CmaCh00G000420 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGGATAAGCTTAATCATCGAGAGGGAAATAGCTCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGGTTTGTCAGGAGGTTTACCAAGAAGCATCCACCCTTGAAAGAGTGCGTAATAGCTCATTGATTGAGCGCTCTTGCGCCGAAGTTGAACGGGACTAAGCGATCTGCCGAAGCTGTGGTATGTAAAAAAACATTGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACTCGTGCGAGCAGTGGTGGATGAAGCAGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTTGTGAGAATCCAATGCCCCAAAAACCTAAGGGTTCCACCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCAAAAGGCGTAGTCGATGGAAAATAG ATGGGGGATAAGCTTAATCATCGAGAGGGAAATAGCTCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGTTGAACGGGACTAAGCGATCTGCCGAAGCTGTGGTATGTAAAAAAACATTGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACTCGTGCGAGCAGTGTAACGCAAACATTTGTGAGAATCCAATGCCCCAAAAACCTAAGGGTTCCACCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCAAAAGGCGTAGTCGATGGAAAATAG ATGGGGGATAAGCTTAATCATCGAGAGGGAAATAGCTCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGTTGAACGGGACTAAGCGATCTGCCGAAGCTGTGGTATGTAAAAAAACATTGGTAGGGGAGCGTTCCGCCTTAGAGGGAAGCACTCGTGCGAGCAGTGTAACGCAAACATTTGTGAGAATCCAATGCCCCAAAAACCTAAGGGTTCCACCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCAAAAGGCGTAGTCGATGGAAAATAG MGDKLNHREGNSSDHQLRPLNDRSVIKEVGVQLNGTKRSAEAVVCKKTLVGERSALEGSTRASSVTQTFVRIQCPKNLRVPPQGSSTEGESGPKIRPKGVVDGK Homology
BLAST of CmaCh00G000420 vs. ExPASy TrEMBL
Match: A0A2G3B5T9 (Uncharacterized protein OS=Capsicum chinense OX=80379 GN=BC332_27106 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 8.4e-22 Identity = 63/104 (60.58%), Postives = 70/104 (67.31%), Query Frame = 0
BLAST of CmaCh00G000420 vs. ExPASy TrEMBL
Match: A0A6N2L9E4 (Uncharacterized protein ycf68 OS=Salix viminalis OX=40686 GN=SVIM_LOCUS197109 PE=3 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 9.3e-21 Identity = 68/132 (51.52%), Postives = 74/132 (56.06%), Query Frame = 0
BLAST of CmaCh00G000420 vs. ExPASy TrEMBL
Match: A0A5A7VA45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2613G00040 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.3e-17 Identity = 62/106 (58.49%), Postives = 71/106 (66.98%), Query Frame = 0
BLAST of CmaCh00G000420 vs. ExPASy TrEMBL
Match: A0A5A7SRJ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1620G00020 PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.6e-17 Identity = 62/106 (58.49%), Postives = 70/106 (66.04%), Query Frame = 0
BLAST of CmaCh00G000420 vs. ExPASy TrEMBL
Match: A0A0R0IG95 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_09G164000 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 9.0e-16 Identity = 51/64 (79.69%), Postives = 53/64 (82.81%), Query Frame = 0
BLAST of CmaCh00G000420 vs. NCBI nr
Match: KAG9438445.1 (hypothetical protein H6P81_021615 [Aristolochia fimbriata]) HSP 1 Score: 119.0 bits (297), Expect = 2.4e-23 Identity = 71/115 (61.74%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of CmaCh00G000420 vs. NCBI nr
Match: KAG9438465.1 (hypothetical protein H6P81_021588 [Aristolochia fimbriata]) HSP 1 Score: 119.0 bits (297), Expect = 2.4e-23 Identity = 71/115 (61.74%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of CmaCh00G000420 vs. NCBI nr
Match: KAG9438520.1 (hypothetical protein H6P81_021535 [Aristolochia fimbriata]) HSP 1 Score: 117.9 bits (294), Expect = 5.4e-23 Identity = 70/115 (60.87%), Postives = 77/115 (66.96%), Query Frame = 0
BLAST of CmaCh00G000420 vs. NCBI nr
Match: PHU01855.1 (hypothetical protein BC332_27106 [Capsicum chinense]) HSP 1 Score: 112.8 bits (281), Expect = 1.7e-21 Identity = 63/104 (60.58%), Postives = 70/104 (67.31%), Query Frame = 0
BLAST of CmaCh00G000420 vs. NCBI nr
Match: KAG9438481.1 (hypothetical protein H6P81_021574 [Aristolochia fimbriata]) HSP 1 Score: 107.5 bits (267), Expect = 7.3e-20 Identity = 65/107 (60.75%), Postives = 70/107 (65.42%), Query Frame = 0
BLAST of CmaCh00G000420 vs. TAIR 10
Match: AT2G07706.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:ATMG00470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 1.2e-04 Identity = 21/24 (87.50%), Postives = 21/24 (87.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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