CmUC11G212610 (gene) Watermelon (USVL531) v1

Overview
NameCmUC11G212610
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionRibosomal protein S19
LocationCmU531Chr11: 11962450 .. 11965951 (-)
RNA-Seq ExpressionCmUC11G212610
SyntenyCmUC11G212610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTAAAGGAGGGGAAGGAATTAGGATTTATTATAAATCCTCCTCGGTTTGCGTGCAGATTTAAAAAAAAAAAGGAAATCTCTCCCTCTTCCCTCTCCCTCTCCGCCGCCACTCTCTCCCCCTTACTCTCCCGATTTTCTCTGCCGCCGCCGCTCTCCCTTCCTTTTTCCGTTCTCCCTCTCCACCGCCACACTCTCTCTTTACCTATGTTTCCGCTCTCTCTCTCTCAGTCGCCGCTCGCTTTCCCGGAAGTTGCACGCTCAGAATCACGCTCTCTCGCCCAGGATCTCGCTCTCTCGCTCGGACTCTCGCTCTTTCGCTCTCTTGCTTGGATTCTCGCTCTCTTGCTCTTGCTCAGAATCTCGCTCTCGGCTACGACTAATTGCTTGCCTGATCGTCAGTCACCGGATCAATATTCCCTAGGTGGTCGGCGATTACTTTGGTTCGTAGGATCGGAGGAAACTGCGAGTTTAGCCACGTTCGGGTAAGGACTCTCTGGAACAAACTTTGAGTTTACTTATGACGGGTTAGGCTTGATGAATAACTTAAGTTAGGGGAATTGTATTCCTAGTTTATTCAGGACTTTTGCGAGAGTTGCGGTGTGGTTAGCCTTATGGATCAACCTTCAGGTAAGTGATCTTACTACCTGAACTGCCTTCGGGCCATATGATTAGTTGCCATGATGTAATAGGTTTCTAGAGCCACTTATGAGATACTATGCTTGTATGGAATTTCCATGTCTTAAAATTATATGTGCCTGTTAGTGTATAAACCTATGCTATAAAACATTTATGAATCTTACTGTTAGTGTATGAATCCATGGATGGAATGATTGTGAACTTTATTGATCTTGTACGATGAGTAGTGGTGACTCCCCTATGTTGGTTGGGTGTCCACAGGAGGTTGTGTTCCTTCGGGTTCACTAGAGGTTGTGTTCCTTTGGGTTCACTAGAGGTTGTGTTCCTTTGGGTACACCAGAGGTTTGCGTTCCTTCGGGATCACCAGAGGTAAGAGTCTCCTTCGGGGCTTACTAATGGTTTGTGGGCATCCATACCCAACGGTGGGGCGGGTCTAACCATTCCCTTATAGAAGTATGGCATATGATGGATATGCATGTCTCATGTTTGACACACTTAATGGACTTAGGTGCCTAGCCCGACTCCGGTAGTGGGGTTACTTACTGAGTAATATAATTACTCATCCTTTCCTCTTATATGTTTTTCAGGTAAAGGAAGGAATGTGTTGACGAATGACAAGAAGAATCCTTGACGGCATCACGGGACCCATAGCAGCTTCCGCTTAGTCTTGCATGTTTTACTGAAATTTCGTCAAACTGTCTAGTTTTATTTTGAGACTCGTCTCCCTATTTGTTTATGCTGATTTTCATTCATGAAGCTTCTTTTATTGTTTTCCTTAGGGGTACCCTGAACCAAAATTTCCTTTTATTTGTTATTGCGTTGATTTCTTGAATTAAAATAAGTAGAAATTTTCATGGAAAGCATGGGTTCTTCTTTACTATTCAGTATAGTGTCGTTCCTTCGAATTGTTGCATGCACTGAGTAATGGTCCGATTAGCTAGTGTTAGTCGGGTCGTTACATTTTTAATGATATTCATTCCAACTAAACTCTTGATTTCTATAGTCTTAAAGTCTTAAACCTATAAGAATTACACAAAAGATCAAAGGTAGTATTAACTAACATATATGATCATTATATGTTAGTTAATAGTGCACAAATTCGTCCAAATGATGCACACTTTGATAAAGTTGGTGAAATTAAAGGTTGTTTTAATGGCGCATCTTAATGCATCTCATCTAGATCTAAAAAAACCCAAAACTAGCTTCTCATTACATTTAAACCATCGATTTTTTGGAGCTTTCTTGGTTGAATTATGACCGAGACAAACTAATTAGTCCAAATAACGCACACTTTGAATTTAACAAATACCACAACTATAATGCACACCCATAATTTAACAAATAATCAACAAATTCGTCCAAATACCACAATCATAATCAACCTACTTCTCTAAATCAAGCACATATTAGTGAATACCACAACCATAATCAGAGAAAACATCAAATTAACTCATAGCAAGAAAAATTTAGAGAAATCTTACCTCAAGTAAATCAAATTCGTCCAAGCTTGGCCAAAACCCACAGATCTGGATTTGGGGAGAGCAAAGAGAGGGAGAGACCAACGAGATGGATAGACCGAAGAGAGCAAGAGACCGAGGAGATGGAGACGAGATCGAAGAAACACAGAGAGAAGAGAGGGAGAGAGCAACAAGATGTGAGATCGATGAAAGAGAGAGCGATGGAAGAGAGAGCGAAGAGAGGGAGAGGGATCGACGGAAGAGAGACCGATGGAAGAGAGAGCGAGGAAAGGGAGAGAGCAATGGCGAGAGTGAGATCGATCAGAAGGTGAAAGGGAGAGAGCAGTGGCCTATCGGATCTGGAGGAAGATGAAAGGGAAAGAAAACCAGGGTGTTTTATTTTTAGAATTGTCGACGCCATAAGTCAGGCGTCGACTAAGGTCACTTTATACCGATGCCATGTATTCCACCATCGGCAAAGACACAAATTTTTTAGGGTGTTGGCATTTTTTCTGTCTGCAAAAGCCCATTTTTGCGGATGGCAATAATCAACAGTCGACAGAAACCCCGATTTGCCGACGGGTAAAAAAGTAGCATCAACAAATACACCTTTCTGCTGACGGGTTAGTATAATAGTGTCGACATATGACCCTCTATGCCGATGCCTCATTTTTCATCGTCGGTATAGAGGGTTATTGTCGACGGTTCTTCGCACCATCGGTATAGTCACAATTTGTTGACGACCTTTTATAACGTCGGCATGACGTCCGTCAGTATAGCTAGATTTTCTTGTAGTGGTCTTCTTTCTTTTTGTTATAATCTATATACTTTAATTGAAGGGGGTAATTTTTTTTGATGAGATAAACAAAAGGTTAAATAGTTAACAAGAAAGAGAGTAGAAGGAGAGGAAATAGAGAAATGATAGGCCATAGATTGAAGTAGGAGAGAGAAAACATGTAAGAGGTAATGAGGTGTAGATAAAAAATAAGAGCATCTTAAACTTTTTTAAGTAAGGGTATTAATACAACTTTTGAAAGTTTATAGGTATTTATGCAACGAGATATTAACAATTTCTGTTCATATATTAACCGTAAGGGTAATTTTAAACTTTCAACGCTTTCTTAAGGTCTTTCTCTTTGTCTTTCTAGGAGTGTAAAGTTTTGTTGATGCATTCCTGTTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTTTGCAGGAATTCGTTGATAGCTCCGTACAAATTTACAATGGAAAAACTTCTGTTTGTTGTAAGATCACTAAAGGAAGGATTGGTCATAAATTTGGAGAGTTTGCTTCGACATGGAAACAAAGACTTTCAAGAAAAAATATTGGATTGGGAAAAAAAGGGTAA

mRNA sequence

ATGATTAAAGGAGGGGAAGGAATTAGGATTTATTATAAATCCTCCTCGTCGCCGCTCGCTTTCCCGGAAGTTGCACGCTCAGAATCACGCTCTCTCGCCCAGGATCTCGCTCTCTCGCTCGGACTCTCGCTCTTTCGCTCTCTTGCTTGGATTCTCGCTCTCTTGCTCTTGCTCAGAATCTCGCTCTCGGCTACGACTAATTGCTTGCCTGATCGTCAGTCACCGGATCAATATTCCCTAGGTGGTCGGCGATTACTTTGGTTCGTAGGATCGGAGGAAACTGCGAGTTTAGCCACGTTCGGGACTTTTGCGAGAGTTGCGGTGTGGTTAGCCTTATGGATCAACCTTCAGAGGTTGTGTTCCTTTGGGTTCACTAGAGGTTGTGTTCCTTTGGGTACACCAGAGGTTTGCGTTCCTTCGGGATCACCAGAGATCTGGATTTGGGGAGAGCAAAGAGAGGGAGAGACCAACGAGATGGATAGACCGAAGAGAGCAAGAGACCGAGGAGATGGAGACGAGATCGAAGAAACACAGAGAGAAGAGAGGGAGAGAGCAACAAGATGTGAGATCGATGAAAGAGAGAGCGATGGAAGAGAGAGCGAAGAGAGGGAGAGGGATCGACGGAAGAGAGACCGATGGAAGAGAGAGCGAGGAAAGGGAGAGAGCAATGGCGAGAGTGAGATCGATCAGAAGGTGAAAGGGAGAGAGCAGCGTCGACTAAGGTCACTTTATACCGATGCCATGTATTCCACCATCGGCAAAGACACAAATTTTTTAGGGTGTTGGCATTTTTTCTGTCTGCAAAAGCCCATTTTTGCGGATGGCAATAATCAACAGTCGACAGAAACCCCGATTTGCCGACGGTGTCGACATATGACCCTCTATGCCGATGCCTCATTTTTCATCGTCGGTATAGAGGGTTATTGTCGACGGTTCTTCGCACCATCGGAATTCGTTGATAGCTCCGTACAAATTTACAATGGAAAAACTTCTGTTTGTTGTAAGATCACTAAAGGAAGGATTGGTCATAAATTTGGAGAGTTTGCTTCGACATGGAAACAAAGACTTTCAAGAAAAAATATTGGATTGGGAAAAAAAGGGTAA

Coding sequence (CDS)

ATGATTAAAGGAGGGGAAGGAATTAGGATTTATTATAAATCCTCCTCGTCGCCGCTCGCTTTCCCGGAAGTTGCACGCTCAGAATCACGCTCTCTCGCCCAGGATCTCGCTCTCTCGCTCGGACTCTCGCTCTTTCGCTCTCTTGCTTGGATTCTCGCTCTCTTGCTCTTGCTCAGAATCTCGCTCTCGGCTACGACTAATTGCTTGCCTGATCGTCAGTCACCGGATCAATATTCCCTAGGTGGTCGGCGATTACTTTGGTTCGTAGGATCGGAGGAAACTGCGAGTTTAGCCACGTTCGGGACTTTTGCGAGAGTTGCGGTGTGGTTAGCCTTATGGATCAACCTTCAGAGGTTGTGTTCCTTTGGGTTCACTAGAGGTTGTGTTCCTTTGGGTACACCAGAGGTTTGCGTTCCTTCGGGATCACCAGAGATCTGGATTTGGGGAGAGCAAAGAGAGGGAGAGACCAACGAGATGGATAGACCGAAGAGAGCAAGAGACCGAGGAGATGGAGACGAGATCGAAGAAACACAGAGAGAAGAGAGGGAGAGAGCAACAAGATGTGAGATCGATGAAAGAGAGAGCGATGGAAGAGAGAGCGAAGAGAGGGAGAGGGATCGACGGAAGAGAGACCGATGGAAGAGAGAGCGAGGAAAGGGAGAGAGCAATGGCGAGAGTGAGATCGATCAGAAGGTGAAAGGGAGAGAGCAGCGTCGACTAAGGTCACTTTATACCGATGCCATGTATTCCACCATCGGCAAAGACACAAATTTTTTAGGGTGTTGGCATTTTTTCTGTCTGCAAAAGCCCATTTTTGCGGATGGCAATAATCAACAGTCGACAGAAACCCCGATTTGCCGACGGTGTCGACATATGACCCTCTATGCCGATGCCTCATTTTTCATCGTCGGTATAGAGGGTTATTGTCGACGGTTCTTCGCACCATCGGAATTCGTTGATAGCTCCGTACAAATTTACAATGGAAAAACTTCTGTTTGTTGTAAGATCACTAAAGGAAGGATTGGTCATAAATTTGGAGAGTTTGCTTCGACATGGAAACAAAGACTTTCAAGAAAAAATATTGGATTGGGAAAAAAAGGGTAA

Protein sequence

MIKGGEGIRIYYKSSSSPLAFPEVARSESRSLAQDLALSLGLSLFRSLAWILALLLLLRISLSATTNCLPDRQSPDQYSLGGRRLLWFVGSEETASLATFGTFARVAVWLALWINLQRLCSFGFTRGCVPLGTPEVCVPSGSPEIWIWGEQREGETNEMDRPKRARDRGDGDEIEETQREERERATRCEIDERESDGRESEERERDRRKRDRWKRERGKGESNGESEIDQKVKGREQRRLRSLYTDAMYSTIGKDTNFLGCWHFFCLQKPIFADGNNQQSTETPICRRCRHMTLYADASFFIVGIEGYCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKKG
Homology
[Close]
BLAST of CmUC11G212610 vs. NCBI nr
Match: YP_003587230.1 (ribosomal protein S19 [Citrullus lanatus] >ACV96650.1 ribosomal protein S19 [Citrullus lanatus])

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-14
Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKKG 367
           + RR     EFVDSSV+IYNGKTSV CKIT+GRIGHKFGEFAST K+RLSR NIG GKKG
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRIGHKFGEFASTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of CmUC11G212610 vs. NCBI nr
Match: YP_009913640.1 (ribosomal protein S19 [Luffa acutangula] >YP_009913653.1 ribosomal protein S19 [Luffa acutangula] >QLJ93027.1 ribosomal protein S19 [Luffa acutangula] >QLJ93028.1 ribosomal protein S19 [Luffa acutangula])

HSP 1 Score: 90.1 bits (222), Expect = 4.2e-14
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKKG 367
           + RR     EFVDSSV+IYNGKTSV CKIT+GR+GHKFGEFAST K+RLSR NIG GKKG
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of CmUC11G212610 vs. NCBI nr
Match: WP_131747057.1 (ribosomal protein S19 family protein [Candidatus Frankia meridionalis])

HSP 1 Score: 87.0 bits (214), Expect = 3.6e-13
Identity = 43/60 (71.67%), Postives = 49/60 (81.67%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKKG 367
           + RR     EFVD SV+IYNGKTSV CKIT+G++GHKFGEFAST K+RLSR NIG GKKG
Sbjct: 32  WSRRSSILPEFVDCSVRIYNGKTSVRCKITEGKVGHKFGEFASTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of CmUC11G212610 vs. NCBI nr
Match: YP_003587264.1 (ribosomal protein S19 [Citrullus lanatus] >ACV96651.1 ribosomal protein S19 [Citrullus lanatus])

HSP 1 Score: 85.5 bits (210), Expect = 1.0e-12
Identity = 43/60 (71.67%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKKG 367
           + RR     EFVDSSV+IYNGKT V CKIT+GR+GHKFGEFA T K+RLSR NIG GKKG
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTFVRCKITEGRVGHKFGEFALTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of CmUC11G212610 vs. NCBI nr
Match: YP_003587380.1 (ribosomal protein S19 [Cucurbita pepo] >ACV96694.1 ribosomal protein S19 [Cucurbita pepo])

HSP 1 Score: 83.6 bits (205), Expect = 4.0e-12
Identity = 42/59 (71.19%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKK 367
           + RR     EFVDSSV+IYNGKT V CKIT+GR+GHKFGEFA T K+RLSR NIG GKK
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTFVRCKITEGRVGHKFGEFALTRKRRLSRTNIGPGKK 90

[Close]
BLAST of CmUC11G212610 vs. ExPASy Swiss-Prot
Match: P27527 (Ribosomal protein S19, mitochondrial OS=Petunia hybrida OX=4102 GN=RPS19 PE=2 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 3.2e-12
Identity = 37/59 (62.71%), Postives = 44/59 (74.58%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKK 367
           + RR     EFVD  V+IYNGKT V CKIT+G++GHKFGEFA T K+R SR NIG G+K
Sbjct: 32  WSRRSSILPEFVDCFVRIYNGKTFVRCKITEGKVGHKFGEFAFTRKRRPSRTNIGPGRK 90

[Close]
BLAST of CmUC11G212610 vs. ExPASy Swiss-Prot
Match: P39697 (40S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS19 PE=1 SV=2)

HSP 1 Score: 63.2 bits (152), Expect = 7.3e-09
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRK 360
           + RR     E+VDS+V+IYNGKT V CKIT+G++GHKFGEFA T K +   K
Sbjct: 159 WSRRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210

[Close]
BLAST of CmUC11G212610 vs. ExPASy Swiss-Prot
Match: P26874 (Ribosomal protein S19, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS19 PE=3 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 6.4e-05
Identity = 29/59 (49.15%), Postives = 34/59 (57.63%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKK 367
           + RR     +FV    QIYNGK  V  KIT+  +GHKFGEFAST      RK   LGK+
Sbjct: 26  WSRRSCILPQFVGCYAQIYNGKGFVGLKITEEMVGHKFGEFAST------RKTSSLGKR 78

[Close]
BLAST of CmUC11G212610 vs. ExPASy TrEMBL
Match: D5I3A0 (Ribosomal protein S19 OS=Citrullus lanatus OX=3654 GN=rps19-1 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-14
Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKKG 367
           + RR     EFVDSSV+IYNGKTSV CKIT+GRIGHKFGEFAST K+RLSR NIG GKKG
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRIGHKFGEFASTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of CmUC11G212610 vs. ExPASy TrEMBL
Match: A0A7D6C0E4 (Ribosomal protein S19 OS=Luffa acutangula OX=56866 GN=rps19-2 PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-14
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKKG 367
           + RR     EFVDSSV+IYNGKTSV CKIT+GR+GHKFGEFAST K+RLSR NIG GKKG
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTSVRCKITEGRVGHKFGEFASTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of CmUC11G212610 vs. ExPASy TrEMBL
Match: D5I3D4 (Ribosomal protein S19 OS=Citrullus lanatus OX=3654 GN=rps19-2 PE=3 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.0e-13
Identity = 43/60 (71.67%), Postives = 48/60 (80.00%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKKG 367
           + RR     EFVDSSV+IYNGKT V CKIT+GR+GHKFGEFA T K+RLSR NIG GKKG
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTFVRCKITEGRVGHKFGEFALTRKRRLSRTNIGPGKKG 91

[Close]
BLAST of CmUC11G212610 vs. ExPASy TrEMBL
Match: D5I3F0 (Ribosomal protein S19 OS=Cucurbita pepo OX=3663 GN=rps19-1 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-12
Identity = 42/59 (71.19%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKK 367
           + RR     EFVDSSV+IYNGKT V CKIT+GR+GHKFGEFA T K+RLSR NIG GKK
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTFVRCKITEGRVGHKFGEFALTRKRRLSRTNIGPGKK 90

[Close]
BLAST of CmUC11G212610 vs. ExPASy TrEMBL
Match: D5I3G6 (Ribosomal protein S19 OS=Cucurbita pepo OX=3663 GN=rps19-2 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-12
Identity = 42/59 (71.19%), Postives = 47/59 (79.66%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRKNIGLGKK 367
           + RR     EFVDSSV+IYNGKT V CKIT+GR+GHKFGEFA T K+RLSR NIG GKK
Sbjct: 32  WSRRSSILPEFVDSSVRIYNGKTFVRCKITEGRVGHKFGEFALTRKRRLSRTNIGPGKK 90

[Close]
BLAST of CmUC11G212610 vs. TAIR 10
Match: AT5G47320.1 (ribosomal protein S19 )

HSP 1 Score: 63.2 bits (152), Expect = 5.2e-10
Identity = 30/52 (57.69%), Postives = 38/52 (73.08%), Query Frame = 0 

Query: 308 YCRRFFAPSEFVDSSVQIYNGKTSVCCKITKGRIGHKFGEFASTWKQRLSRK 360
           + RR     E+VDS+V+IYNGKT V CKIT+G++GHKFGEFA T K +   K
Sbjct: 159 WSRRSTILPEYVDSAVRIYNGKTHVRCKITEGKVGHKFGEFAFTRKVKKHAK 210

The following BLAST results are available for this feature:
BLAST of CmUC11G212610 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_003587230.13.2e-1476.67ribosomal protein S19 [Citrullus lanatus] >ACV96650.1 ribosomal protein S19 [Cit... [more]
YP_009913640.14.2e-1475.00ribosomal protein S19 [Luffa acutangula] >YP_009913653.1 ribosomal protein S19 [... [more]
WP_131747057.13.6e-1371.67ribosomal protein S19 family protein [Candidatus Frankia meridionalis][more]
YP_003587264.11.0e-1271.67ribosomal protein S19 [Citrullus lanatus] >ACV96651.1 ribosomal protein S19 [Cit... [more]
YP_003587380.14.0e-1271.19ribosomal protein S19 [Cucurbita pepo] >ACV96694.1 ribosomal protein S19 [Cucurb... [more]
BLAST of CmUC11G212610 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P275273.2e-1262.71Ribosomal protein S19, mitochondrial OS=Petunia hybrida OX=4102 GN=RPS19 PE=2 SV... [more]
P396977.3e-0957.6940S ribosomal protein S19, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RPS1... [more]
P268746.4e-0549.15Ribosomal protein S19, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS19 P... [more]
BLAST of CmUC11G212610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
D5I3A01.6e-1476.67Ribosomal protein S19 OS=Citrullus lanatus OX=3654 GN=rps19-1 PE=3 SV=1[more]
A0A7D6C0E42.0e-1475.00Ribosomal protein S19 OS=Luffa acutangula OX=56866 GN=rps19-2 PE=3 SV=1[more]
D5I3D45.0e-1371.67Ribosomal protein S19 OS=Citrullus lanatus OX=3654 GN=rps19-2 PE=3 SV=1[more]
D5I3F01.9e-1271.19Ribosomal protein S19 OS=Cucurbita pepo OX=3663 GN=rps19-1 PE=3 SV=1[more]
D5I3G61.9e-1271.19Ribosomal protein S19 OS=Cucurbita pepo OX=3663 GN=rps19-2 PE=3 SV=1[more]
BLAST of CmUC11G212610 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G47320.15.2e-1057.69ribosomal protein S19 [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002222Ribosomal protein S19/S15PFAMPF00203Ribosomal_S19coord: 305..353
e-value: 3.1E-10
score: 39.8
IPR002222Ribosomal protein S19/S15PANTHERPTHR11880RIBOSOMAL PROTEIN S19P FAMILY MEMBERcoord: 308..361
IPR023575Ribosomal protein S19/S15, superfamilyGENE3D3.30.860.1030s Ribosomal Protein S19; Chain Acoord: 276..362
e-value: 2.9E-11
score: 45.1
IPR023575Ribosomal protein S19/S15, superfamilySUPERFAMILY54570Ribosomal protein S19coord: 306..355
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..233
NoneNo IPR availablePANTHERPTHR11880:SF3640S RIBOSOMAL PROTEIN S19, MITOCHONDRIALcoord: 308..361
IPR020934Ribosomal protein S19 conserved sitePROSITEPS00323RIBOSOMAL_S19coord: 327..351

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC11G212610.1CmUC11G212610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome