CmaCh00G003060 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G003060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Location	Cma_Chr00: 22790668 .. 22792815 (-)
RNA-Seq Expression	CmaCh00G003060
Synteny	CmaCh00G003060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACGGTATTCCCATAGCAATTGGGATTATGGATTTTTCGTTTATGGGGGTGGGATCTGTAGTAGGCAAGAGAATCACCCGTTTGATCGAGTATGCTACAAATCAATCAATTTTTACCTCTGATTTGAGTGTGTGCTTCTGGAGGAGCACGCATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTTCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTATTCTATGCATCAATCCTTACATCTCCTACTACTAGTGGGGTGACAGCTAGTTTTGGTATATTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGGTAAAAGAGTAATTTCTTGAACATTGATTGAATACGACAGTCCGAAGGGTTCCTAGGTGGCTGACGTTCGATAAGGGTTTATTCGATCTAAACCACATAATCCTTTAAAAGGTGTTTGAGTGAGTTATTTCAGCTCCACGCTTTCGTTCCCTCGAATCAAAATTCAATCAAGTCAAACCTTACTTAAAACTCTTTCAAAATTCATTCTCAGTATTTGTAACGAACAAGTAGTTATTTAGTTTATAGGAATCAAAGTCAAAATTCGCAGAGTGGATTTGTTTTTGGTAACATAAGATGAAATTGTAGAAAGAATCATGCGGAGAAATGGGTTTGACCGATATTCTTGATTAGTAATTAGGAAGCCCCTATTAAATAAAAGGCAAATTCTTTCTTCCGCTAAATTAGTCGGGAATAAAATGAATGAATTTCATGCTCCCTTTTTACATTACATGTGGATATATAATTCAACTACAGCAAATAGCGGCATAGAGTCTTGCATCTTTCTACATCTCTAGAGGATCTCTAGTTTGACTACGAATCCCTGTTGTTGGATCGAATTATAACGAACTTTTGGGTAACAAGTAGATATTACTTAGTGGAATTCTATATGAATTAGTATAATTATCAGATACCTTTTATAAAAAGAAATAAATAACAGGTAAATTAATATAACAAGAAATAACAGGTACAAATATTAAGTCAAGGTATCCATTCTATGACAAACTTACCCTCTCTCTACTTTTATGCCTTTAGTAGGCCTAGTATTTCTGGCAATTGCAATGGCTTCTTTATCTCTTCATGTTCAAAAAAACAAGATTATTTATGCTACACGTCTATTTGTTTTTTTCAAAACTTAGACTTTGATGATAACACAGCTATCTATTTAGTAGACGACAGTCTAATATGTGGCTGACTCCAAACATAAGCGATTATACATGCGTAAACATGATATTTGAGAAAATGAATTAGAAAGTCTTTGAAAATCTCCAATATATAATAGATCGGGTGACGAATGGTTGAGATGTCAAATCAATATATCTATATGGATGTAGGTATCCATAGGGAATCATATAAAGATGATGTTATTATTTGAGATCTAAGTAATTCGATGAGTTACTCCGTCAGTCAAGGTTCACATTAAAATAGTGCTAGTTGATTAGAGTTACTTTGGAAACAAAAAAAGTCAAATATCTGCGTTATTCTATCAATTCCAATAAAATGCAACGAGATCTAGTATGAGTTGGTGATCAGAACGTATATGGATAGAATTTATAAGAAAGAGGATCTCGGCCTTTATCTATCCCCCCTTTTTTTAGGTTCATTAGGGTGTTGGTTGGAACTTCCAATTATCTTGCTTGGTAGGGATTTGATATCTTGATTTCCATCTCAACAAAGAATTTCTTTGTTTTCCACATGGGATCGTAATCTCTTTCTATGGGATTGCAGGTCTCTTTACATGTCTCTTTATTAGCTCCTATTTGTGGTGCACCATTTTGTGGAATGTAGGTAGCGGTTATAATCGATTCAATAGAAAAGAAGGAATAGTGTCTATTTTGGGGGGTTTCCTGGACAAAATCCTAGAATCTTCCTCCGATTCCTTATGAAAGACATTCACTCCATCAGAATAGAGGTGAAAGAGGGTATTTATGCACGTCGTGTCCTTTATATGGAAATCAGAGGCCAAGGGGCCCTTGACTCGTACCTATCAGAATCTGACCCACCCCACGAGAGAGAAATTCGAAATTGAGCAAAAGGCTACCGAATTGGCTGGCCTATTTCTTGCGTGTACCAATTGA

mRNA sequence

ATGAAACGGTATTCCCATAGCAATTGGGATTATGGATTTTTCGTTTATGGGGGTGGGATCTGTAGTAGGCAAGAGAATCACCCGTTTGATCGATGTGTGCTTCTGGAGGAGCACGCATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTTCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTATTCTATGCATCAATCCTTACATCTCCTACTACTAGTGGGGTGACAGCTAGTTTTGGTATATTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGAGGCCAAGGGGCCCTTGACTCGTACCTATCAGAATCTGACCCACCCCACGAGAGAGAAATTCGAAATTGAGCAAAAGGCTACCGAATTGGCTGGCCTATTTCTTGCGTGTACCAATTGA

Coding sequence (CDS)

ATGAAACGGTATTCCCATAGCAATTGGGATTATGGATTTTTCGTTTATGGGGGTGGGATCTGTAGTAGGCAAGAGAATCACCCGTTTGATCGATGTGTGCTTCTGGAGGAGCACGCATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTTCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTATTCTATGCATCAATCCTTACATCTCCTACTACTAGTGGGGTGACAGCTAGTTTTGGTATATTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGAGGCCAAGGGGCCCTTGACTCGTACCTATCAGAATCTGACCCACCCCACGAGAGAGAAATTCGAAATTGAGCAAAAGGCTACCGAATTGGCTGGCCTATTTCTTGCGTGTACCAATTGA

Protein sequence

MKRYSHSNWDYGFFVYGGGICSRQENHPFDRCVLLEEHACKKEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYIAFAEAKGPLTRTYQNLTHPTREKFEIEQKATELAGLFLACTN

Homology

[Close]

BLAST of CmaCh00G003060 vs. ExPASy Swiss-Prot
Match: B1A944 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Carica papaya OX=3649 GN=accD PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-21
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SSALYDYQSNK+LFY SILTSPTT GVTASFG+LGDIIIAEPNAYI
Sbjct: 376 QEGSLSLMQMAK-ISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYI 435

Query: 102 AFA 105
           AFA
Sbjct: 436 AFA 437

[Close]

BLAST of CmaCh00G003060 vs. ExPASy Swiss-Prot
Match: Q09MG9 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Citrus sinensis OX=2711 GN=accD PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-21
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SSALYDYQSNK+LFY SILTSPTT GVTASFG+LGDIIIAEPNAYI
Sbjct: 374 QEGSLSLMQMAK-ISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYI 433

Query: 102 AFA 105
           AFA
Sbjct: 434 AFA 435

[Close]

BLAST of CmaCh00G003060 vs. ExPASy Swiss-Prot
Match: A0A344 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Coffea arabica OX=13443 GN=accD PE=3 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-21
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SSALYDYQSNK+LFY SILTSPTT GVTASFG+LGDIIIAEPNAYI
Sbjct: 372 QEGSLSLMQMAK-ISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYI 431

Query: 102 AFA 105
           AFA
Sbjct: 432 AFA 433

[Close]

BLAST of CmaCh00G003060 vs. ExPASy Swiss-Prot
Match: A0ZZ44 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Gossypium barbadense OX=3634 GN=accD PE=3 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-21
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SSALYDYQSNK+LFY SILTSPTT GVTASFG+LGDIIIAEPNAYI
Sbjct: 376 QEGSLSLMQMAK-ISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYI 435

Query: 102 AFA 105
           AFA
Sbjct: 436 AFA 437

[Close]

BLAST of CmaCh00G003060 vs. ExPASy Swiss-Prot
Match: Q2L915 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Gossypium hirsutum OX=3635 GN=accD PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.5e-21
Identity = 54/63 (85.71%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SSALYDYQSNK+LFY SILTSPTT GVTASFG+LGDIIIAEPNAYI
Sbjct: 376 QEGSLSLMQMAK-ISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYI 435

Query: 102 AFA 105
           AFA
Sbjct: 436 AFA 437

[Close]

BLAST of CmaCh00G003060 vs. ExPASy TrEMBL
Match: A0A394D0E3 (Cytochrome f OS=Lupinus angustifolius OX=3871 GN=TanjilG_00182 PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.8e-20
Identity = 65/95 (68.42%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SSALY+YQ+  +LFY SILTSPTT GVTASFG+LGDIIIAEPNAYI
Sbjct: 127 QEGSLSLMQMAK-ISSALYNYQTTIKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYI 186

Query: 102 AFA-EAKGPLTRTYQNLTHPTREKFEIEQKATELA 136
           AFA +   PLTR  +NLT       EIEQ+A ELA
Sbjct: 187 AFAGQGAIPLTRIDENLT-----PREIEQQAAELA 215

[Close]

BLAST of CmaCh00G003060 vs. ExPASy TrEMBL
Match: A0A3Q7G2U6 (CoA carboxyltransferase N-terminal domain-containing protein OS=Solanum lycopersicum OX=4081 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.4e-19
Identity = 65/113 (57.52%), Postives = 79/113 (69.91%), Query Frame = 0


Query: 7   SNWDYGFFVYGGGICSRQENHPFDRCVLLEEHACKKEGSVSLMQMSKRSSSALYDYQSNK 66
           +N + GF VYG  I S++E  P   CVLL     +K GS+SLMQM+K  SSALYDYQ NK
Sbjct: 67  ANQNNGFSVYGVWIHSQREKSP---CVLLLGTRMQK-GSLSLMQMAK-ISSALYDYQFNK 126

Query: 67  RLFYASILTSPTTSGVTASFGILGDIIIAEPNAYIAFAEAKGPLTRTYQNLTH 120
           +LFY SILTS TT GVT +F +LGDII+AEPNAYIAFA  + P  +  + L H
Sbjct: 127 KLFYVSILTSLTTGGVTTNFVMLGDIIVAEPNAYIAFAGKRYPKVQAAEYLFH 174

[Close]

BLAST of CmaCh00G003060 vs. ExPASy TrEMBL
Match: A0A4U5MZQ8 (Cytochrome f OS=Populus alba OX=43335 GN=D5086_0000290460 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.4e-19
Identity = 72/132 (54.55%), Postives = 79/132 (59.85%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SSALYDYQSNK+L Y SILTSPTT GVTASFG+LGDIIIAEPNAYI
Sbjct: 350 QEGSLSLMQMAK-ISSALYDYQSNKKLVYVSILTSPTTGGVTASFGMLGDIIIAEPNAYI 409

Query: 102 AFA----------------------------------EAKG----PLTRTYQNLTHPTRE 136
           AFA                                  E +G    PLTRT +NLT     
Sbjct: 410 AFAGKNRRILLRLFMKDIQSIRIEVKEGFYARRVLYMEIRGQGAIPLTRTDENLT----- 469

[Close]

BLAST of CmaCh00G003060 vs. ExPASy TrEMBL
Match: A0A5C7HVS3 (Photosystem I assembly protein Ycf4 OS=Acer yangbiense OX=1000413 GN=EZV62_012258 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 7.0e-19
Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 39  ACKKEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPN 98
           AC +EGS++LMQM+K  SSALYDYQSNK+LFY SILTSPTT GVTASFG+LGDIIIA+PN
Sbjct: 59  ACMQEGSLTLMQMAK-ISSALYDYQSNKKLFYVSILTSPTTDGVTASFGMLGDIIIAKPN 118

Query: 99  AYIAFA 105
           AYIAFA
Sbjct: 119 AYIAFA 123

[Close]

BLAST of CmaCh00G003060 vs. ExPASy TrEMBL
Match: A0A650G791 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Acer tataricum subsp. ginnala OX=57656 GN=accD PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 9.1e-19
Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SSALYDYQSNKRLFY SILTSPTT GVTASFG+LGDIIIAEPNAYI
Sbjct: 372 QEGSLSLMQMAK-ISSALYDYQSNKRLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYI 431

Query: 102 AFA 105
           AFA
Sbjct: 432 AFA 433

[Close]

BLAST of CmaCh00G003060 vs. NCBI nr
Match: OIW17040.1 (hypothetical protein TanjilG_00182 [Lupinus angustifolius])

HSP 1 Score: 108.2 bits (269), Expect = 5.9e-20
Identity = 65/95 (68.42%), Postives = 75/95 (78.95%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SSALY+YQ+  +LFY SILTSPTT GVTASFG+LGDIIIAEPNAYI
Sbjct: 127 QEGSLSLMQMAK-ISSALYNYQTTIKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYI 186

Query: 102 AFA-EAKGPLTRTYQNLTHPTREKFEIEQKATELA 136
           AFA +   PLTR  +NLT       EIEQ+A ELA
Sbjct: 187 AFAGQGAIPLTRIDENLT-----PREIEQQAAELA 215

[Close]

BLAST of CmaCh00G003060 vs. NCBI nr
Match: TKR74942.1 (acetyl-CoA carboxylase beta subunit [Populus alba])

HSP 1 Score: 105.1 bits (261), Expect = 5.0e-19
Identity = 72/132 (54.55%), Postives = 79/132 (59.85%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SSALYDYQSNK+L Y SILTSPTT GVTASFG+LGDIIIAEPNAYI
Sbjct: 350 QEGSLSLMQMAK-ISSALYDYQSNKKLVYVSILTSPTTGGVTASFGMLGDIIIAEPNAYI 409

Query: 102 AFA----------------------------------EAKG----PLTRTYQNLTHPTRE 136
           AFA                                  E +G    PLTRT +NLT     
Sbjct: 410 AFAGKNRRILLRLFMKDIQSIRIEVKEGFYARRVLYMEIRGQGAIPLTRTDENLT----- 469

[Close]

BLAST of CmaCh00G003060 vs. NCBI nr
Match: TXG60895.1 (hypothetical protein EZV62_012258 [Acer yangbiense])

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-18
Identity = 54/66 (81.82%), Postives = 61/66 (92.42%), Query Frame = 0


Query: 39  ACKKEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPN 98
           AC +EGS++LMQM+K  SSALYDYQSNK+LFY SILTSPTT GVTASFG+LGDIIIA+PN
Sbjct: 59  ACMQEGSLTLMQMAK-ISSALYDYQSNKKLFYVSILTSPTTDGVTASFGMLGDIIIAKPN 118

Query: 99  AYIAFA 105
           AYIAFA
Sbjct: 119 AYIAFA 123

[Close]

BLAST of CmaCh00G003060 vs. NCBI nr
Match: AWI72096.1 (acetyl-CoA carboxylase carboxyltransferase beta subunit [Thyrsanthella difformis])

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-18
Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SSALYDYQSNKRLFY SILTSPTT GVTASFG+LGDIIIAEPNAYI
Sbjct: 374 QEGSLSLMQMAK-ISSALYDYQSNKRLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYI 433

Query: 102 AFA 105
           AFA
Sbjct: 434 AFA 435

[Close]

BLAST of CmaCh00G003060 vs. NCBI nr
Match: QBC72849.1 (acetyl-CoA carboxylase carboxyltransferase beta subunit [Viburnum cylindricum])

HSP 1 Score: 103.2 bits (256), Expect = 1.9e-18
Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SSALYDYQSNKRLFY SILTSPTT GVTASFG+LGDIIIAEPNAYI
Sbjct: 400 QEGSLSLMQMAK-ISSALYDYQSNKRLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYI 459

Query: 102 AFA 105
           AFA
Sbjct: 460 AFA 461

[Close]

BLAST of CmaCh00G003060 vs. TAIR 10
Match: ATCG00500.1 (acetyl-CoA carboxylase carboxyl transferase subunit beta )

HSP 1 Score: 91.7 bits (226), Expect = 5.3e-19
Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 0


Query: 42  KEGSVSLMQMSKRSSSALYDYQSNKRLFYASILTSPTTSGVTASFGILGDIIIAEPNAYI 101
           +EGS+SLMQM+K  SS L DYQS+K+LFY SILTSPTT GVTASFG+LGDIIIAEP AYI
Sbjct: 370 QEGSLSLMQMAK-ISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYI 429

Query: 102 AFA 105
           AFA
Sbjct: 430 AFA 431

The following BLAST results are available for this feature:

BLAST of CmaCh00G003060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B1A944	5.5e-21	85.71	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q09MG9	5.5e-21	85.71	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
A0A344	5.5e-21	85.71	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
A0ZZ44	5.5e-21	85.71	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q2L915	5.5e-21	85.71	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]

BLAST of CmaCh00G003060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A394D0E3	2.8e-20	68.42	Cytochrome f OS=Lupinus angustifolius OX=3871 GN=TanjilG_00182 PE=3 SV=1	[more]
A0A3Q7G2U6	2.4e-19	57.52	CoA carboxyltransferase N-terminal domain-containing protein OS=Solanum lycopers...	[more]
A0A4U5MZQ8	2.4e-19	54.55	Cytochrome f OS=Populus alba OX=43335 GN=D5086_0000290460 PE=3 SV=1	[more]
A0A5C7HVS3	7.0e-19	81.82	Photosystem I assembly protein Ycf4 OS=Acer yangbiense OX=1000413 GN=EZV62_01225...	[more]
A0A650G791	9.1e-19	87.30	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]

BLAST of CmaCh00G003060 vs. NCBI nr


Match Name	E-value	Identity	Description
OIW17040.1	5.9e-20	68.42	hypothetical protein TanjilG_00182 [Lupinus angustifolius]	[more]
TKR74942.1	5.0e-19	54.55	acetyl-CoA carboxylase beta subunit [Populus alba]	[more]
TXG60895.1	1.4e-18	81.82	hypothetical protein EZV62_012258 [Acer yangbiense]	[more]
AWI72096.1	1.9e-18	87.30	acetyl-CoA carboxylase carboxyltransferase beta subunit [Thyrsanthella difformis...	[more]
QBC72849.1	1.9e-18	87.30	acetyl-CoA carboxylase carboxyltransferase beta subunit [Viburnum cylindricum]	[more]

BLAST of CmaCh00G003060 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00500.1	5.3e-19	79.37	acetyl-CoA carboxylase carboxyl transferase subunit beta	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000438	Acetyl-CoA carboxylase carboxyl transferase, beta subunit	PRINTS	PR01070	ACCCTRFRASEB	coord: 35..53 score: 47.14 coord: 74..91 score: 79.23
None	No IPR available	GENE3D	3.90.226.10		coord: 38..136 e-value: 9.9E-14 score: 53.1
None	No IPR available	PANTHER	PTHR42995:SF5	ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTIC	coord: 39..105
None	No IPR available	PANTHER	PTHR42995	FAMILY NOT NAMED	coord: 39..105
IPR011762	Acetyl-coenzyme A carboxyltransferase, N-terminal	PROSITE	PS50980	COA_CT_NTER	coord: 1..143 score: 17.336498
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 42..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G003060.1	CmaCh00G003060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:2001295	malonyl-CoA biosynthetic process
biological_process	GO:0015979	photosynthesis
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0009317	acetyl-CoA carboxylase complex
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0031361	integral component of thylakoid membrane
cellular_component	GO:0005634	nucleus
cellular_component	GO:0009522	photosystem I
molecular_function	GO:0020037	heme binding
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0003989	acetyl-CoA carboxylase activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0016743	carboxyl- or carbamoyltransferase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008270	zinc ion binding