CmaCh00G000980 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh00G000980
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Location	Cma_Chr00: 4658852 .. 4662162 (-)
RNA-Seq Expression	CmaCh00G000980
Synteny	CmaCh00G000980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAAGACATGGTCTCTTTGGATCCCATTGAATTTCATTCGGAGGAGGAACCTTATAAAGATCGTATTGATTCTTATCAAATAAAGACAGGATTAACTAACTGAGGCTATTCAAAGAGGCACAGGTAAATGAAACGGTATTCCCATAGCAATTGGGATTATGGATTTTTCGTTTATGGGGGTGGGATCTGTAGTAGGTGAGAGAATCACCCGTTTGATCGAGTATGCTACAAATCAATCAATTTTGATCTCTGATTTGAGTGTGTGCTTCTGGAGGAGCACGCATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGGTAAAAGAGTAATTTCTTGAACATTGATTGAATACGACAGTCCGTAGGGTTCCCAGGTGGCTGACGTTCGATAAGGGCTTATTCGATCTAAACCACGTAATCCTTTAAAAGGTGTTTGAGTGAGTTATTTCAGCTCCACACTTTCGTTTCCTCGAATCAAAATTCAATCAAGTCAAACCTTACTTAAAACTTCCAAAATTCATTCTTATTTGTGTGACGAACAAGTAGTTATTTAGTTTATAAGAATCAAAGTCAAAATTCGCAGAATGGATTTTTCTTTGGTAACATAAGATGAAATTGTAGAAAGAATCATGCGGAGAAATGGGTTTGACCGATATTCTTGATTAGTAATTAGGAAGCCCCTATTAAATAAAAGAGCAAATTCTTTCTTCTGCTAAATTAGGCGGGAATAAAATGAATGAATTTCATGCTCCCTTCTTACATTACATGTGGATATATAATCCAACTATAGCAAATAACAGCATAGAGTCTTGCATCTTTCTACATCTCTAAAGGATCTCTAGTTTGACTACGAGTCCCTGTTGTTGGATCGGATTGTAATGAACTTTTGGGTAACAAGTAGATATTACTTTGTGGAATTATATATGAATTAGTATAATTATCAGATACCTTTTATAAAAAGAAATAAATAACAGGTAAATTAATATAACAAGAAATAACAGGTATAAATATTAAGTCGAGGTATCCATTCTATGACAAACTTACTCTCTCTCTCCTTTTGTGCCTTTAGTAGGCATAGTATTTCCGGCAATTGCAATGGCTTCTTTATCTCTTCATGTTCAAAAAAACAAAATTATTTATGCTACACGTCTATTTGTTTTTTTCAAAACTTAGACTTTGACGATAACACAGCTATCTATTTAGTAGACGGCAGTCTAACATGTGGCTGACTCCAAACATAAGCAATTATACATGCGTAAACATGATATCTGAGGAAATGAATTAGAAAGTCTTTGAAAATCTCCAATATATAACCGATCGGGCGATGAATGGTTGAGATGTCAAATCAATATATCTATACGGATGTAGGTATCCATAGGGAATCATATAAAGGTTATGTTATTATTTGAGATCTAAGTAATTCGATGAGTTACTCCGTCAGTCAAGATTCACATCAAAATAGTGCTAGTTGATTAGAGTTACTTTGGAAACAAAAAAAGTCAAATATGCACGTTATTCTATCAATTCAAATAAAATGCAATGAGATCTAGTATGAGTTGGCGATCAGAATGGATATGGATAGAATTTATAAGAAAGAGGATCTCAAAAGCAATTTCGGCTCGGCCTTTATCTATCCCCTTTTTTTAGGTTCATTAGGGTGTTGGTTTGATTTCCGTCTCAACAAAGAATTTCTTTGTTTTCCACGGGGGATCGTAATGTCTTTCTATGGGATTGCGTCTTTTTATTAGCTCCTATTTATGGTGCACCATTTTGTGGAATGTAGGCAGGGGTTATGATATGGAAAAGAAGAAATAGTGTCTATTTTGGGGGGTTTCCGGGACAAAATCCTAGAATCTTCCTTCGATTCCTTATGAAAGACATTCAGTCCATCAGAATAGAAGTGAAAGAGGATATTTATACACGTCGTGTCCTTTATATGGAAATCAGAGGCCAAGGGGCCCTTGACTCGTACCGATCAAAATTTGACCCACCCCACGAGAGAGAAATTCGAAATTGAGCAAAAGGCTGCCGAATTGGTGGCCTATTTCTTGCGTGTACCAATTGAAGTTTCCTTGAGGAAGTTCAGAATGAATGCTTTCTTAGTTCGTAGCAAGAGGGATAAAACGAAAAAGAAAGAATAGTCTTTTTTATAGACCCTAGTATAACTTAACGAAAATTTCTGAAGAATGCTCATTCATTTGAGCCAAAGCAGACGTACAGGGAACAGACGGAAAACTGTCTTTCTTTGTCCGAAATTATGATGCGTATGTAACTCCACAGTAACAAAAGTGGATTCTTTGATATTTGCTTTCTGTATTATTTCGAAATTCAAGGATTAACTAATGAACACGGAATGGATTCATAATAGTATCCATATAACTTTACATAGAACTTATGTTTGATATAAATATTAGTAGTGTAGAGAGGTAACGAATGAAGTGAGTTCATTAATAAATCAAAGACGAATGGCAAACAAGAAAGCATTCATTCCCCTTCTATATCTTGCATCTATAGTCTTTTTGCCCGGGTGGATCTCTATTTAATAAAAGCCTAGAATCTTGGGTTACTCATTGGTGGAATACTGGTCAATCCGAAATGTTGTTGAATTAGATTCAAGAAAAGATTATTATAACAAAAGTGAGAGAATTAGAGGAACTCTTTCCCTTGGACGAAATGTTAAAGGAATACCCAGAAAGACATCTATCTACAAAAGCTTCGTATCAGAATCTACAAAGAAAGGAAAGGATCCATCCAATTGATCAAGATGCACAATGAACGAGGATCGTATCCATACGATTTTGCACTTCTCCACAAATAGAATCCGTTTCATTATTCTAAGTGGTTATTCTCTATTCTTGGTAATTAAGAACTTGTTATTCTTCACTCTTGGGTTCATGAGTTCCTATATAATTTAAGCGACACAATCAAATCCTTTTCTATTCTTTTATTAACTGATTTATGTATCGGTATAGGATTCCATTCGCCCCATGGTTGGGAACTAATAATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTCTATCCAGTTTTGTTTCCACTTTGTCGATCATTCTGGACACAACAAATATTGGATCGTTATTTAAATCGTCTATCTCCGTCACTTGTAGTGATTGA

mRNA sequence

ATGGATGAAGACATGTGTGTGCTTCTGGAGGAGCACGCATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGGATTCCATTCGCCCCATGGTTGGGAACTAATAATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTCTATCCAGTTTTGTTTCCACTTTGTCGATCATTCTGGACACAACAAATATTGGATCGTTATTTAAATCGTCTATCTCCGTCACTTGTAGTGATTGA

Coding sequence (CDS)

ATGGATGAAGACATGTGTGTGCTTCTGGAGGAGCACGCATGCAAGAAGGAAGGAAGTGTGAGCTTGATGCAAATGTCAAAAAGATCTTCTGCTTTATATGATTATCAATCAAATAAAAGATTCTTCTATGTAGCAATCCTTACATCTCCTACTACTGGTGGGGTGACAGCTAGTTTTGGTATCTTGGGGGATATCATTATTGCCGAACCCAATGCCTACATCGCATTTGCGGGATTCCATTCGCCCCATGGTTGGGAACTAATAATTGGTTCTGTCTACAAAGATTTTGGATTTTCTCATAACGATCAAATTCTATCCAGTTTTGTTTCCACTTTGTCGATCATTCTGGACACAACAAATATTGGATCGTTATTTAAATCGTCTATCTCCGTCACTTGTAGTGATTGA

Protein sequence

MDEDMCVLLEEHACKKEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIAFAGFHSPHGWELIIGSVYKDFGFSHNDQILSSFVSTLSIILDTTNIGSLFKSSISVTCSD

Homology

[Close]

BLAST of CmaCh00G000980 vs. ExPASy Swiss-Prot
Match: Q09X08 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Morus indica OX=248361 GN=accD PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.6e-24
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FY+AILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 377 QEGSLSLMQMAKISSALYDYQSNKKLFYIAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 436

Query: 76  FAG 79
           FAG
Sbjct: 437 FAG 439

[Close]

BLAST of CmaCh00G000980 vs. ExPASy Swiss-Prot
Match: Q332W9 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Lactuca sativa OX=4236 GN=accD PE=3 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 8.6e-24
Identity = 56/63 (88.89%), Postives = 60/63 (95.24%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGSVSLMQM+K SSALYDYQSNK+ FYV ILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 390 QEGSVSLMQMAKISSALYDYQSNKKLFYVPILTSPTTGGVTASFGMLGDIIIAEPNAYIA 449

Query: 76  FAG 79
           FAG
Sbjct: 450 FAG 452

[Close]

BLAST of CmaCh00G000980 vs. ExPASy Swiss-Prot
Match: B1A944 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Carica papaya OX=3649 GN=accD PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-23
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FYV+ILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 376 QEGSLSLMQMAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIA 435

Query: 76  FAG 79
           FAG
Sbjct: 436 FAG 438

[Close]

BLAST of CmaCh00G000980 vs. ExPASy Swiss-Prot
Match: Q09MG9 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Citrus sinensis OX=2711 GN=accD PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-23
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FYV+ILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 374 QEGSLSLMQMAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIA 433

Query: 76  FAG 79
           FAG
Sbjct: 434 FAG 436

[Close]

BLAST of CmaCh00G000980 vs. ExPASy Swiss-Prot
Match: A0A344 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Coffea arabica OX=13443 GN=accD PE=3 SV=2)

HSP 1 Score: 110.9 bits (276), Expect = 1.1e-23
Identity = 55/63 (87.30%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+ FYV+ILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 372 QEGSLSLMQMAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIA 431

Query: 76  FAG 79
           FAG
Sbjct: 432 FAG 434

[Close]

BLAST of CmaCh00G000980 vs. ExPASy TrEMBL
Match: A0A4D8Y7M7 (Cytochrome f OS=Salvia splendens OX=180675 GN=accD PE=3 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 2.1e-25
Identity = 70/114 (61.40%), Postives = 80/114 (70.18%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAE------ 75
           +EGS+SLMQM+K SSALYDYQSNK+  YV+ILTSPTTGGVTASFG    II+        
Sbjct: 115 QEGSLSLMQMAKISSALYDYQSNKKLLYVSILTSPTTGGVTASFGNEELIILNSWAQEFL 174

Query: 76  ---PNAYIAFA---------GFHSPHGWELIIGSVYKDFGFSHNDQILSSFVST 112
               +   AF+         GFHSPHGWEL+IGSVYKDFGF HNDQI+S  VST
Sbjct: 175 YNLSDTVKAFSILLLTDLCIGFHSPHGWELMIGSVYKDFGFGHNDQIISGLVST 228

[Close]

BLAST of CmaCh00G000980 vs. ExPASy TrEMBL
Match: A0A4D8YSA8 (Cytochrome f OS=Salvia splendens OX=180675 GN=Saspl_049914 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 8.0e-25
Identity = 69/114 (60.53%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAE------ 75
           +EGS+SLMQM+K SSALYDYQSNK+  YV+ILTSPTTGGVTA FG    II+        
Sbjct: 127 QEGSLSLMQMAKISSALYDYQSNKKLLYVSILTSPTTGGVTARFGNEELIILNSWAQEFL 186

Query: 76  ---PNAYIAFA---------GFHSPHGWELIIGSVYKDFGFSHNDQILSSFVST 112
               +   AF+         GFHSPHGWEL+IGSVYKDFGF HNDQI+S  VST
Sbjct: 187 YNLSDTVKAFSILLLTDLCIGFHSPHGWELMIGSVYKDFGFGHNDQIISGLVST 240

[Close]

BLAST of CmaCh00G000980 vs. ExPASy TrEMBL
Match: A0A411JX73 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Reaumuria trigyna OX=1091135 GN=accD PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.7e-22
Identity = 57/63 (90.48%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+FFYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 384 QEGSLSLMQMAKISSALYDYQSNKKFFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 443

Query: 76  FAG 79
           FAG
Sbjct: 444 FAG 446

[Close]

BLAST of CmaCh00G000980 vs. ExPASy TrEMBL
Match: A0A411JWZ8 (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Hololachna songarica OX=194564 GN=accD PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.7e-22
Identity = 57/63 (90.48%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+FFYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 354 QEGSLSLMQMAKISSALYDYQSNKKFFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 413

Query: 76  FAG 79
           FAG
Sbjct: 414 FAG 416

[Close]

BLAST of CmaCh00G000980 vs. ExPASy TrEMBL
Match: A0A7J6ENJ1 (Chloroplast envelope membrane protein OS=Cannabis sativa OX=3483 GN=F8388_004514 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 6.4e-22
Identity = 76/206 (36.89%), Postives = 88/206 (42.72%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K S ALYDYQSNK+ FYVAILTSPTTG VTASFG+LGDIIIAEPNAYIA
Sbjct: 331 QEGSLSLMQMAKISYALYDYQSNKKLFYVAILTSPTTGRVTASFGMLGDIIIAEPNAYIA 390

Query: 76  FA---------------------------------------------------------- 108
           FA                                                          
Sbjct: 391 FAGKRVIEQTLNETVLKGSQVSEYLFHKGLFDLIVQRNLLKGVLCELFQLHAFSPLNQIQ 450

[Close]

BLAST of CmaCh00G000980 vs. NCBI nr
Match: YP_009569606.1 (acetyl-CoA carboxylase carboxyltransferase beta subunit [Reaumuria trigyna] >QBC69698.1 acetyl-CoA carboxylase carboxyltransferase beta subunit [Reaumuria trigyna])

HSP 1 Score: 114.4 bits (285), Expect = 7.7e-22
Identity = 57/63 (90.48%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+FFYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 384 QEGSLSLMQMAKISSALYDYQSNKKFFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 443

Query: 76  FAG 79
           FAG
Sbjct: 444 FAG 446

[Close]

BLAST of CmaCh00G000980 vs. NCBI nr
Match: YP_009570281.1 (acetyl-CoA carboxylase carboxyltransferase beta subunit [Hololachna songarica] >QBC69616.1 acetyl-CoA carboxylase carboxyltransferase beta subunit [Hololachna songarica])

HSP 1 Score: 114.4 bits (285), Expect = 7.7e-22
Identity = 57/63 (90.48%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SSALYDYQSNK+FFYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 354 QEGSLSLMQMAKISSALYDYQSNKKFFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 413

Query: 76  FAG 79
           FAG
Sbjct: 414 FAG 416

[Close]

BLAST of CmaCh00G000980 vs. NCBI nr
Match: KAF4360007.1 (hypothetical protein F8388_004514 [Cannabis sativa])

HSP 1 Score: 113.6 bits (283), Expect = 1.3e-21
Identity = 76/206 (36.89%), Postives = 88/206 (42.72%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K S ALYDYQSNK+ FYVAILTSPTTG VTASFG+LGDIIIAEPNAYIA
Sbjct: 331 QEGSLSLMQMAKISYALYDYQSNKKLFYVAILTSPTTGRVTASFGMLGDIIIAEPNAYIA 390

Query: 76  FA---------------------------------------------------------- 108
           FA                                                          
Sbjct: 391 FAGKRVIEQTLNETVLKGSQVSEYLFHKGLFDLIVQRNLLKGVLCELFQLHAFSPLNQIQ 450

[Close]

BLAST of CmaCh00G000980 vs. NCBI nr
Match: ABY57509.1 (AccD, partial [Triticum monococcum])

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-21
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 16 KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
          +EGSVSLMQM+K SSALYDYQSNK+ FYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 16 QEGSVSLMQMAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 75

Query: 76 FAG 79
          FAG
Sbjct: 76 FAG 78

[Close]

BLAST of CmaCh00G000980 vs. NCBI nr
Match: YP_009447459.1 (acetyl-CoA carboxylase beta subunit [Cucurbita maxima] >ATY69918.1 acetyl-CoA carboxylase beta subunit [Cucurbita maxima])

HSP 1 Score: 113.2 bits (282), Expect = 1.7e-21
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGSVSLMQM+K SSALYDYQSNK+ FYVAILTSPTTGGVTASFG+LGDIIIAEPNAYIA
Sbjct: 366 QEGSVSLMQMAKISSALYDYQSNKKLFYVAILTSPTTGGVTASFGMLGDIIIAEPNAYIA 425

Query: 76  FAG 79
           FAG
Sbjct: 426 FAG 428

[Close]

BLAST of CmaCh00G000980 vs. TAIR 10
Match: ATCG00500.1 (acetyl-CoA carboxylase carboxyl transferase subunit beta )

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21
Identity = 50/63 (79.37%), Postives = 58/63 (92.06%), Query Frame = 0


Query: 16  KEGSVSLMQMSKRSSALYDYQSNKRFFYVAILTSPTTGGVTASFGILGDIIIAEPNAYIA 75
           +EGS+SLMQM+K SS L DYQS+K+ FY++ILTSPTTGGVTASFG+LGDIIIAEP AYIA
Sbjct: 370 QEGSLSLMQMAKISSVLCDYQSSKKLFYISILTSPTTGGVTASFGMLGDIIIAEPYAYIA 429

Query: 76  FAG 79
           FAG
Sbjct: 430 FAG 432

[Close]

BLAST of CmaCh00G000980 vs. TAIR 10
Match: ATCG00530.1 (CemA-like proton extrusion protein-related )

HSP 1 Score: 69.7 bits (169), Expect = 2.0e-12
Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 0


Query: 78  GFHSPHGWELIIGSVYKDFGFSHNDQILSSFVSTLSIILDT 119
           GFHSPHGWEL+IG +YKDFGF+H +QILS  VST  +ILDT
Sbjct: 163 GFHSPHGWELMIGYIYKDFGFAHYEQILSGLVSTFPVILDT 203

The following BLAST results are available for this feature:

BLAST of CmaCh00G000980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09X08	6.6e-24	87.30	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q332W9	8.6e-24	88.89	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
B1A944	1.1e-23	87.30	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
Q09MG9	1.1e-23	87.30	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]
A0A344	1.1e-23	87.30	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O...	[more]

BLAST of CmaCh00G000980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4D8Y7M7	2.1e-25	61.40	Cytochrome f OS=Salvia splendens OX=180675 GN=accD PE=3 SV=1	[more]
A0A4D8YSA8	8.0e-25	60.53	Cytochrome f OS=Salvia splendens OX=180675 GN=Saspl_049914 PE=3 SV=1	[more]
A0A411JX73	3.7e-22	90.48	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Reaumuria tri...	[more]
A0A411JWZ8	3.7e-22	90.48	Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Hololachna so...	[more]
A0A7J6ENJ1	6.4e-22	36.89	Chloroplast envelope membrane protein OS=Cannabis sativa OX=3483 GN=F8388_004514...	[more]

BLAST of CmaCh00G000980 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009569606.1	7.7e-22	90.48	acetyl-CoA carboxylase carboxyltransferase beta subunit [Reaumuria trigyna] >QBC...	[more]
YP_009570281.1	7.7e-22	90.48	acetyl-CoA carboxylase carboxyltransferase beta subunit [Hololachna songarica] >...	[more]
KAF4360007.1	1.3e-21	36.89	hypothetical protein F8388_004514 [Cannabis sativa]	[more]
ABY57509.1	1.7e-21	90.48	AccD, partial [Triticum monococcum]	[more]
YP_009447459.1	1.7e-21	90.48	acetyl-CoA carboxylase beta subunit [Cucurbita maxima] >ATY69918.1 acetyl-CoA ca...	[more]

BLAST of CmaCh00G000980 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00500.1	1.1e-21	79.37	acetyl-CoA carboxylase carboxyl transferase subunit beta	[more]
ATCG00530.1	2.0e-12	73.17	CemA-like proton extrusion protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000438	Acetyl-CoA carboxylase carboxyl transferase, beta subunit	PRINTS	PR01070	ACCCTRFRASEB	coord: 47..64 score: 84.78 coord: 9..27 score: 47.14
IPR004282	Chloroplast envelope membrane protein, CemA	PFAM	PF03040	CemA	coord: 76..119 e-value: 2.6E-13 score: 50.5
None	No IPR available	GENE3D	3.90.226.10		coord: 13..107 e-value: 3.1E-15 score: 58.4
None	No IPR available	PANTHER	PTHR42995	FAMILY NOT NAMED	coord: 14..107
None	No IPR available	PANTHER	PTHR42995:SF5	ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTIC	coord: 14..107
IPR011762	Acetyl-coenzyme A carboxyltransferase, N-terminal	PROSITE	PS50980	COA_CT_NTER	coord: 1..135 score: 22.019762
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 16..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh00G000980.1	CmaCh00G000980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:2001295	malonyl-CoA biosynthetic process
cellular_component	GO:0009317	acetyl-CoA carboxylase complex
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003989	acetyl-CoA carboxylase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016743	carboxyl- or carbamoyltransferase activity
molecular_function	GO:0008270	zinc ion binding