CmaCh00G002340 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G002340
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ATP synthase epsilon chain, chloroplastic
Location	Cma_Chr00: 16737562 .. 16739033 (-)
RNA-Seq Expression	CmaCh00G002340
Synteny	CmaCh00G002340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCTGTATTACCGCGACTGCTGGCACAAAGTTAGCCGATGCTTATTCCCCAGATACCGTCATTGCTTCTTCTCCGGGAAAAGAAGTTCACAACCTGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGAGGAAAATTCCCCACTGCTACCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCGTCCTCTTGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCTCCTCGGGCGGATTCCTCTTTTTCTCCTCAGCGAACGGGATATTAGCAACCGTTTCCAGCTGTTGTTCCCCTCCTAAGGGCAGGTTCTTACGCGTTACTCACCTGTCCGTCACTGGAAACACCACTTCCCATCCGACTTGCATGTGTTAAGCTAATTCGGAATTGTCTTTCATTCCAAGGCATAACTTGTATCCATGCGCTTCATATTCGCCTAGAGTTCGCTCCCAGAAGTATAGCCATCCCCACCCCCTCACGTCAATCCCACAAGCCTATTATCCATTCTCATTCGATCACGGCGGGGGAGCAAGTAAAAATAGAAAAACTCACATTGGGTTTAGGGATAATCAGGCTCGTACCGATGACTTCCGCCACGTCAAGGCGACACTCTATCACTGAGTTATATCCCTTCCCTTGCCCCCATCGAGAAATAGAACTGACTAATCCTAAGGCAAAGGGGCGAGAAACTCAACGCCACTATTCTTGAACAACTTGGAATTGGGTCTTCCTTCTTTTCGCACTATTACGGATACAAAAATGAAAATAATAGGCAAAATTGGATTCAATTGTCAACTGCTTCTATCGTAAATAGGATTGACTACGGATTCGAGCCATAGCACATGGTTTCATAAAACCGTACGATTTTCCCGATCTAAATAAAGCAGGTTTTACATGAAGAAGATTTGGCTCAGCATGTTCTATTCGATACGGGTAGGAAAAGAACCCAACTCGGTATTATTAAAAAAATAGAGAAATCAGAACCCAGTCAAGATGATACGGATCAACCCCTTCTTCTTGTGCCAAAGATCTTACCATTTCTGAAGAAACTGAAAGAAATGATTTTAGTTACGAATAGTGGACAAGTTAGTGTATTACCAAATCACGACCTATTGCCACAGGTGTAGATATAGGTATTTTGAGAATACGCCTTACGGATAATGAGGGATGGTTAACGATGGCTCTGATGGGTGGTTTTGCTAGAATAGGCAATAATGAGGTCCCTATTTTAGTAAATGATGGGGAGAAGGCTAGTGACATTGATCCACAAGAAGCTCAGCAAACTCTTGAAATAGCAGAAGCTAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTTAGCTCTCAGACGAGCTAGGACACGAGTAGAGGCTATCAATGGCATACCTAGTTGA

mRNA sequence

ATGCTCTGTATTACCGCGACTGCTGGCACAAAGTTAGCCGATGCTTATTCCCCAGATACCGTCATTGCTTCTTCTCCGGGAAAAGAAGTTCACAACCTAATAGGCAATAATGAGGTCCCTATTTTAGTAAATGATGGGGAGAAGGCTAGTGACATTGATCCACAAGAAGCTCAGCAAACTCTTGAAATAGCAGAAGCTAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTTAGCTCTCAGACGAGCTAGGACACGAGTAGAGGCTATCAATGGCATACCTAGTTGA

Coding sequence (CDS)

ATGCTCTGTATTACCGCGACTGCTGGCACAAAGTTAGCCGATGCTTATTCCCCAGATACCGTCATTGCTTCTTCTCCGGGAAAAGAAGTTCACAACCTAATAGGCAATAATGAGGTCCCTATTTTAGTAAATGATGGGGAGAAGGCTAGTGACATTGATCCACAAGAAGCTCAGCAAACTCTTGAAATAGCAGAAGCTAACTTGAGGAAAGCTCAGGGCAAGAGACAAACAATCGAGGCAAATTTAGCTCTCAGACGAGCTAGGACACGAGTAGAGGCTATCAATGGCATACCTAGTTGA

Protein sequence

MLCITATAGTKLADAYSPDTVIASSPGKEVHNLIGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEAINGIPS

Homology

[Close]

BLAST of CmaCh00G002340 vs. ExPASy Swiss-Prot
Match: Q4VZG9 (ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus OX=3659 GN=atpE PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 3.9e-26
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA
Sbjct: 71  IGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 130

Query: 94  INGIPS 100
           ING+PS
Sbjct: 131 INGVPS 136

[Close]

BLAST of CmaCh00G002340 vs. ExPASy Swiss-Prot
Match: Q70XZ7 (ATP synthase epsilon chain, chloroplastic OS=Amborella trichopoda OX=13333 GN=atpE PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 57/66 (86.36%), Postives = 60/66 (90.91%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNE+ ILVND EK SDIDPQEAQQTLEIAEANL +A+GKRQTIEANLALRRARTRVEA
Sbjct: 69  IGNNEITILVNDAEKGSDIDPQEAQQTLEIAEANLSRAEGKRQTIEANLALRRARTRVEA 128

Query: 94  INGIPS 100
           IN I S
Sbjct: 129 INAISS 134

[Close]

BLAST of CmaCh00G002340 vs. ExPASy Swiss-Prot
Match: Q49KZ2 (ATP synthase epsilon chain, chloroplastic OS=Eucalyptus globulus subsp. globulus OX=71271 GN=atpE PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 56/64 (87.50%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNE+ ILVND EK SDIDPQEAQ+TLE+AEANLRKA+GKRQTIEANLALRRARTRVEA
Sbjct: 69  IGNNEITILVNDAEKGSDIDPQEAQETLELAEANLRKAEGKRQTIEANLALRRARTRVEA 128

Query: 94  INGI 98
           IN I
Sbjct: 129 INAI 132

[Close]

BLAST of CmaCh00G002340 vs. ExPASy Swiss-Prot
Match: A0ZZ41 (ATP synthase epsilon chain, chloroplastic OS=Gossypium barbadense OX=3634 GN=atpE PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNE+ ILVND EK SDIDPQEAQQ LEIAEANLRKA+GKRQTIEANLALRRARTRVEA
Sbjct: 69  IGNNEITILVNDAEKGSDIDPQEAQQALEIAEANLRKAEGKRQTIEANLALRRARTRVEA 128

Query: 94  INGI 98
           IN I
Sbjct: 129 INAI 132

[Close]

BLAST of CmaCh00G002340 vs. ExPASy Swiss-Prot
Match: Q2L911 (ATP synthase epsilon chain, chloroplastic OS=Gossypium hirsutum OX=3635 GN=atpE PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22
Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNE+ ILVND EK SDIDPQEAQQ LEIAEANLRKA+GKRQTIEANLALRRARTRVEA
Sbjct: 69  IGNNEITILVNDAEKGSDIDPQEAQQALEIAEANLRKAEGKRQTIEANLALRRARTRVEA 128

Query: 94  INGI 98
           IN I
Sbjct: 129 INAI 132

[Close]

BLAST of CmaCh00G002340 vs. ExPASy TrEMBL
Match: A0A218KG49 (ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=atpE PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.5e-23
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA
Sbjct: 71  IGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 130

Query: 94  INGIPS 100
           ING+PS
Sbjct: 131 INGVPS 136

[Close]

BLAST of CmaCh00G002340 vs. ExPASy TrEMBL
Match: G3ETZ1 (ATP synthase epsilon chain, chloroplastic OS=Cucumis melo subsp. melo OX=412675 GN=atpE PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.5e-23
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA
Sbjct: 71  IGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 130

Query: 94  INGIPS 100
           ING+PS
Sbjct: 131 INGVPS 136

[Close]

BLAST of CmaCh00G002340 vs. ExPASy TrEMBL
Match: A0A1X9Q1L0 (ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus OX=3659 GN=atpE PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.5e-23
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA
Sbjct: 71  IGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 130

Query: 94  INGIPS 100
           ING+PS
Sbjct: 131 INGVPS 136

[Close]

BLAST of CmaCh00G002340 vs. ExPASy TrEMBL
Match: A0A249RZA2 (ATP synthase epsilon chain, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=atpE PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.5e-23
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA
Sbjct: 71  IGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 130

Query: 94  INGIPS 100
           ING+PS
Sbjct: 131 INGVPS 136

[Close]

BLAST of CmaCh00G002340 vs. ExPASy TrEMBL
Match: A0A1S4EU14 (ATP synthase epsilon chain, chloroplastic OS=Cucumis melo OX=3656 GN=atpE PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.5e-23
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA
Sbjct: 71  IGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 130

Query: 94  INGIPS 100
           ING+PS
Sbjct: 131 INGVPS 136

[Close]

BLAST of CmaCh00G002340 vs. NCBI nr
Match: YP_009752081.1 (CF1 subunit epsilon [Dendrosicyos socotranus] >YP_009753095.1 CF1 subunit epsilon [Corallocarpus boehmii] >QIT05491.1 CF1 subunit epsilon [Dendrosicyos socotranus] >QIT06167.1 CF1 subunit epsilon [Corallocarpus boehmii])

HSP 1 Score: 118.6 bits (296), Expect = 3.0e-23
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA
Sbjct: 71  IGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 130

Query: 94  INGIPS 100
           ING+PS
Sbjct: 131 INGVPS 136

[Close]

BLAST of CmaCh00G002340 vs. NCBI nr
Match: YP_009751996.1 (CF1 subunit epsilon [Cionosicys macranthus] >QIT05237.1 CF1 subunit epsilon [Cionosicys macranthus])

HSP 1 Score: 118.6 bits (296), Expect = 3.0e-23
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA
Sbjct: 71  IGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 130

Query: 94  INGIPS 100
           ING+PS
Sbjct: 131 INGVPS 136

[Close]

BLAST of CmaCh00G002340 vs. NCBI nr
Match: ASY96329.1 (ATP synthase CF1 epsilon subunit [Cucumis melo subsp. agrestis])

HSP 1 Score: 118.6 bits (296), Expect = 3.0e-23
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA
Sbjct: 71  IGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 130

Query: 94  INGIPS 100
           ING+PS
Sbjct: 131 INGVPS 136

[Close]

BLAST of CmaCh00G002340 vs. NCBI nr
Match: ALO22128.1 (AtpE [Cucurbita ficifolia] >QWV60846.1 ATP synthase CF1 epsilon subunit [Cucurbita ficifolia] >QZL38791.1 ATP synthase CF1 epsilon subunit [Cucurbita ficifolia])

HSP 1 Score: 118.6 bits (296), Expect = 3.0e-23
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA
Sbjct: 73  IGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 132

Query: 94  INGIPS 100
           ING+PS
Sbjct: 133 INGVPS 138

[Close]

BLAST of CmaCh00G002340 vs. NCBI nr
Match: YP_004841789.1 (ATP synthase CF1 epsilon subunit [Cucumis melo subsp. melo] >YP_009004050.1 ATP synthase CF1 epsilon subunit [Cucumis hystrix] >YP_009317392.1 ATP synthase CF1 epsilon subunit [Coccinia grandis] >YP_009325995.1 ATP synthase CF1 epsilon subunit [Citrullus lanatus] >YP_009348037.1 ATP synthase CF1 epsilon subunit [Citrullus mucosospermus] >YP_009420800.1 ATP synthase CF1 epsilon subunit [Citrullus colocynthis] >YP_009431563.1 ATP synthase CF1 epsilon subunit [Citrullus amarus] >YP_009431648.1 ATP synthase CF1 epsilon subunit [Citrullus rehmii] >YP_009456152.1 ATP synthase CF1 epsilon subunit [Lagenaria siceraria] >YP_009860079.1 ATP synthase CF1 epsilon subunit [Cucumis melo subsp. agrestis] >YP_247605.1 ATP synthase CF1 epsilon subunit [Cucumis sativus] >Q4VZG9.1 RecName: Full=ATP synthase epsilon chain, chloroplastic; AltName: Full=ATP synthase F1 sector epsilon subunit; AltName: Full=F-ATPase epsilon subunit [Cucumis sativus] >ALF03307.1 ATP synthase CF1 epsilon subunit [Cucumis sativus var. hardwickii] >APW82467.1 ATP synthase CF1 epsilon subunit [Citrullus lanatus subsp. vulgaris] >ASY96590.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. conomon] >ASY96677.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. makuwa] >ASY96764.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. momordica] >ASY96851.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. dudaim] >ASY96938.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. cantalupo] >ASY97112.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. inodorus] >ASY97286.1 ATP synthase CF1 epsilon subunit [Cucumis melo var. flexuosus] >AVE15337.1 AtpE [Cucumis sativus var. sativus] >QJF46389.1 ATP synthase CF1 epsilon subunit [Cucumis melo] >QNM38537.1 ATP synthase CF1 epsilon subunit [Lagenaria siceraria var. microcarpa] >QZL38599.1 CF1 subunit epsilon [Citrullus naudinianus] >QZL38687.1 CF1 subunit epsilon [Citrullus ecirrhosus])

HSP 1 Score: 118.6 bits (296), Expect = 3.0e-23
Identity = 63/66 (95.45%), Postives = 64/66 (96.97%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNEV ILVND EKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA
Sbjct: 71  IGNNEVTILVNDAEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 130

Query: 94  INGIPS 100
           ING+PS
Sbjct: 131 INGVPS 136

[Close]

BLAST of CmaCh00G002340 vs. TAIR 10
Match: ATCG00470.1 (ATP synthase epsilon chain )

HSP 1 Score: 106.7 bits (265), Expect = 1.1e-23
Identity = 57/64 (89.06%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 34  IGNNEVPILVNDGEKASDIDPQEAQQTLEIAEANLRKAQGKRQTIEANLALRRARTRVEA 93
           IGNNE+ ILVND EK SDIDPQEAQQTLEIAEANLRKA+GKRQTIEANLALRRARTRVEA
Sbjct: 69  IGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALRRARTRVEA 128

Query: 94  INGI 98
           +N I
Sbjct: 129 LNTI 132

The following BLAST results are available for this feature:

BLAST of CmaCh00G002340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZG9	3.9e-26	95.45	ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus OX=3659 GN=atpE PE=...	[more]
Q70XZ7	1.2e-22	86.36	ATP synthase epsilon chain, chloroplastic OS=Amborella trichopoda OX=13333 GN=at...	[more]
Q49KZ2	1.2e-22	87.50	ATP synthase epsilon chain, chloroplastic OS=Eucalyptus globulus subsp. globulus...	[more]
A0ZZ41	1.2e-22	89.06	ATP synthase epsilon chain, chloroplastic OS=Gossypium barbadense OX=3634 GN=atp...	[more]
Q2L911	1.2e-22	89.06	ATP synthase epsilon chain, chloroplastic OS=Gossypium hirsutum OX=3635 GN=atpE ...	[more]

BLAST of CmaCh00G002340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KG49	1.5e-23	95.45	ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus var. hardwickii OX=...	[more]
G3ETZ1	1.5e-23	95.45	ATP synthase epsilon chain, chloroplastic OS=Cucumis melo subsp. melo OX=412675 ...	[more]
A0A1X9Q1L0	1.5e-23	95.45	ATP synthase epsilon chain, chloroplastic OS=Cucumis sativus OX=3659 GN=atpE PE=...	[more]
A0A249RZA2	1.5e-23	95.45	ATP synthase epsilon chain, chloroplastic OS=Cucumis melo var. cantalupensis OX=...	[more]
A0A1S4EU14	1.5e-23	95.45	ATP synthase epsilon chain, chloroplastic OS=Cucumis melo OX=3656 GN=atpE PE=3 S...	[more]

BLAST of CmaCh00G002340 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009752081.1	3.0e-23	95.45	CF1 subunit epsilon [Dendrosicyos socotranus] >YP_009753095.1 CF1 subunit epsilo...	[more]
YP_009751996.1	3.0e-23	95.45	CF1 subunit epsilon [Cionosicys macranthus] >QIT05237.1 CF1 subunit epsilon [Cio...	[more]
ASY96329.1	3.0e-23	95.45	ATP synthase CF1 epsilon subunit [Cucumis melo subsp. agrestis]	[more]
ALO22128.1	3.0e-23	95.45	AtpE [Cucurbita ficifolia] >QWV60846.1 ATP synthase CF1 epsilon subunit [Cucurbi...	[more]
YP_004841789.1	3.0e-23	95.45	ATP synthase CF1 epsilon subunit [Cucumis melo subsp. melo] >YP_009004050.1 ATP ...	[more]

BLAST of CmaCh00G002340 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00470.1	1.1e-23	89.06	ATP synthase epsilon chain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 61..81
None	No IPR available	GENE3D	6.10.140.480		coord: 54..99 e-value: 6.8E-26 score: 91.5
None	No IPR available	PANTHER	PTHR13822:SF10	ATP SYNTHASE EPSILON CHAIN, CHLOROPLASTIC	coord: 33..95
IPR020547	ATP synthase delta/epsilon subunit, C-terminal domain	PFAM	PF00401	ATP-synt_DE	coord: 51..94 e-value: 1.2E-7 score: 31.9
IPR001469	ATP synthase, F1 complex, delta/epsilon subunit	PANTHER	PTHR13822	ATP SYNTHASE DELTA/EPSILON CHAIN	coord: 33..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G002340.1	CmaCh00G002340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism