CmaCh01G007140 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh01G007140
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	28S ribosomal protein S29, mitochondrial
Location	Cma_Chr01: 3741173 .. 3746690 (+)
RNA-Seq Expression	CmaCh01G007140
Synteny	CmaCh01G007140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACCCAAAACCTCGCGTTCAACTTCGTCCCCATCTCCGACTGGCGGAAAATGTTGCGATCAATTCTCAGAGCAGCAGCCGCCGCTGCCGCAGCCTCTAGACACCAGCCGTACAATCGGAATCCCTCTCCGATCCTATCTTTTACTTCAAATTACTCAGCTAAGACAACCAAATCCGCCGTTAAGAAGGAGCCCAAGAAGGGCAAGTCCAAGGGCGACGGCAAAGCTACCGATGATCCCTCTGCCTCCGCTGCTGCTTCCGACGACTCAGATGCGGCGCTTTTTGATGATAAATCTCGAGCCCGCCGTCTTGCTGCCGAGGAAAATGATCACTCACTCGACGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCTTCACTGTCACAGCTCACTCGCAAGGATGCAGGCACTTATTTCAAATTTAAGTACGTATGTTTTCTACATTGTTTATGAGTGACTGTTTATTGGAATATTTATTCGTTTCTTTACGAAATGGAAGTATGGAAGGACTAAATGAGGTACTGCCGGAGGGTTTGCCTTTGGGAATGGTCAAGGAGTTCGAGGATTCTATGCGAAGTGCTGTGCTTGTGCGGCAAAATTTTTTGGATCTTCGCGACAATTTCAGGCGTGTGGTTGATCCTTCATTGCTGTCGCCGGCTGGTATTGCTTTTCTTCTACTATCTTTTCTTTGATGGTGGGGGGGTTGAGCAAATGTATTCATGTTTTTTCTTGCTGCTATTTCAATTCAAACATTCAGGTTCAAAAATTAGAAAACAGATCGTATTGGATGGTCCGGTCAATAGTGGAAAGAGTATTGCGCTCGCCATGCTTGTTCACTGGGCTCGCGATGAAGGTTGGCTAGTTTTTTATGTTCCTAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTTTAAAAACGCTGAAACAGGACTTTGGGATACACCCGTTCAGGCTGAAGATGTTCTGAGAGTGAGGACCTTTTCCTGCTAATTAAGAGTTAGAAGTATGGGGTGCGTGTGTGTGTGTGTGTTTTTCAGGATCTTCTAGTGCATTTGTCATGAACATTGTATGTGCATCAAATGCCAGTTTAAGGGGTTGTTTTCTAATTCTATTGATAAATGTTAATTCTTACACACCCCATTGAGAATCTTGACAAGGGAAATGATGTTCGTGATCATGATTCTTTATTTGACTGGGAAATGTTTCATGCATAGTGTTTACTATTTTGTGATTAGCTTTCTGGAGATCAAGTGAGGACTGTGGATAATATGTGAAGCTGAAACAGTTGACATATTTATTTTTCATTGGCGGACTGGTTTTGACCAGGATTTTCTGAAGTACAATGAGACCCGCTTAAGACAACTGCCATGTCAATTATCTGATCCTATACCATTGGGAGAGGGTGTTGGTGTCGGGATGAAGAAAGGTGCTGATTCCATGATGATGCCTGAGGGTTCAACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGCAGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAATTATCGCTTGTGAAAGATATTCCCGTGCTTTTCGCTATTGATCAAGTGAGACACAAAAATACATCTTCCATTTCTTTGATTTCTAACATAAAGTTCCATTTCTTTGATTGCTTATTCGTGGCTGTTTCTTTTTGTTCAGTATAACAACTGGTTTACATTCAGTGAATTTGAAGAACCAGTGACCGTTCGCTCTACTCGACCAATACATGCCAGAGAACTCGCAATGGTTAGTACGAACTACTTGCTTGGATTGATTTTTCTTTTCTGTTTCTATTCGCTAACATTCATTGCAATACATTGGATGTTCCTGGAATATCTTGTTCAGTTTGTATGTGTTTGTGTTTTTTCTTGGTTCAACATCTTTTTACTTCCACCAAAATTACCTTGTGTGTTTAAGCATCGCATTGGAACTGGTCCCTACCTCCTGTCTTGAAACAGGGAGAGTATACATTATATGTGAAATGTTCTTTTATGTTTTTATTTTTTATGGAAAACAAACATCTTTTCATGGAAATCTTAGGTAGACTGCATTTTCAGCTTTCAGCATATACTCCTTGCTCATGGAACTACAGACTTTTTAATTATGATTATTGGGTCGGCCTTCTAATTTAGTTGGAATTAAACATTTTCCCCTGTTACCTACATTTAAATTTGCTAGCCTTTATACTTCCATTTTTATAGATTTGATTCCATTGCCTAAAAAATGTAATTTTTGTGGTAAAACTCATTTCCCTCATTTATTTTTCTGGTTCAATGTTCGGGGACTTAAAAACAACAAATGGAATGATTGATCCAAAAAGGAAACTGAAGTTGAAAGAACGATTAAATTAACAATTTTTGTGAATACAAATGAAGAAATATAATAGTTCCGCTTAGGATTTATTCTTCTCTCTTTTTTGGTAGATAGCTTTTTTGGGGAGTATTTATTTGTTATGACTGCACATATGGTTTCAGCCATGTTTTTTTCTTCCATATTTTCTCTTTTCTATCCTTTTCTTTTTCCTATATATCATTTAGATTAGTTTTGAAACCTACCATTCAATTTGACGTGAAATCTAATAGTCTTAGATTGCTGAAAAAGGGTTCAAGGCAGTTGGGAGTATTTAGGATCATGGAGTAAAATGAGTTGACCTAGTGACGAATAAGGGTTGATGTAAGTGGTTAAATATTTAGAGGGAATAGTTTCAAACTACGGTGACCATGGAGCTAAGATTTATTATCCTATGAGGTTCCTAAGCTTTCCTTTTATTTATTCTCAATAAATTCATCTCTTGATAGTTGGGCAGTTGACTTGTGAGACTAGTCAAGGTGCTACAATATGACTCAAACACTCATGGATTTATATATAAAAAAGATTATTCTGAATCCGGGAGTAAAGATAGAATATTAAGAGAGAATGTTGATGACTCATTTAGTGAATAGTATGTTATTGGCTGGGCACAACTCACCCTAGCTACAAATGAAAAAGTGAAGCTTATTTATAAAAGAAAAAATGAAAAAGAAAGCCAAAGAAGAAGGTAGTACCTTTACAATGCCAATAGTTCAGAAGTTTGGGTTGTAATTGTTGGAGGTCCAATATTTTAGGTTAGACAAGTTTGACCAAATTTATTCAATAAATCTCTAATAAGTTTTTAAATTTTCACTGCTATCTAACACAAGTGTTGTTTCCAAGTCATTGAAATTTAAAAATTGCATCTAAACTCTTGTAACTAAAAAGTCTCTTAACTTCTAATTTTGTATTTAATAGAATCCTTGAGATAATTTATTAGTTTCAAGAACTTGTTAGACTCAAAATTTATAGTTTAAGTACCTATAAATGCTTTTTAAAGTTTGGGCACCTATTAGACATAACATTGAAACTTTAGGAGCCTTTTAGATACAACTAATATTGAACTTTATGAGCCTTTTCGATACAATGTTGAATGATGAAACTTTTACCTTTGTATAATGATTTTGAAATTGTTCTTAAATTCTTATCTGTTTTGGTTTTTTTGTTTCTCAATCAATGATAAGAATTACAAATTTTTTCACAGGTAAAAGCTTTTAGGTCTATGATGCATGATGACATGATGGTTGGTGCTTTCTCTCATTCAACTGCTGTTGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCCTTAGGTGCACGTGTTAATTTCCCTCGCTACAATCTTGATGAAGCAGCTTCTGTTTTTCACTATTACCTCAGGTATGCTTATTTTGTTGTTATTTTGAAAAGACACTGATTTCATTGAAAAAAGAAAATTAAGAATGTTACATGAAGAGAAAAAGGAATCCTACAAAAGCTTTGATAGTTAAGGATTTAGAATAAGCCCCTATTTGGCTATTAGAGGAGATGGAGCATTTAGAAACGAAAAGCTCCTCTCATCGAATCTTATAGAGGCGATAGTAAGTTGCAGAAAGAGTTAGCTGTTGGATGGCATTGCCAACTCCCATCTCTTGATTTATATCCTAAAAAAAAATTTCTTTTGAAGTTCTGTAATTTTATAAGATATAAATGCAGTACTTGACTTAACAATACCTGATGAACTAGGCTTGTTTATTAGAGGGACCACAACCTACTTAGGAGAGTCCTCTAGACTCATTGAGTTGAAAGCAACCTATTACAGGTTAAAACCGTCCAAAATTTCTCTAGTACACTTCCTCGTAAGAGAACAATGGAAGAAACAAGTGATCATGTTCTGTATCTGTATGCTAATGGGTAGGACATCCTTTTGGCACCATATGTCTATTAATTTTTTTCTAGAGATAAAACCAGCCTCCTGAAAATCCAAGTATAACTAATTTTTCCTCAGAAACTTGTGTCGCAAATTCACAAGTCATAATACTAATTTGTTGCAGTGATCCGGATAACAGCTTATAATATTAGAAACAGAATTATTTCAGTGAAAAACCAAAGTATACAAGGGAGTAAAGTCAAGGGAAGTGTATGATCCTTTACTGCAATATATGCTGCTTTGAGAATAGTTTGAAAAGGAAGAGTACGAAATGCTCCTAGAAGAAAGAAAAACTACTGTCTTAAAACTATCAAGAGTTCTATCAATCCTTTGGAGAATCTGTTGTTTCAGATGAGAGTTTCATTGGCCAATTGAATAGGTAGGTAGGTACTTTCTATGACAGGACCACTTTTAACTGTAAAAGGTCATAGTAATTGACGTCTGGTTAAGTACAGTCTGATCTTTTATGTGAGGCTTTTCCTATGAACAACATTCAGTACTTTTGAGGGGATTGTTGTTTTCTTTATTTCTTTTTATTGAAATTCTTGAACTGTAACATGAATGTCACTCATCGCAATGTAGTTTGCAATCTGAAGTTGCAAAGGTATACCTGCTTGGTCGTTTGTATGAATGTTACCCAAGTTTGTGATTCTATTCGTAAAACGAACAGTAGAATGCATTGCTTAGTTAGTTGTTGATCATTTTCTTGACAGACAAAGATTGATACGCCGTGAAGTCTTCTCAGAAGATGCCTGGAAAAAGGTATACTATTTGTCAAATGGAAATGGAGCAGAAATCCGGTGGTTGGTACCATTTATGCGGTGACAGTGACACCAATGGGGCTAAGTTTCCTCCTCGCCTGTTCACATTGATGACTGGACACGGTACCATCGCTTAGAACTCATGCATATTTCTTCACTTGGAATTAGATATCCCTAACCCTCACAAGATGTGCGACATATCATAGGGCATTCTGGGCTAAAATACCGAGTCTGAGTGTTTGTATTTGTAAGTTTAGCGCGCGCACATCGGAGAAGTAACCTTTTCTACGCAACAATTTTTATTGTCTACTGGGCTACGCTTATCATCTTTTGTGTTCTTTTATTAATATATATTTTAAATACATTCTTCAATAAGGTGTTATCTTTTAAGGAAGAACTTGAGATGCCCAATTTAGCTGTTAGTTTTGCAGGCCATGTCCATACTCTTTAGTACTTATATATTGTATTTTTGATCTCTAG

mRNA sequence

AAAACCCAAAACCTCGCGTTCAACTTCGTCCCCATCTCCGACTGGCGGAAAATGTTGCGATCAATTCTCAGAGCAGCAGCCGCCGCTGCCGCAGCCTCTAGACACCAGCCGTACAATCGGAATCCCTCTCCGATCCTATCTTTTACTTCAAATTACTCAGCTAAGACAACCAAATCCGCCGTTAAGAAGGAGCCCAAGAAGGGCAAGTCCAAGGGCGACGGCAAAGCTACCGATGATCCCTCTGCCTCCGCTGCTGCTTCCGACGACTCAGATGCGGCGCTTTTTGATGATAAATCTCGAGCCCGCCGTCTTGCTGCCGAGGAAAATGATCACTCACTCGACGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCTTCACTGTCACAGCTCACTCGCAAGGATGCAGGCACTTATTTCAAATTTAATATGGAAGGACTAAATGAGGTACTGCCGGAGGGTTTGCCTTTGGGAATGGTCAAGGAGTTCGAGGATTCTATGCGAAGTGCTGTGCTTGTGCGGCAAAATTTTTTGGATCTTCGCGACAATTTCAGGCGTGTGGTTGATCCTTCATTGCTGTCGCCGGCTGGTTCAAAAATTAGAAAACAGATCGTATTGGATGGTCCGGTCAATAGTGGAAAGAGTATTGCGCTCGCCATGCTTGTTCACTGGGCTCGCGATGAAGGTTGGCTAGTTTTTTATGTTCCTAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTTTAAAAACGCTGAAACAGGACTTTGGGATACACCCGTTCAGGCTGAAGATGTTCTGAGAGATTTTCTGAAGTACAATGAGACCCGCTTAAGACAACTGCCATGTCAATTATCTGATCCTATACCATTGGGAGAGGGTGTTGGTGTCGGGATGAAGAAAGGTGCTGATTCCATGATGATGCCTGAGGGTTCAACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGCAGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAATTATCGCTTGTGAAAGATATTCCCGTGCTTTTCGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAATTTGAAGAACCAGTGACCGTTCGCTCTACTCGACCAATACATGCCAGAGAACTCGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGATGACATGATGGTTGGTGCTTTCTCTCATTCAACTGCTGTTGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCCTTAGGTGCACGTGTTAATTTCCCTCGCTACAATCTTGATGAAGCAGCTTCTGTTTTTCACTATTACCTCAGACAAAGATTGATACGCCGTGAAGTCTTCTCAGAAGATGCCTGGAAAAAGGTATACTATTTGTCAAATGGAAATGGAGCAGAAATCCGGTGGTTGGTACCATTTATGCGGTGACAGTGACACCAATGGGGCTAAGTTTCCTCCTCGCCTGTTCACATTGATGACTGGACACGGTACCATCGCTTAGAACTCATGCATATTTCTTCACTTGGAATTAGATATCCCTAACCCTCACAAGATGTGCGACATATCATAGGGCATTCTGGGCTAAAATACCGAGTCTGAGTGTTTGTATTTGTAAGTTTAGCGCGCGCACATCGGAGAAGTAACCTTTTCTACGCAACAATTTTTATTGTCTACTGGGCTACGCTTATCATCTTTTGTGTTCTTTTATTAATATATATTTTAAATACATTCTTCAATAAGGTGTTATCTTTTAAGGAAGAACTTGAGATGCCCAATTTAGCTGTTAGTTTTGCAGGCCATGTCCATACTCTTTAGTACTTATATATTGTATTTTTGATCTCTAG

Coding sequence (CDS)

ATGTTGCGATCAATTCTCAGAGCAGCAGCCGCCGCTGCCGCAGCCTCTAGACACCAGCCGTACAATCGGAATCCCTCTCCGATCCTATCTTTTACTTCAAATTACTCAGCTAAGACAACCAAATCCGCCGTTAAGAAGGAGCCCAAGAAGGGCAAGTCCAAGGGCGACGGCAAAGCTACCGATGATCCCTCTGCCTCCGCTGCTGCTTCCGACGACTCAGATGCGGCGCTTTTTGATGATAAATCTCGAGCCCGCCGTCTTGCTGCCGAGGAAAATGATCACTCACTCGACGTTGGCCCAAATGGCCGCCCTCTCTTTACCTCCGCATCTTCACTGTCACAGCTCACTCGCAAGGATGCAGGCACTTATTTCAAATTTAATATGGAAGGACTAAATGAGGTACTGCCGGAGGGTTTGCCTTTGGGAATGGTCAAGGAGTTCGAGGATTCTATGCGAAGTGCTGTGCTTGTGCGGCAAAATTTTTTGGATCTTCGCGACAATTTCAGGCGTGTGGTTGATCCTTCATTGCTGTCGCCGGCTGGTTCAAAAATTAGAAAACAGATCGTATTGGATGGTCCGGTCAATAGTGGAAAGAGTATTGCGCTCGCCATGCTTGTTCACTGGGCTCGCGATGAAGGTTGGCTAGTTTTTTATGTTCCTAGTGGGCGTCGGTGGACTCATGGAGGATTCTTCTTTAAAAACGCTGAAACAGGACTTTGGGATACACCCGTTCAGGCTGAAGATGTTCTGAGAGATTTTCTGAAGTACAATGAGACCCGCTTAAGACAACTGCCATGTCAATTATCTGATCCTATACCATTGGGAGAGGGTGTTGGTGTCGGGATGAAGAAAGGTGCTGATTCCATGATGATGCCTGAGGGTTCAACTTTATATGACTTAATTGATACTGGAATCAAGCACACTCATGCAGCTGTTGGGGTGGTAGTTCGTTTAAGAAAAGAATTATCGCTTGTGAAAGATATTCCCGTGCTTTTCGCTATTGATCAATATAACAACTGGTTTACATTCAGTGAATTTGAAGAACCAGTGACCGTTCGCTCTACTCGACCAATACATGCCAGAGAACTCGCAATGGTAAAAGCTTTTAGGTCTATGATGCATGATGACATGATGGTTGGTGCTTTCTCTCATTCAACTGCTGTTGGAAAGTTGCGTCAAGACTTGCCAGATGTTCCCTTAGGTGCACGTGTTAATTTCCCTCGCTACAATCTTGATGAAGCAGCTTCTGTTTTTCACTATTACCTCAGACAAAGATTGATACGCCGTGAAGTCTTCTCAGAAGATGCCTGGAAAAAGGTATACTATTTGTCAAATGGAAATGGAGCAGAAATCCGGTGGTTGGTACCATTTATGCGGTGA

Protein sequence

MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKATDDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDAGTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPAGSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLWDTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDLIDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR

Homology

[Close]

BLAST of CmaCh01G007140 vs. ExPASy TrEMBL
Match: A0A6J1KAL1 (uncharacterized protein LOC111493189 OS=Cucurbita maxima OX=3661 GN=LOC111493189 PE=3 SV=1)

HSP 1 Score: 914.8 bits (2363), Expect = 1.4e-262
Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0


Query: 1   MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
           MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT
Sbjct: 1   MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60

Query: 61  DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
           DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61  DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
           GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
           GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW
Sbjct: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360

Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
           RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420

Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
           YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR
Sbjct: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 459

[Close]

BLAST of CmaCh01G007140 vs. ExPASy TrEMBL
Match: A0A6J1GBS0 (uncharacterized protein LOC111452726 OS=Cucurbita moschata OX=3662 GN=LOC111452726 PE=3 SV=1)

HSP 1 Score: 888.3 bits (2294), Expect = 1.4e-254
Identity = 447/459 (97.39%), Postives = 449/459 (97.82%), Query Frame = 0


Query: 1   MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
           MLRSILR  AAAAA SRHQPYNRNPSPILSFTSNYSAKTTKSAVKK PKKGKSKGDGKAT
Sbjct: 1   MLRSILR--AAAAATSRHQPYNRNPSPILSFTSNYSAKTTKSAVKKAPKKGKSKGDGKAT 60

Query: 61  DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
           DDPSASAAASDD DAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61  DDPSASAAASDDLDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
           G+YFKFNMEGLNE LPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GSYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
           GS IRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW
Sbjct: 181 GSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGV MKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360

Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
           RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420

Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
           YLRQRLIRRE FSEDAWKKVYYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 457

[Close]

BLAST of CmaCh01G007140 vs. ExPASy TrEMBL
Match: A0A5A7UZA8 (28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00370 PE=3 SV=1)

HSP 1 Score: 812.0 bits (2096), Expect = 1.3e-231
Identity = 412/459 (89.76%), Postives = 430/459 (93.68%), Query Frame = 0


Query: 1   MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
           MLRSILR   A AAAS+H   NRNPSPILSFTSNYSAKTTK  VKK  KKGKS+ D KA 
Sbjct: 1   MLRSILR---ATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKK-GKKGKSEADAKAG 60

Query: 61  DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
           DDPSAS AASD+ DAAL DDK+RARRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61  DDPSAS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
           GTYFKFNMEGLNEVLPEGLP+GMVKEFE+S+RSAVLVRQ+FLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
           GSKIRKQIVLDGPVN GKSIALAMLVHWAR+EGWLV YVPSGRRWTHGGFFFKN +TGLW
Sbjct: 181 GSKIRKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNE RLRQLPCQ+S+PIPLGEGVGVGM KGADSM MP+GSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKDIPVL AIDQYNNWFTFSE+EEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHA 360

Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
           RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRY+LDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHY 420

Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
           YLRQRLIRRE FSE+ WKK+YYLSNGNGAE+RWL P MR
Sbjct: 421 YLRQRLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454

[Close]

BLAST of CmaCh01G007140 vs. ExPASy TrEMBL
Match: A0A1S3C6G8 (28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026 PE=3 SV=1)

HSP 1 Score: 812.0 bits (2096), Expect = 1.3e-231
Identity = 412/459 (89.76%), Postives = 430/459 (93.68%), Query Frame = 0


Query: 1   MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
           MLRSILR   A AAAS+H   NRNPSPILSFTSNYSAKTTK  VKK  KKGKS+ D KA 
Sbjct: 1   MLRSILR---ATAAASKHHFCNRNPSPILSFTSNYSAKTTKPPVKK-GKKGKSEADAKAG 60

Query: 61  DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
           DDPSAS AASD+ DAAL DDK+RARRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61  DDPSAS-AASDNLDAALSDDKTRARRLAAEENDTSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
           GTYFKFNMEGLNEVLPEGLP+GMVKEFE+S+RSAVLVRQ+FLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPMGMVKEFEESIRSAVLVRQSFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
           GSKIRKQIVLDGPVN GKSIALAMLVHWAR+EGWLV YVPSGRRWTHGGFFFKN +TGLW
Sbjct: 181 GSKIRKQIVLDGPVNCGKSIALAMLVHWAREEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNE RLRQLPCQ+S+PIPLGEGVGVGM KGADSM MP+GSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNEIRLRQLPCQISEPIPLGEGVGVGMAKGADSMRMPDGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKDIPVL AIDQYNNWFTFSE+EEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRPIHA 360

Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
           RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRY+LDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYSLDEAASVFHY 420

Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
           YLRQRLIRRE FSE+ WKK+YYLSNGNGAE+RWL P MR
Sbjct: 421 YLRQRLIRREAFSEEGWKKIYYLSNGNGAEMRWLAPLMR 454

[Close]

BLAST of CmaCh01G007140 vs. ExPASy TrEMBL
Match: A0A6J1DQ31 (28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111022041 PE=3 SV=1)

HSP 1 Score: 809.7 bits (2090), Expect = 6.3e-231
Identity = 408/459 (88.89%), Postives = 427/459 (93.03%), Query Frame = 0


Query: 1   MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
           MLRS+LR   AAAAAS+H   NRNPSPILS +SNYSAKT KS VKK  KKGKS  D KA 
Sbjct: 1   MLRSVLR---AAAAASKHHLCNRNPSPILSLSSNYSAKTPKSTVKK-TKKGKSNADAKAA 60

Query: 61  DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
           DDPSA+AAASDD DAAL DDKSRARRLAAEEND SLDVGPNGRPLFTSASSLSQLTRKD+
Sbjct: 61  DDPSATAAASDDLDAALSDDKSRARRLAAEENDPSLDVGPNGRPLFTSASSLSQLTRKDS 120

Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
           GTYFKFNMEGLNEVLPEGLPLGMVKEFE+SMRSAVLVR++FL+LRDNFRRVVDPSL SP 
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEESMRSAVLVRKSFLELRDNFRRVVDPSLRSPD 180

Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
           G KIRKQIVLDGPVN GKS ALAMLVHWARDEGWLV YVPSGRRWTHGGFFFKN +TGLW
Sbjct: 181 GLKIRKQIVLDGPVNCGKSTALAMLVHWARDEGWLVLYVPSGRRWTHGGFFFKNPQTGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
           DTP+QAEDVLRDFLKYNETRLRQLPCQ+S+PIPLGEGVGVGM KGADSM MPEGSTLYDL
Sbjct: 241 DTPIQAEDVLRDFLKYNETRLRQLPCQISEPIPLGEGVGVGMMKGADSMTMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
           IDTGIKHTHAAVGVV+RLRKELSLVKDIPVL AIDQYNNWFTFSE+EEPVTVRSTR IHA
Sbjct: 301 IDTGIKHTHAAVGVVIRLRKELSLVKDIPVLIAIDQYNNWFTFSEYEEPVTVRSTRTIHA 360

Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
           RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPL ARVNFPRY+LDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLDARVNFPRYSLDEAASVFHY 420

Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
           YLRQRLIRRE F+EDAWKK+YYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREAFTEDAWKKIYYLSNGNGAEMRWLVPLMR 455

[Close]

BLAST of CmaCh01G007140 vs. NCBI nr
Match: XP_022998601.1 (uncharacterized protein LOC111493189 [Cucurbita maxima])

HSP 1 Score: 914.8 bits (2363), Expect = 2.9e-262
Identity = 459/459 (100.00%), Postives = 459/459 (100.00%), Query Frame = 0


Query: 1   MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
           MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT
Sbjct: 1   MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60

Query: 61  DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
           DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61  DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
           GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
           GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW
Sbjct: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360

Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
           RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420

Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
           YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR
Sbjct: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 459

[Close]

BLAST of CmaCh01G007140 vs. NCBI nr
Match: XP_022949341.1 (uncharacterized protein LOC111452726 [Cucurbita moschata])

HSP 1 Score: 888.3 bits (2294), Expect = 2.9e-254
Identity = 447/459 (97.39%), Postives = 449/459 (97.82%), Query Frame = 0


Query: 1   MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
           MLRSILR  AAAAA SRHQPYNRNPSPILSFTSNYSAKTTKSAVKK PKKGKSKGDGKAT
Sbjct: 1   MLRSILR--AAAAATSRHQPYNRNPSPILSFTSNYSAKTTKSAVKKAPKKGKSKGDGKAT 60

Query: 61  DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
           DDPSASAAASDD DAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61  DDPSASAAASDDLDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
           G+YFKFNMEGLNE LPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GSYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
           GS IRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW
Sbjct: 181 GSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGV MKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360

Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
           RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420

Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
           YLRQRLIRRE FSEDAWKKVYYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 457

[Close]

BLAST of CmaCh01G007140 vs. NCBI nr
Match: XP_023525695.1 (uncharacterized protein LOC111789228 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 885.9 bits (2288), Expect = 1.4e-253
Identity = 445/459 (96.95%), Postives = 449/459 (97.82%), Query Frame = 0


Query: 1   MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
           MLRSILR  AAAAAASRHQPYNRNPSPILSFTSNYSAK TKSAVKK PKKGKSKGDGKAT
Sbjct: 1   MLRSILR--AAAAAASRHQPYNRNPSPILSFTSNYSAKATKSAVKKAPKKGKSKGDGKAT 60

Query: 61  DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
           DDPSASAAASDD DAALFDDKSR+RRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61  DDPSASAAASDDLDAALFDDKSRSRRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
           GTYFKFNMEGLNE LPEGLPLGMVKEFEDSMRSA+LVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
           GS IRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFF+KNAETGLW
Sbjct: 181 GSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGV MKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360

Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
           RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420

Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
           YLRQRLIRRE FSEDAWKKVYYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 457

[Close]

BLAST of CmaCh01G007140 vs. NCBI nr
Match: KAG6607352.1 (28S ribosomal protein S29, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 879.4 bits (2271), Expect = 1.3e-251
Identity = 444/459 (96.73%), Postives = 447/459 (97.39%), Query Frame = 0


Query: 1   MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
           MLRSILR  AAAAA SRHQPYNRNPSPILSFTSNYSAKTTKSAVKK PKKGKSKGDGKA 
Sbjct: 1   MLRSILR--AAAAATSRHQPYNRNPSPILSFTSNYSAKTTKSAVKKAPKKGKSKGDGKAN 60

Query: 61  DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
           DDPSAS AASDD DAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61  DDPSAS-AASDDLDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
           GTYFKFNMEGLNE LPEGLPLGMVKEFEDSMRSA+LVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
           GS IRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFF+KNAETGLW
Sbjct: 181 GSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGV MKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360

Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
           RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420

Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
           YLRQRLIRRE FSEDAWKKVYYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 456

[Close]

BLAST of CmaCh01G007140 vs. NCBI nr
Match: KAG7037027.1 (28S ribosomal protein S29, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 876.7 bits (2264), Expect = 8.7e-251
Identity = 443/459 (96.51%), Postives = 446/459 (97.17%), Query Frame = 0


Query: 1   MLRSILRAAAAAAAASRHQPYNRNPSPILSFTSNYSAKTTKSAVKKEPKKGKSKGDGKAT 60
           MLRSILR  AA AA SRHQPYNRN SPILSFTSNYSAKTTKSAVKK PKKGKSKGDGKAT
Sbjct: 1   MLRSILR--AAVAATSRHQPYNRNTSPILSFTSNYSAKTTKSAVKKAPKKGKSKGDGKAT 60

Query: 61  DDPSASAAASDDSDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120
           DDPSAS AASDD DAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA
Sbjct: 61  DDPSAS-AASDDLDAALFDDKSRARRLAAEENDHSLDVGPNGRPLFTSASSLSQLTRKDA 120

Query: 121 GTYFKFNMEGLNEVLPEGLPLGMVKEFEDSMRSAVLVRQNFLDLRDNFRRVVDPSLLSPA 180
           GTYFKFNMEGLNE LPEGLPLGMVKEFEDSMRSA+LVRQNFLDLRDNFRRVVDPSLLSPA
Sbjct: 121 GTYFKFNMEGLNEALPEGLPLGMVKEFEDSMRSALLVRQNFLDLRDNFRRVVDPSLLSPA 180

Query: 181 GSKIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLW 240
           GS IRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFF+KNAETGLW
Sbjct: 181 GSNIRKQIVLDGPVNSGKSIALAMLVHWARDEGWLVFYVPSGRRWTHGGFFYKNAETGLW 240

Query: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDL 300
           DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGV MKKGADSMMMPEGSTLYDL
Sbjct: 241 DTPVQAEDVLRDFLKYNETRLRQLPCQLSDPIPLGEGVGVRMKKGADSMMMPEGSTLYDL 300

Query: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360
           IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA
Sbjct: 301 IDTGIKHTHAAVGVVVRLRKELSLVKDIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHA 360

Query: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420
           RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY
Sbjct: 361 RELAMVKAFRSMMHDDMMVGAFSHSTAVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHY 420

Query: 421 YLRQRLIRREVFSEDAWKKVYYLSNGNGAEIRWLVPFMR 460
           YLRQRLIRRE FSEDAWKKVYYLSNGNGAE+RWLVP MR
Sbjct: 421 YLRQRLIRREAFSEDAWKKVYYLSNGNGAEMRWLVPLMR 456

[Close]

BLAST of CmaCh01G007140 vs. TAIR 10
Match: AT1G16870.1 (mitochondrial 28S ribosomal protein S29-related )

HSP 1 Score: 570.1 bits (1468), Expect = 1.6e-162
Identity = 288/433 (66.51%), Postives = 340/433 (78.52%), Query Frame = 0


Query: 36  SAKTTKSAV----KKEPKKGKSKGDGKATDDPSASAAASDDSDAALFDD--KSRARRLAA 95
           S+K+TKS++    K E KK K KG      DP A+ A   +  AA  DD    RA+RLA 
Sbjct: 53  SSKSTKSSITKTKKSEGKKSKPKG-----GDPGAAGAEEGEFGAAGGDDLEAGRAKRLAD 112

Query: 96  EENDHSLDVGPNGRPLFT-SASSLSQLTRKDAGTYFKFNMEGLNEVLPEGLPLGMVKEFE 155
           +E   SLDVGPNGRPLFT   ++LSQLT KD G+YFKF+   L  VLPEGL  G+  EF 
Sbjct: 113 DEKIPSLDVGPNGRPLFTPKDTTLSQLTHKDIGSYFKFDEAALKAVLPEGLASGIEDEFN 172

Query: 156 DSMRSAVLVRQNFLDLRDNFRRVVDPSL--LSPAGSKIRKQIVLDGPVNSGKSIALAMLV 215
           +S R A+LVR+++L LRDNFRR+ DP +      G K++KQIVLDGPV  GKSIALAMLV
Sbjct: 173 ESWRPALLVRKSYLALRDNFRRIADPPMWPSDSKGVKLQKQIVLDGPVKCGKSIALAMLV 232

Query: 216 HWARDEGWLVFYVPSGRRWTHGGFFFKNAETGLWDTPVQAEDVLRDFLKYNETRLRQLPC 275
           HWARDEGWLV Y P GR WTHGG+F+KN  TG WDTP+QAE++L+DF+K+NE+RLR+L C
Sbjct: 233 HWARDEGWLVLYAPKGRDWTHGGYFYKNPHTGFWDTPLQAENILKDFVKFNESRLRELRC 292

Query: 276 QLSDPIPLGEGVGVGMKKGADSMMMPEGSTLYDLIDTGIKHTHAAVGVVVRLRKELSLVK 335
           ++ DPI LGEG GVG  KGAD+M +PE STLYDL+  GIK THAAV VVVRLRKELS+VK
Sbjct: 293 KIHDPIVLGEGAGVGYLKGADAMPIPEDSTLYDLVQMGIKSTHAAVNVVVRLRKELSVVK 352

Query: 336 DIPVLFAIDQYNNWFTFSEFEEPVTVRSTRPIHARELAMVKAFRSMMHDDMMVGAFSHST 395
           D+PVL  IDQYN+WFTFSEFEEPVT RS RPIHAREL  V AFRSMMH+DMMVGAFSHST
Sbjct: 353 DVPVLIVIDQYNSWFTFSEFEEPVTPRSCRPIHARELTTVNAFRSMMHEDMMVGAFSHST 412

Query: 396 AVGKLRQDLPDVPLGARVNFPRYNLDEAASVFHYYLRQRLIRREVFSEDAWKKVYYLSNG 455
           AVGKLR+DLPDVP+ AR  FPRY+LDEA +V +YYLRQRL+RREVF+E+ WKK+YYL+NG
Sbjct: 413 AVGKLRKDLPDVPVDARQQFPRYSLDEAEAVCYYYLRQRLVRREVFNEENWKKIYYLANG 472

Query: 456 NGAEIRWLVPFMR 460
           NGAE+RWL PFMR
Sbjct: 473 NGAEMRWLAPFMR 480

The following BLAST results are available for this feature:

BLAST of CmaCh01G007140 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh01G007140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KAL1	1.4e-262	100.00	uncharacterized protein LOC111493189 OS=Cucurbita maxima OX=3661 GN=LOC111493189...	[more]
A0A6J1GBS0	1.4e-254	97.39	uncharacterized protein LOC111452726 OS=Cucurbita moschata OX=3662 GN=LOC1114527...	[more]
A0A5A7UZA8	1.3e-231	89.76	28S ribosomal protein S29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C6G8	1.3e-231	89.76	28S ribosomal protein S29, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103497026...	[more]
A0A6J1DQ31	6.3e-231	88.89	28S ribosomal protein S29, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of CmaCh01G007140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022998601.1	2.9e-262	100.00	uncharacterized protein LOC111493189 [Cucurbita maxima]	[more]
XP_022949341.1	2.9e-254	97.39	uncharacterized protein LOC111452726 [Cucurbita moschata]	[more]
XP_023525695.1	1.4e-253	96.95	uncharacterized protein LOC111789228 [Cucurbita pepo subsp. pepo]	[more]
KAG6607352.1	1.3e-251	96.73	28S ribosomal protein S29, mitochondrial, partial [Cucurbita argyrosperma subsp....	[more]
KAG7037027.1	8.7e-251	96.51	28S ribosomal protein S29, mitochondrial [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of CmaCh01G007140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16870.1	1.6e-162	66.51	mitochondrial 28S ribosomal protein S29-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019368	Ribosomal protein S23/S29, mitochondrial	PFAM	PF10236	DAP3	coord: 181..381 e-value: 1.6E-29 score: 103.0
IPR019368	Ribosomal protein S23/S29, mitochondrial	PANTHER	PTHR12810	MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S29	coord: 4..458
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G007140.1	CmaCh01G007140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome