Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTTTATGGCATTTGAATGCCAGAAGTCTGCCGGGTTTTGTAAGGATTCAAGAGTTATTGTGAAAAATTCTTGTGAGAAACCAACGGGTGGATCGAGTTATTTCAAGCTCAAAGGAAAATCAGCGGGAATTGAATCTGAGAAATCGGAATTTGACTTGGAGAAGGGAGATACTACTTCACTCAGCTCGAAGCAGTTAGGCTGTAGAAATGTTCCCTTGGGTTGTCGGTCAATTACCGACCTTCCTCCTGCAATTATATCTGAGATTCTGAACTGCCTTGATCCGAAGGAGCTTGGCATTGTATCTTGTGTGTCGACGATTCTTCATAGGTTAGCATCTGAGCACCATGTATGGAAGGAATTCTACAATGAAAGATGGGGACTTCCAATTCCAGCTCTACCGGCACCGGTGGCTGCTACTGGATTTTCTGATGAGAAGTCATGGAAAGATATTTTTGTGGAGAGGGAGTTTAGGAGTAAAACTTTTATGGGACGATATAGTATGGAGGTTTTGCATGGTCACACTGAAGCAGTTCGTACGGTTTTTCTTCTGGTTTCTGCAAAACTTATATTTACTTCTGGATATGACTCAATTGTGAGAATCTGGGACTTGGAAGAAGGATTGTCCATTGCTTCATCACGATCACTCGGTTGCACCGTTCGTGCACTTGCGGCCGATACAAAACTACTGGTTGCTGGAGGCACCGATGGTTTTATCCATTGTTGGAAGGCGATAGAAGGGCTTCCACACTTGTTCGATGTGAAAGGCCCTCAAAATCACAATACCGAGTTTCGGCTTTGGGAGCATGAAGGACCCATAACCACTCTTGCTCTGGACCTAACAAGGATTTATAGTGGTTCTTGGGACATGACTGTTCGAGTATGGGATCGTTTTTCACAGAAGTGCTTAAGGATTTTGAGGCATGGTGACTGGGTTTGGGGACTAGTCCCTCATGATACTACTATTGCTAGCACATCAGGCTCAGATGTATATGTCTGGGATACTAACAGTGGGGAGTTGGCTACTGTCATCCATGATGCTCATGTTGGCAAGGCTTATGCTCTGTCACGAAGCCATACAGGGGATTTCCTATTTACTGGAGGGGAAGACGGTGCAATTCACATGTTTGACGTTACTAATCGACATGTTGATACAAGCGCTCAACTTGTTGGATCATGGATTCCTCATTCAGGACCAGTTTATTCACTAGCATTTGAGTTTCCATGGCTGGTTTCAGCGTCAAGTGATGGGAAACTCTCGTTGATCGACGTGAGAGCACTGCTTAGGACAAGGAAAAGAACTCTGTGGAAGAGAGATTCTGCAGGGCAGCATGTTGGTAGGAGTATTGGTGTGGAGCCTCCTCAGAGAATGTTGCATGGATTTGGGAGCAATTTGTTCGGTGTGGACATTGGTTTGGATCGTATTGTTTGTGGAGGAGAGGAAGGTGTTGTGAGGATCTGGAACTTCTCGCAGGCTCTGGAAACCGAACGGAGGGCTCGTGCACTAAGAGGGATTAGGTTAGAGAATAGAATGAGACGGCGTAGGCTTCAAATAGAAATGAACACAAAAGGTGGTGGTGGTGGTCCTGGTGGTGGTGGTGGTGGTGGTCGTGGTCGGAGTGATCGGTGCTCGGTTGCAGCAAAGAAAAAACTAATGAACAGCGATAATGTTAGTGTTTGGCACAACAAACGCGGGGTGAGCGGGAAGCTCAAAGCTTAG
mRNA sequence
ATGTATTTTATGGCATTTGAATGCCAGAAGTCTGCCGGGTTTTGTAAGGATTCAAGAGTTATTGTGAAAAATTCTTGTGAGAAACCAACGGGTGGATCGAGTTATTTCAAGCTCAAAGGAAAATCAGCGGGAATTGAATCTGAGAAATCGGAATTTGACTTGGAGAAGGGAGATACTACTTCACTCAGCTCGAAGCAGTTAGGCTGTAGAAATGTTCCCTTGGGTTGTCGGTCAATTACCGACCTTCCTCCTGCAATTATATCTGAGATTCTGAACTGCCTTGATCCGAAGGAGCTTGGCATTGTATCTTGTGTGTCGACGATTCTTCATAGGTTAGCATCTGAGCACCATGTATGGAAGGAATTCTACAATGAAAGATGGGGACTTCCAATTCCAGCTCTACCGGCACCGGTGGCTGCTACTGGATTTTCTGATGAGAAGTCATGGAAAGATATTTTTGTGGAGAGGGAGTTTAGGAGTAAAACTTTTATGGGACGATATAGTATGGAGGTTTTGCATGGTCACACTGAAGCAGTTCGTACGGTTTTTCTTCTGGTTTCTGCAAAACTTATATTTACTTCTGGATATGACTCAATTGTGAGAATCTGGGACTTGGAAGAAGGATTGTCCATTGCTTCATCACGATCACTCGGTTGCACCGTTCGTGCACTTGCGGCCGATACAAAACTACTGGTTGCTGGAGGCACCGATGGTTTTATCCATTGTTGGAAGGCGATAGAAGGGCTTCCACACTTGTTCGATGTGAAAGGCCCTCAAAATCACAATACCGAGTTTCGGCTTTGGGAGCATGAAGGACCCATAACCACTCTTGCTCTGGACCTAACAAGGATTTATAGTGGTTCTTGGGACATGACTGTTCGAGTATGGGATCGTTTTTCACAGAAGTGCTTAAGGATTTTGAGGCATGGTGACTGGGTTTGGGGACTAGTCCCTCATGATACTACTATTGCTAGCACATCAGGCTCAGATGTATATGTCTGGGATACTAACAGTGGGGAGTTGGCTACTGTCATCCATGATGCTCATGTTGGCAAGGCTTATGCTCTGTCACGAAGCCATACAGGGGATTTCCTATTTACTGGAGGGGAAGACGGTGCAATTCACATGTTTGACGTTACTAATCGACATGTTGATACAAGCGCTCAACTTGTTGGATCATGGATTCCTCATTCAGGACCAGTTTATTCACTAGCATTTGAGTTTCCATGGCTGGTTTCAGCGTCAAGTGATGGGAAACTCTCGTTGATCGACGTGAGAGCACTGCTTAGGACAAGGAAAAGAACTCTGTGGAAGAGAGATTCTGCAGGGCAGCATGTTGGTAGGAGTATTGGTGTGGAGCCTCCTCAGAGAATGTTGCATGGATTTGGGAGCAATTTGTTCGGTGTGGACATTGGTTTGGATCGTATTGTTTGTGGAGGAGAGGAAGGTGTTGTGAGGATCTGGAACTTCTCGCAGGCTCTGGAAACCGAACGGAGGGCTCGTGCACTAAGAGGGATTAGGTTAGAGAATAGAATGAGACGGCGTAGGCTTCAAATAGAAATGAACACAAAAGGTGGTGGTGGTGGTCCTGGTGGTGGTGGTGGTGGTGGTCGTGGTCGGAGTGATCGGTGCTCGGTTGCAGCAAAGAAAAAACTAATGAACAGCGATAATGTTAGTGTTTGGCACAACAAACGCGGGGTGAGCGGGAAGCTCAAAGCTTAG
Coding sequence (CDS)
ATGTATTTTATGGCATTTGAATGCCAGAAGTCTGCCGGGTTTTGTAAGGATTCAAGAGTTATTGTGAAAAATTCTTGTGAGAAACCAACGGGTGGATCGAGTTATTTCAAGCTCAAAGGAAAATCAGCGGGAATTGAATCTGAGAAATCGGAATTTGACTTGGAGAAGGGAGATACTACTTCACTCAGCTCGAAGCAGTTAGGCTGTAGAAATGTTCCCTTGGGTTGTCGGTCAATTACCGACCTTCCTCCTGCAATTATATCTGAGATTCTGAACTGCCTTGATCCGAAGGAGCTTGGCATTGTATCTTGTGTGTCGACGATTCTTCATAGGTTAGCATCTGAGCACCATGTATGGAAGGAATTCTACAATGAAAGATGGGGACTTCCAATTCCAGCTCTACCGGCACCGGTGGCTGCTACTGGATTTTCTGATGAGAAGTCATGGAAAGATATTTTTGTGGAGAGGGAGTTTAGGAGTAAAACTTTTATGGGACGATATAGTATGGAGGTTTTGCATGGTCACACTGAAGCAGTTCGTACGGTTTTTCTTCTGGTTTCTGCAAAACTTATATTTACTTCTGGATATGACTCAATTGTGAGAATCTGGGACTTGGAAGAAGGATTGTCCATTGCTTCATCACGATCACTCGGTTGCACCGTTCGTGCACTTGCGGCCGATACAAAACTACTGGTTGCTGGAGGCACCGATGGTTTTATCCATTGTTGGAAGGCGATAGAAGGGCTTCCACACTTGTTCGATGTGAAAGGCCCTCAAAATCACAATACCGAGTTTCGGCTTTGGGAGCATGAAGGACCCATAACCACTCTTGCTCTGGACCTAACAAGGATTTATAGTGGTTCTTGGGACATGACTGTTCGAGTATGGGATCGTTTTTCACAGAAGTGCTTAAGGATTTTGAGGCATGGTGACTGGGTTTGGGGACTAGTCCCTCATGATACTACTATTGCTAGCACATCAGGCTCAGATGTATATGTCTGGGATACTAACAGTGGGGAGTTGGCTACTGTCATCCATGATGCTCATGTTGGCAAGGCTTATGCTCTGTCACGAAGCCATACAGGGGATTTCCTATTTACTGGAGGGGAAGACGGTGCAATTCACATGTTTGACGTTACTAATCGACATGTTGATACAAGCGCTCAACTTGTTGGATCATGGATTCCTCATTCAGGACCAGTTTATTCACTAGCATTTGAGTTTCCATGGCTGGTTTCAGCGTCAAGTGATGGGAAACTCTCGTTGATCGACGTGAGAGCACTGCTTAGGACAAGGAAAAGAACTCTGTGGAAGAGAGATTCTGCAGGGCAGCATGTTGGTAGGAGTATTGGTGTGGAGCCTCCTCAGAGAATGTTGCATGGATTTGGGAGCAATTTGTTCGGTGTGGACATTGGTTTGGATCGTATTGTTTGTGGAGGAGAGGAAGGTGTTGTGAGGATCTGGAACTTCTCGCAGGCTCTGGAAACCGAACGGAGGGCTCGTGCACTAAGAGGGATTAGGTTAGAGAATAGAATGAGACGGCGTAGGCTTCAAATAGAAATGAACACAAAAGGTGGTGGTGGTGGTCCTGGTGGTGGTGGTGGTGGTGGTCGTGGTCGGAGTGATCGGTGCTCGGTTGCAGCAAAGAAAAAACTAATGAACAGCGATAATGTTAGTGTTTGGCACAACAAACGCGGGGTGAGCGGGAAGCTCAAAGCTTAG
Protein sequence
MYFMAFECQKSAGFCKDSRVIVKNSCEKPTGGSSYFKLKGKSAGIESEKSEFDLEKGDTTSLSSKQLGCRNVPLGCRSITDLPPAIISEILNCLDPKELGIVSCVSTILHRLASEHHVWKEFYNERWGLPIPALPAPVAATGFSDEKSWKDIFVEREFRSKTFMGRYSMEVLHGHTEAVRTVFLLVSAKLIFTSGYDSIVRIWDLEEGLSIASSRSLGCTVRALAADTKLLVAGGTDGFIHCWKAIEGLPHLFDVKGPQNHNTEFRLWEHEGPITTLALDLTRIYSGSWDMTVRVWDRFSQKCLRILRHGDWVWGLVPHDTTIASTSGSDVYVWDTNSGELATVIHDAHVGKAYALSRSHTGDFLFTGGEDGAIHMFDVTNRHVDTSAQLVGSWIPHSGPVYSLAFEFPWLVSASSDGKLSLIDVRALLRTRKRTLWKRDSAGQHVGRSIGVEPPQRMLHGFGSNLFGVDIGLDRIVCGGEEGVVRIWNFSQALETERRARALRGIRLENRMRRRRLQIEMNTKGGGGGPGGGGGGGRGRSDRCSVAAKKKLMNSDNVSVWHNKRGVSGKLKA
Homology
BLAST of CmaCh02G011830 vs. ExPASy Swiss-Prot
Match:
Q94AD8 (F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis thaliana OX=3702 GN=At5g21040 PE=2 SV=1)
HSP 1 Score: 706.8 bits (1823), Expect = 2.0e-202
Identity = 354/570 (62.11%), Postives = 418/570 (73.33%), Query Frame = 0
Query: 4 MAFECQKSAGFCKDSRVIVKNSCEKPTGGSSYFKLKGKSAGIESEKSEFDLEKGDTTSLS 63
M FECQ+ D R E + S I + K +KG
Sbjct: 1 MEFECQERLEAANDQR------SESGLLNTDLRIGNDGSVEIPNVKLCCQKKKGTLVPSG 60
Query: 64 SKQLGCRNVPLGCRSITDLPPAIISEILNCLDPKELGIVSCVSTILHRLASEHHVWKEFY 123
SKQL + L +I DLP A+ISEILNCLDPKELG+VSCVST LHRLASEHH WKEFY
Sbjct: 61 SKQL-LSDKDLS-TTIIDLPQALISEILNCLDPKELGLVSCVSTYLHRLASEHHAWKEFY 120
Query: 124 NERWGLPIPALPAPVAATGFSDEKSWKDIFVEREFRSKTFMGRYSMEVLHGHTEAVRTVF 183
ERWGLP+ A++G SDE+SWKD+FVEREFRS+TF+GRYS++ L+GHTEAVRTVF
Sbjct: 121 RERWGLPV---VFGAASSGLSDERSWKDLFVEREFRSRTFLGRYSIDTLYGHTEAVRTVF 180
Query: 184 LLVSAKLIFTSGYDSIVRIWDLEEGLSIASSRSLGCTVRALAADTKLLVAGGTDGFIHCW 243
LL SAKL+FTSGYDSIVR+WD+EEGLSIA+S+ LGCT+RALAADTKLLVAGGTDGFIHCW
Sbjct: 181 LLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAADTKLLVAGGTDGFIHCW 240
Query: 244 KAIEGLPHLFDVKGPQNHNTEFRLWEHEGPITTLALDLTRIYSGSWDMTVRVWDRFSQKC 303
K+++GL +LFD+ G Q TEFRLW HEGPIT+LALD+T I+SGSWDM+VR+WDR S KC
Sbjct: 241 KSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLALDMTSIFSGSWDMSVRIWDRSSMKC 300
Query: 304 LRILRHGDWVWGLVPHDTTIASTSGSDVYVWDTNSGELATVIHDAHVGKAYALSRSHTGD 363
++ LRH DWVWGL PH+TT+ASTSGSDVY+WD +S +I DAH G Y+L+RSHTGD
Sbjct: 301 VKTLRHSDWVWGLAPHETTLASTSGSDVYIWDVSSETPLAIIPDAHEGTTYSLARSHTGD 360
Query: 364 FLFTGGEDGAIHMFDVTNRHVDTSAQLVGSWIPHSGPVYSLAFEFPWLVSASSDGKLSLI 423
FLFTGGEDG I MF++ +TS L+ W+PH+ PVYSL+FEFPWLVSAS DGKL+LI
Sbjct: 361 FLFTGGEDGGIKMFEIRRYGSETSVVLISQWMPHTSPVYSLSFEFPWLVSASGDGKLALI 420
Query: 424 DVRALLRTRKRTLWKRDSAGQHVGRSIGVEPPQRMLHGFGSNLFGVDIGLDRIVCGGEEG 483
DVR LL+T + KR S S VEPPQRMLHGFGSNLF VD+G DRIVCGGEEG
Sbjct: 421 DVRKLLKTNRCAYSKRIS-------SSTVEPPQRMLHGFGSNLFSVDVGYDRIVCGGEEG 480
Query: 484 VVRIWNFSQALETERRARALRGIRLENRMRRRRLQIEMNTKGGGGGPGGGGGGGRGRSDR 543
VRIWNF+QALE ERR RAL+G+R ENRMRRRR+Q+EMN K GR D+
Sbjct: 481 TVRIWNFTQALEIERRTRALKGMRHENRMRRRRMQMEMNAK-------------NGRPDQ 539
Query: 544 CSVAAKKKLMNSDNVSVWHNKRGVSGKLKA 574
CS+AA K +N + WH+KR SGK KA
Sbjct: 541 CSIAAHKNPINGERNRAWHSKRRASGKAKA 539
BLAST of CmaCh02G011830 vs. ExPASy Swiss-Prot
Match:
D4AM37 (Probable E3 ubiquitin ligase complex SCF subunit sconB OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=sconB PE=3 SV=1)
HSP 1 Score: 102.1 bits (253), Expect = 2.2e-20
Identity = 85/307 (27.69%), Postives = 127/307 (41.37%), Query Frame = 0
Query: 79 ITDLPPAIISEILNCLDPKELGIVSCVSTILHRLASEHHVWKEFYNER---------WGL 138
+T LPP I +IL+ LD L + VS LA + VW + WGL
Sbjct: 198 VTALPPEISFKILSYLDTASLCSAAQVSHSWRALADDDVVWHRMCEQHIDRKCEKCGWGL 257
Query: 139 PI--------PALPAPVAATG---------FSDEKSWKDIFVER-EFRSKTFMGRYSMEV 198
P+ + A G + WK ++++R + + GR + +
Sbjct: 258 PMLDRKRLKDTKRQVQLRAAGKEIAPNQRPQQQHRPWKAVYMDRFKVGTNWKYGRCTTTI 317
Query: 199 LHGHTEAVRTVFLLVSAKLIFTSGYDSIVRIWDLEEGLSIASSRSLGCTVRALAADTKLL 258
GHT V + L ++ T YD+ ++IWD+E G I + R T+R L D L
Sbjct: 318 FRGHTNGV--MCLQFDDNILATGSYDATIKIWDIETGKEIRTLRGHESTIRCLQFDDTKL 377
Query: 259 VAGGTDGFIHCWKAIEGLPHLFDVKGPQNHNTEFRLWEHEGPITTLALDLTRIYSGSWDM 318
++G D I W G H+G + L D T + SGS D
Sbjct: 378 ISGSLDRTIKVWNWRSG-------------ECISTYTGHQGGVLCLHFDSTTLASGSKDN 437
Query: 319 TVRVWDRFSQKCLRILR-HGDWVWGLVPHDTTIASTSGSD---VYVWDTNSGELATVIHD 353
T+++W+ F K RILR H DWV + + S SD V +WD ++G+ IH
Sbjct: 438 TIKIWN-FHDKSTRILRGHADWVNSVKLDTASRTVFSASDDLTVRIWDLDTGK---CIHS 485
BLAST of CmaCh02G011830 vs. ExPASy Swiss-Prot
Match:
C5FP68 (Probable E3 ubiquitin ligase complex SCF subunit sconB OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) OX=554155 GN=sconB PE=3 SV=1)
HSP 1 Score: 102.1 bits (253), Expect = 2.2e-20
Identity = 85/305 (27.87%), Postives = 127/305 (41.64%), Query Frame = 0
Query: 79 ITDLPPAIISEILNCLDPKELGIVSCVSTILHRLASEHHVWKEFYNER---------WGL 138
+T LPP I +IL+ LD L + VS LA + VW + WGL
Sbjct: 215 VTALPPEISFKILSYLDTASLCNAAQVSRNWRHLADDDVVWHRMCEQHIDRKCEKCGWGL 274
Query: 139 PI----------------PALPAPVAATGFSDEKSWKDIFVER-EFRSKTFMGRYSMEVL 198
P+ A V + WK ++++R + + GR + +
Sbjct: 275 PMLDRKRLKDTKRQVQLRAAGKEAVTGRQQQQHRPWKAVYMDRFKVGTNWKYGRCTTTIF 334
Query: 199 HGHTEAVRTVFLLVSAKLIFTSGYDSIVRIWDLEEGLSIASSRSLGCTVRALAADTKLLV 258
GHT V + L ++ T YD+ ++IWD+E G I + R T+R L D L+
Sbjct: 335 RGHTNGV--MCLQFDDNILATGSYDATIKIWDIETGKEIRTLRGHESTIRCLQFDDTKLI 394
Query: 259 AGGTDGFIHCWKAIEGLPHLFDVKGPQNHNTEFRLWEHEGPITTLALDLTRIYSGSWDMT 318
+G D I W G H+G + L D T + SGS D T
Sbjct: 395 SGSLDRTIKVWSWRSG-------------ECISTYTGHQGGVLCLHFDSTTLASGSKDNT 454
Query: 319 VRVWDRFSQKCLRILR-HGDWVWGLVPHDT---TIASTSGS-DVYVWDTNSGELATVIHD 353
+++W+ F K +ILR H DWV V DT T+ S S V +WD ++G+ +
Sbjct: 455 IKIWN-FQDKSTQILRGHTDWV-NAVKLDTASRTVFSASDDLTVRIWDLDTGKCIHT-YA 501
BLAST of CmaCh02G011830 vs. ExPASy Swiss-Prot
Match:
D4D8P3 (Probable E3 ubiquitin ligase complex SCF subunit sconB OS=Trichophyton verrucosum (strain HKI 0517) OX=663202 GN=sconB PE=3 SV=1)
HSP 1 Score: 102.1 bits (253), Expect = 2.2e-20
Identity = 85/307 (27.69%), Postives = 127/307 (41.37%), Query Frame = 0
Query: 79 ITDLPPAIISEILNCLDPKELGIVSCVSTILHRLASEHHVWKEFYNER---------WGL 138
+T LPP I +IL+ LD L + VS LA + VW + WGL
Sbjct: 198 VTALPPEISFKILSYLDTASLCSAAQVSHSWRALADDDVVWHRMCEQHIDRKCEKCGWGL 257
Query: 139 PI--------PALPAPVAATG---------FSDEKSWKDIFVER-EFRSKTFMGRYSMEV 198
P+ + A G + WK ++++R + + GR + +
Sbjct: 258 PMLDRKRLKDTKRQVQLRAAGKEIAPNQRPQQQHRPWKAVYMDRFKVGTNWKYGRCTTTI 317
Query: 199 LHGHTEAVRTVFLLVSAKLIFTSGYDSIVRIWDLEEGLSIASSRSLGCTVRALAADTKLL 258
GHT V + L ++ T YD+ ++IWD+E G I + R T+R L D L
Sbjct: 318 FRGHTNGV--MCLQFDDNILATGSYDATIKIWDIETGKEIRTLRGHESTIRCLQFDDTKL 377
Query: 259 VAGGTDGFIHCWKAIEGLPHLFDVKGPQNHNTEFRLWEHEGPITTLALDLTRIYSGSWDM 318
++G D I W G H+G + L D T + SGS D
Sbjct: 378 ISGSLDRTIKVWNWRSG-------------ECISTYTGHQGGVLCLHFDSTTLASGSKDN 437
Query: 319 TVRVWDRFSQKCLRILR-HGDWVWGLVPHDTTIASTSGSD---VYVWDTNSGELATVIHD 353
T+++W+ F K RILR H DWV + + S SD V +WD ++G+ IH
Sbjct: 438 TIKIWN-FHDKSTRILRGHADWVNSVKLDTASRTVFSASDDLTVRIWDLDTGK---CIHS 485
BLAST of CmaCh02G011830 vs. ExPASy Swiss-Prot
Match:
Q8YRI1 (Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr3466 PE=4 SV=1)
HSP 1 Score: 91.3 bits (225), Expect = 3.9e-17
Identity = 73/262 (27.86%), Postives = 121/262 (46.18%), Query Frame = 0
Query: 172 LHGHTEAVRTVFLLVSAKLIFTSGYDSIVRIWDLEEGLSIASSRSLGCTVRAL--AADTK 231
L GHT VR+V ++ + G D IVR+WD+ G + + + VR L + +
Sbjct: 1070 LQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGV 1129
Query: 232 LLVAGGTDGFIHCWKAIEGLPHLFDVKGPQNHNTEFRLWEHEGPITTLALDLTRIYSGSW 291
L G +D + W I L+ ++G N W + + D + SGS
Sbjct: 1130 TLANGSSDQIVRLWD-ISSKKCLYTLQGHTN-------WVN---AVAFSPDGATLASGSG 1189
Query: 292 DMTVRVWDRFSQKCLRILR-HGDWVWGLV--PHDTTIAS-TSGSDVYVWDTNSGELATVI 351
D TVR+WD S KCL IL+ H WV +V P +T+AS +S V +W+ NS +
Sbjct: 1190 DQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTF 1249
Query: 352 HDAHVGKAYALSRSHTGDFLFTGGEDGAIHMFDVTNRHVDTSAQLVGSWIPHSGPVYSLA 411
H ++ + G L +G D + ++D+ +S++ + ++ H+ V S+A
Sbjct: 1250 -QGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDI------SSSKCLHTFQGHTNWVNSVA 1309
Query: 412 F--EFPWLVSASSDGKLSLIDV 426
F + L S S D + L ++
Sbjct: 1310 FNPDGSMLASGSGDQTVRLWEI 1313
BLAST of CmaCh02G011830 vs. TAIR 10
Match:
AT5G21040.1 (F-box protein 2 )
HSP 1 Score: 706.8 bits (1823), Expect = 1.4e-203
Identity = 354/570 (62.11%), Postives = 418/570 (73.33%), Query Frame = 0
Query: 4 MAFECQKSAGFCKDSRVIVKNSCEKPTGGSSYFKLKGKSAGIESEKSEFDLEKGDTTSLS 63
M FECQ+ D R E + S I + K +KG
Sbjct: 1 MEFECQERLEAANDQR------SESGLLNTDLRIGNDGSVEIPNVKLCCQKKKGTLVPSG 60
Query: 64 SKQLGCRNVPLGCRSITDLPPAIISEILNCLDPKELGIVSCVSTILHRLASEHHVWKEFY 123
SKQL + L +I DLP A+ISEILNCLDPKELG+VSCVST LHRLASEHH WKEFY
Sbjct: 61 SKQL-LSDKDLS-TTIIDLPQALISEILNCLDPKELGLVSCVSTYLHRLASEHHAWKEFY 120
Query: 124 NERWGLPIPALPAPVAATGFSDEKSWKDIFVEREFRSKTFMGRYSMEVLHGHTEAVRTVF 183
ERWGLP+ A++G SDE+SWKD+FVEREFRS+TF+GRYS++ L+GHTEAVRTVF
Sbjct: 121 RERWGLPV---VFGAASSGLSDERSWKDLFVEREFRSRTFLGRYSIDTLYGHTEAVRTVF 180
Query: 184 LLVSAKLIFTSGYDSIVRIWDLEEGLSIASSRSLGCTVRALAADTKLLVAGGTDGFIHCW 243
LL SAKL+FTSGYDSIVR+WD+EEGLSIA+S+ LGCT+RALAADTKLLVAGGTDGFIHCW
Sbjct: 181 LLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAADTKLLVAGGTDGFIHCW 240
Query: 244 KAIEGLPHLFDVKGPQNHNTEFRLWEHEGPITTLALDLTRIYSGSWDMTVRVWDRFSQKC 303
K+++GL +LFD+ G Q TEFRLW HEGPIT+LALD+T I+SGSWDM+VR+WDR S KC
Sbjct: 241 KSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLALDMTSIFSGSWDMSVRIWDRSSMKC 300
Query: 304 LRILRHGDWVWGLVPHDTTIASTSGSDVYVWDTNSGELATVIHDAHVGKAYALSRSHTGD 363
++ LRH DWVWGL PH+TT+ASTSGSDVY+WD +S +I DAH G Y+L+RSHTGD
Sbjct: 301 VKTLRHSDWVWGLAPHETTLASTSGSDVYIWDVSSETPLAIIPDAHEGTTYSLARSHTGD 360
Query: 364 FLFTGGEDGAIHMFDVTNRHVDTSAQLVGSWIPHSGPVYSLAFEFPWLVSASSDGKLSLI 423
FLFTGGEDG I MF++ +TS L+ W+PH+ PVYSL+FEFPWLVSAS DGKL+LI
Sbjct: 361 FLFTGGEDGGIKMFEIRRYGSETSVVLISQWMPHTSPVYSLSFEFPWLVSASGDGKLALI 420
Query: 424 DVRALLRTRKRTLWKRDSAGQHVGRSIGVEPPQRMLHGFGSNLFGVDIGLDRIVCGGEEG 483
DVR LL+T + KR S S VEPPQRMLHGFGSNLF VD+G DRIVCGGEEG
Sbjct: 421 DVRKLLKTNRCAYSKRIS-------SSTVEPPQRMLHGFGSNLFSVDVGYDRIVCGGEEG 480
Query: 484 VVRIWNFSQALETERRARALRGIRLENRMRRRRLQIEMNTKGGGGGPGGGGGGGRGRSDR 543
VRIWNF+QALE ERR RAL+G+R ENRMRRRR+Q+EMN K GR D+
Sbjct: 481 TVRIWNFTQALEIERRTRALKGMRHENRMRRRRMQMEMNAK-------------NGRPDQ 539
Query: 544 CSVAAKKKLMNSDNVSVWHNKRGVSGKLKA 574
CS+AA K +N + WH+KR SGK KA
Sbjct: 541 CSIAAHKNPINGERNRAWHSKRRASGKAKA 539
BLAST of CmaCh02G011830 vs. TAIR 10
Match:
AT5G21040.2 (F-box protein 2 )
HSP 1 Score: 706.8 bits (1823), Expect = 1.4e-203
Identity = 354/570 (62.11%), Postives = 418/570 (73.33%), Query Frame = 0
Query: 4 MAFECQKSAGFCKDSRVIVKNSCEKPTGGSSYFKLKGKSAGIESEKSEFDLEKGDTTSLS 63
M FECQ+ D R E + S I + K +KG
Sbjct: 1 MEFECQERLEAANDQR------SESGLLNTDLRIGNDGSVEIPNVKLCCQKKKGTLVPSG 60
Query: 64 SKQLGCRNVPLGCRSITDLPPAIISEILNCLDPKELGIVSCVSTILHRLASEHHVWKEFY 123
SKQL + L +I DLP A+ISEILNCLDPKELG+VSCVST LHRLASEHH WKEFY
Sbjct: 61 SKQL-LSDKDLS-TTIIDLPQALISEILNCLDPKELGLVSCVSTYLHRLASEHHAWKEFY 120
Query: 124 NERWGLPIPALPAPVAATGFSDEKSWKDIFVEREFRSKTFMGRYSMEVLHGHTEAVRTVF 183
ERWGLP+ A++G SDE+SWKD+FVEREFRS+TF+GRYS++ L+GHTEAVRTVF
Sbjct: 121 RERWGLPV---VFGAASSGLSDERSWKDLFVEREFRSRTFLGRYSIDTLYGHTEAVRTVF 180
Query: 184 LLVSAKLIFTSGYDSIVRIWDLEEGLSIASSRSLGCTVRALAADTKLLVAGGTDGFIHCW 243
LL SAKL+FTSGYDSIVR+WD+EEGLSIA+S+ LGCT+RALAADTKLLVAGGTDGFIHCW
Sbjct: 181 LLASAKLVFTSGYDSIVRMWDMEEGLSIAASKPLGCTIRALAADTKLLVAGGTDGFIHCW 240
Query: 244 KAIEGLPHLFDVKGPQNHNTEFRLWEHEGPITTLALDLTRIYSGSWDMTVRVWDRFSQKC 303
K+++GL +LFD+ G Q TEFRLW HEGPIT+LALD+T I+SGSWDM+VR+WDR S KC
Sbjct: 241 KSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLALDMTSIFSGSWDMSVRIWDRSSMKC 300
Query: 304 LRILRHGDWVWGLVPHDTTIASTSGSDVYVWDTNSGELATVIHDAHVGKAYALSRSHTGD 363
++ LRH DWVWGL PH+TT+ASTSGSDVY+WD +S +I DAH G Y+L+RSHTGD
Sbjct: 301 VKTLRHSDWVWGLAPHETTLASTSGSDVYIWDVSSETPLAIIPDAHEGTTYSLARSHTGD 360
Query: 364 FLFTGGEDGAIHMFDVTNRHVDTSAQLVGSWIPHSGPVYSLAFEFPWLVSASSDGKLSLI 423
FLFTGGEDG I MF++ +TS L+ W+PH+ PVYSL+FEFPWLVSAS DGKL+LI
Sbjct: 361 FLFTGGEDGGIKMFEIRRYGSETSVVLISQWMPHTSPVYSLSFEFPWLVSASGDGKLALI 420
Query: 424 DVRALLRTRKRTLWKRDSAGQHVGRSIGVEPPQRMLHGFGSNLFGVDIGLDRIVCGGEEG 483
DVR LL+T + KR S S VEPPQRMLHGFGSNLF VD+G DRIVCGGEEG
Sbjct: 421 DVRKLLKTNRCAYSKRIS-------SSTVEPPQRMLHGFGSNLFSVDVGYDRIVCGGEEG 480
Query: 484 VVRIWNFSQALETERRARALRGIRLENRMRRRRLQIEMNTKGGGGGPGGGGGGGRGRSDR 543
VRIWNF+QALE ERR RAL+G+R ENRMRRRR+Q+EMN K GR D+
Sbjct: 481 TVRIWNFTQALEIERRTRALKGMRHENRMRRRRMQMEMNAK-------------NGRPDQ 539
Query: 544 CSVAAKKKLMNSDNVSVWHNKRGVSGKLKA 574
CS+AA K +N + WH+KR SGK KA
Sbjct: 541 CSIAAHKNPINGERNRAWHSKRRASGKAKA 539
BLAST of CmaCh02G011830 vs. TAIR 10
Match:
AT3G51930.1 (Transducin/WD40 repeat-like superfamily protein )
HSP 1 Score: 73.9 bits (180), Expect = 4.6e-13
Identity = 89/359 (24.79%), Postives = 135/359 (37.60%), Query Frame = 0
Query: 169 MEVLHGHTEAVRTVFLLVSAKLIFTSGYDSIVRIWDLEEGLSIASSRSLGCTVRALAADT 228
+ VL H +V ++ L L + G D IV W + A +V+AL +
Sbjct: 54 LAVLSAHVGSVSSLALCGEFLLSASQGKDIIV--WQQPDLKIFAKFGQGDGSVKALVSVG 113
Query: 229 KLLVAGGTDGFIHCWKA-----------IEGLPHLFDVKGP--------QNHNTEFRLW- 288
+ D I WK ++ LP D G Q RLW
Sbjct: 114 SKVFTAHQDSRIRVWKVSRRNSENAFRLVDTLPTTKDYLGKFMKQSNYVQTRRNHKRLWI 173
Query: 289 EHEGPITTLALDLTRIYSGSWDMTVRVWDRFSQKCLRILR-HGDWVWGLVPHDTTIASTS 348
EH I+ LA+ IYSGSWD T++VW KCL ++ H D + GLV D + S S
Sbjct: 174 EHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVAGDGRVYSAS 233
Query: 349 G-SDVYVWDTNSGE----LATVIHDAHVGKAYALSR----------SHTGDFLFTGGEDG 408
V +W + ++ HV KA R S G++++ GG DG
Sbjct: 234 ADGKVKIWGKEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGGGSDG 293
Query: 409 AIHMFDVTNRHVDTSAQLVG-SWIPHSGPVYSLAFEFPWLVSASSDGKLSLIDVRALLRT 468
+ ++ + D +G H+ V + + S S+D +
Sbjct: 294 FVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMCVVGEMVCSGSADKSIG---------- 353
Query: 469 RKRTLWKRDSAGQ--HVGRSIGVEPPQRMLHGFGSNLFGVDIGLDRIVCGGEEGVVRIW 489
LW+R+ G G G E P + L +N V G + GG + +R+W
Sbjct: 354 ----LWRREVTGMLCKFGVIHGHEGPVKCLQASPNN---VGAGF-MLYSGGLDKSLRVW 392
BLAST of CmaCh02G011830 vs. TAIR 10
Match:
AT1G21651.1 (zinc ion binding )
HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12
Identity = 69/299 (23.08%), Postives = 121/299 (40.47%), Query Frame = 0
Query: 154 VEREFRSKTFMGRYSMEVLHGHTEAVRTVFLLVSAKLIFTSGYDSIVRIWDLEEGLSIAS 213
V+ +F + G+ + + GH ++V L V +F+S YD + IW L++ + +
Sbjct: 502 VDIDFPGRVSEGKVRSKDMRGHQDSV--TGLAVGGGFLFSSSYDRTILIWSLKDFSHVHT 561
Query: 214 SRSLGCTVRAL---AADTKLLVAGGTDGFIHCWKA---IEGLP----------------- 273
+ V AL + V+G G I W +E P
Sbjct: 562 FKGHQDKVMALIHIEGTEPVCVSGDGGGGIFVWSTTFPLEEQPLRKWYEPKDWRYTGIHA 621
Query: 274 -------HLFDVKGP--------QNHNTEFRLWEHEGPITTLALDLTRIYSGSWDMTVRV 333
H++ G Q+ + + H+ ++TL + +YSGSWD TVR+
Sbjct: 622 LAYSEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLYSGSWDGTVRL 681
Query: 334 WDRFSQKCLRILRHGDWVWGLV--------PHDTTIASTSGSDVYVWDTNSGELATVIHD 393
W L +L G+ G+V T +A+ D+ +W + T++
Sbjct: 682 WSLSDNSLLTVL--GEETPGIVRSILSLAADDQTLVAAYQNGDIQIWRDD-----TLMKS 741
Query: 394 AHVGKAYALSRSHTGDFLFTGGEDGAIHMFDVTNRHVDTSAQLVGSWIPHSGPVYSLAF 407
+ LS + G +LFTGG D I++ +++ + + VGS IP S + SL +
Sbjct: 742 MKIQNGAILSIAVNGKWLFTGGWDKTINVQELSGDEISVNCAHVGS-IPGSSVITSLLY 790
BLAST of CmaCh02G011830 vs. TAIR 10
Match:
AT1G21650.3 (Preprotein translocase SecA family protein )
HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12
Identity = 69/299 (23.08%), Postives = 121/299 (40.47%), Query Frame = 0
Query: 154 VEREFRSKTFMGRYSMEVLHGHTEAVRTVFLLVSAKLIFTSGYDSIVRIWDLEEGLSIAS 213
V+ +F + G+ + + GH ++V L V +F+S YD + IW L++ + +
Sbjct: 502 VDIDFPGRVSEGKVRSKDMRGHQDSV--TGLAVGGGFLFSSSYDRTILIWSLKDFSHVHT 561
Query: 214 SRSLGCTVRAL---AADTKLLVAGGTDGFIHCWKA---IEGLP----------------- 273
+ V AL + V+G G I W +E P
Sbjct: 562 FKGHQDKVMALIHIEGTEPVCVSGDGGGGIFVWSTTFPLEEQPLRKWYEPKDWRYTGIHA 621
Query: 274 -------HLFDVKGP--------QNHNTEFRLWEHEGPITTLALDLTRIYSGSWDMTVRV 333
H++ G Q+ + + H+ ++TL + +YSGSWD TVR+
Sbjct: 622 LAYSEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGHKSVVSTLVVVNGVLYSGSWDGTVRL 681
Query: 334 WDRFSQKCLRILRHGDWVWGLV--------PHDTTIASTSGSDVYVWDTNSGELATVIHD 393
W L +L G+ G+V T +A+ D+ +W + T++
Sbjct: 682 WSLSDNSLLTVL--GEETPGIVRSILSLAADDQTLVAAYQNGDIQIWRDD-----TLMKS 741
Query: 394 AHVGKAYALSRSHTGDFLFTGGEDGAIHMFDVTNRHVDTSAQLVGSWIPHSGPVYSLAF 407
+ LS + G +LFTGG D I++ +++ + + VGS IP S + SL +
Sbjct: 742 MKIQNGAILSIAVNGKWLFTGGWDKTINVQELSGDEISVNCAHVGS-IPGSSVITSLLY 790
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q94AD8 | 2.0e-202 | 62.11 | F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis thaliana OX=3702 ... | [more] |
D4AM37 | 2.2e-20 | 27.69 | Probable E3 ubiquitin ligase complex SCF subunit sconB OS=Arthroderma benhamiae ... | [more] |
C5FP68 | 2.2e-20 | 27.87 | Probable E3 ubiquitin ligase complex SCF subunit sconB OS=Arthroderma otae (stra... | [more] |
D4D8P3 | 2.2e-20 | 27.69 | Probable E3 ubiquitin ligase complex SCF subunit sconB OS=Trichophyton verrucosu... | [more] |
Q8YRI1 | 3.9e-17 | 27.86 | Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7... | [more] |