CmaCh00G002330 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTCTACTTTATGAATATGATATTTTCTGGGTATTTCTAATAATATCAAGTGTTATTCTGATTTTGTCATTTCTTATTTCTGGAGTTTTAGCCCCTCTTAGCAAAGAGCCAGAGAAACTTTTTAGTTATGAATCGGGAATAGAACCAACGGGCGATGCTTGGGTACAATTTCAAATTCGTTATTATATATTTGCTAATGTTTTTGTTACGAATAGTGGACAAATTGATGTATTACAAATCTTAATTGTATTTACATTTCATTTTAATATTGATATCCATTTCTAGAAATATTATTTACTTTGTTTAATATATTTATATTTAGTATTTTCTAAAAATTATATATTCTATTTAATAAATGAAAAGAATGAAATTATTTCATGTTTAAATTTTAACATTTTCAAGTTATAAAATTTATTTATACTGTACTTGTTTTCTTTTATACTTGGTCTTGAAGTAGAAAACGTTCCATCTATTCCTGAATAGCTTCTTTCAAAAGGGCTTCCGCTTCAGGGGTAAATGTCTTGGTGGAAGATATTATTTCTTGAAACTGAGGTTTATTCGTTTTTACGTAAGTACGTAACTCAACGAGAAATTTTCTTACTTGTTCAATTTCTAATGAATCAAGATAACCATTCGTTCCGGTATAAATAGTCATTAACTTTTCTTCTACCGTGAGAGGGGTTGATTGGGATTGTTTCACGTAATCGTTGACCTCTTGCCAATTGATTTTGAGTAGCTTTATCGAGATCAGAAACGAATTGCGCAAAGGCTTCTAATTCGACAAATTGAGCCAATTCCCATTTTGATTTTCCGGCTATTTGTTTAATGGCTTTAATTTGAGCTGCAGATCCTACTCTGGAGACGGAAATACCCACATTAATAGCAGGTCTGATTCCAGCATTGAATAGATACCCAGATAAGAATATTTGTCCATCAGTAATGGAAATTACATTAGTAGGAATATAAGCTGAAACATCTCCCGATTGGGTCTCAACTATTGGTAAAGCAGTCATACTTCCTTCACCTAAAGCAGAACTTGATTTAGCGGCTCTTTCCAAAAGGCGTGAATTCAAATAAAAAACATCTCCCGGATAAGATTCGCGGCCGAGCGGTCTTCGTAAAAGAAGAGACATTTGTCGATAAGCTTGTGCTTGTTTGGAGGGATCATCATAAATGATTAAAGTGTGTTGTTTTCTGTACATAAAATATTCAGCCAAAGCTGCTCCTGTATAAGGAGCAAGGTATTGTAATGTAGCTGGAGAATCAGCCATTTAGCCTACTATAATAGTGTATTCCATTGCCCCCCTTTCCTGTAAAGTAGTAACTACTTAGCCAGTAACTATTTAGCCACAGAAGAGGCTTTTTGACCAATAGCTACATAAACACATATTACATTTTGCCCTTGTTGATTTAGAATCATATCCGTGGCTACTGCAGTTTTACGGTTCTGCCTGTCCCCAATAATTAA ATGTTTCTACTTTATGAATATGATATTTTCTGGGTATTTCTAATAATATCAAGTGTTATTCTGATTTTGTCATTTCTTATTTCTGGAGTTTTAGCCCCTCTTAGCAAAGAGCCAGAGAAACTTTTTAGTTATGAATCGGGAATAGAACCAACGGGCGATGCTTGGGTACAATTTCAAATTCGTTATTATATATTTGCTAATGTTTTTGTTACGAATAGTGGACAAATTGATAAAACGTTCCATCTATTCCTGAATAGCTTCTTTCAAAAGGGCTTCCGCTTCAGGGGTAAATGTCTTGGTGGAAGATATTATTTCTTGAAACTGAGGTTTATTCGTTTTTACAATCATATCCGTGGCTACTGCAGTTTTACGGTTCTGCCTGTCCCCAATAATTAA ATGTTTCTACTTTATGAATATGATATTTTCTGGGTATTTCTAATAATATCAAGTGTTATTCTGATTTTGTCATTTCTTATTTCTGGAGTTTTAGCCCCTCTTAGCAAAGAGCCAGAGAAACTTTTTAGTTATGAATCGGGAATAGAACCAACGGGCGATGCTTGGGTACAATTTCAAATTCGTTATTATATATTTGCTAATGTTTTTGTTACGAATAGTGGACAAATTGATAAAACGTTCCATCTATTCCTGAATAGCTTCTTTCAAAAGGGCTTCCGCTTCAGGGGTAAATGTCTTGGTGGAAGATATTATTTCTTGAAACTGAGGTTTATTCGTTTTTACAATCATATCCGTGGCTACTGCAGTTTTACGGTTCTGCCTGTCCCCAATAATTAA MFLLYEYDIFWVFLIISSVILILSFLISGVLAPLSKEPEKLFSYESGIEPTGDAWVQFQIRYYIFANVFVTNSGQIDKTFHLFLNSFFQKGFRFRGKCLGGRYYFLKLRFIRFYNHIRGYCSFTVLPVPNN Homology
BLAST of CmaCh00G002330 vs. ExPASy Swiss-Prot
Match: Q4VZH0 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhC PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.2e-26 Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CmaCh00G002330 vs. ExPASy Swiss-Prot
Match: A9L9A1 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Lemna minor OX=4472 GN=ndhC PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 6.4e-24 Identity = 58/70 (82.86%), Postives = 64/70 (91.43%), Query Frame = 0
BLAST of CmaCh00G002330 vs. ExPASy Swiss-Prot
Match: Q06FV5 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Pelargonium hortorum OX=4031 GN=ndhC PE=3 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 6.4e-24 Identity = 58/70 (82.86%), Postives = 65/70 (92.86%), Query Frame = 0
BLAST of CmaCh00G002330 vs. ExPASy Swiss-Prot
Match: P52765 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Lupinus luteus OX=3873 GN=ndhC PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-23 Identity = 57/70 (81.43%), Postives = 64/70 (91.43%), Query Frame = 0
BLAST of CmaCh00G002330 vs. ExPASy Swiss-Prot
Match: Q0ZJ15 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhC PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-23 Identity = 58/70 (82.86%), Postives = 63/70 (90.00%), Query Frame = 0
BLAST of CmaCh00G002330 vs. ExPASy TrEMBL
Match: A0A0S2IFJ0 (NADH-quinone oxidoreductase subunit A OS=Cucurbita moschata OX=3662 GN=ndhC PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 8.6e-24 Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CmaCh00G002330 vs. ExPASy TrEMBL
Match: A0A0S2IED4 (NADH-quinone oxidoreductase subunit A OS=Cucurbita argyrosperma OX=34294 GN=ndhC PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 8.6e-24 Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CmaCh00G002330 vs. ExPASy TrEMBL
Match: A0A2H4T1Y6 (NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=ndhC PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 8.6e-24 Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CmaCh00G002330 vs. ExPASy TrEMBL
Match: A0A0S2IGY5 (NADH-quinone oxidoreductase subunit A OS=Cucurbita pepo var. texana OX=37651 GN=ndhC PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 8.6e-24 Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CmaCh00G002330 vs. ExPASy TrEMBL
Match: A0A0S2IH51 (NADH-quinone oxidoreductase subunit A OS=Cucurbita pepo subsp. fraterna OX=37649 GN=ndhC PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 8.6e-24 Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CmaCh00G002330 vs. NCBI nr
Match: ALO22164.1 (NdhC [Cucurbita foetidissima] >ALO22875.1 NdhC [Cucurbita pedatifolia]) HSP 1 Score: 119.8 bits (299), Expect = 1.8e-23 Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CmaCh00G002330 vs. NCBI nr
Match: YP_009560840.1 (NdhC [Trichosanthes kirilowii] >QAB33195.1 NdhC [Trichosanthes kirilowii]) HSP 1 Score: 119.8 bits (299), Expect = 1.8e-23 Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CmaCh00G002330 vs. NCBI nr
Match: YP_009447455.1 (NADH dehydrogenase subunit 3 [Cucurbita maxima] >YP_009447540.1 NADH dehydrogenase subunit 3 [Cucurbita moschata] >YP_009505085.1 NADH dehydrogenase subunit 3 [Cucurbita pepo] >ALO21719.1 NdhC [Cucurbita argyrosperma] >ALO21821.1 NdhC [Cucurbita argyrosperma var. palmeri] >ALO21844.1 NdhC [Cucurbita argyrosperma subsp. sororia] >ALO21931.1 NdhC [Cucurbita cordata] >ALO21996.1 NdhC [Cucurbita digitata] >ALO22029.1 NdhC [Cucurbita ecuadorensis] >ALO22102.1 NdhC [Cucurbita ficifolia] >ALO22216.1 NdhC [Cucurbita lundelliana] >ALO22339.1 NdhC [Cucurbita maxima subsp. andreana] >ALO22410.1 NdhC [Cucurbita okeechobeensis] >ALO22514.1 NdhC [Cucurbita okeechobeensis subsp. martinezii] >ALO22541.1 NdhC [Cucurbita pepo subsp. fraterna] >ALO22639.1 NdhC [Cucurbita pepo subsp. ovifera] >ALO22725.1 NdhC [Cucurbita pepo var. ozarkana] >ALO22763.1 NdhC [Cucurbita pepo subsp. pepo] >ALO22843.1 NdhC [Cucurbita pepo var. texana]) HSP 1 Score: 119.8 bits (299), Expect = 1.8e-23 Identity = 64/70 (91.43%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CmaCh00G002330 vs. NCBI nr
Match: YP_009751743.1 (NADH dehydrogenase subunit C [Herpetospermum pedunculosum] >QIT04476.1 NADH dehydrogenase subunit C [Herpetospermum pedunculosum] >QJR52961.1 NADH-plastoquinone oxidoreductase subunit 3 [Herpetospermum pedunculosum]) HSP 1 Score: 118.6 bits (296), Expect = 4.0e-23 Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CmaCh00G002330 vs. NCBI nr
Match: YP_009004049.1 (NADH-plastoquinone oxidoreductase subunit 3 [Cucumis hystrix] >YP_009317391.1 NADH dehydrogenase subunit 3 [Coccinia grandis] >YP_009325994.1 NADH dehydrogenase subunit 3 [Citrullus lanatus] >YP_009346489.1 NADH-plastoquinone oxidoreductase subunit 3 [Cucumis x hytivus] >YP_009348036.1 NADH dehydrogenase subunit 3 [Citrullus mucosospermus] >YP_009420799.1 NADH dehydrogenase subunit 3 [Citrullus colocynthis] >YP_009431562.1 NADH dehydrogenase subunit 3 [Citrullus amarus] >YP_009431647.1 NADH dehydrogenase subunit 3 [Citrullus rehmii] >YP_009456066.1 NADH dehydrogenase subunit 3 [Momordica charantia] >YP_009456151.1 NADH dehydrogenase subunit 3 [Lagenaria siceraria] >YP_009751911.1 NADH dehydrogenase subunit C [Cyclanthera pedata] >YP_009751995.1 NADH dehydrogenase subunit C [Cionosicys macranthus] >YP_009752080.1 NADH dehydrogenase subunit C [Dendrosicyos socotranus] >YP_009752248.1 NADH dehydrogenase subunit C [Trichosanthes baviensis] >YP_009752332.1 NADH dehydrogenase subunit C [Bryonia marmorata] >YP_009752417.1 NADH dehydrogenase subunit C [Trichosanthes tricuspidata] >YP_009752501.1 NADH dehydrogenase subunit C [Trichosanthes tubiflora] >YP_009752586.1 NADH dehydrogenase subunit C [Trichosanthes homophylla] >YP_009753094.1 NADH dehydrogenase subunit C [Corallocarpus boehmii] >YP_009753179.1 NADH dehydrogenase subunit C [Trichosanthes truncata] >YP_009753263.1 NADH dehydrogenase subunit C [Nothoalsomitra suberosa] >YP_009753625.1 NADH dehydrogenase subunit C [Trichosanthes wallichiana] >YP_009753710.1 NADH dehydrogenase subunit C [Trichosanthes nervifolia] >YP_009753794.1 NADH dehydrogenase subunit C [Trichosanthes pilosa] >YP_009753879.1 NADH dehydrogenase subunit C [Trichosanthes lobata] >YP_009945422.1 NADH-plastoquinone oxidoreductase subunit 3 [Sechium edule] >YP_247604.1 NADH dehydrogenase subunit 3 [Cucumis sativus] >Q4VZH0.1 RecName: Full=NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit 3; AltName: Full=NADH-plastoquinone oxidoreductase subunit 3 [Cucumis sativus] >ALF03306.1 NADH dehydrogenase subunit 3 [Cucumis sativus var. hardwickii] >APW82466.1 NADH dehydrogenase subunit 3 [Citrullus lanatus subsp. vulgaris] >AVE15336.1 NdhC [Cucumis sativus var. sativus] >QIT04055.1 NADH dehydrogenase subunit C [Luffa aegyptiaca] >QIT05067.1 NADH dehydrogenase subunit C [Trichosanthes kirilowii] >QJD26476.1 NdhC [Trichosanthes kirilowii var. japonica] >QJD26650.1 NdhC [Trichosanthes rosthornii] >QKX48478.1 NADH-plastoquinone oxidoreductase subunit 3 [Luffa acutangula] >QNM38536.1 NADH-plastoquinone oxidoreductase subunit 3 [Lagenaria siceraria var. microcarpa] >QZL38598.1 NADH dehydrogenase subunit C [Citrullus naudinianus] >QZL38686.1 NADH dehydrogenase subunit C [Citrullus ecirrhosus]) HSP 1 Score: 118.6 bits (296), Expect = 4.0e-23 Identity = 63/70 (90.00%), Postives = 66/70 (94.29%), Query Frame = 0
BLAST of CmaCh00G002330 vs. TAIR 10
Match: ATCG00440.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein ) HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23 Identity = 54/70 (77.14%), Postives = 62/70 (88.57%), Query Frame = 0
BLAST of CmaCh00G002330 vs. TAIR 10
Match: AT2G07751.1 (NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 protein ) HSP 1 Score: 42.4 bits (98), Expect = 3.4e-04 Identity = 25/63 (39.68%), Postives = 41/63 (65.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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