CmaCh00G002760 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGAAGAATTGGGCGTATGGGACTGTGGCAGTCCATTATACGACTCCTACGAGCTCGCCTCCCTCGCCCATATCATCGACCGCCATCTCATGGCGTTTCCGCCGCCTTCTTACGGCGGATCACGGCGGTTCTTCTCCAACAAAGTCTCCCACTTTTCTGCCATCATGCCATCTCCGCCGCTGTCCACCTCCACTTTGAAAAAGAAGCCGGTGGGCGAAATGAAGAACAAGCTCAAGAAATTCAAAATCACTGTGAGTCTTCCTGCAATTCTTTTTTGGAAAAAGAAGTAA ATGAGAGAAGAATTGGGCGTATGGGACTGTGGCAGTCCATTATACGACTCCTACGAGCTCGCCTCCCTCGCCCATATCATCGACCGCCATCTCATGGCGTTTCCGCCGCCTTCTTACGGCGGATCACGGCGGTTCTTCTCCAACAAAGTCTCCCACTTTTCTGCCATCATGCCATCTCCGCCGCTGTCCACCTCCACTTTGAAAAAGAAGCCGGTGGGCGAAATGAAGAACAAGCTCAAGAAATTCAAAATCACTGTGAGTCTTCCTGCAATTCTTTTTTGGAAAAAGAAGTAA ATGAGAGAAGAATTGGGCGTATGGGACTGTGGCAGTCCATTATACGACTCCTACGAGCTCGCCTCCCTCGCCCATATCATCGACCGCCATCTCATGGCGTTTCCGCCGCCTTCTTACGGCGGATCACGGCGGTTCTTCTCCAACAAAGTCTCCCACTTTTCTGCCATCATGCCATCTCCGCCGCTGTCCACCTCCACTTTGAAAAAGAAGCCGGTGGGCGAAATGAAGAACAAGCTCAAGAAATTCAAAATCACTGTGAGTCTTCCTGCAATTCTTTTTTGGAAAAAGAAGTAA MREELGVWDCGSPLYDSYELASLAHIIDRHLMAFPPPSYGGSRRFFSNKVSHFSAIMPSPPLSTSTLKKKPVGEMKNKLKKFKITVSLPAILFWKKK Homology
BLAST of CmaCh00G002760 vs. TAIR 10
Match: AT3G61660.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G46375.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 5.7e-09 Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 0
BLAST of CmaCh00G002760 vs. TAIR 10
Match: AT2G46375.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61660.1); Has 12 Blast hits to 12 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 9.2e-07 Identity = 20/30 (66.67%), Postives = 22/30 (73.33%), Query Frame = 0
BLAST of CmaCh00G002760 vs. TAIR 10
Match: AT5G41810.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 876 Blast hits to 690 proteins in 132 species: Archae - 0; Bacteria - 38; Metazoa - 180; Fungi - 112; Plants - 59; Viruses - 2; Other Eukaryotes - 485 (source: NCBI BLink). ) HSP 1 Score: 40.4 bits (93), Expect = 9.5e-04 Identity = 28/85 (32.94%), Postives = 42/85 (49.41%), Query Frame = 0
BLAST of CmaCh00G002760 vs. TAIR 10
Match: AT5G41810.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64340.1); Has 514 Blast hits to 437 proteins in 98 species: Archae - 0; Bacteria - 21; Metazoa - 115; Fungi - 53; Plants - 52; Viruses - 5; Other Eukaryotes - 268 (source: NCBI BLink). ) HSP 1 Score: 40.4 bits (93), Expect = 9.5e-04 Identity = 28/85 (32.94%), Postives = 42/85 (49.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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