CmaCh00G002700 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAAAGAATATTGTCGTTTTCTTTCTTTTCACGGTGGCTTTAGTGGGGGCTGAGGTTCCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAACGGGCTAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGACGATGACTTGGGGTATCATCGTTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAGGTTAACTTTTGGGGAACAACCCTCTATTGGTGCAAATTGGAGACGCCACATGCATATGTCTCTTTTGAAAGCTTTTGGCCTGAAACGCAGCACTTATGGCTCCGTGATAGGTGCAAACATGGAACTGTAGGAACTTGTATTTGGACGGCCAAAGATGATGGAATTTACTTGAGAAACTTTCTTGCTAATGTTGATGAATTGATACACAAGTGGATCTATAAAAGATAG ATGATAAAGAATATTGTCGTTTTCTTTCTTTTCACGGTGGCTTTAGTGGGGGCTGAGGTTCCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAACGGGCTAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGACGATGACTTGGGGTATCATCGTTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAGGTTAACTTTTGGGGAACAACCCTCTATTGGTGCAAATTGGAGACGCCACATGCATATGTCTCTTTTGAAAGCTTTTGGCCTGAAACGCAGCACTTATGGCTCCGTGATAGGTGCAAACATGGAACTGTAGGAACTTGTATTTGGACGGCCAAAGATGATGGAATTTACTTGAGAAACTTTCTTGCTAATGTTGATGAATTGATACACAAGTGGATCTATAAAAGATAG ATGATAAAGAATATTGTCGTTTTCTTTCTTTTCACGGTGGCTTTAGTGGGGGCTGAGGTTCCAAGGGTCGCGTTACCACCACCAGGACCTTCTAGATATTACATTCATGTGGTTAACGGGCTAAGCAAACTTGGGTTGCTTGTGCATTGTCAGTCTAAAGACGATGACTTGGGGTATCATCGTTTGCTTAATCATGGAGATGATTACCAATGGAACTTCAAGGTTAACTTTTGGGGAACAACCCTCTATTGGTGCAAATTGGAGACGCCACATGCATATGTCTCTTTTGAAAGCTTTTGGCCTGAAACGCAGCACTTATGGCTCCGTGATAGGTGCAAACATGGAACTGTAGGAACTTGTATTTGGACGGCCAAAGATGATGGAATTTACTTGAGAAACTTTCTTGCTAATGTTGATGAATTGATACACAAGTGGATCTATAAAAGATAG MIKNIVVFFLFTVALVGAEVPRVALPPPGPSRYYIHVVNGLSKLGLLVHCQSKDDDLGYHRLLNHGDDYQWNFKVNFWGTTLYWCKLETPHAYVSFESFWPETQHLWLRDRCKHGTVGTCIWTAKDDGIYLRNFLANVDELIHKWIYKR Homology
BLAST of CmaCh00G002700 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.1e-15 Identity = 52/152 (34.21%), Postives = 76/152 (50.00%), Query Frame = 0
BLAST of CmaCh00G002700 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.0e-14 Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of CmaCh00G002700 vs. ExPASy Swiss-Prot
Match: F2Q9V4 (S-protein homolog 6 OS=Arabidopsis thaliana OX=3702 GN=SPH6 PE=3 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 4.9e-12 Identity = 45/145 (31.03%), Postives = 69/145 (47.59%), Query Frame = 0
BLAST of CmaCh00G002700 vs. ExPASy Swiss-Prot
Match: Q9LW22 (S-protein homolog 21 OS=Arabidopsis thaliana OX=3702 GN=SPH21 PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.6e-09 Identity = 33/94 (35.11%), Postives = 50/94 (53.19%), Query Frame = 0
BLAST of CmaCh00G002700 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08 Identity = 35/116 (30.17%), Postives = 61/116 (52.59%), Query Frame = 0
BLAST of CmaCh00G002700 vs. TAIR 10
Match: AT4G16295.1 (S-protein homologue 1 ) HSP 1 Score: 82.0 bits (201), Expect = 4.4e-16 Identity = 52/152 (34.21%), Postives = 76/152 (50.00%), Query Frame = 0
BLAST of CmaCh00G002700 vs. TAIR 10
Match: AT4G29035.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 81.3 bits (199), Expect = 7.4e-16 Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = 0
BLAST of CmaCh00G002700 vs. TAIR 10
Match: AT3G26880.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 62.0 bits (149), Expect = 4.7e-10 Identity = 33/94 (35.11%), Postives = 50/94 (53.19%), Query Frame = 0
BLAST of CmaCh00G002700 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 61.6 bits (148), Expect = 6.1e-10 Identity = 35/95 (36.84%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of CmaCh00G002700 vs. TAIR 10
Match: AT5G06020.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 60.5 bits (145), Expect = 1.4e-09 Identity = 32/99 (32.32%), Postives = 46/99 (46.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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