CmUC11G212870 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTAAGTCTCAGCTGAAGCTTTTTGGCTTCAACATCTCAAAAGAGAATAAAACAGTTTCAAATTTTATAGAGCCGCCGGCGGTGGAGTGGCCGGAATCTCAAAGTCTTCATGCCCCAAAGTTCGAGTGCCAATATTGTTGCAGAGAATTTTCCAATTCGCAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAAAGACAGCTTTTGAAGAGGGCTCAAATGAAATCTTGGCATCCTAATTACTTCACAGCTCTGCACGTGCAGAACTGGCTGTCGTCGTCCTTTATGCCGCCGCCGGCGGGGCTCTACGCTATGTCGCAAGAGGTGCGGCGGCAGGCCGGAGTTCAAGGAGACGAGGATGTTCCCGGTAGGAGTTTGGGCCTGGATTTACAGCTTAGCCTTGGGCCTGGTAAGCCTTGA ATGCCTAAGTCTCAGCTGAAGCTTTTTGGCTTCAACATCTCAAAAGAGAATAAAACAGTTTCAAATTTTATAGAGCCGCCGGCGGTGGAGTGGCCGGAATCTCAAAGTCTTCATGCCCCAAAGTTCGAGTGCCAATATTGTTGCAGAGAATTTTCCAATTCGCAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAAAGACAGCTTTTGAAGAGGGCTCAAATGAAATCTTGGCATCCTAATTACTTCACAGCTCTGCACGTGCAGAACTGGCTGTCGTCGTCCTTTATGCCGCCGCCGGCGGGGCTCTACGCTATGTCGCAAGAGGTGCGGCGGCAGGCCGGAGTTCAAGGAGACGAGGATGTTCCCGGTAGGAGTTTGGGCCTGGATTTACAGCTTAGCCTTGGGCCTGGTAAGCCTTGA ATGCCTAAGTCTCAGCTGAAGCTTTTTGGCTTCAACATCTCAAAAGAGAATAAAACAGTTTCAAATTTTATAGAGCCGCCGGCGGTGGAGTGGCCGGAATCTCAAAGTCTTCATGCCCCAAAGTTCGAGTGCCAATATTGTTGCAGAGAATTTTCCAATTCGCAAGCTTTGGGCGGCCATCAAAACGCCCACAGAGAAGAAAGACAGCTTTTGAAGAGGGCTCAAATGAAATCTTGGCATCCTAATTACTTCACAGCTCTGCACGTGCAGAACTGGCTGTCGTCGTCCTTTATGCCGCCGCCGGCGGGGCTCTACGCTATGTCGCAAGAGGTGCGGCGGCAGGCCGGAGTTCAAGGAGACGAGGATGTTCCCGGTAGGAGTTTGGGCCTGGATTTACAGCTTAGCCTTGGGCCTGGTAAGCCTTGA MPKSQLKLFGFNISKENKTVSNFIEPPAVEWPESQSLHAPKFECQYCCREFSNSQALGGHQNAHREERQLLKRAQMKSWHPNYFTALHVQNWLSSSFMPPPAGLYAMSQEVRRQAGVQGDEDVPGRSLGLDLQLSLGPGKP Homology
BLAST of CmUC11G212870 vs. NCBI nr
Match: XP_038886238.1 (zinc finger protein 6-like [Benincasa hispida]) HSP 1 Score: 223.4 bits (568), Expect = 1.2e-54 Identity = 121/166 (72.89%), Postives = 127/166 (76.51%), Query Frame = 0
BLAST of CmUC11G212870 vs. NCBI nr
Match: KAG6578343.1 (Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 211.5 bits (537), Expect = 4.8e-51 Identity = 113/160 (70.62%), Postives = 123/160 (76.88%), Query Frame = 0
BLAST of CmUC11G212870 vs. NCBI nr
Match: XP_023550962.1 (zinc finger protein 6-like [Cucurbita pepo subsp. pepo] >KAG7015922.1 Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 211.5 bits (537), Expect = 4.8e-51 Identity = 113/160 (70.62%), Postives = 123/160 (76.88%), Query Frame = 0
BLAST of CmUC11G212870 vs. NCBI nr
Match: XP_022939247.1 (zinc finger protein 6-like [Cucurbita moschata]) HSP 1 Score: 207.6 bits (527), Expect = 7.0e-50 Identity = 111/160 (69.38%), Postives = 121/160 (75.62%), Query Frame = 0
BLAST of CmUC11G212870 vs. NCBI nr
Match: XP_022993371.1 (zinc finger protein 6-like [Cucurbita maxima]) HSP 1 Score: 207.2 bits (526), Expect = 9.1e-50 Identity = 111/160 (69.38%), Postives = 121/160 (75.62%), Query Frame = 0
BLAST of CmUC11G212870 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 5.3e-16 Identity = 50/100 (50.00%), Postives = 61/100 (61.00%), Query Frame = 0
BLAST of CmUC11G212870 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 4.4e-15 Identity = 52/127 (40.94%), Postives = 70/127 (55.12%), Query Frame = 0
BLAST of CmUC11G212870 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of CmUC11G212870 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08 Identity = 35/82 (42.68%), Postives = 43/82 (52.44%), Query Frame = 0
BLAST of CmUC11G212870 vs. ExPASy Swiss-Prot
Match: P93751 (Zinc finger protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZFP8 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.6e-07 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of CmUC11G212870 vs. ExPASy TrEMBL
Match: A0A6J1FG99 (zinc finger protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111445220 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 3.4e-50 Identity = 111/160 (69.38%), Postives = 121/160 (75.62%), Query Frame = 0
BLAST of CmUC11G212870 vs. ExPASy TrEMBL
Match: A0A6J1JW51 (zinc finger protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111489415 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 4.4e-50 Identity = 111/160 (69.38%), Postives = 121/160 (75.62%), Query Frame = 0
BLAST of CmUC11G212870 vs. ExPASy TrEMBL
Match: A0A0A0LQ31 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G404810 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.9e-24 Identity = 60/82 (73.17%), Postives = 68/82 (82.93%), Query Frame = 0
BLAST of CmUC11G212870 vs. ExPASy TrEMBL
Match: A0A1R3IC83 (Zinc finger protein 6 OS=Corchorus capsularis OX=210143 GN=CCACVL1_13105 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 9.9e-18 Identity = 52/98 (53.06%), Postives = 70/98 (71.43%), Query Frame = 0
BLAST of CmUC11G212870 vs. ExPASy TrEMBL
Match: A0A7J7E054 (C2H2-type domain-containing protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW02G00930 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.3e-17 Identity = 58/147 (39.46%), Postives = 81/147 (55.10%), Query Frame = 0
BLAST of CmUC11G212870 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 ) HSP 1 Score: 85.5 bits (210), Expect = 3.7e-17 Identity = 50/100 (50.00%), Postives = 61/100 (61.00%), Query Frame = 0
BLAST of CmUC11G212870 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 82.4 bits (202), Expect = 3.2e-16 Identity = 52/127 (40.94%), Postives = 70/127 (55.12%), Query Frame = 0
BLAST of CmUC11G212870 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 ) HSP 1 Score: 61.2 bits (147), Expect = 7.5e-10 Identity = 36/88 (40.91%), Postives = 50/88 (56.82%), Query Frame = 0
BLAST of CmUC11G212870 vs. TAIR 10
Match: AT3G58070.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 60.8 bits (146), Expect = 9.8e-10 Identity = 35/82 (42.68%), Postives = 43/82 (52.44%), Query Frame = 0
BLAST of CmUC11G212870 vs. TAIR 10
Match: AT2G41940.1 (zinc finger protein 8 ) HSP 1 Score: 56.6 bits (135), Expect = 1.9e-08 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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