CmaCh00G002790 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G002790
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	zinc_ribbon_12 domain-containing protein
Location	Cma_Chr00: 22538249 .. 22538683 (+)
RNA-Seq Expression	CmaCh00G002790
Synteny	CmaCh00G002790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTAGACGAAACTCCTGCCAGTTTTCGTGTGCGCATCAACAGCACCCTCACCAATATCATTCTGGCCATTATGTCGATACCAGTTTGGATTCGTTCAATCACTACCCTCCTAATCCTCCCTTTCATCAGCCTTCTTGCTCTTGTTTCCAGTGCCAAAATAGATGCTCACAGGTTCCATCCTCACTACCTGGTAGTGCTTACTTCAATAGAAGGTTTCCTGATGTTCCAAACAATCCCTCACTATATTCTCATGAAAACATTGCTGCTTATGGGACATGTGTTAATAATATTAGAACCACTAATCCTCCCATAAATCTTCGTGATCGACAAGCACAATCACGATGGCCAACTGACTTCAATTCTGAGATTGGTGGAGTCCTTGGCAACCGTCCTCGGAGGACANTTGCCCATTTCAATGCATTGAAGTGCTAA

mRNA sequence

ATGCTTAGACGAAACTCCTGCCAGTTTTCGTGTGCGCATCAACAGCACCCTCACCAATATCATTCTGGCCATTATGTCGATACCAGTTTGGATTCGTTCAATCACTACCCTCCTAATCCTCCCTTTCATCAGCCTTCTTGCTCTTGTTTCCAGTGCCAAAATAGATGCTCACAGGTTCCATCCTCACTACCTGGTAGTGCTTACTTCAATAGAAGGTTTCCTGATGTTCCAAACAATCCCTCACTATATTCTCATGAAAACATTGCTGCTTATGGGACATGTGTTAATAATATTAGAACCACTAATCCTCCCATAAATCTTCGTGATCGACAAGCACAATCACGATGGCCAACTGACTTCAATTCTGAGATTGGTGGAGTCCTTGGCAACCGTCCTCGGAGGACANTTGCCCATTTCAATGCATTGAAGTGCTAA

Coding sequence (CDS)

ATGCTTAGACGAAACTCCTGCCAGTTTTCGTGTGCGCATCAACAGCACCCTCACCAATATCATTCTGGCCATTATGTCGATACCAGTTTGGATTCGTTCAATCACTACCCTCCTAATCCTCCCTTTCATCAGCCTTCTTGCTCTTGTTTCCAGTGCCAAAATAGATGCTCACAGGTTCCATCCTCACTACCTGGTAGTGCTTACTTCAATAGAAGGTTTCCTGATGTTCCAAACAATCCCTCACTATATTCTCATGAAAACATTGCTGCTTATGGGACATGTGTTAATAATATTAGAACCACTAATCCTCCCATAAATCTTCGTGATCGACAAGCACAATCACGATGGCCAACTGACTTCAATTCTGAGATTGGTGGAGTCCTTGGCAACCGTCCTCGGAGGACANTTGCCCATTTCAATGCATTGAAGTGCTAA

Protein sequence

MLRRNSCQFSCAHQQHPHQYHSGHYVDTSLDSFNHYPPNPPFHQPSCSCFQCQNRCSQVPSSLPGSAYFNRRFPDVPNNPSLYSHENIAAYGTCVNNIRTTNPPINLRDRQAQSRWPTDFNSEIGGVLGNRPRRTXAHFNALKC

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh00G002790 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh00G002790 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31105:SF37	EXTRA-LARGE G-LIKE PROTEIN	coord: 8..135
IPR040244	Protein enhanced disease resistance 4-like	PANTHER	PTHR31105	EXTRA-LARGE G-PROTEIN-LIKE	coord: 8..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G002790.1	CmaCh00G002790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900150	regulation of defense response to fungus