3659 GN=rps2 PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.3e-32 Identity = 71/95 (74.74%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of CmaCh03G001950 vs. ExPASy Swiss-Prot
Match: P08242 (30S ribosomal protein S2, chloroplastic OS=Spinacia oleracea OX=3562 GN=rps2 PE=1 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.3e-32 Identity = 70/95 (73.68%), Postives = 73/95 (76.84%), Query Frame = 0
BLAST of CmaCh03G001950 vs. ExPASy Swiss-Prot
Match: Q49L09 (30S ribosomal protein S2, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=rps2 PE=3 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 1.1e-31 Identity = 71/95 (74.74%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of CmaCh03G001950 vs. ExPASy Swiss-Prot
Match: Q0ZJ31 (30S ribosomal protein S2, chloroplastic OS=Vitis vinifera OX=29760 GN=rps2 PE=3 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 2.6e-31 Identity = 70/95 (73.68%), Postives = 72/95 (75.79%), Query Frame = 0
BLAST of CmaCh03G001950 vs. ExPASy Swiss-Prot
Match: Q09MI9 (30S ribosomal protein S2, chloroplastic OS=Citrus sinensis OX=2711 GN=rps2 PE=3 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 4.4e-31 Identity = 69/95 (72.63%), Postives = 70/95 (73.68%), Query Frame = 0
BLAST of CmaCh03G001950 vs. ExPASy TrEMBL
Match: A0A445EQC5 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A01g002250 PE=3 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32 Identity = 89/164 (54.27%), Postives = 95/164 (57.93%), Query Frame = 0
BLAST of CmaCh03G001950 vs. ExPASy TrEMBL
Match: A0A6M3W1W6 (30S ribosomal protein S2, chloroplastic OS=Cucumis melo OX=3656 GN=rps2 PE=3 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 5.4e-32 Identity = 75/100 (75.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of CmaCh03G001950 vs. ExPASy TrEMBL
Match: A0A5H2XMN2 (Uncharacterized protein OS=Prunus dulcis OX=3755 GN=Prudu_897S000100 PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 9.1e-32 Identity = 73/83 (87.95%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of CmaCh03G001950 vs. ExPASy TrEMBL
Match: A0A7D0H320 (30S ribosomal protein S2, chloroplastic OS=Zanthoxylum armatum OX=67938 GN=rps2 PE=3 SV=1) HSP 1 Score: 144.8 bits (364), Expect = 2.7e-31 Identity = 73/98 (74.49%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of CmaCh03G001950 vs. ExPASy TrEMBL
Match: A0A649X5V8 (30S ribosomal protein S2, chloroplastic OS=Suaeda salsa OX=126914 GN=rps2 PE=3 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 4.5e-31 Identity = 72/97 (74.23%), Postives = 75/97 (77.32%), Query Frame = 0
BLAST of CmaCh03G001950 vs. NCBI nr
Match: RYR77684.1 (hypothetical protein Ahy_A01g002250 [Arachis hypogaea]) HSP 1 Score: 149.4 bits (376), Expect = 2.2e-32 Identity = 89/164 (54.27%), Postives = 95/164 (57.93%), Query Frame = 0
BLAST of CmaCh03G001950 vs. NCBI nr
Match: QJF46372.1 (ribosomal protein S2 [Cucumis melo]) HSP 1 Score: 147.1 bits (370), Expect = 1.1e-31 Identity = 75/100 (75.00%), Postives = 76/100 (76.00%), Query Frame = 0
BLAST of CmaCh03G001950 vs. NCBI nr
Match: BBN69347.1 (hypothetical protein Prudu_897S000100 [Prunus dulcis]) HSP 1 Score: 146.4 bits (368), Expect = 1.9e-31 Identity = 73/83 (87.95%), Postives = 76/83 (91.57%), Query Frame = 0
BLAST of CmaCh03G001950 vs. NCBI nr
Match: YP_009917068.1 (ribosomal protein S2 [Zanthoxylum armatum] >QDP70387.1 ribosomal protein S2 [Zanthoxylum armatum]) HSP 1 Score: 144.8 bits (364), Expect = 5.5e-31 Identity = 73/98 (74.49%), Postives = 74/98 (75.51%), Query Frame = 0
BLAST of CmaCh03G001950 vs. NCBI nr
Match: YP_010034235.1 (ribosomal protein S2 [Syzygium nervosum] >QOW83837.1 ribosomal protein S2 [Syzygium nervosum]) HSP 1 Score: 144.1 bits (362), Expect = 9.4e-31 Identity = 74/98 (75.51%), Postives = 75/98 (76.53%), Query Frame = 0
BLAST of CmaCh03G001950 vs. TAIR 10
Match: ATCG00160.1 (ribosomal protein S2 ) HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30 Identity = 67/95 (70.53%), Postives = 69/95 (72.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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