CmaCh02G005590 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCATCAATCCAACTTGGGTACTGCCAGTTCTAGCCTTGGGACTATTCCAAATAGTCGCCGGGCAGAGTTCAGCGGCAGCCAGAGATTTTTTACATTTTCACAACAAGGCAAGGGCGGAGGTGGGGGTGGAGCCACTGCAGTGGAGCCAAAATCTAGCCAATCTCACAGCCCGCCTCGTCCGATTCCAACGCAACCAAAAGATCTGCGACACCGCTGACGTGACCCGTTTCCGGTACGGCAAGAATCAGGATTGGTCGAATCGACCGGCACAGTCGCCGGGCCTGGCAGTGGAGCGGTGGGTTGAAAAGAAGGCGTTTTACAATCACACGAGCAACACGTGCACGAAGGATCGCCTATGTGGGGCTTATACTCAGGTGGTCTGGCGGAAGACGAAGGAAGTGGGGTGTGCTCAGGCGACGTGTCGGCAGGAACAGATTACTTTGACCATTTGTTTCTATAATCCTCCAGGAAACGGAATCGGTGAGAGACCGTATTAG ATGGGCATCAATCCAACTTGGGTACTGCCAGTTCTAGCCTTGGGACTATTCCAAATAGTCGCCGGGCAGAGTTCAGCGGCAGCCAGAGATTTTTTACATTTTCACAACAAGGCAAGGGCGGAGGTGGGGGTGGAGCCACTGCAGTGGAGCCAAAATCTAGCCAATCTCACAGCCCGCCTCGTCCGATTCCAACGCAACCAAAAGATCTGCGACACCGCTGACGTGACCCGTTTCCGGTACGGCAAGAATCAGGATTGGTCGAATCGACCGGCACAGTCGCCGGGCCTGGCAGTGGAGCGGTGGGTTGAAAAGAAGGCGTTTTACAATCACACGAGCAACACGTGCACGAAGGATCGCCTATGTGGGGCTTATACTCAGGTGGTCTGGCGGAAGACGAAGGAAGTGGGGTGTGCTCAGGCGACGTGTCGGCAGGAACAGATTACTTTGACCATTTGTTTCTATAATCCTCCAGGAAACGGAATCGGTGAGAGACCGTATTAG ATGGGCATCAATCCAACTTGGGTACTGCCAGTTCTAGCCTTGGGACTATTCCAAATAGTCGCCGGGCAGAGTTCAGCGGCAGCCAGAGATTTTTTACATTTTCACAACAAGGCAAGGGCGGAGGTGGGGGTGGAGCCACTGCAGTGGAGCCAAAATCTAGCCAATCTCACAGCCCGCCTCGTCCGATTCCAACGCAACCAAAAGATCTGCGACACCGCTGACGTGACCCGTTTCCGGTACGGCAAGAATCAGGATTGGTCGAATCGACCGGCACAGTCGCCGGGCCTGGCAGTGGAGCGGTGGGTTGAAAAGAAGGCGTTTTACAATCACACGAGCAACACGTGCACGAAGGATCGCCTATGTGGGGCTTATACTCAGGTGGTCTGGCGGAAGACGAAGGAAGTGGGGTGTGCTCAGGCGACGTGTCGGCAGGAACAGATTACTTTGACCATTTGTTTCTATAATCCTCCAGGAAACGGAATCGGTGAGAGACCGTATTAG MGINPTWVLPVLALGLFQIVAGQSSAAARDFLHFHNKARAEVGVEPLQWSQNLANLTARLVRFQRNQKICDTADVTRFRYGKNQDWSNRPAQSPGLAVERWVEKKAFYNHTSNTCTKDRLCGAYTQVVWRKTKEVGCAQATCRQEQITLTICFYNPPGNGIGERPY Homology
BLAST of CmaCh02G005590 vs. ExPASy Swiss-Prot
Match: Q41495 (STS14 protein OS=Solanum tuberosum OX=4113 GN=STS14 PE=2 SV=1) HSP 1 Score: 175.3 bits (443), Expect = 5.9e-43 Identity = 77/142 (54.23%), Postives = 105/142 (73.94%), Query Frame = 0
BLAST of CmaCh02G005590 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 5.0e-26 Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 0
BLAST of CmaCh02G005590 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3) HSP 1 Score: 117.1 bits (292), Expect = 1.9e-25 Identity = 64/159 (40.25%), Postives = 88/159 (55.35%), Query Frame = 0
BLAST of CmaCh02G005590 vs. ExPASy Swiss-Prot
Match: Q40374 (Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.3e-25 Identity = 58/145 (40.00%), Postives = 79/145 (54.48%), Query Frame = 0
BLAST of CmaCh02G005590 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.6e-24 Identity = 64/165 (38.79%), Postives = 93/165 (56.36%), Query Frame = 0
BLAST of CmaCh02G005590 vs. TAIR 10
Match: AT5G66590.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 178.3 bits (451), Expect = 5.0e-45 Identity = 83/143 (58.04%), Postives = 101/143 (70.63%), Query Frame = 0
BLAST of CmaCh02G005590 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 118.2 bits (295), Expect = 6.1e-27 Identity = 64/152 (42.11%), Postives = 92/152 (60.53%), Query Frame = 0
BLAST of CmaCh02G005590 vs. TAIR 10
Match: AT5G57625.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 112.8 bits (281), Expect = 2.6e-25 Identity = 54/143 (37.76%), Postives = 77/143 (53.85%), Query Frame = 0
BLAST of CmaCh02G005590 vs. TAIR 10
Match: AT1G01310.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 108.6 bits (270), Expect = 4.8e-24 Identity = 57/141 (40.43%), Postives = 74/141 (52.48%), Query Frame = 0
BLAST of CmaCh02G005590 vs. TAIR 10
Match: AT4G25790.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23 Identity = 51/138 (36.96%), Postives = 71/138 (51.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|