CmaCh01G019930 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G019930
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	high mobility group B protein 9-like
Location	Cma_Chr01: 12805284 .. 12807343 (-)
RNA-Seq Expression	CmaCh01G019930
Synteny	CmaCh01G019930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACGCCGGCGAGGACCAAGAGCTGGAATGGCGGCGTGGATAAGCATTACCCACCGGCGCTGGCCTCCCATGATGAAGTTATTTCTGACCCCATTGTGTTTTGGGACACTTTGAGGCGTTTTCATTTTGTGATGAACACCAAGTTCATGTGAGACACCTTTCTTCATCTTCTTCTTCTACTTTTTCTTTTTCTGACTTGGTAAATGAAGTAAAATGGCGCTGCACAGCCAAAAGATACCATTTTTTTACTCTTTTCCTTCCTCTAATTTCTAAGCATCAATCTTTATCCAGTAAAAAATATGAAGAAATCGAAGTTTTTAACTTTTACTTTCCTTTCCTTGAATACTTGAAAAGGATTCCTGTGATCGGAGGGAAGGAGCTAGACTTGCATGTTTTGTATTCAGAGGTTACAAGGAGGGGCGGCCATGAAAAGGTAAAGTTTGGCCCTTCGTCTTCCATTTTTCAACAACAAAGCTCTTGGTTTGGGAAAATGGAGTGATTTTGACGATGCAAGTTCCTATTTCATGGCGGGCTAGGTTGTTGCAGAGAAGAAATGGAGGGAAGTTGGAGGTATATTTAAGTTTTCTCCTACGACCACAAGTGCTTCGTTTGTATTGAGAAAACACTATCTAAGTCTTCTGTACCATTATGAGCAAGTTTACTTGTTCGGCCGGCAGGGCCCCATCTGTGCCCCTCAAGGTCCCTTTTTGTTCTCCGCTTCCATTTTTCCTTTTTTTACTTTATCCGTTATTTTCCATATCGGATTTTGCTGTAAATCTGAGTTGGGTTTTGTCCTTTTCTTCTTCTACAGCGCCATTATCTTTTGGTAGCCCTACGAGGGACAGCGAATTGGCTATGGTGGAATATACTCCCAAGACAACGTCGTTTTCGCCTGCGGAAGGTGACAACCTTTCACATTCCTTGCTTTTCTTCGTGGGGTCAAGTAATAAAAGTATAACAGTTGTTGCCACCAATGCCTTCCATTTAACTGATTCGATTCGATAAATTATTGGGAGGGAGGGACTGTAGAGCTGAGTGGCTACACCAAATAAATTCTCCTTGCTGTGTGTCTGTGTTGGTTTTTCATTCAGTTTTGTTCCATTCCTACTTTGCATCTCTTCATATTTGTTTTTTTTTTTTTTTTTTTTTTTAACCTAAGTGGTTGATGTTTTTCAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTAGTGACTGTGAAATTGGGGTCCGAGGTTCTTAGAGGAGTACTTTACCATCCAGATCAGCCAGTCCCGTCTAATCTACGGCCTCAGTCTACAAATGCCATTATACCTTACACTGGTGGCAGACAGAGACACGCTGGTCGACGACACCGGAGACGCCGGAGAAAGGCAGACCCTAACCACCCAAAACCGAACAGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAGAGGGAGTTCACCAAGATGATTGGAGAGTCTTGGAACAAACTAAGTCCTGAAGAAAGGATGGTATGTCTGTCTAGCTTTTTACCAAGGTTCCAACAGTTCTTGACTTTTTGTGGGTTTGATCAAATGGTTGTCTCTGCTCCTATAGGTTTATCAAAACATTGGGCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAGATGAGGCAGGCAACTGCTGATATTCAGGCGACTAAATATTCAAAACATGGAGAGTAACAAAGAAGGAAGAGAATTCAGCAGTTTAGGTTCTTTTTTTGGGTCTCTTCTCAAAGTTATATGATATATAAACTCTGTATCATATCCTCCTAACTTTACATGGCAAATCATGGGTTCTTATATCCAAGTGCTTGGCCTCAAACTGCTGCTACACACTACAATGTCAATTGGAATTCTCATACTATGCTCTGCTTAAACCATTTACATTGACAAATATCAAGAATGTTAGAACTTTCAGCTTTAAAGTGCCAGAGAAATGTGCCCTTTTAGTTTTTGTTTCAGTGGTCATGATGAAGCCAACCAAATGAGG

mRNA sequence

ATGTCAACGCCGGCGAGGACCAAGAGCTGGAATGGCGGCGTGGATAAGCATTACCCACCGGCGCTGGCCTCCCATGATGAAGTTATTTCTGACCCCATTGTGTTTTGGGACACTTTGAGGCGTTTTCATTTTGTGATGAACACCAAGTTCATGATTCCTGTGATCGGAGGGAAGGAGCTAGACTTGCATGTTTTGTATTCAGAGGTTACAAGGAGGGGCGGCCATGAAAAGGTTGTTGCAGAGAAGAAATGGAGGGAAGTTGGAGGTATATTTAAGTTTTCTCCTACGACCACAAGTGCTTCGTTTGTATTGAGAAAACACTATCTAAGTCTTCTGTACCATTATGAGCAAGTTTACTTGTTCGGCCGGCAGGGCCCCATCTGTGCCCCTCAAGCGCCATTATCTTTTGGTAGCCCTACGAGGGACAGCGAATTGGCTATGGTGGAATATACTCCCAAGACAACGTCGTTTTCGCCTGCGGAAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTAGTGACTGTGAAATTGGGGTCCGAGGTTCTTAGAGGAGTACTTTACCATCCAGATCAGCCAGTCCCGTCTAATCTACGGCCTCAGTCTACAAATGCCATTATACCTTACACTGGTGGCAGACAGAGACACGCTGGTCGACGACACCGGAGACGCCGGAGAAAGGCAGACCCTAACCACCCAAAACCGAACAGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAGAGGGAGTTCACCAAGATGATTGGAGAGTCTTGGAACAAACTAAGTCCTGAAGAAAGGATGGTTTATCAAAACATTGGGCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAGATGAGGCAGGCAACTGCTGATATTCAGGCGACTAAATATTCAAAACATGGAGAGTAACAAAGAAGGAAGAGAATTCAGCAGTTTAGGTTCTTTTTTTGGGTCTCTTCTCAAAGTTATATGATATATAAACTCTGTATCATATCCTCCTAACTTTACATGGCAAATCATGGGTTCTTATATCCAAGTGCTTGGCCTCAAACTGCTGCTACACACTACAATGTCAATTGGAATTCTCATACTATGCTCTGCTTAAACCATTTACATTGACAAATATCAAGAATGTTAGAACTTTCAGCTTTAAAGTGCCAGAGAAATGTGCCCTTTTAGTTTTTGTTTCAGTGGTCATGATGAAGCCAACCAAATGAGG

Coding sequence (CDS)

ATGTCAACGCCGGCGAGGACCAAGAGCTGGAATGGCGGCGTGGATAAGCATTACCCACCGGCGCTGGCCTCCCATGATGAAGTTATTTCTGACCCCATTGTGTTTTGGGACACTTTGAGGCGTTTTCATTTTGTGATGAACACCAAGTTCATGATTCCTGTGATCGGAGGGAAGGAGCTAGACTTGCATGTTTTGTATTCAGAGGTTACAAGGAGGGGCGGCCATGAAAAGGTTGTTGCAGAGAAGAAATGGAGGGAAGTTGGAGGTATATTTAAGTTTTCTCCTACGACCACAAGTGCTTCGTTTGTATTGAGAAAACACTATCTAAGTCTTCTGTACCATTATGAGCAAGTTTACTTGTTCGGCCGGCAGGGCCCCATCTGTGCCCCTCAAGCGCCATTATCTTTTGGTAGCCCTACGAGGGACAGCGAATTGGCTATGGTGGAATATACTCCCAAGACAACGTCGTTTTCGCCTGCGGAAGTTACTGGAACAATTGATGGGAAATTCGACTGTGGTTACCTAGTGACTGTGAAATTGGGGTCCGAGGTTCTTAGAGGAGTACTTTACCATCCAGATCAGCCAGTCCCGTCTAATCTACGGCCTCAGTCTACAAATGCCATTATACCTTACACTGGTGGCAGACAGAGACACGCTGGTCGACGACACCGGAGACGCCGGAGAAAGGCAGACCCTAACCACCCAAAACCGAACAGAAGTGGGTACAATTTCTTCTTTGCAGAGAAGCATTACAAGCTCAAATCTCTGTACCCAAACAGAGAGAGGGAGTTCACCAAGATGATTGGAGAGTCTTGGAACAAACTAAGTCCTGAAGAAAGGATGGTTTATCAAAACATTGGGCTGAAAGACAAGGAAAGATACAAGAGAGAGTTGAAAGAGTACAAGGAGAAGATGAGGCAGGCAACTGCTGATATTCAGGCGACTAAATATTCAAAACATGGAGAGTAA

Protein sequence

MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATADIQATKYSKHGE

Homology

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BLAST of CmaCh01G019930 vs. ExPASy Swiss-Prot
Match: Q9SGS2 (High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 7.1e-109
Identity = 204/311 (65.59%), Postives = 240/311 (77.17%), Query Frame = 0


Query: 16  KHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGH 75
           K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+
Sbjct: 25  KEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGY 84

Query: 76  EKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPLS 135
           EKVV EKKWREVGG+F+FS TTTSASFVLRKHYL+LL+HYEQV+LF  +GP+  P A   
Sbjct: 85  EKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHPIATF- 144

Query: 136 FGSPTRDSELAMVEYTPKTTSF----------SPAEVTGTIDGKFDCGYLVTVKLGSEVL 195
             +P+   E+A+VEYTP +  +          S     GTI+GKFDCGYLV VKLGSE+L
Sbjct: 145 HANPSTSKEMALVEYTPPSIRYHNTHPPSQGSSSFTAIGTIEGKFDCGYLVKVKLGSEIL 204

Query: 196 RGVLYHPDQPVPSNLRPQS--TNAIIPY--TGGRQRHAGRRHRRRRRKADPNHPKPNRSG 255
            GVLYH  QP PS+  P +   NA++PY  TG R+R  G+R RR RR+ DPN+PKPNRSG
Sbjct: 205 NGVLYHSAQPGPSS-SPTAVLNNAVVPYVETGRRRRRLGKR-RRSRRREDPNYPKPNRSG 264

Query: 256 YNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEY 313
           YNFFFAEKH KLKSLYPN+EREFTK+IGESW+ LS EERMVYQ+IGLKDKERY+REL EY
Sbjct: 265 YNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEY 324

[Close]

BLAST of CmaCh01G019930 vs. ExPASy Swiss-Prot
Match: Q9MAT6 (High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 2.1e-68
Identity = 138/315 (43.81%), Postives = 203/315 (64.44%), Query Frame = 0


Query: 23  ASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEK 82
           A+++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG  K++ E+
Sbjct: 23  ATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNER 82

Query: 83  KWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPI-----CAPQAPLSF- 142
           +W+EV   F F PT T+AS+VLRK+Y SLL +YEQ+Y F   G I      +P A   F 
Sbjct: 83  RWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIPPDSMQSPSARPCFI 142

Query: 143 -GSPTRDSELAMVEYTPKTT---------SFSPAEVTGTIDGKFDCGYLVTVKLGSEVLR 202
            G+     EL  + +TP+           S + + V G IDGKF+ GYLVTV +GSE L+
Sbjct: 143 QGAIRPSQELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESGYLVTVTIGSEQLK 202

Query: 203 GVLYHPDQPVPSNL----RPQSTNAIIPYT-----------GGRQRHAGRRHRRRRRKAD 262
           GVLY   Q +P N      PQ ++ ++P T           GG  +   RR +   ++ D
Sbjct: 203 GVLY---QLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKRRD 262

Query: 263 PNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDK 307
           P+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WNKL+ +E+++YQ   ++DK
Sbjct: 263 PDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDK 322

[Close]

BLAST of CmaCh01G019930 vs. ExPASy Swiss-Prot
Match: Q9LTT3 (High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 3.8e-54
Identity = 126/288 (43.75%), Postives = 173/288 (60.07%), Query Frame = 0


Query: 23  ASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEK 82
           A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG E+VV ++
Sbjct: 34  AKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDR 93

Query: 83  KWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPLSFGSPTRD 142
           KW+EV G F F  T TSASFVLRK+YL  L+  E VY           + P+S    T +
Sbjct: 94  KWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYL---------EKPVSSLQSTDE 153

Query: 143 S--ELAMVEYTPKTTSFSPA---EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPV 202
           +   LA     P+     P    EV G IDGKFD GYLVT+KLGS+ L+GVLYH P  P 
Sbjct: 154 ALKSLANESPNPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPS 213

Query: 203 PSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKA--DPNHPKPNRSGYNFFFAEKHYKLK 262
            S    ++ +AI+       + + RRHR++ + A  D   PK +RSGYNFFFAE++ +LK
Sbjct: 214 QSQQTMETPSAIV-------QSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLK 273

Query: 263 SLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYK 303
             Y  +ER  TK IG  W+ L+  E+ VYQ+ G+KD ERY+ E+ EYK
Sbjct: 274 PEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVERYRIEMLEYK 305

[Close]

BLAST of CmaCh01G019930 vs. ExPASy Swiss-Prot
Match: Q9LG02 (Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMGB11 PE=1 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 8.8e-43
Identity = 108/316 (34.18%), Postives = 163/316 (51.58%), Query Frame = 0


Query: 4   PARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLH 63
           PA   + +  V  H       + +++ +P +FW+ LR FH   + KF IP++GGK LDLH
Sbjct: 12  PANASALDNDVSSHMS---MLYQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLH 71

Query: 64  VLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGR 123
            L++EVT RGG EKV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +Y F  
Sbjct: 72  RLFNEVTSRGGLEKVIKDRRCKEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYF-- 131

Query: 124 QGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSP-----AEVTGTIDGKFDCGYLVTV 183
                  QAPLS       +   ++E +      S        +TG IDGKF+ GYL++ 
Sbjct: 132 -------QAPLSTFWEKEKALKLLIEKSANRDKDSQELKPGTVITGIIDGKFESGYLIST 191

Query: 184 KLGSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPN 243
           K+GSE L+G+LYH                I P T       G++  +  +      PK  
Sbjct: 192 KVGSEKLKGMLYH----------------ISPET-----KRGKKKAKSSQGDSHKPPKRQ 251

Query: 244 RSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKREL 303
           R+GYNFF AE+  ++K+    ++    K  G  W  LS  +R VY     +D +RYK E+
Sbjct: 252 RTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEI 294

Query: 304 KEYKEKMRQATADIQA 315
            +Y+  M    A+I A
Sbjct: 312 LQYRSLMESRVAEIVA 294

[Close]

BLAST of CmaCh01G019930 vs. ExPASy Swiss-Prot
Match: Q68CP9 (AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2 PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 2.3e-14
Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 0


Query: 33  IVFWDTLRRFHFVMNTKF-MIPVIGGKELDLHVLYSEVTRRGGHEKVVAEKKWREVGGIF 92
           + F D LR+FH    + F  IP +GGKELDLH LY+ VT  GG  KV  + +W E+   F
Sbjct: 17  LAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEF 76

Query: 93  KFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAP 134
            F  + ++A+F L+++YL  L  YE+V+ FG       P  P
Sbjct: 77  NFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNP 118

[Close]

BLAST of CmaCh01G019930 vs. ExPASy TrEMBL
Match: A0A6J1IY83 (high mobility group B protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111481010 PE=4 SV=1)

HSP 1 Score: 662.1 bits (1707), Expect = 1.1e-186
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL 180
           FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL
Sbjct: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL 180

Query: 181 GSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRS 240
           GSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRS
Sbjct: 181 GSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRS 240

Query: 241 GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE 300
           GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE
Sbjct: 241 GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE 300

Query: 301 YKEKMRQATADIQATKYSKHGE 323
           YKEKMRQATADIQATKYSKHGE
Sbjct: 301 YKEKMRQATADIQATKYSKHGE 322

[Close]

BLAST of CmaCh01G019930 vs. ExPASy TrEMBL
Match: A0A6J1FQ88 (high mobility group B protein 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446267 PE=4 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 7.7e-183
Identity = 316/322 (98.14%), Postives = 318/322 (98.76%), Query Frame = 0


Query: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNG VDKHYPPALA+HDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL 180
           FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL
Sbjct: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL 180

Query: 181 GSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRS 240
           GSEVLRGVLYHPDQPVPS+LRPQSTNAIIPYTGGRQRHAGRRHRRRRRK DPNHPKPNRS
Sbjct: 181 GSEVLRGVLYHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRS 240

Query: 241 GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE 300
           GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE
Sbjct: 241 GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE 300

Query: 301 YKEKMRQATADIQATKYSKHGE 323
           YKEKMRQATADIQAT  SKHGE
Sbjct: 301 YKEKMRQATADIQATNCSKHGE 322

[Close]

BLAST of CmaCh01G019930 vs. ExPASy TrEMBL
Match: A0A6J1FKI9 (high mobility group B protein 9-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446267 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 2.8e-177
Identity = 316/359 (88.02%), Postives = 318/359 (88.58%), Query Frame = 0


Query: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNG VDKHYPPALA+HDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQ-------------------------------------APLSFGSPTRDS 180
           FGRQGPICAPQ                                     APLSFGSPTRDS
Sbjct: 121 FGRQGPICAPQGPFLFSPSIFPFLLYPLFSISDFAVNLSWVLSFSSSTAPLSFGSPTRDS 180

Query: 181 ELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPVPSNLRPQ 240
           ELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPVPS+LRPQ
Sbjct: 181 ELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKLGSEVLRGVLYHPDQPVPSDLRPQ 240

Query: 241 STNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRSGYNFFFAEKHYKLKSLYPNRERE 300
           STNAIIPYTGGRQRHAGRRHRRRRRK DPNHPKPNRSGYNFFFAEKHYKLKSLYPNRERE
Sbjct: 241 STNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRSGYNFFFAEKHYKLKSLYPNRERE 300

Query: 301 FTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATADIQATKYSKHGE 323
           FTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATADIQAT  SKHGE
Sbjct: 301 FTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYKEKMRQATADIQATNCSKHGE 359

[Close]

BLAST of CmaCh01G019930 vs. ExPASy TrEMBL
Match: A0A5A7VAK3 (High mobility group B protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G003410 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 3.5e-167
Identity = 287/325 (88.31%), Postives = 303/325 (93.23%), Query Frame = 0


Query: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MS PARTK+WNGG+DKHYPP LA+HDEVISDPIVFWDTLRRFHF+MNTKFMIPVIGGKEL
Sbjct: 1   MSPPARTKTWNGGLDKHYPPPLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVG +FKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFS---PAEVTGTIDGKFDCGYLVT 180
           FGRQGPIC PQAP SFGSPT ++ELA+VEYTPKTTSFS   P+EVTGTIDGKFDCGYLVT
Sbjct: 121 FGRQGPICVPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVT 180

Query: 181 VKLGSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKP 240
           VKLGSEVLRGVLYHP+QP PS+LRP STNAI+PYTGGR RH+GRRHRR RRK DPNHPKP
Sbjct: 181 VKLGSEVLRGVLYHPEQPPPSDLRPLSTNAIVPYTGGRHRHSGRRHRRSRRKGDPNHPKP 240

Query: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRE 300
           NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWN LSPEERMVYQNIGLKDKERY+RE
Sbjct: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRE 300

Query: 301 LKEYKEKMRQATADIQATKYSKHGE 323
           LKEYKEKMR  T D+    YSKHG+
Sbjct: 301 LKEYKEKMRMGT-DVDGANYSKHGD 324

[Close]

BLAST of CmaCh01G019930 vs. ExPASy TrEMBL
Match: E5GCD0 (High mobility group family OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 3.5e-167
Identity = 287/325 (88.31%), Postives = 303/325 (93.23%), Query Frame = 0


Query: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MS PARTK+WNGG+DKHYPP LA+HDEVISDPIVFWDTLRRFHF+MNTKFMIPVIGGKEL
Sbjct: 1   MSPPARTKTWNGGLDKHYPPPLATHDEVISDPIVFWDTLRRFHFMMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVG +FKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGSVFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFS---PAEVTGTIDGKFDCGYLVT 180
           FGRQGPIC PQAP SFGSPT ++ELA+VEYTPKTTSFS   P+EVTGTIDGKFDCGYLVT
Sbjct: 121 FGRQGPICVPQAPFSFGSPTSENELALVEYTPKTTSFSPGPPSEVTGTIDGKFDCGYLVT 180

Query: 181 VKLGSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKP 240
           VKLGSEVLRGVLYHP+QP PS+LRP STNAI+PYTGGR RH+GRRHRR RRK DPNHPKP
Sbjct: 181 VKLGSEVLRGVLYHPEQPPPSDLRPLSTNAIVPYTGGRHRHSGRRHRRSRRKGDPNHPKP 240

Query: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRE 300
           NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWN LSPEERMVYQNIGLKDKERY+RE
Sbjct: 241 NRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNNLSPEERMVYQNIGLKDKERYRRE 300

Query: 301 LKEYKEKMRQATADIQATKYSKHGE 323
           LKEYKEKMR  T D+    YSKHG+
Sbjct: 301 LKEYKEKMRMGT-DVDGANYSKHGD 324

[Close]

BLAST of CmaCh01G019930 vs. NCBI nr
Match: XP_022982046.1 (high mobility group B protein 9-like [Cucurbita maxima] >XP_022982047.1 high mobility group B protein 9-like [Cucurbita maxima])

HSP 1 Score: 662.1 bits (1707), Expect = 2.4e-186
Identity = 322/322 (100.00%), Postives = 322/322 (100.00%), Query Frame = 0


Query: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL 180
           FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL
Sbjct: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL 180

Query: 181 GSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRS 240
           GSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRS
Sbjct: 181 GSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRS 240

Query: 241 GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE 300
           GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE
Sbjct: 241 GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE 300

Query: 301 YKEKMRQATADIQATKYSKHGE 323
           YKEKMRQATADIQATKYSKHGE
Sbjct: 301 YKEKMRQATADIQATKYSKHGE 322

[Close]

BLAST of CmaCh01G019930 vs. NCBI nr
Match: KAG6608616.1 (High mobility group B protein 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 651.0 bits (1678), Expect = 5.5e-183
Identity = 317/322 (98.45%), Postives = 319/322 (99.07%), Query Frame = 0


Query: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNG VDKHYPPALA+HDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL 180
           FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL
Sbjct: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL 180

Query: 181 GSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRS 240
           GSEVLRGVLYHPDQPVPS+LRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRS
Sbjct: 181 GSEVLRGVLYHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRS 240

Query: 241 GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE 300
           GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE
Sbjct: 241 GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE 300

Query: 301 YKEKMRQATADIQATKYSKHGE 323
           YKEKMRQATADIQAT  SKHGE
Sbjct: 301 YKEKMRQATADIQATNCSKHGE 322

[Close]

BLAST of CmaCh01G019930 vs. NCBI nr
Match: XP_022940773.1 (high mobility group B protein 9-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 649.4 bits (1674), Expect = 1.6e-182
Identity = 316/322 (98.14%), Postives = 318/322 (98.76%), Query Frame = 0


Query: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNG VDKHYPPALA+HDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL 180
           FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL
Sbjct: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL 180

Query: 181 GSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRS 240
           GSEVLRGVLYHPDQPVPS+LRPQSTNAIIPYTGGRQRHAGRRHRRRRRK DPNHPKPNRS
Sbjct: 181 GSEVLRGVLYHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKTDPNHPKPNRS 240

Query: 241 GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE 300
           GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE
Sbjct: 241 GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE 300

Query: 301 YKEKMRQATADIQATKYSKHGE 323
           YKEKMRQATADIQAT  SKHGE
Sbjct: 301 YKEKMRQATADIQATNCSKHGE 322

[Close]

BLAST of CmaCh01G019930 vs. NCBI nr
Match: XP_023525872.1 (high mobility group B protein 9-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 646.7 bits (1667), Expect = 1.0e-181
Identity = 315/322 (97.83%), Postives = 317/322 (98.45%), Query Frame = 0


Query: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNG VDKHYPPALA+HDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGNVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL 180
           FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL
Sbjct: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEVTGTIDGKFDCGYLVTVKL 180

Query: 181 GSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPNRS 240
           GSEVLRGVLYHPDQPVPS+LRPQSTNAIIPYTGGRQRH GRRHRRRRRKADPNHPKPNRS
Sbjct: 181 GSEVLRGVLYHPDQPVPSDLRPQSTNAIIPYTGGRQRHVGRRHRRRRRKADPNHPKPNRS 240

Query: 241 GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE 300
           GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE
Sbjct: 241 GYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKE 300

Query: 301 YKEKMRQATADIQATKYSKHGE 323
           YKEKMRQATADIQAT  SK GE
Sbjct: 301 YKEKMRQATADIQATNCSKRGE 322

[Close]

BLAST of CmaCh01G019930 vs. NCBI nr
Match: KAG7037933.1 (High mobility group B protein 9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 641.0 bits (1652), Expect = 5.6e-180
Identity = 316/336 (94.05%), Postives = 319/336 (94.94%), Query Frame = 0


Query: 1   MSTPARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60
           MSTPARTKSWNG VDKHYPPALA+HDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL
Sbjct: 1   MSTPARTKSWNGDVDKHYPPALATHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKEL 60

Query: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120
           DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL
Sbjct: 61  DLHVLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYL 120

Query: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAE--------------VTGTI 180
           FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAE              +TGTI
Sbjct: 121 FGRQGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSPAEGDNLSHSLLFFVGSITGTI 180

Query: 181 DGKFDCGYLVTVKLGSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRR 240
           DGKFDCGYLVTVKLGSEVLRGVLYHPDQPVPS+LRPQSTNAIIPYTGGRQRHAGRRHRRR
Sbjct: 181 DGKFDCGYLVTVKLGSEVLRGVLYHPDQPVPSDLRPQSTNAIIPYTGGRQRHAGRRHRRR 240

Query: 241 RRKADPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNI 300
           RRKADPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNI
Sbjct: 241 RRKADPNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNI 300

Query: 301 GLKDKERYKRELKEYKEKMRQATADIQATKYSKHGE 323
           GLKDKERYKRELKEYKEKMRQATADIQAT  SKHGE
Sbjct: 301 GLKDKERYKRELKEYKEKMRQATADIQATNCSKHGE 336

[Close]

BLAST of CmaCh01G019930 vs. TAIR 10
Match: AT1G76110.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 395.2 bits (1014), Expect = 5.0e-110
Identity = 204/311 (65.59%), Postives = 240/311 (77.17%), Query Frame = 0


Query: 16  KHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGH 75
           K YP  LA H+ V+ D  VFWDTLRRFH +M+TKFMIPVIGGKELDLHVLY EVTRRGG+
Sbjct: 25  KEYPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGY 84

Query: 76  EKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPLS 135
           EKVV EKKWREVGG+F+FS TTTSASFVLRKHYL+LL+HYEQV+LF  +GP+  P A   
Sbjct: 85  EKVVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARGPLLHPIATF- 144

Query: 136 FGSPTRDSELAMVEYTPKTTSF----------SPAEVTGTIDGKFDCGYLVTVKLGSEVL 195
             +P+   E+A+VEYTP +  +          S     GTI+GKFDCGYLV VKLGSE+L
Sbjct: 145 HANPSTSKEMALVEYTPPSIRYHNTHPPSQGSSSFTAIGTIEGKFDCGYLVKVKLGSEIL 204

Query: 196 RGVLYHPDQPVPSNLRPQS--TNAIIPY--TGGRQRHAGRRHRRRRRKADPNHPKPNRSG 255
            GVLYH  QP PS+  P +   NA++PY  TG R+R  G+R RR RR+ DPN+PKPNRSG
Sbjct: 205 NGVLYHSAQPGPSS-SPTAVLNNAVVPYVETGRRRRRLGKR-RRSRRREDPNYPKPNRSG 264

Query: 256 YNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEY 313
           YNFFFAEKH KLKSLYPN+EREFTK+IGESW+ LS EERMVYQ+IGLKDKERY+REL EY
Sbjct: 265 YNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDIGLKDKERYQRELNEY 324

[Close]

BLAST of CmaCh01G019930 vs. TAIR 10
Match: AT1G04880.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 260.8 bits (665), Expect = 1.5e-69
Identity = 138/315 (43.81%), Postives = 203/315 (64.44%), Query Frame = 0


Query: 23  ASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEK 82
           A+++ V++DP +F  +L R H ++ TKFM+P+IGG++LDLH L+ EVT RGG  K++ E+
Sbjct: 23  ATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFVEVTSRGGINKILNER 82

Query: 83  KWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPI-----CAPQAPLSF- 142
           +W+EV   F F PT T+AS+VLRK+Y SLL +YEQ+Y F   G I      +P A   F 
Sbjct: 83  RWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQIPPDSMQSPSARPCFI 142

Query: 143 -GSPTRDSELAMVEYTPKTT---------SFSPAEVTGTIDGKFDCGYLVTVKLGSEVLR 202
            G+     EL  + +TP+           S + + V G IDGKF+ GYLVTV +GSE L+
Sbjct: 143 QGAIRPSQELQALTFTPQPKINTAEFLGGSLAGSNVVGVIDGKFESGYLVTVTIGSEQLK 202

Query: 203 GVLYHPDQPVPSNL----RPQSTNAIIPYT-----------GGRQRHAGRRHRRRRRKAD 262
           GVLY   Q +P N      PQ ++ ++P T           GG  +   RR +   ++ D
Sbjct: 203 GVLY---QLLPQNTVSYQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKRRD 262

Query: 263 PNHPKPNRSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDK 307
           P+HPKPNRSGYNFFFAE+H +LK L+P ++R+ ++MIGE WNKL+ +E+++YQ   ++DK
Sbjct: 263 PDHPKPNRSGYNFFFAEQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDK 322

[Close]

BLAST of CmaCh01G019930 vs. TAIR 10
Match: AT3G13350.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 213.4 bits (542), Expect = 2.7e-55
Identity = 126/288 (43.75%), Postives = 173/288 (60.07%), Query Frame = 0


Query: 23  ASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLHVLYSEVTRRGGHEKVVAEK 82
           A +D+++ +  +FW+ LR F  + +    +P +GG  LDLH L+ EVT RGG E+VV ++
Sbjct: 34  AKYDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDR 93

Query: 83  KWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGRQGPICAPQAPLSFGSPTRD 142
           KW+EV G F F  T TSASFVLRK+YL  L+  E VY           + P+S    T +
Sbjct: 94  KWKEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYL---------EKPVSSLQSTDE 153

Query: 143 S--ELAMVEYTPKTTSFSPA---EVTGTIDGKFDCGYLVTVKLGSEVLRGVLYH-PDQPV 202
           +   LA     P+     P    EV G IDGKFD GYLVT+KLGS+ L+GVLYH P  P 
Sbjct: 154 ALKSLANESPNPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPS 213

Query: 203 PSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKA--DPNHPKPNRSGYNFFFAEKHYKLK 262
            S    ++ +AI+       + + RRHR++ + A  D   PK +RSGYNFFFAE++ +LK
Sbjct: 214 QSQQTMETPSAIV-------QSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLK 273

Query: 263 SLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKRELKEYK 303
             Y  +ER  TK IG  W+ L+  E+ VYQ+ G+KD ERY+ E+ EYK
Sbjct: 274 PEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVERYRIEMLEYK 305

[Close]

BLAST of CmaCh01G019930 vs. TAIR 10
Match: AT1G55650.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 175.6 bits (444), Expect = 6.3e-44
Identity = 108/316 (34.18%), Postives = 163/316 (51.58%), Query Frame = 0


Query: 4   PARTKSWNGGVDKHYPPALASHDEVISDPIVFWDTLRRFHFVMNTKFMIPVIGGKELDLH 63
           PA   + +  V  H       + +++ +P +FW+ LR FH   + KF IP++GGK LDLH
Sbjct: 12  PANASALDNDVSSHMS---MLYQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLH 71

Query: 64  VLYSEVTRRGGHEKVVAEKKWREVGGIFKFSPTTTSASFVLRKHYLSLLYHYEQVYLFGR 123
            L++EVT RGG EKV+ +++ +EV   F F  T T+++FVLRK YL +L+ +E +Y F  
Sbjct: 72  RLFNEVTSRGGLEKVIKDRRCKEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYF-- 131

Query: 124 QGPICAPQAPLSFGSPTRDSELAMVEYTPKTTSFSP-----AEVTGTIDGKFDCGYLVTV 183
                  QAPLS       +   ++E +      S        +TG IDGKF+ GYL++ 
Sbjct: 132 -------QAPLSTFWEKEKALKLLIEKSANRDKDSQELKPGTVITGIIDGKFESGYLIST 191

Query: 184 KLGSEVLRGVLYHPDQPVPSNLRPQSTNAIIPYTGGRQRHAGRRHRRRRRKADPNHPKPN 243
           K+GSE L+G+LYH                I P T       G++  +  +      PK  
Sbjct: 192 KVGSEKLKGMLYH----------------ISPET-----KRGKKKAKSSQGDSHKPPKRQ 251

Query: 244 RSGYNFFFAEKHYKLKSLYPNREREFTKMIGESWNKLSPEERMVYQNIGLKDKERYKREL 303
           R+GYNFF AE+  ++K+    ++    K  G  W  LS  +R VY     +D +RYK E+
Sbjct: 252 RTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRYKMEI 294

Query: 304 KEYKEKMRQATADIQA 315
            +Y+  M    A+I A
Sbjct: 312 LQYRSLMESRVAEIVA 294

[Close]

BLAST of CmaCh01G019930 vs. TAIR 10
Match: AT3G28730.1 (high mobility group )

HSP 1 Score: 47.0 bits (110), Expect = 3.4e-05
Identity = 26/82 (31.71%), Postives = 47/82 (57.32%), Query Frame = 0


Query: 222 RHRRRRRKADPNHPKPNRSGYNFFFAEKHYKLKSLYPN-REREFTKMIGESWNKLSPEER 281
           + ++ ++K DPN PK   SG+ FF   +   +K  +P     E  K++G+ W ++S +++
Sbjct: 549 KRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDK 608

Query: 282 MVYQNIGLKDKERYKRELKEYK 303
             Y+     DK+RYK E+ +YK
Sbjct: 609 EPYEAKAQVDKQRYKDEISDYK 630

The following BLAST results are available for this feature:

BLAST of CmaCh01G019930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SGS2	7.1e-109	65.59	High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV...	[more]
Q9MAT6	2.1e-68	43.81	High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 ...	[more]
Q9LTT3	3.8e-54	43.75	High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 ...	[more]
Q9LG02	8.8e-43	34.18	Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMG...	[more]
Q68CP9	2.3e-14	41.18	AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2...	[more]

BLAST of CmaCh01G019930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IY83	1.1e-186	100.00	high mobility group B protein 9-like OS=Cucurbita maxima OX=3661 GN=LOC111481010...	[more]
A0A6J1FQ88	7.7e-183	98.14	high mobility group B protein 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FKI9	2.8e-177	88.02	high mobility group B protein 9-like isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5A7VAK3	3.5e-167	88.31	High mobility group B protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
E5GCD0	3.5e-167	88.31	High mobility group family OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]

BLAST of CmaCh01G019930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982046.1	2.4e-186	100.00	high mobility group B protein 9-like [Cucurbita maxima] >XP_022982047.1 high mob...	[more]
KAG6608616.1	5.5e-183	98.45	High mobility group B protein 9, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022940773.1	1.6e-182	98.14	high mobility group B protein 9-like isoform X2 [Cucurbita moschata]	[more]
XP_023525872.1	1.0e-181	97.83	high mobility group B protein 9-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG7037933.1	5.6e-180	94.05	High mobility group B protein 9, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of CmaCh01G019930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76110.1	5.0e-110	65.59	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G04880.1	1.5e-69	43.81	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G13350.1	2.7e-55	43.75	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G55650.1	6.3e-44	34.18	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G28730.1	3.4e-05	31.71	high mobility group	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 291..318
None	No IPR available	SMART	SM01014	ARID_2	coord: 26..116 e-value: 1.8E-28 score: 110.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 216..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..211
None	No IPR available	PANTHER	PTHR46691:SF1	HIGH MOBILITY GROUP B PROTEIN 9	coord: 15..314
None	No IPR available	PANTHER	PTHR46691	HIGH MOBILITY GROUP B PROTEIN 9	coord: 15..314
None	No IPR available	CDD	cd16872	ARID_HMGB9-like	coord: 31..116 e-value: 4.65391E-46 score: 149.337
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 235..299 e-value: 9.54428E-19 score: 76.8977
IPR001606	ARID DNA-binding domain	SMART	SM00501	bright_3	coord: 30..121 e-value: 8.9E-31 score: 118.2
IPR001606	ARID DNA-binding domain	PFAM	PF01388	ARID	coord: 35..116 e-value: 5.8E-18 score: 65.3
IPR001606	ARID DNA-binding domain	PROSITE	PS51011	ARID	coord: 29..120 score: 24.535831
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 234..303 e-value: 6.4E-14 score: 62.2
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 235..302 e-value: 1.2E-11 score: 44.8
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 235..302 score: 14.571702
IPR036431	ARID DNA-binding domain superfamily	GENE3D	1.10.150.60		coord: 24..126 e-value: 8.3E-26 score: 91.9
IPR036431	ARID DNA-binding domain superfamily	SUPERFAMILY	46774	ARID-like	coord: 25..127
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 219..315 e-value: 1.5E-19 score: 72.2
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 232..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G019930.1	CmaCh01G019930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010197	polar nucleus fusion
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding