Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACCCAAAACCTCGCGTTCAACTTCGTCCCCATCTCCGACTGGCGGAAAATGTTGCGATCAATTCTCAGAGCAGCAGCCGCCGCTGCCGCAGCCTCTAGACACCAGCCGTACAATCGGAATCCCTCTCCGATCCTATCTTTTACTTCAAATTACTCAGCTAAGACAACCAAATCCGCCGTTAAGAAGGAGCCCAAGAAGGGCAAGTCCAAGGGCGACGGCAAAGCTACCGATGATCCCTCTGCCTCCGCTGCTGCTTCCGACGACTCAGATGCGGCGCTTTTTGATGATAAATCTCGAGCCCGCCGTCTTGCTGCCGAGGAAAATGATCACTCACTCGACGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCTTCACTGTCACAGCTCACTCGCAAGGATGCAGGCACTTATTTCAAATTTAAGTACGTATGTTTTCTACATTGTTTATGAGTGACTGTTTATTGGAATATTTATTCGTTTCTTTACGAAATGGAAGTATGGAAGGACTAAATGAGGTACTGCCGGAGGGTTTGCCTTTGGGAATGGTCAAGGAGTTCGAGGATTCTATGCGAAGTGCTGTGCTTGTGCGGCAAAATTTTTTGGATCTTCGCGACAATTTCAGGCGTGTGGTTGATCCTTCATTGCTGTCGCCGGCTGGTATTGCTTTTCTTCTACTATCTTTTCTTTGATGGTGGGGGGGTTGAGCAAATGTATTCATGTTTTTTCTTGCTGCTATTTCAATTCAAACATTCAGGTTCAAAAATTAGAAAACAGATCGTATTGGATGGTCCGGTCAATAGTGGAAAGAGTATTGCGCTCGCCATGCTTGTTCACTGGGCTCGCGATGAAGGTTGGCTAGTTTTTTATGTTCCTAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTTTAAAAACGCTGAAACAGGACTTTGGGATACACCCGTTCAGGCTGAAGATGTTCTGAGAGTGAGGACCTTTTCCTGCTAATTAAGAGTTAGAAGTATGGGGTGCGTGTGTGTGTGTGTGTTTTTCAGGATCTTCTAGTGCATTTGTCATGAACATTGTATGTGCATCAAATGCCAGTTTAAGGGGTTGTTTTCTAATTCTATTGATAAATGTTAATTCTTACACACCCCATTGAGAATCTTGACAAGGGAAATGATGTTCGTGATCATGATTCTTTATTTGACTGGGAAATGTTTCATGCATAGTGTTTACTATTTTGTGATTAGCTTTCTGGAGATCAAGTGAGGACTGTGGATAATATGTGAAGCTGAAACAGTTGACATATTTATTTTTCATTGGCGGACTGGTTTTGACCAGGATTTTCTGAAGTACAATGAGACCCGCTTAAGACAACTGCCATGTCAATTATCTGATCCTATACCATTGGGAGAGGGTGTTGGTGTCGGGATGAAGAAAGGTGCTGATTCCATGATGATGCCTGAGGGTTCAACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGCAGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAATTATCGCTTGTGAAAGATATTCCCGTGCTTTTCGCTATTGATCAAGTGAGACACAAAAATACATCTTCCATTTCTTTGATTTCTAACATAAAGTTCCATTTCTTTGATTGCTTATTCGTGGCTGTTTCTTTTTGTTCAGTATAACAACTGGTTTACATTCAGTGAATTTGAAGAACCAGTGACCGTTCGCTCTACTCGACCAATACATGCCAGAGAACTCGCAATGGTTAGTACGAACTACTTGCTTGGATTGATTTTTCTTTTCTGTTTCTATTCGCTAACATTCATTGCAATACATTGGATGTTCCTGGAATATCTTGTTCAGTTTGTATGTGTTTGTGTTTTTTCTTGGTTCAACATCTTTTTACTTCCACCAAAATTACCTTGTGTGTTTAAGCATCGCATTGGAACTGGTCCCTACCTCCTGTCTTGAAACAGGGAGAGTATACATTATATGTGAAATGTTCTTTTATGTTTTTATTTTTTATGGAAAACAAACATCTTTTCATGGAAATCTTAGGTAGACTGCATTTTCAGCTTTCAGCATATACTCCTTGCTCATGGAACTACAGACTTTTTAATTATGATTATTGGGTCGGCCTTCTAATTTAGTTGGAATTAAACATTTTCCCCTGTTACCTACATTTAAATTTGCTAGCCTTTATACTTCCATTTTTATAGATTTGATTCCATTGCCTAAAAAATGTAATTTTTGTGGTAAAACTCATTTCCCTCATTTATTTTTCTGGTTCAATGTTCGGGGACTTAAAAACAACAAATGGAATGATTGATCCAAAAAGGAAACTGAAGTTGAAAGAACGATTAAATTAACAATTTTTGTGAATACAAATGAAGAAATATAATAGTTCCGCTTAGGATTTATTCTTCTCTCTTTTTTGGTAGATAGCTTTTTTGGGGAGTATTTATTTGTTATGACTGCACATATGGTTTCAGCCATGTTTTTTTCTTCCATATTTTCTCTTTTCTATCCTTTTCTTTTTCCTATATATCATTTAGATTAGTTTTGAAACCTACCATTCAATTTGACGTGAAATCTAATAGTCTTAGATTGCTGAAAAAGGGTTCAAGGCAGTTGGGAGTATTTAGGATCATGGAGTAAAATGAGTTGACCTAGTGACGAATAAGGGTTGATGTAAGTGGTTAAATATTTAGAGGGAATAGTTTCAAACTACGGTGACCATGGAGCTAAGATTTATTATCCTATGAGGTTCCTAAGCTTTCCTTTTATTTATTCTCAATAAATTCATCTCTTGATAGTTGGGCAGTTGACTTGTGAGACTAGTCAAGGTGCTACAATATGACTCAAACACTCATGGATTTATATATAAAAAAGATTATTCTGAATCCGGGAGTAAAGATAGAATATTAAGAGAGAATGTTGATGACTCATTTAGTGAATAGTATGTTATTGGCTGGGCACAACTCACCCTAGCTACAAATGAAAAAGTGAAGCTTATTTATAAAAGAAAAAATGAAAAAGAAAGCCAAAGAAGAAGGTAGTACCTTTACAATGCCAATAGTTCAGAAGTTTGGGTTGTAATTGTTGGAGGTCCAATATTTTAGGTTAGACAAGTTTGACCAAATTTATTCAATAAATCTCTAATAAGTTTTTAAATTTTCACTGCTATCTAACACAAGTGTTGTTTCCAAGTCATTGAAATTTAAAAATTGCATCTAAACTCTTGTAACTAAAAAGTCTCTTAACTTCTAATTTTGTATTTAATAGAATCCTTGAGATAATTTATTAGTTTCAAGAACTTGTTAGACTCAAAATTTATAGTTTAAGTACCTATAAATGCTTTTTAAAGTTTGGGCACCTATTAGACATAACATTGAAACTTTAGGAGCCTTTTAGATACAACTAATATTGAACTTTATGAGCCTTTTCGATACAATGTTGAATGATGAAACTTTTACCTTTGTATAATGATTTTGAAATTGTTCTTAAATTCTTATCTGTTTTGGTTTTTTTGTTTCTCAATCAATGATAAGAATTACAAATTTTTTCACAGGTAAAAGCTTTTAGGTCTATGATGCATGATGACATGATGGTTGGTGCTTTCTCTCATTCAACTGCTGTTGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCCTTAGGTGCACGTGTTAATTTCCCTCGCTACAATCTTGATGAAGCAGCTTCTGTTTTTCACTATTACCTCAGGTATGCTTATTTTGTTGTTATTTTGAAAAGACACTGATTTCATTGAAAAAAGAAAATTAAGAATGTTACATGAAGAGAAAAAGGAATCCTACAAAAGCTTTGATAGTTAAGGATTTAGAATAAGCCCCTATTTGGCTATTAGAGGAGATGGAGCATTTAGAAACGAAAAGCTCCTCTCATCGAATCTTATAGAGGCGATAGTAAGTTGCAGAAAGAGTTAGCTGTTGGATGGCATTGCCAACTCCCATCTCTTGATTTATATCCTAAAAAAAAATTTCTTTTGAAGTTCTGTAATTTTATAAGATATAAATGCAGTACTTGACTTAACAATACCTGATGAACTAGGCTTGTTTATTAGAGGGACCACAACCTACTTAGGAGAGTCCTCTAGACTCATTGAGTTGAAAGCAACCTATTACAGGTTAAAACCGTCCAAAATTTCTCTAGTACACTTCCTCGTAAGAGAACAATGGAAGAAACAAGTGATCATGTTCTGTATCTGTATGCTAATGGGTAGGACATCCTTTTGGCACCATATGTCTATTAATTTTTTTCTAGAGATAAAACCAGCCTCCTGAAAATCCAAGTATAACTAATTTTTCCTCAGAAACTTGTGTCGCAAATTCACAAGTCATAATACTAATTTGTTGCAGTGATCCGGATAACAGCTTATAATATTAGAAACAGAATTATTTCAGTGAAAAACCAAAGTATACAAGGGAGTAAAGTCAAGGGAAGTGTATGATCCTTTACTGCAATATATGCTGCTTTGAGAATAGTTTGAAAAGGAAGAGTACGAAATGCTCCTAGAAGAAAGAAAAACTACTGTCTTAAAACTATCAAGAGTTCTATCAATCCTTTGGAGAATCTGTTGTTTCAGATGAGAGTTTCATTGGCCAATTGAATAGGTAGGTAGGTACTTTCTATGACAGGACCACTTTTAACTGTAAAAGGTCATAGTAATTGACGTCTGGTTAAGTACAGTCTGATCTTTTATGTGAGGCTTTTCCTATGAACAACATTCAGTACTTTTGAGGGGATTGTTGTTTTCTTTATTTCTTTTTATTGAAATTCTTGAACTGTAACATGAATGTCACTCATCGCAATGTAGTTTGCAATCTGAAGTTGCAAAGGTATACCTGCTTGGTCGTTTGTATGAATGTTACCCAAGTTTGTGATTCTATTCGTAAAACGAACAGTAGAATGCATTGCTTAGTTAGTTGTTGATCATTTTCTTGACAGACAAAGATTGATACGCCGTGAAGTCTTCTCAGAAGATGCCTGGAAAAAGGTATACTATTTGTCAAATGGAAATGGAGCAGAAATCCGGTGGTTGGTACCATTTATGCGGTGACAGTGACACCAATGGGGCTAAGTTTCCTCCTCGCCTGTTCACATTGATGACTGGACACGGTACCATCGCTTAGAACTCATGCATATTTCTTCACTTGGAATTAGATATCCCTAACCCTCACAAGATGTGCGACATATCATAGGGCATTCTGGGCTAAAATACCGAGTCTGAGTGTTTGTATTTGTAAGTTTAGCGCGCGCACATCGGAGAAGTAACCTTTTCTACGCAACAATTTTTATTGTCTACTGGGCTACGCTTATCATCTTTTGTGTTCTTTTATTAATATATATTTTAAATACATTCTTCAATAAGGTGTTATCTTTTAAGGAAGAACTTGAGATGCCCAATTTAGCTGTTAGTTTTGCAGGCCATGTCCATACTCTTTAGTACTTATATATTGTATTTTTGATCTCTAG
mRNA sequence
AAAACCCAAAACCTCGCGTTCAACTTCGTCCCCATCTCCGACTGGCGGAAAATGTTGCGATCAATTCTCAGAGCAGCAGCCGCCGCTGCCGCAGCCTCTAGACACCAGCCGTACAATCGGAATCCCTCTCCGATCCTATCTTTTACTTCAAATTACTCAGCTAAGACAACCAAATCCGCCGTTAAGAAGGAGCCCAAGAAGGGCAAGTCCAAGGGCGACGGCAAAGCTACCGATGATCCCTCTGCCTCCGCTGCTGCTTCCGACGACTCAGATGCGGCGCTTTTTGATGATAAATCTCGAGCCCGCCGTCTTGCTGCCGAGGAAAATGATCACTCACTCGACGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCTTCACTGTCACAGCTCACTCGCAAGGATGCAGGCACTTATTTCAAATTTAATATGGAAGGACTAAATGAGGTACTGCCGGAGGGTTTGCCTTTGGGAATGGTCAAGGAGTTCGAGGATTCTATGCGAAGTGCTGTGCTTGTGCGGCAAAATTTTTTGGATCTTCGCGACAATTTCAGGCGTGTGGTTGATCCTTCATTGCTGTCGCCGGCTGGTTCAAAAATTAGAAAACAGATCGTATTGGATGGTCCGGTCAATAGTGGAAAGAGTATTGCGCTCGCCATGCTTGTTCACTGGGCTCGCGATGAAGGTTGGCTAGTTTTTTATGTTCCTAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTTTAAAAACGCTGAAACAGGACTTTGGGATACACCCGTTCAGGCTGAAGATGTTCTGAGAGATTTTCTGAAGTACAATGAGACCCGCTTAAGACAACTGCCATGTCAATTATCTGATCCTATACCATTGGGAGAGGGTGTTGGTGTCGGGATGAAGAAAGGTGCTGATTCCATGATGATGCCTGAGGGTTCAACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGCAGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAATTATCGCTTGTGAAAGATATTCCCGTGCTTTTCGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAATTTGAAGAACCAGTGACCGTTCGCTCTACTCGACCAATACATGCCAGAGAACTCGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGATGACATGATGGTTGGTGCTTTCTCTCATTCAACTGCTGTTGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCCTTAGGTGCACGTGTTAATTTCCCTCGCTACAATCTTGATGAAGCAGCTTCTGTTTTTCACTATTACCTCAGACAAAGATTGATACGCCGTGAAGTCTTCTCAGAAGATGCCTGGAAAAAGGTATACTATTTGTCAAATGGAAATGGAGCAGAAATCCGGTGGTTGGTACCATTTATGCGGTGACAGTGACACCAATGGGGCTAAGTTTCCTCCTCGCCTGTTCACATTGATGACTGGACACGGTACCATCGCTTAGAACTCATGCATATTTCTTCACTTGGAATTAGATATCCCTAACCCTCACAAGATGTGCGACATATCATAGGGCATTCTGGGCTAAAATACCGAGTCTGAGTGTTTGTATTTGTAAGTTTAGCGCGCGCACATCGGAGAAGTAACCTTTTCTACGCAACAATTTTTATTGTCTACTGGGCTACGCTTATCATCTTTTGTGTTCTTTTATTAATATATATTTTAAATACATTCTTCAATAAGGTGTTATCTTTTAAGGAAGAACTTGAGATGCCCAATTTAGCTGTTAGTTTTGCAGGCCATGTCCATACTCTTTAGTACTTATATATTGTATTTTTGATCTCTAG
Coding sequence (CDS)
ATGTTGCGATCAATTCTCAGAGCAGCAGCCGCCGCTGCCGCAGCCTCTAGACACCAGCCGTACAATCGGAATCCCTCTCCGATCCTATCTTTTACTTCAAATTACTCAGCTAAGACAACCAAATCCGCCGTTAAGAAGGAGCCCAAGAAGGGCAAGTCCAAGGGCGACGGCAAAGCTACCGATGATCCCTCTGCCTCCGCTGCTGCTTCCGACGACTCAGATGCGGCGCTTTTTGATGATAAATCTCGAGCCCGCCGTCTTGCTGCCGAGGAAAATGATCACTCACTCGACGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCTTCACTGTCACAGCTCACTCGCAAGGATGCAGGCACTTATTTCAAATTTAATATGGAAGGACTAAATGAGGTACTGCCGGAGGGTTTGCCTTTGGGAATGGTCAAGGAGTTCGAGGATTCTATGCGAAGTGCTGTGCTTGTGCGGCAAAATTTTTTGGATCTTCGCGACAATTTCAGGCGTGTGGTTGATCCTTCATTGCTGTCGCCGGCTGGTTCAAAAATTAGAAAACAGATCGTATTGGATGGTCCGGTCAATAGTGGAAAGAGTATTGCGCTCGCCATGCTTGTTCACTGGGCTCGCGATGAAGGTTGGCTAGTTTTTTATGTTCCTAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTTTAAAAACGCTGAAACAGGACTTTGGGATACACCCGTTCAGGCTGAAGATGTTCTGAGAGATTTTCTGAAGTACAATGAGACCCGCTTAAGACAACTGCCATGTCAATTATCTGATCCTATACCATTGGGAGAGGGTGTTGGTGTCGGGATGAAGAAAGGTGCTGATTCCATGATGATGCCTGAGGGTTCAACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGCAGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAATTATCGCTTGTGAAAGATATTCCCGTGCTTTTCGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAATTTGAAGAACCAGTGACCGTTCGCTCTACTCGACCAATACATGCCAGAGAACTCGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGATGACATGATGGTTGGTGCTTTCTCTCATTCAACTGCTGTTGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCCTTAGGTGCACGTGTTAATTTCCCTCGCTACAATCTTGATGAAGCAGCTTCTGTTTTTCACTATTACCTCAGACAAAGATTGATACGCCGTGAAGTCTTCTCAGAAGATGCCTGGAAAAAGGTATACTATTTGTCAAATGGAAATGGAGCAGAAATCCGGTGGTTGGTACCATTTATGCGGTGA
Protein sequence
MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKATDDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPAGSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLWDTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR
Homology
BLAST of CmaCh01G007140 vs. ExPASy TrEMBL
Match:
A0A6J1KAL1 (uncharacterized protein LOC111493189 OS=Cucurbita maxima OX=3661 GN=LOC111493189 PE=3 SV=1)
HSP 1 Score: 914.8 bits (2363), Expect = 1.4e-262
Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0
Query: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT
Sbjct: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
Query: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW
Sbjct: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR
Sbjct: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 459
BLAST of CmaCh01G007140 vs. ExPASy TrEMBL
Match:
A0A6J1GBS0 (uncharacterized protein LOC111452726 OS=Cucurbita moschata OX=3662 GN=LOC111452726 PE=3 SV=1)
HSP 1 Score: 888.3 bits (2294), Expect = 1.4e-254
Identity = 447/459 (97.39%), Postives = 449/459 (97.82%), Query Frame = 0
Query: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
MLRSILR AAAAA SRHQPYNRNPSPILSFTSNYSAKTTKSAVKK PKKGKSKGDGKAT
Sbjct: 1 MLRSILR--AAAAATSRHQPYNRNPSPILSFTSNYSAKTTKSAVKKAPKKGKSKGDGKAT 60
Query: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
DDPSASAAASDD DAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61 DDPSASAAASDDLDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
G+YFKFNMEGLNE LPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GSYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
GS IRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW
Sbjct: 181 GSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGV MKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDL 300
Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
YLRQRLIRRE FSEDAWKKVYYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 457
BLAST of CmaCh01G007140 vs. ExPASy TrEMBL
Match:
A0A5A7UZA8 (28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00370 PE=3 SV=1)
HSP 1 Score: 812.0 bits (2096), Expect = 1.3e-231
Identity = 412/459 (89.76%), Postives = 430/459 (93.68%), Query Frame = 0
Query: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
MLRSILR A AAAS+H NRNPSPILSFTSNYSAKTTK VKK KKGKS+ D KA
Sbjct: 1 MLRSILR---ATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKK-GKKGKSEADAKAG 60
Query: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
DDPSAS AASD+ DAAL DDK+RARRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61 DDPSAS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDA 120
Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
GTYFKFNMEGLNEVLPEGLP+GMVKEFE+S+RSAVLVRQ+FLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA 180
Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
GSKIRKQIVLDGPVN GKSIALAMLVHWAR+EGWLV YVPSGRRWTHGGFFFKN +TGLW
Sbjct: 181 GSKIRKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240
Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
DTPVQAEDVLRDFLKYNE RLRQLPCQ+S+PIPLGEGVGVGM KGADSM MP+GSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDL 300
Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
IDTGIKHTHAAVGVVVRLRKELSLVKDIPVL AIDQYNNWFTFSE+EEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHA 360
Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRY+LDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHY 420
Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
YLRQRLIRRE FSE+ WKK+YYLSNGNGAE+RWL P MR
Sbjct: 421 YLRQRLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454
BLAST of CmaCh01G007140 vs. ExPASy TrEMBL
Match:
A0A1S3C6G8 (28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026 PE=3 SV=1)
HSP 1 Score: 812.0 bits (2096), Expect = 1.3e-231
Identity = 412/459 (89.76%), Postives = 430/459 (93.68%), Query Frame = 0
Query: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
MLRSILR A AAAS+H NRNPSPILSFTSNYSAKTTK VKK KKGKS+ D KA
Sbjct: 1 MLRSILR---ATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKK-GKKGKSEADAKAG 60
Query: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
DDPSAS AASD+ DAAL DDK+RARRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61 DDPSAS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDA 120
Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
GTYFKFNMEGLNEVLPEGLP+GMVKEFE+S+RSAVLVRQ+FLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA 180
Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
GSKIRKQIVLDGPVN GKSIALAMLVHWAR+EGWLV YVPSGRRWTHGGFFFKN +TGLW
Sbjct: 181 GSKIRKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240
Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
DTPVQAEDVLRDFLKYNE RLRQLPCQ+S+PIPLGEGVGVGM KGADSM MP+GSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDL 300
Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
IDTGIKHTHAAVGVVVRLRKELSLVKDIPVL AIDQYNNWFTFSE+EEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHA 360
Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRY+LDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHY 420
Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
YLRQRLIRRE FSE+ WKK+YYLSNGNGAE+RWL P MR
Sbjct: 421 YLRQRLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454
BLAST of CmaCh01G007140 vs. ExPASy TrEMBL
Match:
A0A6J1DQ31 (28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022041 PE=3 SV=1)
HSP 1 Score: 809.7 bits (2090), Expect = 6.3e-231
Identity = 408/459 (88.89%), Postives = 427/459 (93.03%), Query Frame = 0
Query: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
MLRS+LR AAAAAS+H NRNPSPILS +SNYSAKT KS VKK KKGKS D KA
Sbjct: 1 MLRSVLR---AAAAASKHHLCNRNPSPILSLSSNYSAKTPKSTVKK-TKKGKSNADAKAA 60
Query: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
DDPSA+AAASDD DAAL DDKSRARRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKD+
Sbjct: 61 DDPSATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDS 120
Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
GTYFKFNMEGLNEVLPEGLPLGMVKEFE+SMRSAVLVR++FL+LRDNFRRVVDPSL SP
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPD 180
Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
G KIRKQIVLDGPVN GKS ALAMLVHWARDEGWLV YVPSGRRWTHGGFFFKN +TGLW
Sbjct: 181 GLKIRKQIVLDGPVNCGKSTALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240
Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
DTP+QAEDVLRDFLKYNETRLRQLPCQ+S+PIPLGEGVGVGM KGADSM MPEGSTLYDL
Sbjct: 241 DTPIQAEDVLRDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300
Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
IDTGIKHTHAAVGVV+RLRKELSLVKDIPVL AIDQYNNWFTFSE+EEPVTVRSTR IHA
Sbjct: 301 IDTGIKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRTIHA 360
Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRY+LDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHY 420
Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
YLRQRLIRRE F+EDAWKK+YYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREAFTEDAWKKIYYLSNGNGAEMRWLVPLMR 455
BLAST of CmaCh01G007140 vs. NCBI nr
Match:
XP_022998601.1 (uncharacterized protein LOC111493189 [Cucurbita maxima])
HSP 1 Score: 914.8 bits (2363), Expect = 2.9e-262
Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0
Query: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT
Sbjct: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
Query: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW
Sbjct: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR
Sbjct: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 459
BLAST of CmaCh01G007140 vs. NCBI nr
Match:
XP_022949341.1 (uncharacterized protein LOC111452726 [Cucurbita moschata])
HSP 1 Score: 888.3 bits (2294), Expect = 2.9e-254
Identity = 447/459 (97.39%), Postives = 449/459 (97.82%), Query Frame = 0
Query: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
MLRSILR AAAAA SRHQPYNRNPSPILSFTSNYSAKTTKSAVKK PKKGKSKGDGKAT
Sbjct: 1 MLRSILR--AAAAATSRHQPYNRNPSPILSFTSNYSAKTTKSAVKKAPKKGKSKGDGKAT 60
Query: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
DDPSASAAASDD DAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61 DDPSASAAASDDLDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
G+YFKFNMEGLNE LPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GSYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
GS IRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW
Sbjct: 181 GSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGV MKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDL 300
Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
YLRQRLIRRE FSEDAWKKVYYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 457
BLAST of CmaCh01G007140 vs. NCBI nr
Match:
XP_023525695.1 (uncharacterized protein LOC111789228 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 885.9 bits (2288), Expect = 1.4e-253
Identity = 445/459 (96.95%), Postives = 449/459 (97.82%), Query Frame = 0
Query: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
MLRSILR AAAAAASRHQPYNRNPSPILSFTSNYSAK TKSAVKK PKKGKSKGDGKAT
Sbjct: 1 MLRSILR--AAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKAT 60
Query: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
DDPSASAAASDD DAALFDDKSR+RRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61 DDPSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
GTYFKFNMEGLNE LPEGLPLGMVKEFEDSMRSA+LVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPA 180
Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
GS IRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFF+KNAETGLW
Sbjct: 181 GSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLW 240
Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGV MKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDL 300
Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
YLRQRLIRRE FSEDAWKKVYYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 457
BLAST of CmaCh01G007140 vs. NCBI nr
Match:
KAG6607352.1 (28S ribosomal protein S29, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 879.4 bits (2271), Expect = 1.3e-251
Identity = 444/459 (96.73%), Postives = 447/459 (97.39%), Query Frame = 0
Query: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
MLRSILR AAAAA SRHQPYNRNPSPILSFTSNYSAKTTKSAVKK PKKGKSKGDGKA
Sbjct: 1 MLRSILR--AAAAATSRHQPYNRNPSPILSFTSNYSAKTTKSAVKKAPKKGKSKGDGKAN 60
Query: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
DDPSAS AASDD DAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61 DDPSAS-AASDDLDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
GTYFKFNMEGLNE LPEGLPLGMVKEFEDSMRSA+LVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPA 180
Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
GS IRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFF+KNAETGLW
Sbjct: 181 GSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLW 240
Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGV MKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDL 300
Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
YLRQRLIRRE FSEDAWKKVYYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 456
BLAST of CmaCh01G007140 vs. NCBI nr
Match:
KAG7037027.1 (28S ribosomal protein S29, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 876.7 bits (2264), Expect = 8.7e-251
Identity = 443/459 (96.51%), Postives = 446/459 (97.17%), Query Frame = 0
Query: 1 MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
MLRSILR AA AA SRHQPYNRN SPILSFTSNYSAKTTKSAVKK PKKGKSKGDGKAT
Sbjct: 1 MLRSILR--AAVAATSRHQPYNRNTSPILSFTSNYSAKTTKSAVKKAPKKGKSKGDGKAT 60
Query: 61 DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
DDPSAS AASDD DAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61 DDPSAS-AASDDLDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
GTYFKFNMEGLNE LPEGLPLGMVKEFEDSMRSA+LVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPA 180
Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
GS IRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFF+KNAETGLW
Sbjct: 181 GSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLW 240
Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGV MKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDL 300
Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
YLRQRLIRRE FSEDAWKKVYYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 456
BLAST of CmaCh01G007140 vs. TAIR 10
Match:
AT1G16870.1 (mitochondrial 28S ribosomal protein S29-related )
HSP 1 Score: 570.1 bits (1468), Expect = 1.6e-162
Identity = 288/433 (66.51%), Postives = 340/433 (78.52%), Query Frame = 0
Query: 36 SAKTTKSAV----KKEPKKGKSKGDGKATDDPSASAAASDDSDAALFDD--KSRARRLAA 95
S+K+TKS++ K E KK K KG DP A+ A + AA DD RA+RLA
Sbjct: 53 SSKSTKSSITKTKKSEGKKSKPKG-----GDPGAAGAEEGEFGAAGGDDLEAGRAKRLAD 112
Query: 96 EENDHSLDVGPNGRPLFT-SASSLSQLTRKDAGTYFKFNMEGLNEVLPEGLPLGMVKEFE 155
+E SLDVGPNGRPLFT ++LSQLT KD G+YFKF+ L VLPEGL G+ EF
Sbjct: 113 DEKIPSLDVGPNGRPLFTPKDTTLSQLTHKDIGSYFKFDEAALKAVLPEGLASGIEDEFN 172
Query: 156 DSMRSAVLVRQNFLDLRDNFRRVVDPSL--LSPAGSKIRKQIVLDGPVNSGKSIALAMLV 215
+S R A+LVR+++L LRDNFRR+ DP + G K++KQIVLDGPV GKSIALAMLV
Sbjct: 173 ESWRPALLVRKSYLALRDNFRRIADPPMWPSDSKGVKLQKQIVLDGPVKCGKSIALAMLV 232
Query: 216 HWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLWDTPVQAEDVLRDFLKYNETRLRQLPC 275
HWARDEGWLV Y P GR WTHGG+F+KN TG WDTP+QAE++L+DF+K+NE+RLR+L C
Sbjct: 233 HWARDEGWLVLYAPKGRDWTHGGYFYKNPHTGFWDTPLQAENILKDFVKFNESRLRELRC 292
Query: 276 QLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDLIDTGIKHTHAAVGVVVRLRKELSLVK 335
++ DPI LGEG GVG KGAD+M +PE STLYDL+ GIK THAAV VVVRLRKELS+VK
Sbjct: 293 KIHDPIVLGEGAGVGYLKGADAMPIPEDSTLYDLVQMGIKSTHAAVNVVVRLRKELSVVK 352
Query: 336 DIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHST 395
D+PVL IDQYN+WFTFSEFEEPVT RS RPIHAREL V AFRSMMH+DMMVGAFSHST
Sbjct: 353 DVPVLIVIDQYNSWFTFSEFEEPVTPRSCRPIHARELTTVNAFRSMMHEDMMVGAFSHST 412
Query: 396 AVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYLRQRLIRREVFSEDAWKKVYYLSNG 455
AVGKLR+DLPDVP+ AR FPRY+LDEA +V +YYLRQRL+RREVF+E+ WKK+YYL+NG
Sbjct: 413 AVGKLRKDLPDVPVDARQQFPRYSLDEAEAVCYYYLRQRLVRREVFNEENWKKIYYLANG 472
Query: 456 NGAEIRWLVPFMR 460
NGAE+RWL PFMR
Sbjct: 473 NGAEMRWLAPFMR 480
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1KAL1 | 1.4e-262 | 100.00 | uncharacterized protein LOC111493189 OS=Cucurbita maxima OX=3661 GN=LOC111493189... | [more] |
A0A6J1GBS0 | 1.4e-254 | 97.39 | uncharacterized protein LOC111452726 OS=Cucurbita moschata OX=3662 GN=LOC1114527... | [more] |
A0A5A7UZA8 | 1.3e-231 | 89.76 | 28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
A0A1S3C6G8 | 1.3e-231 | 89.76 | 28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026... | [more] |
A0A6J1DQ31 | 6.3e-231 | 88.89 | 28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11... | [more] |
Match Name | E-value | Identity | Description | |
XP_022998601.1 | 2.9e-262 | 100.00 | uncharacterized protein LOC111493189 [Cucurbita maxima] | [more] |
XP_022949341.1 | 2.9e-254 | 97.39 | uncharacterized protein LOC111452726 [Cucurbita moschata] | [more] |
XP_023525695.1 | 1.4e-253 | 96.95 | uncharacterized protein LOC111789228 [Cucurbita pepo subsp. pepo] | [more] |
KAG6607352.1 | 1.3e-251 | 96.73 | 28S ribosomal protein S29, mitochondrial, partial [Cucurbita argyrosperma subsp.... | [more] |
KAG7037027.1 | 8.7e-251 | 96.51 | 28S ribosomal protein S29, mitochondrial [Cucurbita argyrosperma subsp. argyrosp... | [more] |
Match Name | E-value | Identity | Description | |
AT1G16870.1 | 1.6e-162 | 66.51 | mitochondrial 28S ribosomal protein S29-related | [more] |