CmaCh00G004250 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G004250
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	GATA transcription factor
Location	Cma_Chr00: 32658174 .. 32659327 (-)
RNA-Seq Expression	CmaCh00G004250
Synteny	CmaCh00G004250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTTGGTTGTATATATTTAAGATTGGATTTTCAGATCCCGCTTGCGGCCACTGCATTTGTGTCGGTTTGATTCCTATTTCATCCTCTCATCCCTTCCTCTCTAATTCTTTCCCTCTGCATTTTCCTTTCAATACTTCGCCTTCCCTCCGATCTCTGCCATTTTTTTCACTCTACTCTGATCTCTTTCTCCCCTTTCGTTTCCGCCATTGATTTTCCTTTCTGGGTTTGATCTGTTTCTCAGATCCCCCTTCTCGATCTCGCTTCCCCTGTTTCCTCTGTCTCTGATCGACTCTTTGCGAGATACCCATCGTTTGATTCTCTGATCTCTAATCGTTTCACTCACTACCCACTTCGAGTTTCGTGTTTTTGAAATCTGGGTTTTTCTTAGATCTCTCCAATACCAACGGATGATGATGGATCCAAGCGATAGAGTGAGTATTCGCCTCTGTTTTTGAGATTTTCCTTCCTTTTTCACTTCAGTTTCTGATCGGTGGTTACTAATGTTGTAGGTATCGGAATCGGAGGACATATCCAGCAAAAACTCCGGCGGGGTATCATCGGAGGAGAGTCAAGTGAACGAGCAGAACAAGAAGACCTGTGCTGACTGCGGCACTTCAAAAACCCCCTTATGGAGAGGCGGCCCAGCTGGTCCAAAGGTGATTTCATTGATCGATCTCAACTCTAATGGAGTTCATAAGCTATATCTCTCGATCCTTGTCTCAGATTTTTGTTTTTTCTGTCTGATTTCGAACAGTCTCTCTGCAATGCGTGTGGGATTAGAAGTAGGAAGAAGAGGAGAGCGATTTTGGGGTTAAGCAAAGGAGTTGTTGAGGATAAGAAGAACAAAAGGAGCAATAGTTGCAACAATATTAGCAATAGTAAGCTAAGAGATAGCTTGAAACAGAGGCTCATGGCTTTGGGGAGAGAGGTTTTGATGCAGAGATATAGCGTTGAGAGGCAGAGGAAGAAGCTGGGAGAGGAAGAACAAGCTGCTGTGTTGTTAATGGCGCTCTCATATGGGTCTGTTTTCGCTTGAAAACAGCCATTAACGAAGATCAGAAAGAGCAATAAAGAAGAAACCAAAATCTAACCTAGAAGAAGAAGTATATTGAGTGAAATTCTGTTAGTTCTTTATTATTCCTATAGATCTCTC

mRNA sequence

CTTTTGGTTGTATATATTTAAGATTGGATTTTCAGATCCCGCTTGCGGCCACTGCATTTGTGTCGGTTTGATTCCTATTTCATCCTCTCATCCCTTCCTCTCTAATTCTTTCCCTCTGCATTTTCCTTTCAATACTTCGCCTTCCCTCCGATCTCTGCCATTTTTTTCACTCTACTCTGATCTCTTTCTCCCCTTTCGTTTCCGCCATTGATTTTCCTTTCTGGGTTTGATCTGTTTCTCAGATCCCCCTTCTCGATCTCGCTTCCCCTGTTTCCTCTGTCTCTGATCGACTCTTTGCGAGATACCCATCGTTTGATTCTCTGATCTCTAATCGTTTCACTCACTACCCACTTCGAGTTTCGTGTTTTTGAAATCTGGGTTTTTCTTAGATCTCTCCAATACCAACGGATGATGATGGATCCAAGCGATAGAGTATCGGAATCGGAGGACATATCCAGCAAAAACTCCGGCGGGGTATCATCGGAGGAGAGTCAAGTGAACGAGCAGAACAAGAAGACCTGTGCTGACTGCGGCACTTCAAAAACCCCCTTATGGAGAGGCGGCCCAGCTGGTCCAAAGTCTCTCTGCAATGCGTGTGGGATTAGAAGTAGGAAGAAGAGGAGAGCGATTTTGGGGTTAAGCAAAGGAGTTGTTGAGGATAAGAAGAACAAAAGGAGCAATAGTTGCAACAATATTAGCAATAGTAAGCTAAGAGATAGCTTGAAACAGAGGCTCATGGCTTTGGGGAGAGAGGTTTTGATGCAGAGATATAGCGTTGAGAGGCAGAGGAAGAAGCTGGGAGAGGAAGAACAAGCTGCTGTGTTGTTAATGGCGCTCTCATATGGGTCTGTTTTCGCTTGAAAACAGCCATTAACGAAGATCAGAAAGAGCAATAAAGAAGAAACCAAAATCTAACCTAGAAGAAGAAGTATATTGAGTGAAATTCTGTTAGTTCTTTATTATTCCTATAGATCTCTC

Coding sequence (CDS)

ATGATGATGGATCCAAGCGATAGAGTATCGGAATCGGAGGACATATCCAGCAAAAACTCCGGCGGGGTATCATCGGAGGAGAGTCAAGTGAACGAGCAGAACAAGAAGACCTGTGCTGACTGCGGCACTTCAAAAACCCCCTTATGGAGAGGCGGCCCAGCTGGTCCAAAGTCTCTCTGCAATGCGTGTGGGATTAGAAGTAGGAAGAAGAGGAGAGCGATTTTGGGGTTAAGCAAAGGAGTTGTTGAGGATAAGAAGAACAAAAGGAGCAATAGTTGCAACAATATTAGCAATAGTAAGCTAAGAGATAGCTTGAAACAGAGGCTCATGGCTTTGGGGAGAGAGGTTTTGATGCAGAGATATAGCGTTGAGAGGCAGAGGAAGAAGCTGGGAGAGGAAGAACAAGCTGCTGTGTTGTTAATGGCGCTCTCATATGGGTCTGTTTTCGCTTGA

Protein sequence

MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQRYSVERQRKKLGEEEQAAVLLMALSYGSVFA

Homology

[Close]

BLAST of CmaCh00G004250 vs. ExPASy Swiss-Prot
Match: Q8LG10 (GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 2.0e-34
Identity = 91/153 (59.48%), Postives = 107/153 (69.93%), Query Frame = 0


Query: 2   MMDPSDRVSESEDISSKNSGGVSSEESQVNEQN------KKTCADCGTSKTPLWRGGPAG 61
           M+DP+++V +SE + SK +   + EE   +  N      KK+CA CGTSKTPLWRGGPAG
Sbjct: 1   MLDPTEKVIDSESMESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAG 60

Query: 62  PKSLCNACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGRE 121
           PKSLCNACGIR+RKKRR ++       EDKK K  N      N K  DSLKQRLM LGRE
Sbjct: 61  PKSLCNACGIRNRKKRRTLISNRS---EDKKKKSHN-----RNPKFGDSLKQRLMELGRE 120

Query: 122 VLMQRYSVERQRK-KLGEEEQAAVLLMALSYGS 148
           V+MQR + E QR+ KLGEEEQAAVLLMALSY S
Sbjct: 121 VMMQRSTAENQRRNKLGEEEQAAVLLMALSYAS 145

[Close]

BLAST of CmaCh00G004250 vs. ExPASy Swiss-Prot
Match: Q9FJ10 (GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.3e-32
Identity = 86/151 (56.95%), Postives = 109/151 (72.19%), Query Frame = 0


Query: 2   MMDPSDRV--SESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSL 61
           M+D S++V   +SE + ++    +    + VN++ KKTCADCGTSKTPLWRGGP GPKSL
Sbjct: 1   MLDHSEKVLLVDSETMKTRAEDMIEQNNTSVNDK-KKTCADCGTSKTPLWRGGPVGPKSL 60

Query: 62  CNACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQ 121
           CNACGIR+RKKRR       G  ++KK K+S+S     N K  +SLKQ LM LG   + +
Sbjct: 61  CNACGIRNRKKRRG------GTEDNKKLKKSSSGG--GNRKFGESLKQSLMDLG---IRK 120

Query: 122 RYSVERQRKKLGEEEQAAVLLMALSYGSVFA 151
           R +VE+QR+KLGEEEQAAVLLMALSYGSV+A
Sbjct: 121 RSTVEKQRQKLGEEEQAAVLLMALSYGSVYA 139

[Close]

BLAST of CmaCh00G004250 vs. ExPASy Swiss-Prot
Match: Q9LIB5 (GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.9e-24
Identity = 79/177 (44.63%), Postives = 105/177 (59.32%), Query Frame = 0


Query: 11  ESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKK 70
           ++E+ SS  SGG SS     +   K+TC DCGT +TPLWRGGPAGPKSLCNACGI+SRKK
Sbjct: 22  DNENCSSSGSGGGSS-----SGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKK 81

Query: 71  RRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRL--------------------- 130
           R+A LG+     E+KK  R ++CNN  N   R++ K ++                     
Sbjct: 82  RQAALGMRS---EEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKR 141

Query: 131 -------------MALGREV-LMQRYSVERQR--KKLGEEEQAAVLLMALSYGSVFA 151
                        + LG +V +M+R +VE++R  +KLGEEE+AAVLLMALS  SV+A
Sbjct: 142 SSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190

[Close]

BLAST of CmaCh00G004250 vs. ExPASy Swiss-Prot
Match: Q8LC59 (GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 6.8e-14
Identity = 49/115 (42.61%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 36  KTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNN 95
           + C++C T+KTP+WRGGP GPKSLCNACGIR RK+RR+ L L   ++   K+  S   N 
Sbjct: 26  RCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSEL-LGIHIIRSHKSLASKKINL 85

Query: 96  ISNSKLRDSLKQRLMALGREVLMQRYSVERQRKKLGEEEQAAVLLMALSYGSVFA 151
           +S+S    ++K                   +R+ L EEEQAA+ L+ LS  SV A
Sbjct: 86  LSSSHGGVAVK-------------------KRRSLKEEEQAALCLLLLSCSSVLA 120

[Close]

BLAST of CmaCh00G004250 vs. ExPASy Swiss-Prot
Match: Q9SZI6 (Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.9e-12
Identity = 62/181 (34.25%), Postives = 86/181 (47.51%), Query Frame = 0


Query: 10  SESEDISSKNSGGVSSEESQVNEQNK---KTCADCGTSKTPLWRGGPAGPKSLCNACGIR 69
           S  +  ++  S  +S+ E Q    N    + C+DC T+KTPLWR GP GPKSLCNACGIR
Sbjct: 170 SSKQHTNNDQSSNLSNSERQNGYNNDCVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIR 229

Query: 70  SRKKRR---------AILGLSKGVVEDK---KNKRSNSCNNI-SNSKLRDSLKQRLMALG 129
            RK RR         A+ G+S  V++ K   KNK SN    I S   L+ +  +R++ L 
Sbjct: 230 QRKARRAAMATATATAVSGVSPPVMKKKMQNKNKISNGVYKILSPLPLKVNTCKRMITLE 289

Query: 130 REVLMQRYSVERQRKKLG--------------------------EEEQAAVLLMALSYGS 149
              L +    +     L                           +E++AA+LLMALS+G 
Sbjct: 290 ETALAEDLETQSNSTMLSSSDNIYFDDLALLLSKSSAYQQVFPQDEKEAAILLMALSHGM 349

[Close]

BLAST of CmaCh00G004250 vs. ExPASy TrEMBL
Match: A0A6J1IG45 (GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111474299 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.2e-72
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR 120
           NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR 120

Query: 121 YSVERQRKKLGEEEQAAVLLMALSYGSVFA 151
           YSVERQRKKLGEEEQAAVLLMALSYGSVFA
Sbjct: 121 YSVERQRKKLGEEEQAAVLLMALSYGSVFA 150

[Close]

BLAST of CmaCh00G004250 vs. ExPASy TrEMBL
Match: A0A6J1GF07 (GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111453593 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.3e-71
Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR 120
           NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR 120

Query: 121 YSVERQRKKLGEEEQAAVLLMALSYGSVFA 151
            SVERQRKKLGEEEQAAVLLMALSYGSVFA
Sbjct: 121 SSVERQRKKLGEEEQAAVLLMALSYGSVFA 150

[Close]

BLAST of CmaCh00G004250 vs. ExPASy TrEMBL
Match: A0A6J1IY32 (GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111479506 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.3e-63
Identity = 136/149 (91.28%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 2   MMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN 61
           MMDPSDR SESEDIS KNSGGVSSEES VNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN
Sbjct: 1   MMDPSDRGSESEDISGKNSGGVSSEESIVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN 60

Query: 62  ACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQRY 121
           ACGIRSRKKRRAILGL++GVVEDKK+K+S+S NNIS+SKLRDSLKQRL+ALGREVLMQR 
Sbjct: 61  ACGIRSRKKRRAILGLNRGVVEDKKSKKSSS-NNISHSKLRDSLKQRLLALGREVLMQRS 120

Query: 122 SVERQRKKLGEEEQAAVLLMALSYGSVFA 151
           SVERQRKKLGEEEQAAVLLMALSYGSV+A
Sbjct: 121 SVERQRKKLGEEEQAAVLLMALSYGSVYA 148

[Close]

BLAST of CmaCh00G004250 vs. ExPASy TrEMBL
Match: A0A6J1GVX6 (GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111458032 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.3e-63
Identity = 136/149 (91.28%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 2   MMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN 61
           MMDPSDR SESEDIS KNSGGVSSEES VNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN
Sbjct: 1   MMDPSDRGSESEDISGKNSGGVSSEESIVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN 60

Query: 62  ACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQRY 121
           ACGIRSRKKRRAILGL++GVVEDKK+K+S+S NNIS+SKLRDSLKQRL+ALGREVLMQR 
Sbjct: 61  ACGIRSRKKRRAILGLNRGVVEDKKSKKSSS-NNISHSKLRDSLKQRLLALGREVLMQRS 120

Query: 122 SVERQRKKLGEEEQAAVLLMALSYGSVFA 151
           SVERQRKKLGEEEQAAVLLMALSYGSV+A
Sbjct: 121 SVERQRKKLGEEEQAAVLLMALSYGSVYA 148

[Close]

BLAST of CmaCh00G004250 vs. ExPASy TrEMBL
Match: A0A6J1C7L6 (GATA transcription factor 16-like OS=Momordica charantia OX=3673 GN=LOC111009131 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.1e-62
Identity = 134/152 (88.16%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MM+DPSDR SESED+S KNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMLDPSDRGSESEDMSGKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNS--CNNISNSKLRDSLKQRLMALGREVLM 120
           NACGIRSRKKRRAILGLSKGVVEDKK+K+S+S   +N S+S+LRDSLKQRL+ALGREVLM
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKSKKSSSNISSNSSSSRLRDSLKQRLLALGREVLM 120

Query: 121 QRYSVERQRKKLGEEEQAAVLLMALSYGSVFA 151
           QR +VERQRKKLGEEEQAAVLLMALSYGSV+A
Sbjct: 121 QRSTVERQRKKLGEEEQAAVLLMALSYGSVYA 152

[Close]

BLAST of CmaCh00G004250 vs. NCBI nr
Match: XP_022972130.1 (GATA transcription factor 15-like [Cucurbita maxima] >XP_022975215.1 GATA transcription factor 15-like [Cucurbita maxima] >XP_022975216.1 GATA transcription factor 15-like [Cucurbita maxima] >XP_022975217.1 GATA transcription factor 15-like [Cucurbita maxima] >XP_022975219.1 GATA transcription factor 15-like [Cucurbita maxima])

HSP 1 Score: 282.3 bits (721), Expect = 2.4e-72
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 0


Query: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR 120
           NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR 120

Query: 121 YSVERQRKKLGEEEQAAVLLMALSYGSVFA 151
           YSVERQRKKLGEEEQAAVLLMALSYGSVFA
Sbjct: 121 YSVERQRKKLGEEEQAAVLLMALSYGSVFA 150

[Close]

BLAST of CmaCh00G004250 vs. NCBI nr
Match: XP_022950506.1 (GATA transcription factor 15-like [Cucurbita moschata] >KAG6597560.1 GATA transcription factor 15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029005.1 GATA transcription factor 15, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.9 bits (712), Expect = 2.6e-71
Identity = 149/150 (99.33%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR 120
           NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR 120

Query: 121 YSVERQRKKLGEEEQAAVLLMALSYGSVFA 151
            SVERQRKKLGEEEQAAVLLMALSYGSVFA
Sbjct: 121 SSVERQRKKLGEEEQAAVLLMALSYGSVFA 150

[Close]

BLAST of CmaCh00G004250 vs. NCBI nr
Match: XP_023538706.1 (GATA transcription factor 15-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275.8 bits (704), Expect = 2.2e-70
Identity = 147/150 (98.00%), Postives = 149/150 (99.33%), Query Frame = 0


Query: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR 120
           NACGIRSRKKRR+ILGLSKGVVEDKKNKRSNSC+NISNSKLRDSLKQRLMALGREVLMQR
Sbjct: 61  NACGIRSRKKRRSILGLSKGVVEDKKNKRSNSCHNISNSKLRDSLKQRLMALGREVLMQR 120

Query: 121 YSVERQRKKLGEEEQAAVLLMALSYGSVFA 151
            SVERQRKKLGEEEQAAVLLMALSYGSVFA
Sbjct: 121 SSVERQRKKLGEEEQAAVLLMALSYGSVFA 150

[Close]

BLAST of CmaCh00G004250 vs. NCBI nr
Match: XP_038877875.1 (GATA transcription factor 15-like [Benincasa hispida])

HSP 1 Score: 255.4 bits (651), Expect = 3.1e-64
Identity = 138/150 (92.00%), Postives = 144/150 (96.00%), Query Frame = 0


Query: 1   MMMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60
           MMMDPSDR SESED+S KN+GGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC
Sbjct: 1   MMMDPSDRGSESEDMSGKNTGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLC 60

Query: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQR 120
           NACGIRSRKKRRAILGLSKGVVEDKKNK+S   NNISNSKLRDSLKQRL+ALGREVLMQR
Sbjct: 61  NACGIRSRKKRRAILGLSKGVVEDKKNKKS---NNISNSKLRDSLKQRLLALGREVLMQR 120

Query: 121 YSVERQRKKLGEEEQAAVLLMALSYGSVFA 151
            +VERQRKKLGEEEQAAVLLMALSYGSV+A
Sbjct: 121 STVERQRKKLGEEEQAAVLLMALSYGSVYA 147

[Close]

BLAST of CmaCh00G004250 vs. NCBI nr
Match: XP_022956292.1 (GATA transcription factor 15-like [Cucurbita moschata] >XP_022979974.1 GATA transcription factor 15-like [Cucurbita maxima] >XP_023529146.1 GATA transcription factor 15-like [Cucurbita pepo subsp. pepo] >KAG6582187.1 GATA transcription factor 15, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018583.1 GATA transcription factor 15 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249.6 bits (636), Expect = 1.7e-62
Identity = 136/149 (91.28%), Postives = 144/149 (96.64%), Query Frame = 0


Query: 2   MMDPSDRVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN 61
           MMDPSDR SESEDIS KNSGGVSSEES VNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN
Sbjct: 1   MMDPSDRGSESEDISGKNSGGVSSEESIVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCN 60

Query: 62  ACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQRY 121
           ACGIRSRKKRRAILGL++GVVEDKK+K+S+S NNIS+SKLRDSLKQRL+ALGREVLMQR 
Sbjct: 61  ACGIRSRKKRRAILGLNRGVVEDKKSKKSSS-NNISHSKLRDSLKQRLLALGREVLMQRS 120

Query: 122 SVERQRKKLGEEEQAAVLLMALSYGSVFA 151
           SVERQRKKLGEEEQAAVLLMALSYGSV+A
Sbjct: 121 SVERQRKKLGEEEQAAVLLMALSYGSVYA 148

[Close]

BLAST of CmaCh00G004250 vs. TAIR 10
Match: AT3G06740.1 (GATA transcription factor 15 )

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-35
Identity = 91/153 (59.48%), Postives = 107/153 (69.93%), Query Frame = 0


Query: 2   MMDPSDRVSESEDISSKNSGGVSSEESQVNEQN------KKTCADCGTSKTPLWRGGPAG 61
           M+DP+++V +SE + SK +   + EE   +  N      KK+CA CGTSKTPLWRGGPAG
Sbjct: 1   MLDPTEKVIDSESMESKLTSVDAIEEHSSSSSNEAISNEKKSCAICGTSKTPLWRGGPAG 60

Query: 62  PKSLCNACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGRE 121
           PKSLCNACGIR+RKKRR ++       EDKK K  N      N K  DSLKQRLM LGRE
Sbjct: 61  PKSLCNACGIRNRKKRRTLISNRS---EDKKKKSHN-----RNPKFGDSLKQRLMELGRE 120

Query: 122 VLMQRYSVERQRK-KLGEEEQAAVLLMALSYGS 148
           V+MQR + E QR+ KLGEEEQAAVLLMALSY S
Sbjct: 121 VMMQRSTAENQRRNKLGEEEQAAVLLMALSYAS 145

[Close]

BLAST of CmaCh00G004250 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 138.3 bits (347), Expect = 5.2e-33
Identity = 86/151 (56.95%), Postives = 109/151 (72.19%), Query Frame = 0


Query: 2   MMDPSDRV--SESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSL 61
           M+D S++V   +SE + ++    +    + VN++ KKTCADCGTSKTPLWRGGP GPKSL
Sbjct: 1   MLDHSEKVLLVDSETMKTRAEDMIEQNNTSVNDK-KKTCADCGTSKTPLWRGGPVGPKSL 60

Query: 62  CNACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRLMALGREVLMQ 121
           CNACGIR+RKKRR       G  ++KK K+S+S     N K  +SLKQ LM LG   + +
Sbjct: 61  CNACGIRNRKKRRG------GTEDNKKLKKSSSGG--GNRKFGESLKQSLMDLG---IRK 120

Query: 122 RYSVERQRKKLGEEEQAAVLLMALSYGSVFA 151
           R +VE+QR+KLGEEEQAAVLLMALSYGSV+A
Sbjct: 121 RSTVEKQRQKLGEEEQAAVLLMALSYGSVYA 139

[Close]

BLAST of CmaCh00G004250 vs. TAIR 10
Match: AT3G16870.1 (GATA transcription factor 17 )

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25
Identity = 79/177 (44.63%), Postives = 105/177 (59.32%), Query Frame = 0


Query: 11  ESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKK 70
           ++E+ SS  SGG SS     +   K+TC DCGT +TPLWRGGPAGPKSLCNACGI+SRKK
Sbjct: 22  DNENCSSSGSGGGSS-----SGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKK 81

Query: 71  RRAILGLSKGVVEDKKNKRSNSCNNISNSKLRDSLKQRL--------------------- 130
           R+A LG+     E+KK  R ++CNN  N   R++ K ++                     
Sbjct: 82  RQAALGMRS---EEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKR 141

Query: 131 -------------MALGREV-LMQRYSVERQR--KKLGEEEQAAVLLMALSYGSVFA 151
                        + LG +V +M+R +VE++R  +KLGEEE+AAVLLMALS  SV+A
Sbjct: 142 SSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190

[Close]

BLAST of CmaCh00G004250 vs. TAIR 10
Match: AT4G16141.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 97.8 bits (242), Expect = 7.7e-21
Identity = 75/189 (39.68%), Postives = 100/189 (52.91%), Query Frame = 0


Query: 8   RVSESEDISSKNSGGVSSEESQVNEQNKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRS 67
           ++  + D S  ++G  SS  S      KKTC DCGTS+TPLWRGGPAGPKSLCNACGI+S
Sbjct: 11  KLESAGDSSDVDNGNCSSSGS--GGDTKKTCVDCGTSRTPLWRGGPAGPKSLCNACGIKS 70

Query: 68  RKKRRAILGLSK-------------------------------------GVVEDKKNKRS 127
           RKKR+A LG+ +                                     G+V+  K +  
Sbjct: 71  RKKRQAALGIRQDDIKIKSKSNNNLGLESRNVKTGKGEPVNVKIAKCEPGIVKIAKGEPG 130

Query: 128 NSCNNI----SNSKLRDSLKQRLMALGREV-------LMQRYSVERQR--KKLGEEEQAA 147
           N  N I     NS   ++ K+ +  +GR +        M+R +VE++R  +KLGEEE+AA
Sbjct: 131 NVKNKIKRDPENSSSSNNNKKNVKRVGRFLDFGFKVPAMKRSAVEKKRLWRKLGEEERAA 190

[Close]

BLAST of CmaCh00G004250 vs. TAIR 10
Match: AT5G26930.1 (GATA transcription factor 23 )

HSP 1 Score: 78.6 bits (192), Expect = 4.9e-15
Identity = 49/115 (42.61%), Postives = 67/115 (58.26%), Query Frame = 0


Query: 36  KTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGLSKGVVEDKKNKRSNSCNN 95
           + C++C T+KTP+WRGGP GPKSLCNACGIR RK+RR+ L L   ++   K+  S   N 
Sbjct: 26  RCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSEL-LGIHIIRSHKSLASKKINL 85

Query: 96  ISNSKLRDSLKQRLMALGREVLMQRYSVERQRKKLGEEEQAAVLLMALSYGSVFA 151
           +S+S    ++K                   +R+ L EEEQAA+ L+ LS  SV A
Sbjct: 86  LSSSHGGVAVK-------------------KRRSLKEEEQAALCLLLLSCSSVLA 120

The following BLAST results are available for this feature:

BLAST of CmaCh00G004250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LG10	2.0e-34	59.48	GATA transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=GATA15 PE=2 SV=2	[more]
Q9FJ10	7.3e-32	56.95	GATA transcription factor 16 OS=Arabidopsis thaliana OX=3702 GN=GATA16 PE=2 SV=1	[more]
Q9LIB5	1.9e-24	44.63	GATA transcription factor 17 OS=Arabidopsis thaliana OX=3702 GN=GATA17 PE=2 SV=1	[more]
Q8LC59	6.8e-14	42.61	GATA transcription factor 23 OS=Arabidopsis thaliana OX=3702 GN=GATA23 PE=2 SV=2	[more]
Q9SZI6	4.9e-12	34.25	Putative GATA transcription factor 22 OS=Arabidopsis thaliana OX=3702 GN=GATA22 ...	[more]

BLAST of CmaCh00G004250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IG45	1.2e-72	100.00	GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111474299 PE...	[more]
A0A6J1GF07	1.3e-71	99.33	GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111453593 ...	[more]
A0A6J1IY32	8.3e-63	91.28	GATA transcription factor 15-like OS=Cucurbita maxima OX=3661 GN=LOC111479506 PE...	[more]
A0A6J1GVX6	8.3e-63	91.28	GATA transcription factor 15-like OS=Cucurbita moschata OX=3662 GN=LOC111458032 ...	[more]
A0A6J1C7L6	3.1e-62	88.16	GATA transcription factor 16-like OS=Momordica charantia OX=3673 GN=LOC111009131...	[more]

BLAST of CmaCh00G004250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022972130.1	2.4e-72	100.00	GATA transcription factor 15-like [Cucurbita maxima] >XP_022975215.1 GATA transc...	[more]
XP_022950506.1	2.6e-71	99.33	GATA transcription factor 15-like [Cucurbita moschata] >KAG6597560.1 GATA transc...	[more]
XP_023538706.1	2.2e-70	98.00	GATA transcription factor 15-like [Cucurbita pepo subsp. pepo]	[more]
XP_038877875.1	3.1e-64	92.00	GATA transcription factor 15-like [Benincasa hispida]	[more]
XP_022956292.1	1.7e-62	91.28	GATA transcription factor 15-like [Cucurbita moschata] >XP_022979974.1 GATA tran...	[more]

BLAST of CmaCh00G004250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06740.1	1.5e-35	59.48	GATA transcription factor 15	[more]
AT5G49300.1	5.2e-33	56.95	GATA transcription factor 16	[more]
AT3G16870.1	1.4e-25	44.63	GATA transcription factor 17	[more]
AT4G16141.1	7.7e-21	39.68	GATA type zinc finger transcription factor family protein	[more]
AT5G26930.1	4.9e-15	42.61	GATA transcription factor 23	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000679	Zinc finger, GATA-type	SMART	SM00401	GATA_3	coord: 32..83 e-value: 8.3E-13 score: 58.5
IPR000679	Zinc finger, GATA-type	PFAM	PF00320	GATA	coord: 38..72 e-value: 8.9E-17 score: 60.4
IPR000679	Zinc finger, GATA-type	PROSITE	PS00344	GATA_ZN_FINGER_1	coord: 38..63
IPR000679	Zinc finger, GATA-type	PROSITE	PS50114	GATA_ZN_FINGER_2	coord: 32..68 score: 12.347239
IPR000679	Zinc finger, GATA-type	CDD	cd00202	ZnF_GATA	coord: 37..72 e-value: 2.16942E-13 score: 58.9234
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	3.30.50.10		coord: 32..133 e-value: 4.6E-16 score: 60.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..41
None	No IPR available	PANTHER	PTHR47172:SF1	OS01G0976800 PROTEIN	coord: 2..150
None	No IPR available	PANTHER	PTHR47172	OS01G0976800 PROTEIN	coord: 2..150
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 31..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G004250.1	CmaCh00G004250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding