CmaCh01G017310 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G017310
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	glutaredoxin-C6
Location	Cma_Chr01: 11725284 .. 11725691 (+)
RNA-Seq Expression	CmaCh01G017310
Synteny	CmaCh01G017310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGCCTAAGACGCTGCTCCAACGACCTCCTCCTCCTCGACCTATCTCCGCCTTCCTCCGTCCCCTCCACGGCCTCGCTTTCCATCGACGATGCCGAGTCCGCCGAGACAAGAATCCGTCGCCTCATCTCCGAACATCCAGTCATCATCTTCAGCCGCACTTCTTGTTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCTCTATCGGCGTTCACCCTACCGTCATCGAATTAGACGACCACGAGATCGACGCTCTCGCCTCCTTCTCCTCCACCACCCCCGCAGCCGCTCCTGCCGTCTTCATCGGTGGCTCCTACGTCGGCGGCCTTGAATCCCTCGTCGCACTCCACCTCAGCGGCCACCTCGTACCTAAGCTTGTCGAAGTCGGCGCTCTCTGGGTATGA

mRNA sequence

ATGCAAGGCCTAAGACGCTGCTCCAACGACCTCCTCCTCCTCGACCTATCTCCGCCTTCCTCCGTCCCCTCCACGGCCTCGCTTTCCATCGACGATGCCGAGTCCGCCGAGACAAGAATCCGTCGCCTCATCTCCGAACATCCAGTCATCATCTTCAGCCGCACTTCTTGTTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCTCTATCGGCGTTCACCCTACCGTCATCGAATTAGACGACCACGAGATCGACGCTCTCGCCTCCTTCTCCTCCACCACCCCCGCAGCCGCTCCTGCCGTCTTCATCGGTGGCTCCTACGTCGGCGGCCTTGAATCCCTCGTCGCACTCCACCTCAGCGGCCACCTCGTACCTAAGCTTGTCGAAGTCGGCGCTCTCTGGGTATGA

Coding sequence (CDS)

ATGCAAGGCCTAAGACGCTGCTCCAACGACCTCCTCCTCCTCGACCTATCTCCGCCTTCCTCCGTCCCCTCCACGGCCTCGCTTTCCATCGACGATGCCGAGTCCGCCGAGACAAGAATCCGTCGCCTCATCTCCGAACATCCAGTCATCATCTTCAGCCGCACTTCTTGTTGCATGTGCCACGTCATGAAGAAGCTTCTCGCCTCTATCGGCGTTCACCCTACCGTCATCGAATTAGACGACCACGAGATCGACGCTCTCGCCTCCTTCTCCTCCACCACCCCCGCAGCCGCTCCTGCCGTCTTCATCGGTGGCTCCTACGTCGGCGGCCTTGAATCCCTCGTCGCACTCCACCTCAGCGGCCACCTCGTACCTAAGCTTGTCGAAGTCGGCGCTCTCTGGGTATGA

Protein sequence

MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLSGHLVPKLVEVGALWV

Homology

[Close]

BLAST of CmaCh01G017310 vs. ExPASy Swiss-Prot
Match: Q8L9S3 (Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 6.3e-43
Identity = 96/140 (68.57%), Postives = 109/140 (77.86%), Query Frame = 0


Query: 3   GLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMCHV 62
           GL+R SND++ LDL+PPS   ST SLSID+ ES E +IRRLISEHPVIIFSR+SCCMCHV
Sbjct: 6   GLQRFSNDVVRLDLTPPSQTSST-SLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHV 65

Query: 63  MKKLLASIGVHPTVIELDDHEIDALA-------SFSSTTPAAAPAVFIGGSYVGGLESLV 122
           MK+LLA+IGV PTVIELDDHE+ +L        S   +     PAVFIG   VGGLESLV
Sbjct: 66  MKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLV 125

Query: 123 ALHLSGHLVPKLVEVGALWV 136
           ALHLSG LVPKLV+VGALWV
Sbjct: 126 ALHLSGQLVPKLVQVGALWV 144

[Close]

BLAST of CmaCh01G017310 vs. ExPASy Swiss-Prot
Match: Q29PZ1 (Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-38
Identity = 89/150 (59.33%), Postives = 110/150 (73.33%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLS----PPSSVP-----------STASLSIDDAESAETRIRRLIS 60
           M+GLR CSND + LDL+    PP  +P           ++ SLS D+ E++E++I RLIS
Sbjct: 4   MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLIS 63

Query: 61  EHPVIIFSR-TSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIG 120
           EHPVIIF+R +SCCMCHVMKKLL+++GVHPTVIE+DD EI  LA        AAP +FIG
Sbjct: 64  EHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLA------VEAAPVLFIG 123

Query: 121 GSYVGGLESLVALHLSGHLVPKLVEVGALW 135
           G+ VGG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 GTCVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]

BLAST of CmaCh01G017310 vs. ExPASy Swiss-Prot
Match: Q0DK35 (Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.7e-25
Identity = 58/100 (58.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 34  ESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSST 93
           E    RI RL+ E PV+IF+R  CCMCHVM++LLA++G H TVIELD+   +A A  S+ 
Sbjct: 39  EQPAERIGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDEAAEEAAA--SAA 98

Query: 94  TPAAAPAVFIGGSYVGGLESLVALHLSGHLVPKLVEVGAL 134
             AA PA+F+GG+ VGGL+ L+ LHLSG LVP+L EVGAL
Sbjct: 99  AAAAVPALFVGGAPVGGLDGLMGLHLSGRLVPRLREVGAL 136

[Close]

BLAST of CmaCh01G017310 vs. ExPASy Swiss-Prot
Match: Q0JDM4 (Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2)

HSP 1 Score: 101.3 bits (251), Expect = 8.9e-21
Identity = 52/122 (42.62%), Postives = 72/122 (59.02%), Query Frame = 0


Query: 22  VPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELD- 81
           +P+ A +    AE+A  R+ RL SE  V++FS +SCCMCH +K+L   +GVHP V ELD 
Sbjct: 14  MPAAAMVVAAAAETAAERVERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAVHELDL 73

Query: 82  -------DHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLSGHLVPKLVEVGAL 136
                  +  +  L        AA P VFIGG  VG ++ ++A H++G LVP L E GAL
Sbjct: 74  DPRGRDLERALARLVGAGGAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLLKEAGAL 133

[Close]

BLAST of CmaCh01G017310 vs. ExPASy Swiss-Prot
Match: Q5SMY5 (Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-20
Identity = 59/114 (51.75%), Postives = 76/114 (66.67%), Query Frame = 0


Query: 27  SLSIDDA---ESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELD--- 86
           SL+ID A   E+   R+ RL+ E PV++F+R  C M HVM++LLA++G H TVIEL+   
Sbjct: 15  SLTIDPAGEEEAPAERVGRLVRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIELEGGA 74

Query: 87  -DHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLSGHLVPKLVEVGAL 134
            + E  AL        AA PA+F+GG  VGGLE L+ LHLSG LVP+L EVGAL
Sbjct: 75  AEEEEAALGG-----GAALPALFVGGDPVGGLEGLMGLHLSGRLVPRLREVGAL 123

[Close]

BLAST of CmaCh01G017310 vs. ExPASy TrEMBL
Match: A0A6J1IWK8 (glutaredoxin-C6 OS=Cucurbita maxima OX=3661 GN=LOC111481252 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.0e-67
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLS 120
           HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLS
Sbjct: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLS 120

Query: 121 GHLVPKLVEVGALWV 136
           GHLVPKLVEVGALWV
Sbjct: 121 GHLVPKLVEVGALWV 135

[Close]

BLAST of CmaCh01G017310 vs. ExPASy TrEMBL
Match: A0A6J1FK67 (glutaredoxin-C6-like OS=Cucurbita moschata OX=3662 GN=LOC111446482 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.2e-65
Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSNDLLLLDLSPPSSVPSTASLSID AESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLS 120
           HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVF+GGSYVGGLESLVALHLS
Sbjct: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFMGGSYVGGLESLVALHLS 120

Query: 121 GHLVPKLVEVGALWV 136
           GHLVPKLVEVGALWV
Sbjct: 121 GHLVPKLVEVGALWV 135

[Close]

BLAST of CmaCh01G017310 vs. ExPASy TrEMBL
Match: A0A5D3D950 (Glutaredoxin-C6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002100 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.7e-55
Identity = 119/136 (87.50%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLS-PPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLL LDLS PPS+ PS ASLSID AESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHL 120
           CHVMKKLLA+IGVHPTVIEL+D EI ALASFSSTT  A PAVFIGG+++GGLESLVALHL
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTT-TATPAVFIGGAFLGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 136
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of CmaCh01G017310 vs. ExPASy TrEMBL
Match: A0A0A0L5B1 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G646150 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.7e-55
Identity = 119/136 (87.50%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLS-PPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLL LDLS PPS+ PS ASLSID AESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHL 120
           CHVMKKLLA+IGVHPTVIEL+D EI ALASFSSTT  A PAVFIGG+++GGLESLVALHL
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTT-TATPAVFIGGAFLGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 136
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of CmaCh01G017310 vs. ExPASy TrEMBL
Match: A0A1S3BUK1 (glutaredoxin-C6 OS=Cucumis melo OX=3656 GN=LOC103493666 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.7e-55
Identity = 119/136 (87.50%), Postives = 126/136 (92.65%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLS-PPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLL LDLS PPS+ PS ASLSID AESA+TRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPSTTPSPASLSIDVAESADTRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHL 120
           CHVMKKLLA+IGVHPTVIEL+D EI ALASFSSTT  A PAVFIGG+++GGLESLVALHL
Sbjct: 61  CHVMKKLLATIGVHPTVIELEDDEIHALASFSSTT-TATPAVFIGGAFLGGLESLVALHL 120

Query: 121 SGHLVPKLVEVGALWV 136
           SGHLVPKLVEVGALWV
Sbjct: 121 SGHLVPKLVEVGALWV 135

[Close]

BLAST of CmaCh01G017310 vs. NCBI nr
Match: XP_022982422.1 (glutaredoxin-C6 [Cucurbita maxima])

HSP 1 Score: 263.5 bits (672), Expect = 1.0e-66
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLS 120
           HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLS
Sbjct: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLS 120

Query: 121 GHLVPKLVEVGALWV 136
           GHLVPKLVEVGALWV
Sbjct: 121 GHLVPKLVEVGALWV 135

[Close]

BLAST of CmaCh01G017310 vs. NCBI nr
Match: KAG6608371.1 (Glutaredoxin-C6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSNDLLLLDLSPPSSVPSTASLSID AESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLS 120
           HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLS
Sbjct: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLS 120

Query: 121 GHLVPKLVEVGALWV 136
           GHLVPKLVEVGALWV
Sbjct: 121 GHLVPKLVEVGALWV 135

[Close]

BLAST of CmaCh01G017310 vs. NCBI nr
Match: XP_022941086.1 (glutaredoxin-C6-like [Cucurbita moschata])

HSP 1 Score: 258.8 bits (660), Expect = 2.5e-65
Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSNDLLLLDLSPPSSVPSTASLSID AESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLS 120
           HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVF+GGSYVGGLESLVALHLS
Sbjct: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFMGGSYVGGLESLVALHLS 120

Query: 121 GHLVPKLVEVGALWV 136
           GHLVPKLVEVGALWV
Sbjct: 121 GHLVPKLVEVGALWV 135

[Close]

BLAST of CmaCh01G017310 vs. NCBI nr
Match: XP_023524422.1 (glutaredoxin-C6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.5 bits (659), Expect = 3.3e-65
Identity = 133/135 (98.52%), Postives = 133/135 (98.52%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQGLRRCSNDLLLLDLSPPSSVPSTASLSID AESAETRIRRLISEHPVIIFSRTSCCMC
Sbjct: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDVAESAETRIRRLISEHPVIIFSRTSCCMC 60

Query: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLS 120
           HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAA PAVFIGGSYVGGLESLVALHLS
Sbjct: 61  HVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAATPAVFIGGSYVGGLESLVALHLS 120

Query: 121 GHLVPKLVEVGALWV 136
           GHLVPKLVEVGALWV
Sbjct: 121 GHLVPKLVEVGALWV 135

[Close]

BLAST of CmaCh01G017310 vs. NCBI nr
Match: XP_038899998.1 (glutaredoxin-C6-like [Benincasa hispida])

HSP 1 Score: 228.0 bits (580), Expect = 4.8e-56
Identity = 122/137 (89.05%), Postives = 127/137 (92.70%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLS-PPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCM 60
           MQGLRRCSNDLL LDLS PP + PS ASLSID AESAETRIRRLISEHPVIIFSRTSCCM
Sbjct: 1   MQGLRRCSNDLLHLDLSPPPPTTPSPASLSIDVAESAETRIRRLISEHPVIIFSRTSCCM 60

Query: 61  CHVMKKLLASIGVHPTVIELDDHEIDALASFSSTT-PAAAPAVFIGGSYVGGLESLVALH 120
           CHVMKKLLA+IGVHPTVIELDD EIDAL+S SSTT PAA PAVFIGG++VGGLESLVALH
Sbjct: 61  CHVMKKLLATIGVHPTVIELDDDEIDALSSCSSTTVPAATPAVFIGGAFVGGLESLVALH 120

Query: 121 LSGHLVPKLVEVGALWV 136
           LSGHLVPKLVEVGALWV
Sbjct: 121 LSGHLVPKLVEVGALWV 137

[Close]

BLAST of CmaCh01G017310 vs. TAIR 10
Match: AT4G33040.1 (Thioredoxin superfamily protein )

HSP 1 Score: 174.9 bits (442), Expect = 4.5e-44
Identity = 96/140 (68.57%), Postives = 109/140 (77.86%), Query Frame = 0


Query: 3   GLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMCHV 62
           GL+R SND++ LDL+PPS   ST SLSID+ ES E +IRRLISEHPVIIFSR+SCCMCHV
Sbjct: 6   GLQRFSNDVVRLDLTPPSQTSST-SLSIDEEESTEAKIRRLISEHPVIIFSRSSCCMCHV 65

Query: 63  MKKLLASIGVHPTVIELDDHEIDALA-------SFSSTTPAAAPAVFIGGSYVGGLESLV 122
           MK+LLA+IGV PTVIELDDHE+ +L        S   +     PAVFIG   VGGLESLV
Sbjct: 66  MKRLLATIGVIPTVIELDDHEVSSLPTALQDEYSGGVSVVGPPPAVFIGRECVGGLESLV 125

Query: 123 ALHLSGHLVPKLVEVGALWV 136
           ALHLSG LVPKLV+VGALWV
Sbjct: 126 ALHLSGQLVPKLVQVGALWV 144

[Close]

BLAST of CmaCh01G017310 vs. TAIR 10
Match: AT5G11930.1 (Thioredoxin superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.1e-39
Identity = 89/150 (59.33%), Postives = 110/150 (73.33%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLS----PPSSVP-----------STASLSIDDAESAETRIRRLIS 60
           M+GLR CSND + LDL+    PP  +P           ++ SLS D+ E++E++I RLIS
Sbjct: 4   MRGLRNCSNDAVTLDLTVHPPPPPPLPPPAPSTVSSSTASTSLSFDEEETSESKIGRLIS 63

Query: 61  EHPVIIFSR-TSCCMCHVMKKLLASIGVHPTVIELDDHEIDALASFSSTTPAAAPAVFIG 120
           EHPVIIF+R +SCCMCHVMKKLL+++GVHPTVIE+DD EI  LA        AAP +FIG
Sbjct: 64  EHPVIIFTRFSSCCMCHVMKKLLSTVGVHPTVIEIDDGEIAYLA------VEAAPVLFIG 123

Query: 121 GSYVGGLESLVALHLSGHLVPKLVEVGALW 135
           G+ VGG ESLVALHLSG L+P+LVEVGALW
Sbjct: 124 GTCVGGFESLVALHLSGQLIPRLVEVGALW 147

[Close]

BLAST of CmaCh01G017310 vs. TAIR 10
Match: AT1G28480.1 (Thioredoxin superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 5.0e-19
Identity = 52/142 (36.62%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 1   MQGLRRCSNDLLLLDLSPPSSVPSTASLSIDDAESAETRIRRLISEHPVIIFSRTSCCMC 60
           MQG   C+ +  +      S  P    LS+    + E R+R ++ E+ VI+  R  CCMC
Sbjct: 1   MQGTISCARNYNMTTTVGESLRP----LSLKTQGNGE-RVRMVVEENAVIVIGRRGCCMC 60

Query: 61  HVMKKLLASIGVHPTVIELDDH-------EIDALASFSSTTPAAAPAVFIGGSYVGGLES 120
           HV+++LL  +GV+P V+E+D+        E++ +           PAV++GG   GGL+ 
Sbjct: 61  HVVRRLLLGLGVNPAVLEIDEEREDEVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDR 120

Query: 121 LVALHLSGHLVPKLVEVGALWV 136
           ++A H+SG LVP L EVGALW+
Sbjct: 121 VMATHISGELVPILKEVGALWL 137

[Close]

BLAST of CmaCh01G017310 vs. TAIR 10
Match: AT3G02000.1 (Thioredoxin superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 2.5e-18
Identity = 48/112 (42.86%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 33  AESAETRIRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDDHE--------- 92
           A++   RI  L SE  V+IFS ++CCMCH +K L   +GV P V ELD H          
Sbjct: 25  ADTGLLRIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRAL 84

Query: 93  IDALASFSSTTPAAAPAVFIGGSYVGGLESLVALHLSGHLVPKLVEVGALWV 136
           I  L    S++P + P VFIGG  VG ++ ++A H++G LVP L + GALW+
Sbjct: 85  IRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGALWL 136

[Close]

BLAST of CmaCh01G017310 vs. TAIR 10
Match: AT5G18600.1 (Thioredoxin superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 4.2e-18
Identity = 45/100 (45.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 40  IRRLISEHPVIIFSRTSCCMCHVMKKLLASIGVHPTVIELDD----HEIDALASFSSTTP 99
           I +++ E PV+I+S++SCCM H +K LL   G +P V ELD+     EI+        +P
Sbjct: 4   ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELDEISRGREIEQALLRLGCSP 63

Query: 100 AAAPAVFIGGSYVGGLESLVALHLSGHLVPKLVEVGALWV 136
            A P VFIGG  VGG   +++LHL+G L+P L   GALWV
Sbjct: 64  -AVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGALWV 102

The following BLAST results are available for this feature:

BLAST of CmaCh01G017310 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S3	6.3e-43	68.57	Glutaredoxin-C6 OS=Arabidopsis thaliana OX=3702 GN=GRXC6 PE=2 SV=2	[more]
Q29PZ1	1.6e-38	59.33	Glutaredoxin-C10 OS=Arabidopsis thaliana OX=3702 GN=GRXC10 PE=2 SV=1	[more]
Q0DK35	7.7e-25	58.00	Glutaredoxin-C7 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC7 PE=3 SV=1	[more]
Q0JDM4	8.9e-21	42.62	Glutaredoxin-C5 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC5 PE=2 SV=2	[more]
Q5SMY5	1.2e-20	51.75	Monothiol glutaredoxin-S2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS2 PE=2...	[more]

BLAST of CmaCh01G017310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IWK8	5.0e-67	100.00	glutaredoxin-C6 OS=Cucurbita maxima OX=3661 GN=LOC111481252 PE=3 SV=1	[more]
A0A6J1FK67	1.2e-65	98.52	glutaredoxin-C6-like OS=Cucurbita moschata OX=3662 GN=LOC111446482 PE=3 SV=1	[more]
A0A5D3D950	5.7e-55	87.50	Glutaredoxin-C6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134...	[more]
A0A0A0L5B1	5.7e-55	87.50	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G64615...	[more]
A0A1S3BUK1	5.7e-55	87.50	glutaredoxin-C6 OS=Cucumis melo OX=3656 GN=LOC103493666 PE=3 SV=1	[more]

BLAST of CmaCh01G017310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982422.1	1.0e-66	100.00	glutaredoxin-C6 [Cucurbita maxima]	[more]
KAG6608371.1	1.1e-65	99.26	Glutaredoxin-C6, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022941086.1	2.5e-65	98.52	glutaredoxin-C6-like [Cucurbita moschata]	[more]
XP_023524422.1	3.3e-65	98.52	glutaredoxin-C6 [Cucurbita pepo subsp. pepo]	[more]
XP_038899998.1	4.8e-56	89.05	glutaredoxin-C6-like [Benincasa hispida]	[more]

BLAST of CmaCh01G017310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33040.1	4.5e-44	68.57	Thioredoxin superfamily protein	[more]
AT5G11930.1	1.1e-39	59.33	Thioredoxin superfamily protein	[more]
AT1G28480.1	5.0e-19	36.62	Thioredoxin superfamily protein	[more]
AT3G02000.1	2.5e-18	42.86	Thioredoxin superfamily protein	[more]
AT5G18600.1	4.2e-18	45.00	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 105..118 score: 31.25 coord: 49..67 score: 35.31 coord: 91..104 score: 29.76
IPR011905	Glutaredoxin-like, plant II	TIGRFAM	TIGR02189	TIGR02189	coord: 40..135 e-value: 3.4E-36 score: 121.2
IPR011905	Glutaredoxin-like, plant II	PANTHER	PTHR10168	GLUTAREDOXIN	coord: 7..134
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 49..108 e-value: 4.9E-10 score: 39.5
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 29..134 e-value: 1.3E-26 score: 94.5
None	No IPR available	PANTHER	PTHR10168:SF56	GLUTAREDOXIN-C6	coord: 7..134
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 37..134 score: 21.016438
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 48..126 e-value: 2.00475E-30 score: 102.618
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 38..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G017310.1	CmaCh01G017310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0097573	glutathione oxidoreductase activity