CmaCh00G002240 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGACTCAAACCCTTCGGATCATGGCCGCTTTCATGGTCACTTTCATTTTCTTCCTCGCCCTAACCAAAGCTCAAAACGCCCCCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCGAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCAGTGAAGCTGTGGGCGAACGAGAAGCCGCTGTATGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCTTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCAGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGTATGAAGAGATTTGGTTTTAAAATTTTTATGAATATTAATAAAGTTTGTGAGAGAAACTTGAATTTATTTATTGAAATAAAACTACGATATTGTCTACAATAGTATTAAATTGTCTAGAGCATAAACTCTTGTTGCTGTGTTTTGACTTCCTTACTTATAAACTCATGATCATAGAGTCTCCCCTCTCATTAAGTACACCACATAGAGCCACATTTGAAGCCTATAGATTACCTATGATCATAGAGACTCCCCTCGAACAAAATACACCATAGAGCCTCCCTCGAACAAAATACACCATAGTGCCTCCGCTTAAGTCGATGGATTTCTAAAAGAAACTCCCTTTAATCGAGACTCGACTTCTTTCTTCGGAGACCTTGAACAAAATACGAAATTTGTTCGACACTTTTAACTATGATTTTTAGGCTTACAACTTTTTCGTTCGACATACCTAAGTTAAGTTCATAGTTTGATACCATGTAACTAATCACGAATCTCTATAATGTTATATGATATTTGTCAACTTTGAACATAATATCATGGGTTTGCTTCGAGCTCCCACAAGAAGTCATGTTAATGAAAATGTATTCTTTAGTTATAAATCTATGATCATTTCCGAACAGTCTTCAACACTGAGAGCATCAGCCACCAGCCAATTGTTGTTCCAAGTCACCCGGAAGAAATGCCCTCGGCAGAGATGCGGAAAACAAGTTTAAGGTGTTTTCAGCCTCCAAATCGAGAGAACCACGACGACGGCGATTAACTCCGCTGCAGTATGATACCCACACAGGAGACGAAGACTCACTGCCACAACCTACCGCCGTTTACCAGCTCTGAATATGGAGACCAACGGGGCCGGAGTGACTAAAGGACACCCGACGCTCAAAAGGCGACCATTTTTTTTCTTACTTTACTTATTGGCACTCCATTCGTCTTTTTCTCGGCTTCGTGGGAAAAAAAACAATAATAATAAATAATCAAAATGGTAAAATCAAAGAAATGCCTGTTTTTGTTGAATTACTGAAATTCCCTTTTATCGAAATACTGAAATACTGAAATTTGATAGGTACTGTGATCATTGGGCAATGCTCATGGAAAACTTCTTTAGTACTGGGTTTGGTGGAGAATGTGATTCCTGCACCAATATGACACATTGTTTTAACAGATACCAAGAAGAAGCACATTGATGATCATAAATTGAAAGATTTCAAAGCAAAGAATTATCTATTTCAAGCATTAGAACGTTCGATCTCGGAGACAACCCTCAACAAGGATACAGAAACTCAATTCATCATACCTGATGATGGCGTTGAGGATCCATTGACCTATAAACAGGCAATGAATGATGAAGATAGAGATCTGTGGATCAAAGCCATGAATCTTGAAATGGAGTCAATGTACTTCAATTCAGTCTGGGAACTTGTAGATCAACCAGATGGGGTAAAACCTATTGGTTGCAAATGGATCTATAAGAGGAAACGAGACCAAACCGGTAAGGTACAAACCTTTAAAGCTCGTCTTGTAGAAAAGGGTTATACCCAAAGAGAGGGGGTGGACTATGAAGAAACCTTCTCTCCTGTTGCTATGCTTAAATCGATTAGAATACTCTTGTCTATTGCCACATTTTATGATTATGAAATTTGGCAAATGGATGTCAAGATAGCCTTTCTAAAGGGCAATCTTGAAGAGAGTATCTATATTGCTCAACCAGATGGGTTCATTAAACAAGATCACAAGCATAGGGTTTGCAAGCTTAAAAGATCCATTTATGGGTTGAAGCAAGCATCTCGATCCTGGAATATAAAGTTTGATACCGCGATCAAATCTTATGGCTTTAAACAGAATGTTGACGAACCTTGTGTTTATAAAAGGATTGTCAACTAG ATGTGGACTCAAACCCTTCGGATCATGGCCGCTTTCATGGTCACTTTCATTTTCTTCCTCGCCCTAACCAAAGCTCAAAACGCCCCCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCGAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCAGTGAAGCTGTGGGCGAACGAGAAGCCGCTGTATGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCTTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCAGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGAGACGAAGACTCACTGCCACAACCTACCGCCGTTTACCAGCTCTGAATATGGAGACCAACGGGGCCGGAATACCAAGAAGAAGCACATTGATGATCATAAATTGAAAGATTTCAAAGCAAAGAATTATCTATTTCAAGCATTAGAACGTTCGATCTCGGAGACAACCCTCAACAAGGATACAGAAACTCAATTCATCATACCTGATGATGGCGTTGAGGATCCATTGACCTATAAACAGGCAATGAATGATGAAGATAGAGATCTGTGGATCAAAGCCATGAATCTTGAAATGGAGTCAATGTACTTCAATTCAGTCTGGGAACTTGTAGATCAACCAGATGGGGTAAAACCTATTGGTTGCAAATGGATCTATAAGAGGAAACGAGACCAAACCGGTAAGGTACAAACCTTTAAAGCTCGTCTTGTAGAAAAGGGTTATACCCAAAGAGAGGGGGTGGACTATGAAGAAACCTTCTCTCCTGTTGCTATGCTTAAATCGATTAGAATACTCTTGTCTATTGCCACATTTTATGATTATGAAATTTGGCAAATGGATGTCAAGATAGCCTTTCTAAAGGGCAATCTTGAAGAGAGTATCTATATTGCTCAACCAGATGGGTTCATTAAACAAGATCACAAGCATAGGGTTTGCAAGCTTAAAAGATCCATTTATGGGTTGAAGCAAGCATCTCGATCCTGGAATATAAAGTTTGATACCGCGATCAAATCTTATGGCTTTAAACAGAATGTTGACGAACCTTGTGTTTATAAAAGGATTGTCAACTAG ATGTGGACTCAAACCCTTCGGATCATGGCCGCTTTCATGGTCACTTTCATTTTCTTCCTCGCCCTAACCAAAGCTCAAAACGCCCCCGGTGACTACCTCGCGCTTCACAACCGAGCTCGAGCCGAGGTCGGCGTCGGGCCCATGCAATGGAGCAACACCGTGGCCGCGTACGCTCAAGCCTATGCGGAAAAAAGAAAGGGTGACTGCGCCATGATTCACTCAACCGGGCCGTACGGGGAAAACATAGCCGCGGGCTACTACCCTGAGTTCACCGGGGCGGATGCAGTGAAGCTGTGGGCGAACGAGAAGCCGCTGTATGATCATGCATCGAATAAATGCGTGGGTGGTGAATGTGGGCACTACACTCAGATGGTGTGGCGGAGCTCGGTGCGGCTTGGATGTGCTAGAGTGCCTTGCAAGGCTAATTCTCAGTTTGTTGTTTGCAATTATGATCCTCCAGGCAACTATATTGGGGAAAAGCCTTATGATTCTTGGGTGGAGACGAAGACTCACTGCCACAACCTACCGCCGTTTACCAGCTCTGAATATGGAGACCAACGGGGCCGGAATACCAAGAAGAAGCACATTGATGATCATAAATTGAAAGATTTCAAAGCAAAGAATTATCTATTTCAAGCATTAGAACGTTCGATCTCGGAGACAACCCTCAACAAGGATACAGAAACTCAATTCATCATACCTGATGATGGCGTTGAGGATCCATTGACCTATAAACAGGCAATGAATGATGAAGATAGAGATCTGTGGATCAAAGCCATGAATCTTGAAATGGAGTCAATGTACTTCAATTCAGTCTGGGAACTTGTAGATCAACCAGATGGGGTAAAACCTATTGGTTGCAAATGGATCTATAAGAGGAAACGAGACCAAACCGGTAAGGTACAAACCTTTAAAGCTCGTCTTGTAGAAAAGGGTTATACCCAAAGAGAGGGGGTGGACTATGAAGAAACCTTCTCTCCTGTTGCTATGCTTAAATCGATTAGAATACTCTTGTCTATTGCCACATTTTATGATTATGAAATTTGGCAAATGGATGTCAAGATAGCCTTTCTAAAGGGCAATCTTGAAGAGAGTATCTATATTGCTCAACCAGATGGGTTCATTAAACAAGATCACAAGCATAGGGTTTGCAAGCTTAAAAGATCCATTTATGGGTTGAAGCAAGCATCTCGATCCTGGAATATAAAGTTTGATACCGCGATCAAATCTTATGGCTTTAAACAGAATGTTGACGAACCTTGTGTTTATAAAAGGATTGTCAACTAG MWTQTLRIMAAFMVTFIFFLALTKAQNAPGDYLALHNRARAEVGVGPMQWSNTVAAYAQAYAEKRKGDCAMIHSTGPYGENIAAGYYPEFTGADAVKLWANEKPLYDHASNKCVGGECGHYTQMVWRSSVRLGCARVPCKANSQFVVCNYDPPGNYIGEKPYDSWVETKTHCHNLPPFTSSEYGDQRGRNTKKKHIDDHKLKDFKAKNYLFQALERSISETTLNKDTETQFIIPDDGVEDPLTYKQAMNDEDRDLWIKAMNLEMESMYFNSVWELVDQPDGVKPIGCKWIYKRKRDQTGKVQTFKARLVEKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKIAFLKGNLEESIYIAQPDGFIKQDHKHRVCKLKRSIYGLKQASRSWNIKFDTAIKSYGFKQNVDEPCVYKRIVN Homology
BLAST of CmaCh00G002240 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1) HSP 1 Score: 206.1 bits (523), Expect = 8.1e-52 Identity = 93/157 (59.24%), Postives = 114/157 (72.61%), Query Frame = 0
BLAST of CmaCh00G002240 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 6.0e-47 Identity = 88/195 (45.13%), Postives = 134/195 (68.72%), Query Frame = 0
BLAST of CmaCh00G002240 vs. ExPASy Swiss-Prot
Match: P33154 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g14610 PE=1 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 3.3e-45 Identity = 83/155 (53.55%), Postives = 110/155 (70.97%), Query Frame = 0
BLAST of CmaCh00G002240 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 2.1e-44 Identity = 84/152 (55.26%), Postives = 103/152 (67.76%), Query Frame = 0
BLAST of CmaCh00G002240 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 4.8e-44 Identity = 86/151 (56.95%), Postives = 105/151 (69.54%), Query Frame = 0
BLAST of CmaCh00G002240 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 184.5 bits (467), Expect = 1.8e-46 Identity = 89/161 (55.28%), Postives = 112/161 (69.57%), Query Frame = 0
BLAST of CmaCh00G002240 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 ) HSP 1 Score: 184.1 bits (466), Expect = 2.3e-46 Identity = 83/155 (53.55%), Postives = 110/155 (70.97%), Query Frame = 0
BLAST of CmaCh00G002240 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein ) HSP 1 Score: 181.0 bits (458), Expect = 2.0e-45 Identity = 82/151 (54.30%), Postives = 101/151 (66.89%), Query Frame = 0
BLAST of CmaCh00G002240 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 ) HSP 1 Score: 176.4 bits (446), Expect = 4.9e-44 Identity = 82/161 (50.93%), Postives = 111/161 (68.94%), Query Frame = 0
BLAST of CmaCh00G002240 vs. TAIR 10
Match: AT2G19990.1 (pathogenesis-related protein-1-like ) HSP 1 Score: 173.3 bits (438), Expect = 4.1e-43 Identity = 80/136 (58.82%), Postives = 100/136 (73.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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