CmaCh00G002880 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G002880
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	cyclic nucleotide-gated ion channel 1-like
Location	Cma_Chr00: 22607167 .. 22611903 (+)
RNA-Seq Expression	CmaCh00G002880
Synteny	CmaCh00G002880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCTCACATTGGCCTTTGCTTTACCACCTGATTGAAGGGATTTTCAGCCTTCTCAGCCCTTCTGGCTTCCATTCAACAACCTAAAGAACATGTTTTTCTTTATAAGCTTAAGTACCACTTCTTGCCTTTCATGCAAGTGACCATATTTATGGGTTCCCAGATACCAAAAACTGTAAGGTCTGAACATTCTTAACTCTCTCTGTGACTTTCTTTAAGGAAACCTAGTTCTTGTTGTTCCAATTGTTTTTCTTAGTTCAACGACATGATCTTGAATATGTTTTAACCTGTTTCCACTAATATTATGTTTCATAAATGACTTAGCTTGGGTTGACGTTGTTTCTATCAACATTGATATATACTCCCTTGATCAAATAGGTTTCAACCAACTTCTGACTTCCATGACAAATATGGAGGCTACCAAAACAGAAGCAGACTGTCTCCAAGCTCAATGTTGGAATGTTTACACAGAGGATTAACACAAATAGGCTTCAAACCAGAATTTTGGAAGAAAATTCTTGATCCACAGAAGTCATTTCTTCAGCAATGGAACAAGATATTTGTGCTGTCCTCTGTCATAGCAGTAGCTGTGGACCCTATCTTCTTTTACGTTCCAGTATTTGATAAAGACCGTCAATGCCTAACCATGGACCAAGATCTTATGACCATTACTTGTGTTCTTCGTTCATTCATTGACTTATTTTATCTACTTCACATGATCTTTGAGTTTCGAACTGGTTTTCTTCCCCCTTCTTTGCCTGTGTTTGGAAGTGGTGAATTAATTGAAGACCCAGCAGCTATAGCAAAGAGATATCTTTTCTCAAACTTCTTGATTGATATCTTATCCATTCTCCCACTGCCTCAGGTATAATTTATTTGGAATGTTACATATTGGTTGATGAGGAGCTCTTTAAAGCACAGTCCAAAATCTTCTCTTTCTTCACATATTACGAACACCCTGTGCTTGTTTTGTTCTGTATCCCGCTTGAGAGTGGTTTATGTTAGGAGTCACGACTCTCCACAATAGTATGATATTGTCCACTTTGAGAATAAGCTTTCATGGCTTTTCTTTGGACTTCCCCAAAAGGCCTCATACGAATGGAGTTGTATTCTTTACTAATAAACCCATGATCATTTTCTAAATTAGCCAATGTGGGACTCCCTCCCGACAATCCTCTGCTCGAACAAAGTACACTATAGAGCCTCCCCTAAGATCTATGGAGCCCTCGAACAGCCTCTCCTTAATTGAGACTCGACTCCTTCTCTGGAGTCATCGAACAAAGTACACCATTTGTTCGACACTTGAGTCACTTTTGACTACACCTTCGAGGCTCATAACTTCTTTGTTCGACATTTGAGAATTCTATTGACATGGCTAAGTTAAGGACATGAATCTGATACCATGTTAGGACTCACGACTCTCTACAATGGTATGATATTGTTCACTTTGAGCATAAACTCTCATGGTTTTGCTTTGGGCATCTCCAAAGGGCCTCATAACAATGGAGATGTATTCCTTACTTATAAACCCATGATCATTTCCTAAATTAGCCAACGTGGGACCCTCCCAACCATCCTCAATTGGATAGATTCTTGTGAATCATTTGTTTGAAGTAGCATTGATTGTCTCACTTAAGCGAACTTACTATTTAAGATAACATAGTCTTTTCATGTGTTTCAGCTTTTAGTATTAGTAATCATACCTGCAGCGAAAGATCCAATTCCAACAAAGACAGAGAACATCGTGAAGATTGCGGTTCTTTTGCAGTATATTCCTAGGCTTCTTCGAATTTATCCACAATACAGAGAAGTAACCAAAAACTCTGGCATACTGACAGAAACTGCTTGGAGTGGAGCTGCCTTCAATCTTCTTATTTATTTGCAAGCTTGTCATGTATGTGTTCATTTGATTTTATAGCCATCCAAAAACCACCCCTTTTTATGTTTCGGTTTAAAAGAAGTTCTCTTATAAGCAGTGAATTTGATGATCAGGTTGTTGGTGCCATTTGGTATTTGTTATCAATAGAACGCCAAACCAAATGCTGGCTTGTGGCATGCATGAAAGATGACTGTAGAGACAATTTTTTGTACTGTGAACGTCGTAGTGAAGCAATGTCCTCTTCTACAATTAAGTTTTGCTCTCCTAAGAAATCTGACAAGACAAACACCTTCGACTTTGGGATGTATGCTAAAGCCCTTGAGTTTGACTTTACCAAGACGAGTTTTAGCCACAAATTCTTCCATTCATTCTGGTGGGCTCTGCAAAACGTCAGGTTGGTAAAAGTTTTCCATTGTGACATCGGTTGGAGAGGAGAACAAAACATTTCTTATAAGGGCCGGAAACCTCTCCTTAGTAGACGCGTTTAAAAACTGTGAGGTTGATGGTGATACGTAACAAGCCAAAGCAGACAATGTCTGCAAGTGGGCTTGAGCGGTTACAAATGGTGTCAGAGCCAGACATTGAGTGGCGTGTCAGCGAGGACGCTGAGCTTCTAAAGGGGGTGGATTGTGAGATCCCACATCGATTGGAGAGGGGAACGAAATATTTCTTATAAGGGTGTGAAAAACTCTCCCTAGTAGACACGTTTTAAAACCATGAGGCTGACTGCGATACATAACGGACCAAAGCAGACAATATCTGCTAGTTGTGGGCTTGAGCTGTTACAAATAGTATCAAAGCTAGACACTGAGTGGTGTGCCAACAAGGACGTTGGGCTCCCAAGAGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGAGAATGAAACATTCCTCATAAGGGTGTGGAAACCTCTCCCTAGTAGACATGTTTTAAAACCGTGAGGCTGACGGCGATATGTAACAGGCCAAAGTAGAAAATATCTACTAGTGGTGGGCTTGGACCATTACAAATGGTATCAGGGTCAGACACTGAGTGGTGTGCCAACAAGGACGCTGGGCTCCCAAGGGGGTGGATTGTGAGATCACACATCAGTTAGAGAGGAGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACACGTTTTAAAACTGTGAGGCTAGCAGCGATACATAACAGACCAAAGCAGACAATATCTGCTAGTGGTGGGCTTGGGCTGTTACATCATGTTTCTCCATCACTTAACTACTTTACTAGAGAATTTGATATGATATGTGTGAAGCTATTGTTATAAGCTCCAAGTTTCCCAGATAATCTTAAGTTAATGCTTTGGGGCTACATACACTTTAAAAGAACTTGCTTGTCTCGTTACAGCTCAAGTGGACAAAACCTTAAAGTAAGCAACTACATGGGGGAGGTTCTTTTTGCTGTCTTCATAGCCATCCTTGGTTTGGTTTTATTTGCCTTACTCATTAGCAATGTTCAGGTCATTCATGTCTCTGATATCATCACTCTTCCATATTCTATAACTCATTCCCTTTCTAACTGCTCCAACTTTCTAACTGTGAATCATTCCCCTTGGGACAGAAATACCTTCAGTCAACAACTGTTAAAATAGAGCAGATGAGAATCAACCGACGAGATATCGAGCATTGGATGGCACATCGTATCCTCCCGGAGGACTTAAGGCAGCGTGTTAGACGATACGATCAATACAAATGGCAGCTAAACAGAGGAGTTAAGGAAGAGGAACTCATTACTAACCTTCCTAAAGACCTTAGGAAAGACATCAAACGCCATCTTTGCTTGTCCCTTCTTAAAAAAGTGAGTTCTTTTCAAATTTTGTCATGTTCCGATGCCTATTTATATTAAAAGATTTGATAAAGATATATATGGTAGATATTTCGTAAAGATTTGGTAGAGATATATTTGGTAGGTGGTTGAATCTGTTAAAACTATATTTAATAAACGGAAACAATATAAGCACTTTGTATTCCCTCTTCATGTACATACCTGAAGTCATCGGACGAAACTTTCATTGTTTGTTAACTCCAAATGGTTTAGGTGACACTTTTTAGCAACATGGACAAGCATCTACTAGACTCAATGTGCGAATATCTCAAGCCTGTGTTATTCACAAAGAGTAGCTTCATTCTGCAAGAGGGTGACCCAATTGATACTATGCTATTCATCATGAAAGGAAAGCTATCTAACATTATAACTTTTGGTTGGAACAACAAGCCTTACACGGACATACTTAAAGCAGGCGACTTTTGTGGTGAAGAGCTAGTTCAATGGGCAATGGATCCAACCTCCACTTCTCTTCCCATTTCAGCTAGAACAGTTGAATCTCTTACTGAGGTTGAAGCCTTTGCTTTAAAGGCTGATGAGCTGAAATTTGTGACCAGTCAGTTCCATTTCCAGCGCCTTAATAGCAAGCAATTTCAGCTCAGAGTGAGGCATGTTTATATGAACTGTTGCTTTGATTCAGCTGCTGCTGAAGTGATTGATATGTAATAGTTTTTCATTTTTTTAGATTCTATTCTCATCAATGGAAAGTTTGGGCTGCCTATAAGGTACAAGAAGCTTGGCATGATTACGTTGAAAGAAAGAAGAGAGGGGGTGGAGATGGTAGATTTCAAGATGCATTGGCTAAGATAGTTGGTGTCTCGGCGAGCTTTGGCGCCACTCTATATGCATCCATGTTTATATCATATCTGTTGCTTGCTGTGCAGCGAGATCAACACCAGAAAACTGCTCCTTTAACACGAGTGATGACGCTACCGCCGCCTCCAAAGCCAGACGATAAGCAAGACGAGCCAAATTTCACCATCTTGAATCGTTAA

mRNA sequence

ACCTCACATTGGCCTTTGCTTTACCACCTGATTGAAGGGATTTTCAGCCTTCTCAGCCCTTCTGGCTTCCATTCAACAACCTAAAGAACATGTTTTTCTTTATAAGCTTAAGTACCACTTCTTGCCTTTCATGCAAGTGACCATATTTATGGGTTCCCAGATACCAAAAACTGTAAGGTTTCAACCAACTTCTGACTTCCATGACAAATATGGAGGCTACCAAAACAGAAGCAGACTGTCTCCAAGCTCAATGTTGGAATGTTTACACAGAGGATTAACACAAATAGGCTTCAAACCAGAATTTTGGAAGAAAATTCTTGATCCACAGAAGTCATTTCTTCAGCAATGGAACAAGATATTTGTGCTGTCCTCTGTCATAGCAGTAGCTGTGGACCCTATCTTCTTTTACGTTCCAGTATTTGATAAAGACCGTCAATGCCTAACCATGGACCAAGATCTTATGACCATTACTTGTGTTCTTCGTTCATTCATTGACTTATTTTATCTACTTCACATGATCTTTGAGTTTCGAACTGGTTTTCTTCCCCCTTCTTTGCCTGTGTTTGGAAGTGGTGAATTAATTGAAGACCCAGCAGCTATAGCAAAGAGATATCTTTTCTCAAACTTCTTGATTGATATCTTATCCATTCTCCCACTGCCTCAGCTTTTAGTATTAGTAATCATACCTGCAGCGAAAGATCCAATTCCAACAAAGACAGAGAACATCGTGAAGATTGCGGTTCTTTTGCAGTATATTCCTAGGCTTCTTCGAATTTATCCACAATACAGAGAAGTAACCAAAAACTCTGGCATACTGACAGAAACTGCTTGGAGTGGAGCTGCCTTCAATCTTCTTATTTATTTGCAAGCTTGTCATGTTGTTGGTGCCATTTGGTATTTGTTATCAATAGAACGCCAAACCAAATGCTGGCTTGTGGCATGCATGAAAGATGACTGTAGAGACAATTTTTTGTACTGTGAACGTCGTAGTGAAGCAATGTCCTCTTCTACAATTAAGTTTTGCTCTCCTAAGAAATCTGACAAGACAAACACCTTCGACTTTGGGATGTATGCTAAAGCCCTTGAGTTTGACTTTACCAAGACGAGTTTTAGCCACAAATTCTTCCATTCATTCTGGTGGGCTCTGCAAAACGTCAGCTCAAGTGGACAAAACCTTAAAGTAAGCAACTACATGGGGGAGGTTCTTTTTGCTGTCTTCATAGCCATCCTTGGTTTGGTTTTATTTGCCTTACTCATTAGCAATGTTCAGAAATACCTTCAGTCAACAACTGTTAAAATAGAGCAGATGAGAATCAACCGACGAGATATCGAGCATTGGATGGCACATCGTATCCTCCCGGAGGACTTAAGGCAGCGTGTTAGACGATACGATCAATACAAATGGCAGCTAAACAGAGGAGTTAAGGAAGAGGAACTCATTACTAACCTTCCTAAAGACCTTAGGAAAGACATCAAACGCCATCTTTGCTTGTCCCTTCTTAAAAAAGTGACACTTTTTAGCAACATGGACAAGCATCTACTAGACTCAATGTGCGAATATCTCAAGCCTGTGTTATTCACAAAGAGTAGCTTCATTCTGCAAGAGGGTGACCCAATTGATACTATGCTATTCATCATGAAAGGAAAGCTATCTAACATTATAACTTTTGGTTGGAACAACAAGCCTTACACGGACATACTTAAAGCAGGCGACTTTTGTGGTGAAGAGCTAGTTCAATGGGCAATGGATCCAACCTCCACTTCTCTTCCCATTTCAGCTAGAACAGTTGAATCTCTTACTGAGGTTGAAGCCTTTGCTTTAAAGGCTGATGAGCTGAAATTTGTGACCAGTCAGTTCCATTTCCAGCGCCTTAATAGCAAGCAATTTCAGCTCAGAGTGAGATTCTATTCTCATCAATGGAAAGTTTGGGCTGCCTATAAGGTACAAGAAGCTTGGCATGATTACGTTGAAAGAAAGAAGAGAGGGGGTGGAGATGGTAGATTTCAAGATGCATTGGCTAAGATAGTTGGTGTCTCGGCGAGCTTTGGCGCCACTCTATATGCATCCATGTTTATATCATATCTGTTGCTTGCTGTGCAGCGAGATCAACACCAGAAAACTGCTCCTTTAACACGAGTGATGACGCTACCGCCGCCTCCAAAGCCAGACGATAAGCAAGACGAGCCAAATTTCACCATCTTGAATCGTTAA

Coding sequence (CDS)

ATGCAAGTGACCATATTTATGGGTTCCCAGATACCAAAAACTGTAAGGTTTCAACCAACTTCTGACTTCCATGACAAATATGGAGGCTACCAAAACAGAAGCAGACTGTCTCCAAGCTCAATGTTGGAATGTTTACACAGAGGATTAACACAAATAGGCTTCAAACCAGAATTTTGGAAGAAAATTCTTGATCCACAGAAGTCATTTCTTCAGCAATGGAACAAGATATTTGTGCTGTCCTCTGTCATAGCAGTAGCTGTGGACCCTATCTTCTTTTACGTTCCAGTATTTGATAAAGACCGTCAATGCCTAACCATGGACCAAGATCTTATGACCATTACTTGTGTTCTTCGTTCATTCATTGACTTATTTTATCTACTTCACATGATCTTTGAGTTTCGAACTGGTTTTCTTCCCCCTTCTTTGCCTGTGTTTGGAAGTGGTGAATTAATTGAAGACCCAGCAGCTATAGCAAAGAGATATCTTTTCTCAAACTTCTTGATTGATATCTTATCCATTCTCCCACTGCCTCAGCTTTTAGTATTAGTAATCATACCTGCAGCGAAAGATCCAATTCCAACAAAGACAGAGAACATCGTGAAGATTGCGGTTCTTTTGCAGTATATTCCTAGGCTTCTTCGAATTTATCCACAATACAGAGAAGTAACCAAAAACTCTGGCATACTGACAGAAACTGCTTGGAGTGGAGCTGCCTTCAATCTTCTTATTTATTTGCAAGCTTGTCATGTTGTTGGTGCCATTTGGTATTTGTTATCAATAGAACGCCAAACCAAATGCTGGCTTGTGGCATGCATGAAAGATGACTGTAGAGACAATTTTTTGTACTGTGAACGTCGTAGTGAAGCAATGTCCTCTTCTACAATTAAGTTTTGCTCTCCTAAGAAATCTGACAAGACAAACACCTTCGACTTTGGGATGTATGCTAAAGCCCTTGAGTTTGACTTTACCAAGACGAGTTTTAGCCACAAATTCTTCCATTCATTCTGGTGGGCTCTGCAAAACGTCAGCTCAAGTGGACAAAACCTTAAAGTAAGCAACTACATGGGGGAGGTTCTTTTTGCTGTCTTCATAGCCATCCTTGGTTTGGTTTTATTTGCCTTACTCATTAGCAATGTTCAGAAATACCTTCAGTCAACAACTGTTAAAATAGAGCAGATGAGAATCAACCGACGAGATATCGAGCATTGGATGGCACATCGTATCCTCCCGGAGGACTTAAGGCAGCGTGTTAGACGATACGATCAATACAAATGGCAGCTAAACAGAGGAGTTAAGGAAGAGGAACTCATTACTAACCTTCCTAAAGACCTTAGGAAAGACATCAAACGCCATCTTTGCTTGTCCCTTCTTAAAAAAGTGACACTTTTTAGCAACATGGACAAGCATCTACTAGACTCAATGTGCGAATATCTCAAGCCTGTGTTATTCACAAAGAGTAGCTTCATTCTGCAAGAGGGTGACCCAATTGATACTATGCTATTCATCATGAAAGGAAAGCTATCTAACATTATAACTTTTGGTTGGAACAACAAGCCTTACACGGACATACTTAAAGCAGGCGACTTTTGTGGTGAAGAGCTAGTTCAATGGGCAATGGATCCAACCTCCACTTCTCTTCCCATTTCAGCTAGAACAGTTGAATCTCTTACTGAGGTTGAAGCCTTTGCTTTAAAGGCTGATGAGCTGAAATTTGTGACCAGTCAGTTCCATTTCCAGCGCCTTAATAGCAAGCAATTTCAGCTCAGAGTGAGATTCTATTCTCATCAATGGAAAGTTTGGGCTGCCTATAAGGTACAAGAAGCTTGGCATGATTACGTTGAAAGAAAGAAGAGAGGGGGTGGAGATGGTAGATTTCAAGATGCATTGGCTAAGATAGTTGGTGTCTCGGCGAGCTTTGGCGCCACTCTATATGCATCCATGTTTATATCATATCTGTTGCTTGCTGTGCAGCGAGATCAACACCAGAAAACTGCTCCTTTAACACGAGTGATGACGCTACCGCCGCCTCCAAAGCCAGACGATAAGCAAGACGAGCCAAATTTCACCATCTTGAATCGTTAA

Protein sequence

MQVTIFMGSQIPKTVRFQPTSDFHDKYGGYQNRSRLSPSSMLECLHRGLTQIGFKPEFWKKILDPQKSFLQQWNKIFVLSSVIAVAVDPIFFYVPVFDKDRQCLTMDQDLMTITCVLRSFIDLFYLLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLFSNFLIDILSILPLPQLLVLVIIPAAKDPIPTKTENIVKIAVLLQYIPRLLRIYPQYREVTKNSGILTETAWSGAAFNLLIYLQACHVVGAIWYLLSIERQTKCWLVACMKDDCRDNFLYCERRSEAMSSSTIKFCSPKKSDKTNTFDFGMYAKALEFDFTKTSFSHKFFHSFWWALQNVSSSGQNLKVSNYMGEVLFAVFIAILGLVLFALLISNVQKYLQSTTVKIEQMRINRRDIEHWMAHRILPEDLRQRVRRYDQYKWQLNRGVKEEELITNLPKDLRKDIKRHLCLSLLKKVTLFSNMDKHLLDSMCEYLKPVLFTKSSFILQEGDPIDTMLFIMKGKLSNIITFGWNNKPYTDILKAGDFCGEELVQWAMDPTSTSLPISARTVESLTEVEAFALKADELKFVTSQFHFQRLNSKQFQLRVRFYSHQWKVWAAYKVQEAWHDYVERKKRGGGDGRFQDALAKIVGVSASFGATLYASMFISYLLLAVQRDQHQKTAPLTRVMTLPPPPKPDDKQDEPNFTILNR

Homology

[Close]

BLAST of CmaCh00G002880 vs. ExPASy Swiss-Prot
Match: O65717 (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 665.6 bits (1716), Expect = 6.0e-190
Identity = 362/702 (51.57%), Postives = 481/702 (68.52%), Query Frame = 0


Query: 6   FMGSQIPKTVRFQPT-SDFHDKYGGYQNRSRLSPSSMLECLHRGLTQIGFKPEFWK---- 65
           + G    +T  FQ T S   DK+     RS  S S+ ++   R      FK    K    
Sbjct: 25  YSGKNEIQTGIFQRTISSISDKF----YRSFESSSARIKLFKRSYKSYSFKEAVSKGIGS 84

Query: 66  --KILDPQKSFLQQWNKIFVLSSVIAVAVDPIFFYVPVFDKDRQCLTMDQDLMTITCVLR 125
             KILDPQ  FLQ+WNKIFVL+ +IAV++DP+FFYVP+ D  ++CL +D+ +     VLR
Sbjct: 85  THKILDPQGPFLQRWNKIFVLACIIAVSLDPLFFYVPIIDDAKKCLGIDKKMEITASVLR 144

Query: 126 SFIDLFYLLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLFSNFLIDILSILPLPQ 185
           SF D+FY+LH+IF+FRTGF+ PS  VFG G L+ED   IAKRYL S+F+IDIL++LPLPQ
Sbjct: 145 SFTDVFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDKREIAKRYLSSHFIIDILAVLPLPQ 204

Query: 186 LLVLVIIPAAKDPIPTKTENIVKIAVLLQYIPRLLRIYPQYREVTKNSGILTETAWSGAA 245
           +++L+IIP  +      T+N++K  V  QYIPR +RIYP Y+EVT+ SGILTETAW+GAA
Sbjct: 205 MVILIIIPHMRGSSSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGAA 264

Query: 246 FNLLIYLQACHVVGAIWYLLSIERQTKCWLVACMKDD--CRDNFLYCERRSEAMSSSTIK 305
           FNL +Y+ A HV GA WYL SIER+T CW  AC +++  C    LYC+  +   ++   +
Sbjct: 265 FNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETAGGNAFLNE 324

Query: 306 FCSPKKSDKTNTFDFGMYAKALEFDFTKT-SFSHKFFHSFWWALQNVSSSGQNLKVSNYM 365
            C P ++  T  FDFG++  AL+    ++  F  KFF+ FWW LQN+SS GQNLK S Y+
Sbjct: 325 SC-PIQTPNTTLFDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNLSSLGQNLKTSTYI 384

Query: 366 GEVLFAVFIAILGLVLFALLISNVQKYLQSTTVKIEQMRINRRDIEHWMAHRILPEDLRQ 425
            E+ FAVFI+I GLVLF+ LI N+Q YLQSTT ++E+MR+ RRD E WM+HR+LPE+LR+
Sbjct: 385 WEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPENLRK 444

Query: 426 RVRRYDQYKWQLNRGVKEEELITNLPKDLRKDIKRHLCLSLLKKVTLFSNMDKHLLDSMC 485
           R+RRY+QYKWQ  RGV EE L++NLPKDLR+DIKRHLCL+LL +V +F  MD+ LLD++C
Sbjct: 445 RIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDALC 504

Query: 486 EYLKPVLFTKSSFILQEGDPIDTMLFIMKGKLSNIIT----FGWNNKPYTDILKAGDFCG 545
           + L+PVL+T+ S+I++EGDP+D MLFIM+GKL  I T     G+ N  Y   L AGDFCG
Sbjct: 505 DRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLNSEY---LGAGDFCG 564

Query: 546 EELVQWAMDP-TSTSLPISARTVESLTEVEAFALKADELKFVTSQFHFQRLNSKQFQLRV 605
           EEL+ WA+DP +S++LPIS RTV +L EVEAFALKAD+LKFV SQ  F+RL+SKQ +   
Sbjct: 565 EELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVASQ--FRRLHSKQLRHTF 624

Query: 606 RFYSHQWKVWAAYKVQEAWHDYVERKKRGG---GDGRFQDALAK-IVGVSASFGATLYAS 665
           R+YS QWK WAA  +Q AW  Y+++K        + R QDALAK   G S S GAT+YAS
Sbjct: 625 RYYSQQWKTWAACFIQAAWRRYIKKKLEESLKEEENRLQDALAKEACGSSPSLGATIYAS 684

Query: 666 MFISYLLLAVQRDQHQKTAPLTR---VMTLPPPPKPDDKQDE 686
            F + +L  ++R    +   +      M L  P +PD   D+
Sbjct: 685 RFAANILRTIRRSGSVRKPRMPERMPPMLLQKPAEPDFNSDD 716

[Close]

BLAST of CmaCh00G002880 vs. ExPASy Swiss-Prot
Match: Q9LD40 (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana OX=3702 GN=CNGC13 PE=3 SV=2)

HSP 1 Score: 637.5 bits (1643), Expect = 1.8e-181
Identity = 345/704 (49.01%), Postives = 477/704 (67.76%), Query Frame = 0


Query: 15  VRFQPTSDFHDKYGGYQNRSRLSPSSMLECLHRGLTQ-IGF-----------KPEFWKKI 74
           VRF+       +YG  +N++R S +++L+ + RGL + + F                K I
Sbjct: 9   VRFRDWISEGTEYGYGRNKARPSLNTVLKNVRRGLKKPLSFGSHNKKRDSNSSTTTQKNI 68

Query: 75  LDPQKSFLQQWNKIFVLSSVIAVAVDPIFFYVPVFDKDRQCLTMDQDLMTITCVLRSFID 134
           ++PQ SFLQ WNKIF+ +SVIA+A+DP+FFY+P+ D +R CL + ++L     VLR+FID
Sbjct: 69  INPQGSFLQNWNKIFLFASVIALAIDPLFFYIPIVDGERHCLNLHRNLEIAASVLRTFID 128

Query: 135 LFYLLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLFSNFLIDILSILPLPQLLVL 194
            FY++H++F+FRT ++ PS  VFG GEL++DP AIA +YL S F+ID+LSILPLPQL+VL
Sbjct: 129 AFYIIHIVFQFRTAYISPSSRVFGRGELVDDPKAIAIKYLSSYFIIDLLSILPLPQLVVL 188

Query: 195 VIIPAAKDPIPTKTENIVKIAVLLQYIPRLLRIYPQYREVTKNSGILTETAWSGAAFNLL 254
            +IP    P+   T++ +   +  QYIPR+LRIYP Y EVT+ SGI+TETAW+GAA+NL 
Sbjct: 189 AVIPNVNKPVSLITKDYLITVIFTQYIPRILRIYPLYTEVTRTSGIVTETAWAGAAWNLS 248

Query: 255 IYLQACHVVGAIWYLLSIERQTKCWLVACMK--DDCRDNFLYCERRSEAMS---SSTIKF 314
           +Y+ A HV GA+WYL+S+ER+ +CW  AC K  + C   FLYC+  S   +   +++  F
Sbjct: 249 LYMLASHVFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCDGNSSVRNDFLTTSCPF 308

Query: 315 CSPKKSDKTNTFDFGMYAKALEFDFTKT-SFSHKFFHSFWWALQNVSSSGQNLKVSNYMG 374
            +P     +  F+FG++  AL+    ++  F  KFF+ FWW L+N+S+ GQNL  S ++G
Sbjct: 309 INPDDITNSTVFNFGIFTDALKSGIVESDDFWKKFFYCFWWGLRNLSALGQNLNTSKFVG 368

Query: 375 EVLFAVFIAILGLVLFALLISNVQKYLQSTTVKIEQMRINRRDIEHWMAHRILPEDLRQR 434
           E++FAV I I GLVLFALLI N+QKYL+STTV+ E+MR+ +RD E WM+HR+LP+DLR+R
Sbjct: 369 EIIFAVSICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPDDLRKR 428

Query: 435 VRRYDQYKWQLNRGVKEEELITNLPKDLRKDIKRHLCLSLLKKVTLFSNMDKHLLDSMCE 494
           +RRY+QYKWQ  RGV+EE L+ NLPKDLR+DIKRH CL LLKKV LF  MD+ LLD++C+
Sbjct: 429 IRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVCD 488

Query: 495 YLKPVLFTKSSFILQEGDPIDTMLFIMKGKLSNIITFGWNNKPYTDI-LKAGDFCGEELV 554
            LKPVL+T++S+ ++EGDP++ MLF+M+GKL +  T G     +  + LK  DFCGE+L+
Sbjct: 489 KLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNAVYLKPSDFCGEDLL 548

Query: 555 QWAMDPTSTS-LPISARTVESLTEVEAFALKADELKFVTSQFHFQRLNSKQFQLRVRFYS 614
            WA+DP S+S  PIS RTV++LTEVEAFAL AD+LK V SQ  F+RL+SKQ Q   RFYS
Sbjct: 549 TWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVASQ--FRRLHSKQLQHTFRFYS 608

Query: 615 HQWKVWAAYKVQEAWHDYVERKKRGG---GDGRFQDALAK---IVGVSASFGATLYASMF 674
            QW+ W A  +Q AW  +  RK        + RF++A+ K       S+S  ATLYAS F
Sbjct: 609 VQWRTWGASFIQAAWRRHCRRKLARSLTEEEDRFRNAITKRERNAASSSSLVATLYASRF 668

Query: 675 ISYLLLAVQRDQHQKTAPLTRVMTLPPPPKPDDKQDEPNFTILN 693
            S  L    R+      PL        PPKP     EP+F++ N
Sbjct: 669 ASNAL----RNLRTNNLPLL-------PPKP----SEPDFSLRN 695

[Close]

BLAST of CmaCh00G002880 vs. ExPASy Swiss-Prot
Match: Q9LNJ0 (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana OX=3702 GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 622.1 bits (1603), Expect = 7.7e-177
Identity = 325/648 (50.15%), Postives = 450/648 (69.44%), Query Frame = 0


Query: 60  KKILDPQKSFLQQWNKIFVLSSVIAVAVDPIFFYVPVFDKDRQCLTMDQDLMTITCVLRS 119
           K I++PQ SFLQ WNKIF+ + V+A+A+DP+FFY+P+ D  R CLT+D  L     +LR+
Sbjct: 66  KNIINPQDSFLQNWNKIFLFACVVALAIDPLFFYIPIVDSARHCLTLDSKLEIAASLLRT 125

Query: 120 FIDLFYLLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLFSNFLIDILSILPLPQL 179
            ID FY++H++F+FRT ++ PS  VFG GEL++D  AIA +YL S F+ID+LSILPLPQ+
Sbjct: 126 LIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYLSSYFIIDLLSILPLPQI 185

Query: 180 LVLVIIPAAKDPIPTKTENIVKIAVLLQYIPRLLRIYPQYREVTKNSGILTETAWSGAAF 239
           +VL +IP+   P+   T++ +K +++ QY+PR+LR+YP Y EVT+ SGI+TETAW+GAA+
Sbjct: 186 VVLAVIPSVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGAAW 245

Query: 240 NLLIYLQACHVVGAIWYLLSIERQTKCWLVACMK-DDCRDNFLYCERR---SEAMSSSTI 299
           NL +Y+ A HV GA+WYL+S+ER+ +CW  AC K   C   FLYCE     S    +++ 
Sbjct: 246 NLSLYMLASHVFGALWYLISVEREDRCWQEACEKTKGCNMKFLYCENDRNVSNNFLTTSC 305

Query: 300 KFCSPKKSDKTNTFDFGMYAKALEFDFTKT-SFSHKFFHSFWWALQNVSSSGQNLKVSNY 359
            F  P     +  F+FG++  AL+    ++  F  KFF+ FWW L+N+S+ GQNL+ S +
Sbjct: 306 PFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLRNLSALGQNLQTSKF 365

Query: 360 MGEVLFAVFIAILGLVLFALLISNVQKYLQSTTVKIEQMRINRRDIEHWMAHRILPEDLR 419
           +GE++FA+ I I GLVLFALLI N+QKYL+STTV+ E+MR+ +RD E WM+HR+LPEDLR
Sbjct: 366 VGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPEDLR 425

Query: 420 QRVRRYDQYKWQLNRGVKEEELITNLPKDLRKDIKRHLCLSLLKKVTLFSNMDKHLLDSM 479
           +R+RRY+QY+WQ  RGV+EE L+ NLPKDLR+DIKRHLCL LLKKV LF  MD+ LLD++
Sbjct: 426 KRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAV 485

Query: 480 CEYLKPVLFTKSSFILQEGDPIDTMLFIMKGKLSNIITFGWNNKPYTDI-LKAGDFCGEE 539
           C+ L+PVL+T++S++++EGDP+  MLF+M+G+L +  T G  +  +  + LKA DFCGE+
Sbjct: 486 CDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGED 545

Query: 540 LVQWAMDPTSTS-LPISARTVESLTEVEAFALKADELKFVTSQFHFQRLNSKQFQLRVRF 599
           L+ WA+DP S+S  PIS RTV++LTEVEAFAL A++LK V SQ  F+RL+SKQ Q   RF
Sbjct: 546 LLPWALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSVASQ--FRRLHSKQLQHTFRF 605

Query: 600 YSHQWKVWAAYKVQEAWHDYVER---KKRGGGDGRFQDALAK--------IVGVSASFGA 659
           YS QW+ W+   +Q AW  Y  R   K     + R ++ALA          V  S S G 
Sbjct: 606 YSVQWRTWSVSFIQAAWRRYCRRKLAKSLRDEEDRLREALASQDKEHNAATVSSSLSLGG 665

Query: 660 TLYASMFISYLLLAVQRDQHQKTAPLTRVMTLPPPPKPDDKQDEPNFT 690
            LYAS F S  L     +     + L    TLP  P+   K  EP+FT
Sbjct: 666 ALYASRFASNAL----HNLRHNISNLPPRYTLPLLPQ---KPTEPDFT 704

[Close]

BLAST of CmaCh00G002880 vs. ExPASy Swiss-Prot
Match: Q9SKD7 (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana OX=3702 GN=CNGC3 PE=2 SV=2)

HSP 1 Score: 600.9 bits (1548), Expect = 1.8e-170
Identity = 311/638 (48.75%), Postives = 437/638 (68.50%), Query Frame = 0


Query: 61  KILDPQKSFLQQWNKIFVLSSVIAVAVDPIFFYVPVFDKDRQCLTMDQDLMTITCVLRSF 120
           ++++P  S+LQ WNKIF+L SV+A+A DP+FFY+P    +R CL +D+ L TI CV R+F
Sbjct: 71  RVMNPNDSYLQSWNKIFLLLSVVALAFDPLFFYIPYVKPERFCLNLDKKLQTIACVFRTF 130

Query: 121 IDLFYLLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLFSNFLIDILSILPLPQLL 180
           ID FY++HM+F+F TGF+ PS   FG GEL E    IA RYL S FLID+LSILP+PQ++
Sbjct: 131 IDAFYVVHMLFQFHTGFITPSSSGFGRGELNEKHKDIALRYLGSYFLIDLLSILPIPQVV 190

Query: 181 VLVIIPAAKDPIPTKTENIVKIAVLLQYIPRLLRIYPQYREVTKNSGILTETAWSGAAFN 240
           VL I+P  + P     + ++K  +  QY+PR+ RIYP ++EVT+ SG++TETAW+GAA N
Sbjct: 191 VLAIVPRMRRPASLVAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTETAWAGAALN 250

Query: 241 LLIYLQACHVVGAIWYLLSIERQTKCWLVACMK-DDCRDNFLYCERRSE---AMSSSTIK 300
           L +Y+ A HV G+ WYL+SIER+ +CW  AC K  +C   +LYC    E      + +  
Sbjct: 251 LFLYMLASHVFGSFWYLISIERKDRCWREACAKIQNCTHAYLYCSPTGEDNRLFLNGSCP 310

Query: 301 FCSPKKSDKTNTFDFGMYAKALEFDFTKT-SFSHKFFHSFWWALQNVSSSGQNLKVSNYM 360
              P++   +  F+FG++A AL+    ++  F  KFF+ FWW L+N+S+ GQNLK S + 
Sbjct: 311 LIDPEEITNSTVFNFGIFADALQSGVVESRDFPKKFFYCFWWGLRNLSALGQNLKTSAFE 370

Query: 361 GEVLFAVFIAILGLVLFALLISNVQKYLQSTTVKIEQMRINRRDIEHWMAHRILPEDLRQ 420
           GE++FA+ I I GLVLFALLI N+QKYLQSTTV++E+MR+ RRD E WM+HR+LP+DLR+
Sbjct: 371 GEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMSHRMLPDDLRK 430

Query: 421 RVRRYDQYKWQLNRGVKEEELITNLPKDLRKDIKRHLCLSLLKKVTLFSNMDKHLLDSMC 480
           R+R+Y+QYKWQ  +GV+EE L+++LPKDLRKDIKRHLCL LLKKV  F  MD  LLD++C
Sbjct: 431 RIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCLKLLKKVPWFQAMDDRLLDALC 490

Query: 481 EYLKPVLFTKSSFILQEGDPIDTMLFIMKGKLSNIITFGWNNKPYTDI-LKAGDFCGEEL 540
             LK VL+T+ S+I++EG+P++ MLFIM+G L +  T+G     +  + L AGDFCG +L
Sbjct: 491 ARLKTVLYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLVAGDFCG-DL 550

Query: 541 VQWAMDPTSTSLPISARTVESLTEVEAFALKADELKFVTSQFHFQRLNSKQFQLRVRFYS 600
           + WA+DP S+  PIS+RTV++LTEVE F L AD+LKFV +Q  ++RL+SKQ +   RFYS
Sbjct: 551 LTWALDPLSSQFPISSRTVQALTEVEGFLLSADDLKFVATQ--YRRLHSKQLRHMFRFYS 610

Query: 601 HQWKVWAAYKVQEAWHDYVERKKRGG---GDGRFQDALAK--IVGVSASFGATLYASMFI 660
            QW+ WAA  +Q AW  +  RK        +G+  + L      G   + GA +YAS F 
Sbjct: 611 VQWQTWAACFIQAAWKRHCRRKLSKALREEEGKLHNTLQNDDSGGNKLNLGAAIYASRFA 670

Query: 661 SYLLLAVQRDQHQKTAPLTRVMTLPP--PPKPDDKQDE 686
           S+ L  ++ +   + +    ++TL P  P  P+   DE
Sbjct: 671 SHALRNLRANAAARNSRFPHMLTLLPQKPADPEFPMDE 705

[Close]

BLAST of CmaCh00G002880 vs. ExPASy Swiss-Prot
Match: Q8RWS9 (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana OX=3702 GN=CNGC5 PE=2 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 6.3e-163
Identity = 305/637 (47.88%), Postives = 420/637 (65.93%), Query Frame = 0


Query: 60  KKILDPQKSFLQQWNKIFVLSSVIAVAVDPIFFYVPVFDKDRQCLTMDQDLMTITCVLRS 119
           KKI DPQ  FL   NK+FV S +++V VDP FFY+PV + + +CL +D+ L      LR+
Sbjct: 86  KKIFDPQDKFLLYCNKLFVASCILSVFVDPFFFYLPVINAESKCLGIDRKLAITASTLRT 145

Query: 120 FIDLFYLLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLFSNFLIDILSILPLPQL 179
           FID+FYL HM  + RT ++ PS  VFG GEL+ DPA IAKRYL   F+ID LS+LPLPQ+
Sbjct: 146 FIDVFYLAHMALQLRTAYIAPSSRVFGRGELVIDPAQIAKRYLQRWFIIDFLSVLPLPQI 205

Query: 180 LVLVIIPAAKDPIPTKTENIVKIAVLLQYIPRLLRIYPQYREVTKNSGILTETAWSGAAF 239
           +V   + ++       T+  +   VL+QYIPR LR+ P   E+ + +G+  ETAW+GAA+
Sbjct: 206 VVWRFLQSSNGSDVLATKQALLFIVLVQYIPRFLRVLPLTSELKRTAGVFAETAWAGAAY 265

Query: 240 NLLIYLQACHVVGAIWYLLSIERQTKCWLVACM-KDDCRDNFLYCERR--------SEAM 299
            LL+Y+ A H+VGA WYLL++ER   CW  AC+   +C  +FLYC  +        + A 
Sbjct: 266 YLLLYMLASHIVGAFWYLLALERNDACWQEACIDAGNCSTDFLYCGNQNMDGYAVWNRAK 325

Query: 300 SSSTIKFCSPKKSDKTNTFDFGMYAKALEFDFTKT-SFSHKFFHSFWWALQNVSSSGQNL 359
            S     C     D    FDFG+Y +AL      + +F  K+ +  WW LQN+S+ GQ L
Sbjct: 326 ESVLKSKCRADLDDNNPPFDFGIYTQALSSGIVSSQNFIVKYCYCLWWGLQNLSTLGQGL 385

Query: 360 KVSNYMGEVLFAVFIAILGLVLFALLISNVQKYLQSTTVKIEQMRINRRDIEHWMAHRIL 419
           + S Y  E++F++ +AI GL+LFALLI N+Q YLQS T+++E+MR+ RRD E WM HR+L
Sbjct: 386 ETSTYPMEIIFSISLAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRML 445

Query: 420 PEDLRQRVRRYDQYKWQLNRGVKEEELITNLPKDLRKDIKRHLCLSLLKKVTLFSNMDKH 479
           P+DLR+RVRRYDQYKW   RGV EE L+ NLPKDLR+DIKRHLCL+L+++V LF +MD  
Sbjct: 446 PQDLRERVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHLCLALVRRVPLFKSMDDK 505

Query: 480 LLDSMCEYLKPVLFTKSSFILQEGDPIDTMLFIMKGKLSNIITFGWNNKPYT-DILKAGD 539
           LLD++C  LKP LFT+S+++++EGDP+D MLFI++G+L ++ T G  +  +   +LK G+
Sbjct: 506 LLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGE 565

Query: 540 FCGEELVQWAMDPTS-TSLPISARTVESLTEVEAFALKADELKFVTSQFHFQRLNSKQFQ 599
           FCGEEL+ WA+DP S  +LP S RTV++LTEVEAFAL ++ELKFV SQ  F+RL+S+Q Q
Sbjct: 566 FCGEELLTWALDPKSGVNLPSSTRTVKALTEVEAFALTSEELKFVASQ--FRRLHSRQVQ 625

Query: 600 LRVRFYSHQWKVWAAYKVQEAWHDYVERKKRGGGDGRFQDALAKIVGVSASFGATLYASM 659
              RFYSHQW+ WAA  +Q AW  Y +RKK    +       +   G S S GA   A+ 
Sbjct: 626 HTFRFYSHQWRTWAACFIQAAWRRYCKRKKMEEAEAEAAAVSSSTAGPSYSIGAAFLATK 685

Query: 660 FISYLLLAVQRDQHQKTAPLTRVMTLPPPPKPDDKQD 685
           F +  L  + R+++ K   L +   L  PP+PD   D
Sbjct: 686 FAANALRTIHRNRNTKIRDLVK---LQKPPEPDFTAD 717

[Close]

BLAST of CmaCh00G002880 vs. TAIR 10
Match: AT5G53130.1 (cyclic nucleotide gated channel 1 )

HSP 1 Score: 665.6 bits (1716), Expect = 4.3e-191
Identity = 362/702 (51.57%), Postives = 481/702 (68.52%), Query Frame = 0


Query: 6   FMGSQIPKTVRFQPT-SDFHDKYGGYQNRSRLSPSSMLECLHRGLTQIGFKPEFWK---- 65
           + G    +T  FQ T S   DK+     RS  S S+ ++   R      FK    K    
Sbjct: 25  YSGKNEIQTGIFQRTISSISDKF----YRSFESSSARIKLFKRSYKSYSFKEAVSKGIGS 84

Query: 66  --KILDPQKSFLQQWNKIFVLSSVIAVAVDPIFFYVPVFDKDRQCLTMDQDLMTITCVLR 125
             KILDPQ  FLQ+WNKIFVL+ +IAV++DP+FFYVP+ D  ++CL +D+ +     VLR
Sbjct: 85  THKILDPQGPFLQRWNKIFVLACIIAVSLDPLFFYVPIIDDAKKCLGIDKKMEITASVLR 144

Query: 126 SFIDLFYLLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLFSNFLIDILSILPLPQ 185
           SF D+FY+LH+IF+FRTGF+ PS  VFG G L+ED   IAKRYL S+F+IDIL++LPLPQ
Sbjct: 145 SFTDVFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDKREIAKRYLSSHFIIDILAVLPLPQ 204

Query: 186 LLVLVIIPAAKDPIPTKTENIVKIAVLLQYIPRLLRIYPQYREVTKNSGILTETAWSGAA 245
           +++L+IIP  +      T+N++K  V  QYIPR +RIYP Y+EVT+ SGILTETAW+GAA
Sbjct: 205 MVILIIIPHMRGSSSLNTKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGAA 264

Query: 246 FNLLIYLQACHVVGAIWYLLSIERQTKCWLVACMKDD--CRDNFLYCERRSEAMSSSTIK 305
           FNL +Y+ A HV GA WYL SIER+T CW  AC +++  C    LYC+  +   ++   +
Sbjct: 265 FNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETAGGNAFLNE 324

Query: 306 FCSPKKSDKTNTFDFGMYAKALEFDFTKT-SFSHKFFHSFWWALQNVSSSGQNLKVSNYM 365
            C P ++  T  FDFG++  AL+    ++  F  KFF+ FWW LQN+SS GQNLK S Y+
Sbjct: 325 SC-PIQTPNTTLFDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNLSSLGQNLKTSTYI 384

Query: 366 GEVLFAVFIAILGLVLFALLISNVQKYLQSTTVKIEQMRINRRDIEHWMAHRILPEDLRQ 425
            E+ FAVFI+I GLVLF+ LI N+Q YLQSTT ++E+MR+ RRD E WM+HR+LPE+LR+
Sbjct: 385 WEICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPENLRK 444

Query: 426 RVRRYDQYKWQLNRGVKEEELITNLPKDLRKDIKRHLCLSLLKKVTLFSNMDKHLLDSMC 485
           R+RRY+QYKWQ  RGV EE L++NLPKDLR+DIKRHLCL+LL +V +F  MD+ LLD++C
Sbjct: 445 RIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDALC 504

Query: 486 EYLKPVLFTKSSFILQEGDPIDTMLFIMKGKLSNIIT----FGWNNKPYTDILKAGDFCG 545
           + L+PVL+T+ S+I++EGDP+D MLFIM+GKL  I T     G+ N  Y   L AGDFCG
Sbjct: 505 DRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLNSEY---LGAGDFCG 564

Query: 546 EELVQWAMDP-TSTSLPISARTVESLTEVEAFALKADELKFVTSQFHFQRLNSKQFQLRV 605
           EEL+ WA+DP +S++LPIS RTV +L EVEAFALKAD+LKFV SQ  F+RL+SKQ +   
Sbjct: 565 EELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKFVASQ--FRRLHSKQLRHTF 624

Query: 606 RFYSHQWKVWAAYKVQEAWHDYVERKKRGG---GDGRFQDALAK-IVGVSASFGATLYAS 665
           R+YS QWK WAA  +Q AW  Y+++K        + R QDALAK   G S S GAT+YAS
Sbjct: 625 RYYSQQWKTWAACFIQAAWRRYIKKKLEESLKEEENRLQDALAKEACGSSPSLGATIYAS 684

Query: 666 MFISYLLLAVQRDQHQKTAPLTR---VMTLPPPPKPDDKQDE 686
            F + +L  ++R    +   +      M L  P +PD   D+
Sbjct: 685 RFAANILRTIRRSGSVRKPRMPERMPPMLLQKPAEPDFNSDD 716

[Close]

BLAST of CmaCh00G002880 vs. TAIR 10
Match: AT4G01010.1 (cyclic nucleotide-gated channel 13 )

HSP 1 Score: 637.5 bits (1643), Expect = 1.3e-182
Identity = 345/704 (49.01%), Postives = 477/704 (67.76%), Query Frame = 0


Query: 15  VRFQPTSDFHDKYGGYQNRSRLSPSSMLECLHRGLTQ-IGF-----------KPEFWKKI 74
           VRF+       +YG  +N++R S +++L+ + RGL + + F                K I
Sbjct: 9   VRFRDWISEGTEYGYGRNKARPSLNTVLKNVRRGLKKPLSFGSHNKKRDSNSSTTTQKNI 68

Query: 75  LDPQKSFLQQWNKIFVLSSVIAVAVDPIFFYVPVFDKDRQCLTMDQDLMTITCVLRSFID 134
           ++PQ SFLQ WNKIF+ +SVIA+A+DP+FFY+P+ D +R CL + ++L     VLR+FID
Sbjct: 69  INPQGSFLQNWNKIFLFASVIALAIDPLFFYIPIVDGERHCLNLHRNLEIAASVLRTFID 128

Query: 135 LFYLLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLFSNFLIDILSILPLPQLLVL 194
            FY++H++F+FRT ++ PS  VFG GEL++DP AIA +YL S F+ID+LSILPLPQL+VL
Sbjct: 129 AFYIIHIVFQFRTAYISPSSRVFGRGELVDDPKAIAIKYLSSYFIIDLLSILPLPQLVVL 188

Query: 195 VIIPAAKDPIPTKTENIVKIAVLLQYIPRLLRIYPQYREVTKNSGILTETAWSGAAFNLL 254
            +IP    P+   T++ +   +  QYIPR+LRIYP Y EVT+ SGI+TETAW+GAA+NL 
Sbjct: 189 AVIPNVNKPVSLITKDYLITVIFTQYIPRILRIYPLYTEVTRTSGIVTETAWAGAAWNLS 248

Query: 255 IYLQACHVVGAIWYLLSIERQTKCWLVACMK--DDCRDNFLYCERRSEAMS---SSTIKF 314
           +Y+ A HV GA+WYL+S+ER+ +CW  AC K  + C   FLYC+  S   +   +++  F
Sbjct: 249 LYMLASHVFGALWYLISVEREDRCWREACEKIPEVCNFRFLYCDGNSSVRNDFLTTSCPF 308

Query: 315 CSPKKSDKTNTFDFGMYAKALEFDFTKT-SFSHKFFHSFWWALQNVSSSGQNLKVSNYMG 374
            +P     +  F+FG++  AL+    ++  F  KFF+ FWW L+N+S+ GQNL  S ++G
Sbjct: 309 INPDDITNSTVFNFGIFTDALKSGIVESDDFWKKFFYCFWWGLRNLSALGQNLNTSKFVG 368

Query: 375 EVLFAVFIAILGLVLFALLISNVQKYLQSTTVKIEQMRINRRDIEHWMAHRILPEDLRQR 434
           E++FAV I I GLVLFALLI N+QKYL+STTV+ E+MR+ +RD E WM+HR+LP+DLR+R
Sbjct: 369 EIIFAVSICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPDDLRKR 428

Query: 435 VRRYDQYKWQLNRGVKEEELITNLPKDLRKDIKRHLCLSLLKKVTLFSNMDKHLLDSMCE 494
           +RRY+QYKWQ  RGV+EE L+ NLPKDLR+DIKRH CL LLKKV LF  MD+ LLD++C+
Sbjct: 429 IRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVCD 488

Query: 495 YLKPVLFTKSSFILQEGDPIDTMLFIMKGKLSNIITFGWNNKPYTDI-LKAGDFCGEELV 554
            LKPVL+T++S+ ++EGDP++ MLF+M+GKL +  T G     +  + LK  DFCGE+L+
Sbjct: 489 KLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNAVYLKPSDFCGEDLL 548

Query: 555 QWAMDPTSTS-LPISARTVESLTEVEAFALKADELKFVTSQFHFQRLNSKQFQLRVRFYS 614
            WA+DP S+S  PIS RTV++LTEVEAFAL AD+LK V SQ  F+RL+SKQ Q   RFYS
Sbjct: 549 TWALDPQSSSHFPISTRTVQALTEVEAFALAADDLKLVASQ--FRRLHSKQLQHTFRFYS 608

Query: 615 HQWKVWAAYKVQEAWHDYVERKKRGG---GDGRFQDALAK---IVGVSASFGATLYASMF 674
            QW+ W A  +Q AW  +  RK        + RF++A+ K       S+S  ATLYAS F
Sbjct: 609 VQWRTWGASFIQAAWRRHCRRKLARSLTEEEDRFRNAITKRERNAASSSSLVATLYASRF 668

Query: 675 ISYLLLAVQRDQHQKTAPLTRVMTLPPPPKPDDKQDEPNFTILN 693
            S  L    R+      PL        PPKP     EP+F++ N
Sbjct: 669 ASNAL----RNLRTNNLPLL-------PPKP----SEPDFSLRN 695

[Close]

BLAST of CmaCh00G002880 vs. TAIR 10
Match: AT1G01340.1 (cyclic nucleotide gated channel 10 )

HSP 1 Score: 622.1 bits (1603), Expect = 5.4e-178
Identity = 325/648 (50.15%), Postives = 450/648 (69.44%), Query Frame = 0


Query: 60  KKILDPQKSFLQQWNKIFVLSSVIAVAVDPIFFYVPVFDKDRQCLTMDQDLMTITCVLRS 119
           K I++PQ SFLQ WNKIF+ + V+A+A+DP+FFY+P+ D  R CLT+D  L     +LR+
Sbjct: 61  KNIINPQDSFLQNWNKIFLFACVVALAIDPLFFYIPIVDSARHCLTLDSKLEIAASLLRT 120

Query: 120 FIDLFYLLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLFSNFLIDILSILPLPQL 179
            ID FY++H++F+FRT ++ PS  VFG GEL++D  AIA +YL S F+ID+LSILPLPQ+
Sbjct: 121 LIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYLSSYFIIDLLSILPLPQI 180

Query: 180 LVLVIIPAAKDPIPTKTENIVKIAVLLQYIPRLLRIYPQYREVTKNSGILTETAWSGAAF 239
           +VL +IP+   P+   T++ +K +++ QY+PR+LR+YP Y EVT+ SGI+TETAW+GAA+
Sbjct: 181 VVLAVIPSVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGAAW 240

Query: 240 NLLIYLQACHVVGAIWYLLSIERQTKCWLVACMK-DDCRDNFLYCERR---SEAMSSSTI 299
           NL +Y+ A HV GA+WYL+S+ER+ +CW  AC K   C   FLYCE     S    +++ 
Sbjct: 241 NLSLYMLASHVFGALWYLISVEREDRCWQEACEKTKGCNMKFLYCENDRNVSNNFLTTSC 300

Query: 300 KFCSPKKSDKTNTFDFGMYAKALEFDFTKT-SFSHKFFHSFWWALQNVSSSGQNLKVSNY 359
            F  P     +  F+FG++  AL+    ++  F  KFF+ FWW L+N+S+ GQNL+ S +
Sbjct: 301 PFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLRNLSALGQNLQTSKF 360

Query: 360 MGEVLFAVFIAILGLVLFALLISNVQKYLQSTTVKIEQMRINRRDIEHWMAHRILPEDLR 419
           +GE++FA+ I I GLVLFALLI N+QKYL+STTV+ E+MR+ +RD E WM+HR+LPEDLR
Sbjct: 361 VGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPEDLR 420

Query: 420 QRVRRYDQYKWQLNRGVKEEELITNLPKDLRKDIKRHLCLSLLKKVTLFSNMDKHLLDSM 479
           +R+RRY+QY+WQ  RGV+EE L+ NLPKDLR+DIKRHLCL LLKKV LF  MD+ LLD++
Sbjct: 421 KRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAV 480

Query: 480 CEYLKPVLFTKSSFILQEGDPIDTMLFIMKGKLSNIITFGWNNKPYTDI-LKAGDFCGEE 539
           C+ L+PVL+T++S++++EGDP+  MLF+M+G+L +  T G  +  +  + LKA DFCGE+
Sbjct: 481 CDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGED 540

Query: 540 LVQWAMDPTSTS-LPISARTVESLTEVEAFALKADELKFVTSQFHFQRLNSKQFQLRVRF 599
           L+ WA+DP S+S  PIS RTV++LTEVEAFAL A++LK V SQ  F+RL+SKQ Q   RF
Sbjct: 541 LLPWALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSVASQ--FRRLHSKQLQHTFRF 600

Query: 600 YSHQWKVWAAYKVQEAWHDYVER---KKRGGGDGRFQDALAK--------IVGVSASFGA 659
           YS QW+ W+   +Q AW  Y  R   K     + R ++ALA          V  S S G 
Sbjct: 601 YSVQWRTWSVSFIQAAWRRYCRRKLAKSLRDEEDRLREALASQDKEHNAATVSSSLSLGG 660

Query: 660 TLYASMFISYLLLAVQRDQHQKTAPLTRVMTLPPPPKPDDKQDEPNFT 690
            LYAS F S  L     +     + L    TLP  P+   K  EP+FT
Sbjct: 661 ALYASRFASNAL----HNLRHNISNLPPRYTLPLLPQ---KPTEPDFT 699

[Close]

BLAST of CmaCh00G002880 vs. TAIR 10
Match: AT1G01340.2 (cyclic nucleotide gated channel 10 )

HSP 1 Score: 622.1 bits (1603), Expect = 5.4e-178
Identity = 325/648 (50.15%), Postives = 450/648 (69.44%), Query Frame = 0


Query: 60  KKILDPQKSFLQQWNKIFVLSSVIAVAVDPIFFYVPVFDKDRQCLTMDQDLMTITCVLRS 119
           K I++PQ SFLQ WNKIF+ + V+A+A+DP+FFY+P+ D  R CLT+D  L     +LR+
Sbjct: 66  KNIINPQDSFLQNWNKIFLFACVVALAIDPLFFYIPIVDSARHCLTLDSKLEIAASLLRT 125

Query: 120 FIDLFYLLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLFSNFLIDILSILPLPQL 179
            ID FY++H++F+FRT ++ PS  VFG GEL++D  AIA +YL S F+ID+LSILPLPQ+
Sbjct: 126 LIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIALKYLSSYFIIDLLSILPLPQI 185

Query: 180 LVLVIIPAAKDPIPTKTENIVKIAVLLQYIPRLLRIYPQYREVTKNSGILTETAWSGAAF 239
           +VL +IP+   P+   T++ +K +++ QY+PR+LR+YP Y EVT+ SGI+TETAW+GAA+
Sbjct: 186 VVLAVIPSVNQPVSLLTKDYLKFSIIAQYVPRILRMYPLYTEVTRTSGIVTETAWAGAAW 245

Query: 240 NLLIYLQACHVVGAIWYLLSIERQTKCWLVACMK-DDCRDNFLYCERR---SEAMSSSTI 299
           NL +Y+ A HV GA+WYL+S+ER+ +CW  AC K   C   FLYCE     S    +++ 
Sbjct: 246 NLSLYMLASHVFGALWYLISVEREDRCWQEACEKTKGCNMKFLYCENDRNVSNNFLTTSC 305

Query: 300 KFCSPKKSDKTNTFDFGMYAKALEFDFTKT-SFSHKFFHSFWWALQNVSSSGQNLKVSNY 359
            F  P     +  F+FG++  AL+    ++  F  KFF+ FWW L+N+S+ GQNL+ S +
Sbjct: 306 PFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYCFWWGLRNLSALGQNLQTSKF 365

Query: 360 MGEVLFAVFIAILGLVLFALLISNVQKYLQSTTVKIEQMRINRRDIEHWMAHRILPEDLR 419
           +GE++FA+ I I GLVLFALLI N+QKYL+STTV+ E+MR+ +RD E WM+HR+LPEDLR
Sbjct: 366 VGEIIFAISICISGLVLFALLIGNMQKYLESTTVREEEMRVRKRDAEQWMSHRMLPEDLR 425

Query: 420 QRVRRYDQYKWQLNRGVKEEELITNLPKDLRKDIKRHLCLSLLKKVTLFSNMDKHLLDSM 479
           +R+RRY+QY+WQ  RGV+EE L+ NLPKDLR+DIKRHLCL LLKKV LF  MD+ LLD++
Sbjct: 426 KRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAV 485

Query: 480 CEYLKPVLFTKSSFILQEGDPIDTMLFIMKGKLSNIITFGWNNKPYTDI-LKAGDFCGEE 539
           C+ L+PVL+T++S++++EGDP+  MLF+M+G+L +  T G  +  +  + LKA DFCGE+
Sbjct: 486 CDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGED 545

Query: 540 LVQWAMDPTSTS-LPISARTVESLTEVEAFALKADELKFVTSQFHFQRLNSKQFQLRVRF 599
           L+ WA+DP S+S  PIS RTV++LTEVEAFAL A++LK V SQ  F+RL+SKQ Q   RF
Sbjct: 546 LLPWALDPQSSSHFPISTRTVQALTEVEAFALTAEDLKSVASQ--FRRLHSKQLQHTFRF 605

Query: 600 YSHQWKVWAAYKVQEAWHDYVER---KKRGGGDGRFQDALAK--------IVGVSASFGA 659
           YS QW+ W+   +Q AW  Y  R   K     + R ++ALA          V  S S G 
Sbjct: 606 YSVQWRTWSVSFIQAAWRRYCRRKLAKSLRDEEDRLREALASQDKEHNAATVSSSLSLGG 665

Query: 660 TLYASMFISYLLLAVQRDQHQKTAPLTRVMTLPPPPKPDDKQDEPNFT 690
            LYAS F S  L     +     + L    TLP  P+   K  EP+FT
Sbjct: 666 ALYASRFASNAL----HNLRHNISNLPPRYTLPLLPQ---KPTEPDFT 704

[Close]

BLAST of CmaCh00G002880 vs. TAIR 10
Match: AT2G46430.1 (cyclic nucleotide gated channel 3 )

HSP 1 Score: 600.9 bits (1548), Expect = 1.3e-171
Identity = 311/638 (48.75%), Postives = 437/638 (68.50%), Query Frame = 0


Query: 61  KILDPQKSFLQQWNKIFVLSSVIAVAVDPIFFYVPVFDKDRQCLTMDQDLMTITCVLRSF 120
           ++++P  S+LQ WNKIF+L SV+A+A DP+FFY+P    +R CL +D+ L TI CV R+F
Sbjct: 71  RVMNPNDSYLQSWNKIFLLLSVVALAFDPLFFYIPYVKPERFCLNLDKKLQTIACVFRTF 130

Query: 121 IDLFYLLHMIFEFRTGFLPPSLPVFGSGELIEDPAAIAKRYLFSNFLIDILSILPLPQLL 180
           ID FY++HM+F+F TGF+ PS   FG GEL E    IA RYL S FLID+LSILP+PQ++
Sbjct: 131 IDAFYVVHMLFQFHTGFITPSSSGFGRGELNEKHKDIALRYLGSYFLIDLLSILPIPQVV 190

Query: 181 VLVIIPAAKDPIPTKTENIVKIAVLLQYIPRLLRIYPQYREVTKNSGILTETAWSGAAFN 240
           VL I+P  + P     + ++K  +  QY+PR+ RIYP ++EVT+ SG++TETAW+GAA N
Sbjct: 191 VLAIVPRMRRPASLVAKELLKWVIFCQYVPRIARIYPLFKEVTRTSGLVTETAWAGAALN 250

Query: 241 LLIYLQACHVVGAIWYLLSIERQTKCWLVACMK-DDCRDNFLYCERRSE---AMSSSTIK 300
           L +Y+ A HV G+ WYL+SIER+ +CW  AC K  +C   +LYC    E      + +  
Sbjct: 251 LFLYMLASHVFGSFWYLISIERKDRCWREACAKIQNCTHAYLYCSPTGEDNRLFLNGSCP 310

Query: 301 FCSPKKSDKTNTFDFGMYAKALEFDFTKT-SFSHKFFHSFWWALQNVSSSGQNLKVSNYM 360
              P++   +  F+FG++A AL+    ++  F  KFF+ FWW L+N+S+ GQNLK S + 
Sbjct: 311 LIDPEEITNSTVFNFGIFADALQSGVVESRDFPKKFFYCFWWGLRNLSALGQNLKTSAFE 370

Query: 361 GEVLFAVFIAILGLVLFALLISNVQKYLQSTTVKIEQMRINRRDIEHWMAHRILPEDLRQ 420
           GE++FA+ I I GLVLFALLI N+QKYLQSTTV++E+MR+ RRD E WM+HR+LP+DLR+
Sbjct: 371 GEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMSHRMLPDDLRK 430

Query: 421 RVRRYDQYKWQLNRGVKEEELITNLPKDLRKDIKRHLCLSLLKKVTLFSNMDKHLLDSMC 480
           R+R+Y+QYKWQ  +GV+EE L+++LPKDLRKDIKRHLCL LLKKV  F  MD  LLD++C
Sbjct: 431 RIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCLKLLKKVPWFQAMDDRLLDALC 490

Query: 481 EYLKPVLFTKSSFILQEGDPIDTMLFIMKGKLSNIITFGWNNKPYTDI-LKAGDFCGEEL 540
             LK VL+T+ S+I++EG+P++ MLFIM+G L +  T+G     +  + L AGDFCG +L
Sbjct: 491 ARLKTVLYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLVAGDFCG-DL 550

Query: 541 VQWAMDPTSTSLPISARTVESLTEVEAFALKADELKFVTSQFHFQRLNSKQFQLRVRFYS 600
           + WA+DP S+  PIS+RTV++LTEVE F L AD+LKFV +Q  ++RL+SKQ +   RFYS
Sbjct: 551 LTWALDPLSSQFPISSRTVQALTEVEGFLLSADDLKFVATQ--YRRLHSKQLRHMFRFYS 610

Query: 601 HQWKVWAAYKVQEAWHDYVERKKRGG---GDGRFQDALAK--IVGVSASFGATLYASMFI 660
            QW+ WAA  +Q AW  +  RK        +G+  + L      G   + GA +YAS F 
Sbjct: 611 VQWQTWAACFIQAAWKRHCRRKLSKALREEEGKLHNTLQNDDSGGNKLNLGAAIYASRFA 670

Query: 661 SYLLLAVQRDQHQKTAPLTRVMTLPP--PPKPDDKQDE 686
           S+ L  ++ +   + +    ++TL P  P  P+   DE
Sbjct: 671 SHALRNLRANAAARNSRFPHMLTLLPQKPADPEFPMDE 705

The following BLAST results are available for this feature:

BLAST of CmaCh00G002880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65717	6.0e-190	51.57	Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 P...	[more]
Q9LD40	1.8e-181	49.01	Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LNJ0	7.7e-177	50.15	Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SKD7	1.8e-170	48.75	Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q8RWS9	6.3e-163	47.88	Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CmaCh00G002880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53130.1	4.3e-191	51.57	cyclic nucleotide gated channel 1	[more]
AT4G01010.1	1.3e-182	49.01	cyclic nucleotide-gated channel 13	[more]
AT1G01340.1	5.4e-178	50.15	cyclic nucleotide gated channel 10	[more]
AT1G01340.2	5.4e-178	50.15	cyclic nucleotide gated channel 10	[more]
AT2G46430.1	1.3e-171	48.75	cyclic nucleotide gated channel 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000595	Cyclic nucleotide-binding domain	SMART	SM00100	cnmp_10	coord: 462..591 e-value: 3.9E-6 score: 36.4
IPR000595	Cyclic nucleotide-binding domain	PFAM	PF00027	cNMP_binding	coord: 482..570 e-value: 1.7E-6 score: 28.0
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 462..546 score: 11.8636
IPR000595	Cyclic nucleotide-binding domain	CDD	cd00038	CAP_ED	coord: 462..593 e-value: 1.54741E-16 score: 73.8994
IPR005821	Ion transport domain	PFAM	PF00520	Ion_trans	coord: 72..388 e-value: 2.3E-30 score: 105.7
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 460..577 e-value: 4.8E-33 score: 115.6
None	No IPR available	GENE3D	1.10.287.630	Helix hairpin bin	coord: 388..453 e-value: 9.9E-18 score: 66.2
None	No IPR available	GENE3D	1.10.287.70		coord: 75..386 e-value: 3.6E-13 score: 51.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 669..693
None	No IPR available	PANTHER	PTHR45651	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	coord: 58..689
None	No IPR available	PANTHER	PTHR45651:SF5	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1	coord: 58..689
None	No IPR available	SUPERFAMILY	81324	Voltage-gated potassium channels	coord: 65..384
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 392..577

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G002880.1	CmaCh00G002880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
biological_process	GO:0006811	ion transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005216	ion channel activity