CmaCh00G003200 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTTGCCGGGCACACCGAGACCGGGGCAAGGGGAAAGCTTATTCGTTTCAGATCCTTGGCGCGACTTGCGCCGGTTTTGGTTTGGGCATCAGAGGGTGCACGAATGCTCCCCCCGACACAAAAGAGTTGGCAAACACGTTGGGTCGTTCGGTGTTGTTTAGGCATCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCAGGCAGCGAACCGCCCACGTCGCCACGATCCGAACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAAAACATCTAAGGGCATCACAGACTTGTTATTGCCTCAAACTTCCTTGGCCTAAGCGGCCATAGTCCCTCTAAGAAGCTGGCCGCGGAGGGATTCCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCACCGTGTTGAGTCAAATTAAGCCACAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCTGGCGGAGTCCTTAAAGCAACATCCGCCAATCCCTTGTCGACATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGGAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACAGAATAGGATCGAAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAGTTAAGGCCAGGAGCGCATCGCCGACAGAAGGGACGAGCCAATCGGTGCTCACCATAGGCGGACCGATCGACCCAACCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAA ATGCTTTGCCGGGCACACCGAGACCGGGGCAAGGGGAAAGCTTATTCGTTTCAGATCCTTGGCGCGACTTGCGCCGGTTTTGGTTTGGGCATCAGAGGGTGCACGAATGCTCCCCCCGACACAAAAGAGTTGGCAAACACGTTGGGTCGCATCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTGCTGGCGGAGTCCTTAAAGCAACATCCGCCAATCCCTTGTCGACATCGTTTATGGTTGAGACTAGGACGCGCCGGAGGCACGACCCGGCCAGTTAAGGCCAGGAGCGCATCGCCGACAGAAGGGACGAGCCAATCGGTGCTCACCATAGGCGGACCGATCGACCCAACCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAA ATGCTTTGCCGGGCACACCGAGACCGGGGCAAGGGGAAAGCTTATTCGTTTCAGATCCTTGGCGCGACTTGCGCCGGTTTTGGTTTGGGCATCAGAGGGTGCACGAATGCTCCCCCCGACACAAAAGAGTTGGCAAACACGTTGGGTCGCATCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTGCTGGCGGAGTCCTTAAAGCAACATCCGCCAATCCCTTGTCGACATCGTTTATGGTTGAGACTAGGACGCGCCGGAGGCACGACCCGGCCAGTTAAGGCCAGGAGCGCATCGCCGACAGAAGGGACGAGCCAATCGGTGCTCACCATAGGCGGACCGATCGACCCAACCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAA MLCRAHRDRGKGKAYSFQILGATCAGFGLGIRGCTNAPPDTKELANTLGRIDNDPSAGSPTETLLRLLLPLNDKVLAESLKQHPPIPCRHRLWLRLGRAGGTTRPVKARSASPTEGTSQSVLTIGGPIDPTQGPTTSFLTATT Homology
BLAST of CmaCh00G003200 vs. ExPASy Swiss-Prot
Match: P0C5Q0 (Putative uncharacterized protein YLR154W-F OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=YLR154W-F PE=5 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 9.4e-05 Identity = 25/41 (60.98%), Postives = 28/41 (68.29%), Query Frame = 0
BLAST of CmaCh00G003200 vs. ExPASy TrEMBL
Match: A0A2N9IFN0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50755 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 2.8e-12 Identity = 58/121 (47.93%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of CmaCh00G003200 vs. ExPASy TrEMBL
Match: A0A0L9VE83 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan09g202400 PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.1e-11 Identity = 64/144 (44.44%), Postives = 69/144 (47.92%), Query Frame = 0
BLAST of CmaCh00G003200 vs. ExPASy TrEMBL
Match: A0A2N9IDP5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50754 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 1.4e-11 Identity = 57/120 (47.50%), Postives = 62/120 (51.67%), Query Frame = 0
BLAST of CmaCh00G003200 vs. ExPASy TrEMBL
Match: A0A2N9I9H1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50489 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 1.4e-11 Identity = 57/120 (47.50%), Postives = 62/120 (51.67%), Query Frame = 0
BLAST of CmaCh00G003200 vs. ExPASy TrEMBL
Match: A0A1J7FP78 (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_03599 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 9.1e-11 Identity = 55/118 (46.61%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of CmaCh00G003200 vs. NCBI nr
Match: KOM53365.1 (hypothetical protein LR48_Vigan09g202400 [Vigna angularis]) HSP 1 Score: 79.7 bits (195), Expect = 2.2e-11 Identity = 64/144 (44.44%), Postives = 69/144 (47.92%), Query Frame = 0
BLAST of CmaCh00G003200 vs. NCBI nr
Match: OIV89726.1 (hypothetical protein TanjilG_03599 [Lupinus angustifolius]) HSP 1 Score: 76.6 bits (187), Expect = 1.9e-10 Identity = 55/118 (46.61%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of CmaCh00G003200 vs. NCBI nr
Match: KEH17021.1 (senescence-associated protein [Medicago truncatula]) HSP 1 Score: 74.3 bits (181), Expect = 9.4e-10 Identity = 64/181 (35.36%), Postives = 69/181 (38.12%), Query Frame = 0
BLAST of CmaCh00G003200 vs. NCBI nr
Match: KEH16994.1 (senescence-associated protein [Medicago truncatula]) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-09 Identity = 63/175 (36.00%), Postives = 68/175 (38.86%), Query Frame = 0
BLAST of CmaCh00G003200 vs. NCBI nr
Match: PHT25982.1 (Protein TAR1 [Capsicum baccatum]) HSP 1 Score: 71.2 bits (173), Expect = 7.9e-09 Identity = 66/160 (41.25%), Postives = 70/160 (43.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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