CmaCh00G003160 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G003160
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Photosystem II D2 protein
Location	Cma_Chr00: 24358261 .. 24360410 (-)
RNA-Seq Expression	CmaCh00G003160
Synteny	CmaCh00G003160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGCAACTTCTTAACCCGCCGCTGTTAAGACAGACTCCTGCTAATAGTTTAGCACACTCTTTGTTCTACTATGGGGTCGCACAAGGAGATAGATTTGACTCCTTGGTGTCCATTAGGTGGTCTGTGGACTTTGCTTTCTTCGGACTAATAGGTGTTGAATCTTACACGACAATTTCAATTTGGACTTGCTCGATCTGTTCAATTGAGACCTTATAATGATCATGCAATTGCCGGGACCAATTGCTGTTTTCTTTATGTATTCCTGATTTATCTCCACTAGGGCAGTCTAGTCTTCTGGTTGGTTCTTTGCCCCTAGTTTTGGTGTAGCTACTATATTTCTATTCATCTTTTACAAGGATTTCATAATTGGACATTGAACCCCTTTCATATGATGTTCCAGGTGTATTGAGCGCGGCTATGCGTCATGGTGCTGCCGTAGAAAATCCCTTATTTGAAGATGGTGATGGATGGTGCAAATAGATTCCTTCCGGATAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACTGCTAACCGCTTTTGGTACCAAATCTTTGAGGTTTTCCAATAAAAAAGGGGTTATTGCATTTCTTTCTCTTATTTGTACCAGTAACTGCTTTATGGATGAGTGCTTCCTCTTGGAGTAGTAGTTGGTCTGGCCCTGAACCTACGTGCCTATGACTTTGTTTCTCAGGAAATCCATGGGAAGATCCTGAATTTGAGACTTTCTATCTATACACCCAAAATCTTCTCTTAACCGAAGGGATTCGTACTTGGATGGCAGCTCAAGATCAGCCTCATGAAAACACACCTTGCCTTATATTACCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATGGAACTTTCTCTTTTGGAACTTTATCTTTAGTTGGTCGTAACCAAGAAACAACCCCCTGGTTTCGGTGGGAATGCCCGACTTATCCATTTATATGGTAAACTATTGGGGGCGGGCTCATGTAGCCCATGCCGGATTAATCGTATTCTGTTCTGGGGCGGAGCAATGAACCTATTCGAAGTGGCTCATTTCGTACCTGAGACACCTTTCCGTACTTTGTGTCTAGAGTACTTCACTGAATTTCCTCTGCAGTATTGGGTTTTGACGATATTTATCATGCACTTCTGGGACCCGATACCCTTGATCTTTTTCATTCTTCCGTTATGTGTGGAAAGATAGAAAGCAAATGCCTACTTGGGTATTCACTAAATTAAGTATAAGTTTCTTCTAGTATTCAAAGCTCCTGATTTAGGGAGCGTATATGATACCTAGGCTCCGTGGGGAGGAGATCTAAGATCAATTACCAACTTTCACCTTAGCCCAAGTGTGATATTTGGGTATTTACTCAAATCTCTGGGGGAGAGAGAAGGATGGATTCTTAGTGTAGACGATTTGGAAGATATAGTTGGGGGGCATGTATGGTTAGTTAGGTTACATTTGTATACTTGGGGGAATTTAGCAGATCTTAACTAAACCGTTTGGCTCGCCGCGCACTTGTATGGTCTGGAGAAGCTTACTTGTCTGATAGTTTAGGTGCTTTATCCCGTTTTGGTTTTATTGCTTGTTCTTTTGTCTGGCTTGTTCTTTTGTCTGGTTCAATAATACTGCTTATCCGAGTGAGTGAGTTTTAGGGGCCGACTGGACCCGAAGCTTCTCAAGCTCAACCAACCGTTTACGTTTCTAGTTAGAGACCTCTTGTAGCTAACGTTGGATCAAGGACCTACTCTACTACTGGTTTAGGTAAATATCTAATGCGTTCTCCGACCATAGAGAAAAGTCATTTTGAGGGGAGAGATAGAAAGAAAGAGACTATGTGCTTTTGGGATCTGCGTGCTCCTTGGTTAGAACCAATAAGGGGTCCTAATCGTTTGGACTTGAGTAGGCAAAGATATACAACCTTGGCAAGACCTTACGCAGAATATATGACCCATGCTCCTTTAGGTTCTTTAAATTACGGGGGTGGCGTGTAGCTACCGAAATTAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGTTACCTCTCATTTTCTTCTAGGATTCCCCCCATTTGTAGGTCATTTATGGCATGCAGGAAGGGCTCGGGCAGCTGCCGCAGGATTTGAAAAAGGAATTGATCGACCTC

mRNA sequence

GATGCAACTTCTTAACCCGCCGCTGTTAAGACAGACTCCTGCTAATAGTTTAGCACACTCTTTGTTCTACTATGGGGTCGCACAAGGAGATAGATTTGACTCCTTGGTGTCCATTAGGTGGTCTGTGGACTTTGCTTTCTTCGGACTAATAGGTGTATTGAGCGCGGCTATGCGTCATGGTGCTGCCGTAGAAAATCCCTTATTTGAAGATGGAAATCCATGGGAAGATCCTGAATTTGAGACTTTCTATCTATACACCCAAAATCTTCTCTTAACCGAAGGGATTCGTACTTGGATGGCAGCTCAAGATCAGCCTCATGAAAACACACCTTGCCTTATATTACCTGAGGAGGAAGGGCTCGGGCAGCTGCCGCAGGATTTGAAAAAGGAATTGATCGACCTC

Coding sequence (CDS)

ATGCAACTTCTTAACCCGCCGCTGTTAAGACAGACTCCTGCTAATAGTTTAGCACACTCTTTGTTCTACTATGGGGTCGCACAAGGAGATAGATTTGACTCCTTGGTGTCCATTAGGTGGTCTGTGGACTTTGCTTTCTTCGGACTAATAGGTGTATTGAGCGCGGCTATGCGTCATGGTGCTGCCGTAGAAAATCCCTTATTTGAAGATGGAAATCCATGGGAAGATCCTGAATTTGAGACTTTCTATCTATACACCCAAAATCTTCTCTTAACCGAAGGGATTCGTACTTGGATGGCAGCTCAAGATCAGCCTCATGAAAACACACCTTGCCTTATATTACCTGAGGAGGAAGGGCTCGGGCAGCTGCCGCAGGATTTGAAAAAGGAATTGATCGACCTC

Protein sequence

MQLLNPPLLRQTPANSLAHSLFYYGVAQGDRFDSLVSIRWSVDFAFFGLIGVLSAAMRHGAAVENPLFEDGNPWEDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEEEGLGQLPQDLKKELIDL

Homology

[Close]

BLAST of CmaCh00G003160 vs. ExPASy Swiss-Prot
Match: A8SE98 (Photosystem II D2 protein OS=Ceratophyllum demersum OX=4428 GN=psbD PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-10
Identity = 34/43 (79.07%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 75  EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEE 118
           EDPEFETF  YT+NLLL EGIR WMAAQDQPHEN   LI PEE
Sbjct: 308 EDPEFETF--YTKNLLLNEGIRAWMAAQDQPHEN---LIFPEE 345

[Close]

BLAST of CmaCh00G003160 vs. ExPASy Swiss-Prot
Match: Q9MUW2 (Photosystem II D2 protein OS=Mesostigma viride OX=41882 GN=psbD PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.8e-10
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 75  EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEE 118
           EDPEFETF  YT+NLLL EGIR WMAAQDQPHEN   L+ PEE
Sbjct: 309 EDPEFETF--YTKNLLLNEGIRAWMAAQDQPHEN---LVFPEE 346

[Close]

BLAST of CmaCh00G003160 vs. ExPASy Swiss-Prot
Match: Q4FFP4 (Photosystem II D2 protein OS=Acorus americanus OX=263995 GN=psbD PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-10
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 75  EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEE 118
           EDPEFETF  YT+N+LL EGIR WMAAQDQPHEN   LI PEE
Sbjct: 308 EDPEFETF--YTKNILLNEGIRAWMAAQDQPHEN---LIFPEE 345

[Close]

BLAST of CmaCh00G003160 vs. ExPASy Swiss-Prot
Match: Q3V539 (Photosystem II D2 protein OS=Acorus calamus OX=4465 GN=psbD PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-10
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 75  EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEE 118
           EDPEFETF  YT+N+LL EGIR WMAAQDQPHEN   LI PEE
Sbjct: 308 EDPEFETF--YTKNILLNEGIRAWMAAQDQPHEN---LIFPEE 345

[Close]

BLAST of CmaCh00G003160 vs. ExPASy Swiss-Prot
Match: A4QJB0 (Photosystem II D2 protein OS=Aethionema cordifolium OX=434059 GN=psbD PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-10
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 75  EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEE 118
           EDPEFETF  YT+N+LL EGIR WMAAQDQPHEN   LI PEE
Sbjct: 308 EDPEFETF--YTKNILLNEGIRAWMAAQDQPHEN---LIFPEE 345

[Close]

BLAST of CmaCh00G003160 vs. ExPASy TrEMBL
Match: A0A0D2QUQ7 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G234300 PE=3 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.9e-11
Identity = 53/111 (47.75%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 44  FAFFGLIGVLSAAMR---HGAAVENPLFEDG---------NP---------------W-- 103
           F   G++GVL AA+    HGA VEN LFEDG         NP               W  
Sbjct: 132 FHMMGVVGVLGAALLYAIHGATVENTLFEDGDGVNIFRAFNPTQAEETYSMVTANHFWSQ 191

Query: 104 --------EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEE 118
                   EDPEFETF  YT+N+LL EGIR WMAAQDQPHEN   LI  EE
Sbjct: 192 IFGEIRAAEDPEFETF--YTKNILLNEGIRAWMAAQDQPHEN---LIFLEE 237

[Close]

BLAST of CmaCh00G003160 vs. ExPASy TrEMBL
Match: A0A7J7M888 (Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_016478 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.9e-10
Identity = 49/106 (46.23%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 44  FAFFGLIGVLSAAMR---HGAAVENPLFEDGNP---W----------------------- 103
           F   G+ GVL AA+    HGA VEN LFED +    W                       
Sbjct: 104 FHMMGVAGVLGAALLYAIHGATVENTLFEDNDVTGLWMSALGVVGLALNLHAYDFVSQEI 163

Query: 104 ---EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEE 118
              EDPEFETF  YT+N+LL +GI  WMAAQDQPHEN   LI PEE
Sbjct: 164 RTIEDPEFETF--YTKNILLNKGIHAWMAAQDQPHEN---LIFPEE 204

[Close]

BLAST of CmaCh00G003160 vs. ExPASy TrEMBL
Match: A0A5D2QRR7 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A05G362700v1 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.2e-10
Identity = 46/104 (44.23%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 48  GLIGVLSAAMRHGAAVENPLFEDGNP--------W------------------------- 107
           G++G       HGA VEN LFEDG+         W                         
Sbjct: 169 GVLGTALLCAIHGATVENTLFEDGDGANTFLTVLWMSALGIVSLALNLRAYDFISQEIHA 228

Query: 108 -EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEE 118
            EDPEFETF  YT+N+LL EGIR WMA+QDQPHEN   LI PEE
Sbjct: 229 AEDPEFETF--YTKNILLNEGIRAWMASQDQPHEN---LIFPEE 267

[Close]

BLAST of CmaCh00G003160 vs. ExPASy TrEMBL
Match: A0A5D2GN19 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A05G358600v1 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.2e-10
Identity = 46/104 (44.23%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 48  GLIGVLSAAMRHGAAVENPLFEDGNP--------W------------------------- 107
           G++G       HGA VEN LFEDG+         W                         
Sbjct: 169 GVLGTALLCAIHGATVENTLFEDGDGANTFLTVLWMSALGIVSLALNLRAYDFISQEIHA 228

Query: 108 -EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEE 118
            EDPEFETF  YT+N+LL EGIR WMA+QDQPHEN   LI PEE
Sbjct: 229 AEDPEFETF--YTKNILLNEGIRAWMASQDQPHEN---LIFPEE 267

[Close]

BLAST of CmaCh00G003160 vs. ExPASy TrEMBL
Match: A0A151R6Q3 (Photosystem II D2 protein OS=Cajanus cajan OX=3821 GN=KK1_040553 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 1.2e-09
Identity = 59/142 (41.55%), Postives = 68/142 (47.89%), Query Frame = 0


Query: 12  TPANSLAHS--LFYYGVAQGD--RFDSLVSIRWSVDF-AFFGLIGVLSAAMRHGAAVE-- 71
           TPANSLAHS  L +   AQGD  R+  L  +   V     FGLIG +        +V+  
Sbjct: 38  TPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLR 97

Query: 72  --------------------NPLFEDG---------NPWEDPEFETFYLYTQNLLLTEGI 118
                                PL + G            EDPEFETF  YT+N+LL EGI
Sbjct: 98  PYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFEIRAAEDPEFETF--YTKNILLNEGI 157

[Close]

BLAST of CmaCh00G003160 vs. NCBI nr
Match: GEW63126.1 (photosystem II protein D2, chloroplastic [Tanacetum cinerariifolium])

HSP 1 Score: 79.7 bits (195), Expect = 2.1e-11
Identity = 60/121 (49.59%), Postives = 69/121 (57.02%), Query Frame = 0


Query: 12  TPANSLAHS--LFYYGVAQGD--RFDSLVSIRWSVDF-AFFGLIGVL--------SAAMR 71
           TPANSLAHS  L +   AQGD  R+  L  +   V     FGLIG +        S  +R
Sbjct: 81  TPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLR 140

Query: 72  --HGAAVENPLFEDGNPWEDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPE 118
             +  A   P+ E     EDPEFETF  YT+N+LL EGIR WMAAQDQPHEN   LI PE
Sbjct: 141 PYNAIAFSGPIAEI-RAAEDPEFETF--YTKNILLNEGIRAWMAAQDQPHEN---LIFPE 195

[Close]

BLAST of CmaCh00G003160 vs. NCBI nr
Match: KJB10925.1 (hypothetical protein B456_001G234300 [Gossypium raimondii])

HSP 1 Score: 78.2 bits (191), Expect = 6.1e-11
Identity = 53/111 (47.75%), Postives = 58/111 (52.25%), Query Frame = 0


Query: 44  FAFFGLIGVLSAAMR---HGAAVENPLFEDG---------NP---------------W-- 103
           F   G++GVL AA+    HGA VEN LFEDG         NP               W  
Sbjct: 132 FHMMGVVGVLGAALLYAIHGATVENTLFEDGDGVNIFRAFNPTQAEETYSMVTANHFWSQ 191

Query: 104 --------EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEE 118
                   EDPEFETF  YT+N+LL EGIR WMAAQDQPHEN   LI  EE
Sbjct: 192 IFGEIRAAEDPEFETF--YTKNILLNEGIRAWMAAQDQPHEN---LIFLEE 237

[Close]

BLAST of CmaCh00G003160 vs. NCBI nr
Match: KAG6539831.1 (hypothetical protein Mapa_018877 [Marchantia paleacea])

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-10
Identity = 53/124 (42.74%), Postives = 61/124 (49.19%), Query Frame = 0


Query: 40  WSVD-FAFFGLIGVLSAAMR---HGAAVENPLFEDG---------NPW------------ 99
           W+++ F   G+ GVL AA+    HGA VEN LFEDG         NP             
Sbjct: 160 WTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQSEETYSMVTAN 219

Query: 100 ---------------------EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLI 118
                                EDPEFETF  YT+N+LL EGIR WMAAQDQPHEN   L+
Sbjct: 220 RFGLALNLRAYDFVSQEIRAAEDPEFETF--YTKNILLNEGIRAWMAAQDQPHEN---LV 278

[Close]

BLAST of CmaCh00G003160 vs. NCBI nr
Match: KAG6540409.1 (hypothetical protein Mapa_018313 [Marchantia paleacea])

HSP 1 Score: 77.0 bits (188), Expect = 1.4e-10
Identity = 53/124 (42.74%), Postives = 61/124 (49.19%), Query Frame = 0


Query: 40  WSVD-FAFFGLIGVLSAAMR---HGAAVENPLFEDG---------NPW------------ 99
           W+++ F   G+ GVL AA+    HGA VEN LFEDG         NP             
Sbjct: 91  WTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQSEETYSMVTAN 150

Query: 100 ---------------------EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLI 118
                                EDPEFETF  YT+N+LL EGIR WMAAQDQPHEN   L+
Sbjct: 151 RFGLALNLRAYDFVSQEIRAAEDPEFETF--YTKNILLNEGIRAWMAAQDQPHEN---LV 209

[Close]

BLAST of CmaCh00G003160 vs. NCBI nr
Match: KAF6151000.1 (hypothetical protein GIB67_016478 [Kingdonia uniflora])

HSP 1 Score: 75.5 bits (184), Expect = 3.9e-10
Identity = 49/106 (46.23%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 44  FAFFGLIGVLSAAMR---HGAAVENPLFEDGNP---W----------------------- 103
           F   G+ GVL AA+    HGA VEN LFED +    W                       
Sbjct: 104 FHMMGVAGVLGAALLYAIHGATVENTLFEDNDVTGLWMSALGVVGLALNLHAYDFVSQEI 163

Query: 104 ---EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEE 118
              EDPEFETF  YT+N+LL +GI  WMAAQDQPHEN   LI PEE
Sbjct: 164 RTIEDPEFETF--YTKNILLNKGIHAWMAAQDQPHEN---LIFPEE 204

[Close]

BLAST of CmaCh00G003160 vs. TAIR 10
Match: ATCG00270.1 (photosystem II reaction center protein D )

HSP 1 Score: 66.6 bits (161), Expect = 1.7e-11
Identity = 33/43 (76.74%), Postives = 35/43 (81.40%), Query Frame = 0


Query: 75  EDPEFETFYLYTQNLLLTEGIRTWMAAQDQPHENTPCLILPEE 118
           EDPEFETF  YT+N+LL EGIR WMAAQDQPHEN   LI PEE
Sbjct: 308 EDPEFETF--YTKNILLNEGIRAWMAAQDQPHEN---LIFPEE 345

The following BLAST results are available for this feature:

BLAST of CmaCh00G003160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8SE98	1.4e-10	79.07	Photosystem II D2 protein OS=Ceratophyllum demersum OX=4428 GN=psbD PE=3 SV=1	[more]
Q9MUW2	1.8e-10	76.74	Photosystem II D2 protein OS=Mesostigma viride OX=41882 GN=psbD PE=3 SV=1	[more]
Q4FFP4	2.4e-10	76.74	Photosystem II D2 protein OS=Acorus americanus OX=263995 GN=psbD PE=3 SV=1	[more]
Q3V539	2.4e-10	76.74	Photosystem II D2 protein OS=Acorus calamus OX=4465 GN=psbD PE=3 SV=1	[more]
A4QJB0	2.4e-10	76.74	Photosystem II D2 protein OS=Aethionema cordifolium OX=434059 GN=psbD PE=3 SV=1	[more]

BLAST of CmaCh00G003160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0D2QUQ7	2.9e-11	47.75	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G234300 PE=3 ...	[more]
A0A7J7M888	1.9e-10	46.23	Uncharacterized protein OS=Kingdonia uniflora OX=39325 GN=GIB67_016478 PE=3 SV=1	[more]
A0A5D2QRR7	4.2e-10	44.23	Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A05G362700v1 P...	[more]
A0A5D2GN19	4.2e-10	44.23	Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A05G358600v1 PE=...	[more]
A0A151R6Q3	1.2e-09	41.55	Photosystem II D2 protein OS=Cajanus cajan OX=3821 GN=KK1_040553 PE=3 SV=1	[more]

BLAST of CmaCh00G003160 vs. NCBI nr


Match Name	E-value	Identity	Description
GEW63126.1	2.1e-11	49.59	photosystem II protein D2, chloroplastic [Tanacetum cinerariifolium]	[more]
KJB10925.1	6.1e-11	47.75	hypothetical protein B456_001G234300 [Gossypium raimondii]	[more]
KAG6539831.1	1.4e-10	42.74	hypothetical protein Mapa_018877 [Marchantia paleacea]	[more]
KAG6540409.1	1.4e-10	42.74	hypothetical protein Mapa_018313 [Marchantia paleacea]	[more]
KAF6151000.1	3.9e-10	46.23	hypothetical protein GIB67_016478 [Kingdonia uniflora]	[more]

BLAST of CmaCh00G003160 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00270.1	1.7e-11	76.74	photosystem II reaction center protein D	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G003160.1	CmaCh00G003160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009772	photosynthetic electron transport in photosystem II
cellular_component	GO:0005622	intracellular anatomical structure
cellular_component	GO:0016020	membrane
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity